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FFCP PHASE1:Mm9::chr4:86221572..86221593,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=68441
|EntrezGene=68441
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=Q80X95
|UniProt=Q80X95
|association_with_transcript=0bp_to_ENSMUST00000091064,NM_178376,uc008tlw.2_5end
|association_with_transcript=0bp_to_ENSMUST00000091064,NM_178376,uc008tlw.2_5end
|cluster_id=chr4:86221572..86221593,+
|description=CAGE_peak_2_at_Rraga_5end
|description=CAGE_peak_2_at_Rraga_5end
|id=chr4:86221572..86221593,+
|id=chr4:86221572..86221593,+
|ontology_enrichment_celltype=CL:0000117!4.05e-14!23;CL:0000337!4.05e-14!23;CL:0000055!1.36e-12!50;CL:0000393!4.19e-12!39;CL:0000211!4.19e-12!39;CL:0000221!8.96e-12!44;CL:0000133!8.96e-12!44;CL:0000540!1.82e-11!33;CL:0000047!1.82e-11!33;CL:0000031!1.82e-11!33;CL:0000404!1.82e-11!33;CL:0002319!1.90e-11!43
|ontology_enrichment_celltype=CL:0000117!4.05e-14!23;CL:0000337!4.05e-14!23;CL:0000055!1.36e-12!50;CL:0000393!4.19e-12!39;CL:0000211!4.19e-12!39;CL:0000221!8.96e-12!44;CL:0000133!8.96e-12!44;CL:0000540!1.82e-11!33;CL:0000047!1.82e-11!33;CL:0000031!1.82e-11!33;CL:0000404!1.82e-11!33;CL:0002319!1.90e-11!43
|ontology_enrichment_celltype_v019_2=CL:0000117,4.05e-14,23;CL:0000337,4.05e-14,23;CL:0000393,4.19e-12,39;CL:0000211,4.19e-12,39;CL:0000221,8.96e-12,44;CL:0000133,8.96e-12,44;CL:0000540,1.82e-11,33;CL:0000047,1.82e-11,33;CL:0000031,1.82e-11,33;CL:0000404,1.82e-11,33;CL:0002319,1.90e-11,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!2.17e-30!102;UBERON:0000924!2.17e-30!102;UBERON:0006601!2.17e-30!102;UBERON:0000033!1.49e-28!63;UBERON:0001017!9.85e-28!73;UBERON:0005743!9.85e-28!73;UBERON:0000073!1.26e-27!75;UBERON:0001016!1.26e-27!75;UBERON:0002346!1.41e-26!71;UBERON:0003075!1.41e-26!71;UBERON:0007284!1.41e-26!71;UBERON:0001049!1.41e-25!52;UBERON:0005068!1.41e-25!52;UBERON:0006241!1.41e-25!52;UBERON:0007135!1.41e-25!52;UBERON:0000955!1.06e-24!50;UBERON:0006238!1.06e-24!50;UBERON:0002616!2.94e-24!49;UBERON:0003056!2.02e-22!49;UBERON:0003080!4.40e-20!40;UBERON:0002780!2.39e-19!39;UBERON:0001890!2.39e-19!39;UBERON:0006240!2.39e-19!39;UBERON:0002020!4.66e-19!34;UBERON:0004111!6.00e-19!122;UBERON:0000153!4.69e-18!94;UBERON:0000025!8.88e-18!114;UBERON:0007811!5.79e-17!86;UBERON:0002791!1.69e-16!29;UBERON:0003528!1.69e-16!29;UBERON:0001893!1.69e-16!29;UBERON:0000475!1.09e-12!200;UBERON:0000956!2.42e-11!21;UBERON:0001869!2.42e-11!21;UBERON:0000203!2.42e-11!21;UBERON:0000483!3.16e-10!181;UBERON:0000119!3.57e-10!183;UBERON:0000477!1.56e-09!154;UBERON:0002619!1.92e-09!17;UBERON:0000468!6.03e-09!333
|ontology_enrichment_uberon_v019_2=UBERON:0010314,9.99e-32,92;UBERON:0004121,2.38e-30,95;UBERON:0000924,2.38e-30,95;UBERON:0006601,2.38e-30,95;UBERON:0001017,9.85e-28,73;UBERON:0001016,1.26e-27,75;UBERON:0002346,3.86e-27,64;UBERON:0003075,3.86e-27,64;UBERON:0007284,3.86e-27,64;UBERON:0000073,4.47e-27,54;UBERON:0010371,8.18e-27,73;UBERON:0001049,1.41e-25,52;UBERON:0005068,1.41e-25,52;UBERON:0006241,1.41e-25,52;UBERON:0007135,1.41e-25,52;UBERON:0000955,1.56e-22,47;UBERON:0006238,1.56e-22,47;UBERON:0003056,2.02e-22,49;UBERON:0002616,4.22e-22,46;UBERON:0003080,4.40e-20,40;UBERON:0002780,2.39e-19,39;UBERON:0001890,2.39e-19,39;UBERON:0006240,2.39e-19,39;UBERON:0002020,4.66e-19,34;UBERON:0004111,6.00e-19,122;UBERON:0000025,8.88e-18,114;UBERON:0003528,1.69e-16,29;UBERON:0002791,1.69e-16,29;UBERON:0001893,1.69e-16,29;UBERON:0000956,2.42e-11,21;UBERON:0001869,2.42e-11,21;UBERON:0000203,2.42e-11,21;UBERON:0000483,1.26e-09,174;UBERON:0000119,1.43e-09,176;UBERON:0002619,1.92e-09,17;UBERON:0000922,6.56e-07,320
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9915,13.8246836251906,20.072476417389,18.9975430459175,15.1048067950999,13.9684340175818,16.2288684030098,15.8130267415987,18.0188400795208,9.01908701894705,15.4002042425298,15.5530981029672,16.139448632556,15.37001899385,18.247261553004,11.9704383418669,12.4996209450192,8.38874755405687,7.9722759872582,13.8254403003775,16.4325782726653,13.3798642091508,14.6876668745703,14.0314488816019,11.2786818270513,10.1327490938445,12.1397404015169,12.4059202826645,14.5391687925333,13.793432004555,14.3173182894314,12.2796929732088,11.8340565217605,13.9083513596067,25.3938029649037,8.65745218158852,9.06109951755704,8.562115434568,21.2508553435409,14.2638681342898,11.9048555773722,17.5782070844834,12.0377304968487,34.4498623996411,31.302116082488,34.9466263198032,34.7143428334249,32.1988784292202,35.5035131773159,33.7511250115903,32.8734478353681,39.87653199061,28.9945774581019,17.64384908931,18.3551441764474,18.9514302387089,16.7743634777123,17.1882793354945,16.3620722520513,16.4462578573195,12.3621034343337,17.0087181083662,11.6240717411347,14.9552786935241,12.449338531481,15.3572072250607,14.7898102055248,15.9670603696605,20.9569224164552,14.0220034393275,17.9405575031246,16.8955219329356,12.8063060516926,10.9718160763333,16.1502983604997,12.8755542571553,11.482366913954,13.7399695406383,17.261380009902,14.6342378298218,13.1534855718921,11.5433496768983,8.41713407486608,14.1175671567767,15.6622126977146,11.4584692087513,18.127610418758,16.397061933397,18.2361721894701,20.5859815431959,14.396360621236,21.2330048596416,18.5296792060393,22.02744438394
|phase1_expression=23.0614339830903,8.72438519098403,6.82498859084304,2.41971369045464,2.00358291978539,8.89760141133016,5.37309073369709,10.4589891987677,7.180224829735,6.55380673701582,17.1217968225505,13.0826340752352,9.41604014621631,11.8891747289836,3.66420737997229,5.06188168474565,6.99561878128147,9.93705820878449,8.91243818437302,10.1853516431527,15.0526623567394,5.16312946244604,3.91799683708403,7.83962871687693,9.40578052375397,8.6134794617253,7.32295393470427,10.1271479362368,9.88121781173144,10.5852654499171,9.5344119581781,2.54012269383853,1.84519436275371,0,9.53210345179206,9.47537478543406,6.53341940039581,14.2300754450549,12.5013655123808,12.5645698553712,14.7057872007754,12.9778642142105,9.71020706062307,26.1865381389201,22.1001710058542,19.4559557291382,12.5182615095686,19.6222640742402,21.7489320907127,28.1923353657711,17.358316281545,24.4379359420452,3.18786951509699,3.62681071005672,4.03312558970957,14.663787854049,14.6132054368766,22.17389996793,45.5212036934095,46.5512061759389,37.3960528068646,17.958760199664,11.5608323494448,8.09909745553259,6.92206453796882,8.5257613793532,14.3808053048834,13.4476406862544,29.8626083448416,28.351247049655,28.8145197051393,28.2794474559766,31.1424642741775,36.8697305637012,31.4373144939815,25.7381260250806,66.0695285996332,41.1153228634304,41.7809770456982,45.2369966914565,40.2545631850602,37.5057626800867,55.8365998002762,48.3975844627245,44.3114918552749,32.4091444021034,30.8946547334053,37.2798891650601,19.6888102666279,14.2830248601825,11.5945795480671,24.0918685554788,7.47968467078526,18.3499085156858,12.3457519315057,9.85659151614138,18.2577746171277,12.7822741933543,12.7295142255406,12.7202246823722,22.6757905840456,10.2661181931454,7.64415719119937,14.2213340630666,17.9687564039308,15.9616715249312,13.6491600153991,11.9893073705013,10.0985774622397,20.6334573300106,13.7053408145247,17.354532263792,15.681853813412,16.2780451796832,14.4634109776917,19.4783216560997,10.8765785803125,13.5923395504717,8.84610551949874,17.6325866442676,12.1462835153216,9.21262980956922,5.59175283654366,31.9131068742586,32.4642395560855,10.7291963187608,5.63131085177825,3.59941638596045,5.33694953706872,52.7263050704976,37.972550033946,40.0837383240037,40.3272422846081,43.9830586608169,40.5186686891142,39.5868681885329,17.6182099461047,12.5651040316194,14.9106427475868,19.5710925974421,19.6481868873683,26.2088399054159,19.2666478891724,21.8521985861787,19.5945117555824,21.5231050078548,21.6450983732974,22.5071932542944,18.3232793992916,16.2631228944325,20.0584281546902,23.8923348346057,28.360819421011,15.6713474934975,20.9897779136102,15.723707078661,7.02213187313235,4.37491442095016,6.53576048609863,14.9130556225561,17.8239805585633,16.9258337773354,11.3637473080901,17.9055450890137,20.8260602397961,21.6256568617879,22.534965717568,23.4698338158011,23.6966183875412,29.8784784623953,23.1856795301147,28.5089975479398,26.5655639502171,30.4648570586044,35.1184214102093,26.9610084433725,6.27795687669216,9.25576983322405,14.2903127858607,12.0763069367428,9.53619213783491,9.88249270654378,12.2307924114679,11.0330863145284,10.4396393539793,9.38784041926862,11.8127548136127,5.17286827306992,11.5028811400281,3.59527763461689,11.0230405436094,8.96135729644652,18.587454293402,15.3093006897037,13.5249282807697,14.6628956048626,14.1585315632367,14.307707257625,15.4297150583188,16.5323365737154,19.7818397080132,21.4711065223933,17.4907049981418,6.00642380577939,8.05891879964132,7.19558759631532,5.47722327748958,7.95884627182976,7.89340140522401,6.04161888646702,8.43103179230184,7.96228098245436,18.6898668485561,10.0478055870496,13.7296576170407,25.0053089167641,21.3482922091076,14.473305640901,17.3667998756608,15.5382957651798,12.711268162478,15.6165478913173,14.3161051455986,15.5780819420889,15.9489239393629,14.6350235893349,14.5024332577696,15.5025282754142,15.9454768657487,16.2224681568581,18.3046080777849,17.6471851469444,4.52373851817817,4.35124547054968,9.83528546038072,14.6246475541508,47.5229746363864,48.0567915028033,24.754176751878,27.5193310652767,17.0374438484779,11.7131623288992,15.9413314322271,15.2940030689633,13.590719119026,11.889214293131,19.02610297872,15.4895604692995,17.7879500075936,26.0270266301664,14.0520684356186,14.9575107080494,15.6371480979433,14.5173708215831,7.96470830039777,12.1390318077491,16.0231485191318,17.5402724172985,12.1073776081117,12.604841065701,11.8877014857382,12.3601468022352,14.9728898921583,14.2216541071117,16.8669773719998,9.28219889233682,31.3204437293485,24.3082476942269,20.568030721458,18.2186479776853,18.6207245324387,17.658512942605,23.5305099461033,19.1812917942198,11.7335854031855,9.53244318887191,12.1290618930229,15.1695352706162,18.5684090700291,20.2651427758604,18.2639686324799,15.2651036762907,8.16146342563582,43.3895206704593,5.29699730473343,9.90656966223468,8.70414278637645,6.40452753815949,6.28793447516716,8.46479240864134,9.00885678967433,5.318155188299,5.38979897837253,21.9574242143476,11.3880957689209,12.8091264289915,13.8246836251906,20.072476417389,18.9975430459175,15.1048067950999,13.9684340175818,16.2288684030098,15.8130267415987,18.0188400795208,9.01908701894705,15.4002042425298,15.5530981029672,16.139448632556,15.37001899385,18.247261553004,11.9704383418669,12.4996209450192,8.38874755405687,7.9722759872582,13.8254403003775,16.4325782726653,13.3798642091508,14.6876668745703,14.0314488816019,11.2786818270513,10.1327490938445,12.1397404015169,12.4059202826645,14.5391687925333,13.793432004555,14.3173182894314,12.2796929732088,11.8340565217605,13.9083513596067,25.3938029649037,8.65745218158852,9.06109951755704,8.562115434568,21.2508553435409,14.2638681342898,11.9048555773722,17.5782070844834,12.0377304968487,34.4498623996411,31.302116082488,34.9466263198032,34.7143428334249,32.1988784292202,35.5035131773159,33.7511250115903,32.8734478353681,39.87653199061,28.9945774581019,17.64384908931,18.3551441764474,18.9514302387089,16.7743634777123,17.1882793354945,16.3620722520513,16.4462578573195,12.3621034343337,17.0087181083662,11.6240717411347,14.9552786935241,12.449338531481,15.3572072250607,14.7898102055248,15.9670603696605,20.9569224164552,14.0220034393275,17.9405575031246,16.8955219329356,12.8063060516926,10.9718160763333,16.1502983604997,12.8755542571553,11.482366913954,13.7399695406383,17.261380009902,14.6342378298218,13.1534855718921,11.5433496768983,8.41713407486608,14.1175671567767,15.6622126977146,11.4584692087513,18.127610418758,16.397061933397,18.2361721894701,20.5859815431959,14.396360621236,21.2330048596416,18.5296792060393,22.02744438394
|short_description=p2@Rraga
|short_description=p2@Rraga
}}
}}

Latest revision as of 06:19, 27 September 2015

Short description:p2@Rraga
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rraga_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 0bp_to_ENSMUST00000091064, NM_178376, uc008tlw.2_5end
EntrezGene:Rraga
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p2@Rraga

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G723.06
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I58.72
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I66.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.42
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I78.90
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.37
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E910.46
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E77.18
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F26.55
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E617.12
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F113.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E49.42
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E811.89
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.06
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A57.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A29.94
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A48.91
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A610.19
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A315.05
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H25.16
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.92
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D17.84
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D29.41
GP2+ M cell, pool1.CNhs13228.11845-124H98.61
GP2+ M cell, pool2.CNhs13231.11846-124I17.32
GP2+ M cell, pool3.CNhs13240.11847-124I210.13
Ileum epithelium, pool1.CNhs13199.10252-104B99.88
Ileum epithelium, pool2.CNhs13232.10253-104C110.59
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C89.53
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F59.53
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F69.48
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G814.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H112.50
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H312.56
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G914.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H212.98
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H49.71
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D826.19
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D922.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B319.46
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B712.52
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C219.62
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B821.75
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C328.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C417.36
Mouse Astrocytes, donor3.CNhs12107.11633-122C424.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.19
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.03
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C114.66
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E114.61
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C522.17
Mouse Granule cells, donor1.CNhs12131.11713-123C345.52
Mouse Granule cells, donor2.CNhs12357.11731-123E346.55
Mouse Granule cells, donor3.CNhs12108.11636-122C737.40
Mouse Meningeal cells, donor1.CNhs12132.11716-123C617.96
Mouse Meningeal cells, donor3.CNhs12109.11639-122D111.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C78.10
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E76.92
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D28.53
Mouse Microglia, donor1.CNhs12629.11718-123C814.38
Mouse Microglia, donor2.CNhs12634.11736-123E813.45
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D529.86
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F528.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D928.81
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F128.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D531.14
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D236.87
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F231.44
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D625.74
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D366.07
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F341.12
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D741.78
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D445.24
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F440.25
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D837.51
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E455.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E548.40
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I644.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D632.41
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F630.89
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E137.28
Mouse Schwann, donor1.CNhs12507.11728-123D919.69
Mouse Schwann, donor2.CNhs12573.11746-123F914.28
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G311.59
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F724.09
Mouse hepatocyte, donor1.CNhs13078.11714-123C47.48
Mouse hepatocyte, donor3.CNhs12615.11637-122C818.35
Mouse hepatocyte, donor6.CNhs13090.11822-124F412.35
Mouse hepatocyte, donor8.CNhs13091.11824-124F69.86
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A718.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I712.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E312.73
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I812.72
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G622.68
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H110.27
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G117.97
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G215.96
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G313.65
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B611.99
accessory axillary lymph node, adult.CNhs10475.1063-29H910.10
adrenal gland, adult.CNhs10508.49-24D720.63
adrenal gland, embryo E14.CNhs11038.406-44C513.71
adrenal gland, embryo E16.CNhs11004.1254-43D617.35
adrenal gland, embryo E17.CNhs11043.1263-45I115.68
adrenal gland, embryo E18.CNhs11026.1262-18F516.28
adrenal gland, neonate N00.CNhs11191.1311-23C114.46
adrenal gland, neonate N25.CNhs11223.1377-27I319.48
amnion, adult pregnant day17.5.CNhs10488.583-22A810.88
aorta, adult.CNhs10498.46-23H113.59
bone (os femoris), adult.CNhs10483.56-12G28.85
bone (os femoris), neonate N02.CNhs11227.1985-43F517.63
bone (os femoris), neonate N16.CNhs11225.1525-43A612.15
bone (os femoris), neonate N20.CNhs11195.1350-25C39.21
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B231.91
cerebellum, neonate N30.CNhs11135.1395-42I232.46
colon, adult.CNhs10468.36-18H710.73
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.63
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D45.34
corpora quadrigemina, adult.CNhs10501.16-22A452.73
corpus striatum, adult.CNhs10487.19-21D837.97
corpus striatum, neonate N00.CNhs11226.630-43F140.08
cortex, adult.CNhs10473.12-14D540.33
cortex, neonate N30.CNhs11107.1392-42F243.98
diencephalon, adult.CNhs10482.20-12F240.52
diencephalon, neonate N30.CNhs11201.1388-42B239.59
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B117.62
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A212.57
epididymis, adult.CNhs10490.58-23B214.91
eyeball, adult.CNhs10484.31-12G419.57
eyeball, embryo E12.CNhs11016.345-16C619.65
eyeball, embryo E14.CNhs10521.399-16E226.21
eyeball, embryo E15.CNhs10593.426-16C919.27
eyeball, embryo E17.CNhs11023.1261-18D421.85
eyeball, neonate N00.CNhs11207.633-15C619.59
eyeball, neonate N01.CNhs11140.1532-43E721.52
eyeball, neonate N02.CNhs11205.1551-44G821.65
eyeball, neonate N16.CNhs11188.777-19A222.51
forelimb, embryo E11.CNhs10596.335-25E218.32
forelimb, embryo E12.CNhs10600.359-14H216.26
forelimb, embryo E13.CNhs10589.384-1E220.06
forelimb, embryo E14.CNhs10577.413-26A823.89
forelimb, embryo E15.CNhs11007.437-20E728.36
forelimb, embryo E17.CNhs10598.1517-43C415.67
forelimb, embryo E18.CNhs11008.1520-43B520.99
gonad, embryo E13.CNhs11044.1564-45I615.72
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C87.02
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.37
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D56.54
heart, embryo E11.CNhs10586.331-24E914.91
heart, embryo E12.CNhs11015.353-12F517.82
heart, embryo E13.CNhs11013.376-3I916.93
heart, embryo E14.CNhs10597.403-26D411.36
heart, embryo E15.CNhs11017.431-16C817.91
heart, embryo E16.CNhs11021.457-17C620.83
heart, embryo E17.CNhs11025.479-18E521.63
heart, embryo E18.CNhs11030.1283-20G322.53
heart, neonate N00.CNhs11213.639-21E323.47
heart, neonate N03.CNhs11221.1349-25I223.70
heart, neonate N10.CNhs11118.749-24G129.88
heart, neonate N16.CNhs11209.782-15G123.19
heart, neonate N20.CNhs11127.821-26I628.51
heart, neonate N25.CNhs11196.1351-25D326.57
heart, neonate N30.CNhs11202.1390-42D230.46
hippocampus, adult.CNhs10478.13-16E835.12
hippocampus, neonate N00.CNhs11228.627-43G126.96
intestinal mucosa, adult.CNhs10506.860-29I36.28
intestine, adult.CNhs10496.178-9A39.26
intestine, embryo E12.CNhs11019.1251-16I514.29
intestine, embryo E13.CNhs11010.381-16D512.08
intestine, embryo E15.CNhs10602.976-16D89.54
intestine, embryo E16.CNhs10585.463-22H49.88
intestine, embryo E17.CNhs10582.482-18D312.23
intestine, embryo E18.CNhs10526.1289-20F711.03
intestine, neonate N00.CNhs11126.644-26D110.44
intestine, neonate N01.CNhs11192.1322-23E99.39
intestine, neonate N06.CNhs11102.688-20B811.81
intestine, neonate N07.CNhs11095.720-20F25.17
intestine, neonate N10.CNhs11098.755-23A511.50
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E311.02
intestine, neonate N30.CNhs11131.1384-42G18.96
kidney, embryo E14.CNhs10606.411-4I918.59
kidney, embryo E15.CNhs10997.434-16F815.31
kidney, embryo E16.CNhs10584.464-22A513.52
kidney, embryo E17.CNhs11028.483-18I214.66
kidney, embryo E18.CNhs11001.1288-20C714.16
kidney, neonate N00.CNhs11214.646-21G714.31
kidney, neonate N10.CNhs11206.758-6D515.43
kidney, neonate N20.CNhs11113.832-19I116.53
kidney, neonate N25.CNhs11122.1353-25F319.78
kidney, neonate N30.CNhs11203.1385-42H121.47
liver, adult pregnant day01.CNhs10466.508-5B217.49
liver, embryo E12.CNhs10601.355-15F86.01
liver, embryo E13.CNhs10524.378-3H68.06
liver, embryo E14.CNhs10594.409-16E17.20
liver, embryo E15.CNhs10520.433-16D75.48
liver, embryo E16.CNhs10523.462-17F57.96
liver, embryo E17.CNhs10510.481-18A37.89
liver, embryo E18.CNhs10579.499-43G46.04
liver, neonate N00.CNhs11117.641-24F48.43
liver, neonate N03.CNhs11123.1345-25G27.96
liver, neonate N06.CNhs11101.684-20A818.69
liver, neonate N07.CNhs11103.716-20H210.05
liver, neonate N10.CNhs11115.751-24B913.73
liver, neonate N20.CNhs11220.823-25A325.01
liver, neonate N25.CNhs11198.1368-26H121.35
liver, neonate N30.CNhs11106.1382-42D114.47
lung, adult.CNhs10474.28-22B117.37
lung, embryo E12.CNhs10522.354-16G215.54
lung, embryo E14.CNhs10604.404-26F812.71
lung, embryo E15.CNhs11020.432-17C515.62
lung, embryo E16.CNhs10998.458-17B614.32
lung, embryo E17.CNhs10605.480-44A615.58
lung, embryo E18.CNhs10583.1287-20I615.95
lung, neonate N00.CNhs11224.640-42C614.64
lung, neonate N06.CNhs11212.683-20E514.50
lung, neonate N07.CNhs11111.715-19A315.50
lung, neonate N10.CNhs11219.750-23E615.95
lung, neonate N20.CNhs11109.822-18A416.22
lung, neonate N25.CNhs11119.1359-25C718.30
lung, neonate N30.CNhs11133.1394-42H217.65
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14.35
mammary gland, adult lactating day02.CNhs10480.595-22B69.84
mammary gland, adult pregnant day19.CNhs10476.588-5H214.62
medulla oblongata, adult.CNhs10477.17-12C247.52
medulla oblongata, neonate N30.CNhs11200.1396-42A348.06
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C724.75
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C227.52
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E117.04
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E211.71
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E315.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D715.29
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D813.59
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D911.89
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D419.03
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D515.49
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D617.79
olfactory brain, adult.CNhs10489.18-22I926.03
ovary, adult.CNhs10507.91-2I714.05
ovary, embryo E18.CNhs11040.505-44H714.96
ovary, neonate N00.CNhs11217.1299-22I415.64
oviduct, adult pregnant day01.CNhs10500.988-6G614.52
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F412.14
pancreas, embryo E15.CNhs11042.1556-45F216.02
pancreas, embryo E16.CNhs11003.460-26E517.54
pancreas, embryo E17.CNhs10599.1558-45G312.11
pancreas, embryo E18.CNhs10580.1535-43I712.60
pancreas, neonate N00.CNhs11105.645-26G911.89
pancreas, neonate N01.CNhs11138.1531-43D712.36
pancreas, neonate N02.CNhs11139.1539-43D814.97
pancreas, neonate N16.CNhs11136.787-43B614.22
pancreas, neonate N25.CNhs11094.1555-45E216.87
pancreas, neonate N30.CNhs11182.1548-44H59.28
pituitary gland, adult.CNhs10493.21-1G831.32
pituitary gland, embryo E12.CNhs11018.346-16E624.31
pituitary gland, embryo E13.CNhs11009.370-44C720.57
pituitary gland, embryo E14.CNhs11037.398-44A518.22
pituitary gland, embryo E15.CNhs10592.427-16B918.62
pituitary gland, embryo E16.CNhs11036.449-43F617.66
pituitary gland, embryo E17.CNhs11039.1265-44F523.53
pituitary gland, neonate N00.CNhs11190.1308-22E919.18
placenta, adult pregnant day10.CNhs10472.539-13I711.73
placenta, adult pregnant day17.CNhs10464.577-18G39.53
prostate, adult.CNhs10470.859-1F812.13
skin, adult.CNhs10492.30-1C315.17
skin, neonate N00.CNhs11124.650-25G418.57
skin, neonate N03.CNhs11215.662-22H320.27
skin, neonate N06.CNhs11097.693-20I518.26
skin, neonate N10.CNhs11108.762-6C415.27
small intestine, neonate N16.CNhs11114.790-21I18.16
spinal cord, adult.CNhs10505.24-13C943.39
spleen, adult.CNhs10465.25-2G25.30
spleen, embryo E16.CNhs11035.461-43C19.91
spleen, embryo E18.CNhs11011.1271-21F28.70
spleen, neonate N10.CNhs11116.752-24D16.40
spleen, neonate N20.CNhs11112.824-19H16.29
spleen, neonate N25.CNhs11099.1354-25G38.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C69.01
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.32
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D35.39
stomach, adult.CNhs10503.33-1H621.96
stomach, embryo E12.CNhs10588.356-43E311.39
stomach, embryo E15.CNhs10603.1252-16G812.81
stomach, embryo E16.CNhs11022.459-17D413.82
stomach, embryo E17.CNhs11006.1035-18D520.07
stomach, embryo E18.CNhs10999.1286-20C619.00
stomach, neonate N03.CNhs11193.1340-24B815.10
stomach, neonate N07.CNhs11210.718-18A913.97
stomach, neonate N25.CNhs11104.1355-25E416.23
stomach, neonate N30.CNhs11134.1386-42I115.81
submandibular gland, adult.CNhs10469.59-29C118.02
testis, adult.CNhs10504.57-7G59.02
testis, embryo E13.CNhs11031.389-23F515.40
testis, embryo E15.CNhs11034.443-27C515.55
testis, embryo E16.CNhs11033.470-26G516.14
testis, embryo E17.CNhs11029.486-18I515.37
testis, embryo E18.CNhs11027.503-18G518.25
testis, neonate N00.CNhs11189.1300-22B711.97
testis, neonate N07.CNhs11222.726-26I412.50
testis, neonate N10.CNhs11204.763-44D98.39
testis, neonate N20.CNhs11110.839-18H37.97
testis, neonate N30.CNhs11130.1391-42E213.83
thymus, adult.CNhs10471.38-12B516.43
thymus, embryo E14.CNhs11041.402-44I413.38
thymus, embryo E15.CNhs11005.430-45I214.69
thymus, embryo E16.CNhs11002.456-26C514.03
thymus, embryo E17.CNhs10581.478-18C111.28
thymus, embryo E18.CNhs10595.1273-19G410.13
thymus, neonate N02.CNhs11181.1541-43F812.14
thymus, neonate N03.CNhs11137.2104-43C712.41
thymus, neonate N06.CNhs11197.681-26C414.54
thymus, neonate N07.CNhs11211.713-19D313.79
thymus, neonate N10.CNhs11194.748-24E414.32
thymus, neonate N20.CNhs11186.820-7A212.28
thymus, neonate N25.CNhs11125.1362-25G711.83
thymus, neonate N30.CNhs11132.1393-42G213.91
tongue, adult.CNhs10499.32-1B425.39
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H38.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F79.06
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G58.56
urinary bladder, adult.CNhs10481.879-12E421.25
uterus, adult pregnant day19.CNhs10497.590-15F514.26
uterus, adult.CNhs10509.92-27E511.90
vagina, adult.CNhs10502.89-27D517.58
vesicular gland, adult.CNhs10491.51-27F812.04
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A134.45
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A231.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A334.95
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D734.71
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A432.20
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A535.50
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A633.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A732.87
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A839.88
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A928.99
whole body, embryo E11.CNhs11014.324-5I817.64
whole body, embryo E12.CNhs10587.857-27C918.36
whole body, embryo E13.CNhs10512.372-23H218.95
whole body, embryo E14.5.CNhs10578.420-27D216.77
whole body, embryo E14.CNhs10519.395-14B117.19
whole body, embryo E16.CNhs10514.453-14F216.36
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G516.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G512.36
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G517.01
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G511.62
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G514.96
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G512.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G515.36
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G514.79
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G515.97
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G520.96
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G514.02
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G517.94
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G516.90
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G512.81
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G510.97
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G516.15
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G512.88
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G511.48
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G513.74
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G517.26
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G514.63
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G513.15
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G511.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G58.42
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G514.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G515.66
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G511.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G518.13
whole body, embryo E17.5.CNhs10513.490-9F916.40
whole body, embryo E17.CNhs10517.475-3I518.24
whole body, embryo E18.CNhs10516.493-3B320.59
whole body, neonate N00.CNhs10525.657-19C214.40
whole body, neonate N01.CNhs10576.659-23C621.23
whole body, neonate N06.CNhs10515.692-21D118.53
whole body, neonate N10.CNhs10518.761-6B422.03





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.05e-1423
neuroblast (sensu Vertebrata)4.05e-1423
electrically responsive cell4.19e-1239
electrically active cell4.19e-1239
ectodermal cell8.96e-1244
neurectodermal cell8.96e-1244
neuron1.82e-1133
neuronal stem cell1.82e-1133
neuroblast1.82e-1133
electrically signaling cell1.82e-1133
neural cell1.90e-1143

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest9.99e-3292
ectoderm-derived structure2.38e-3095
ectoderm2.38e-3095
presumptive ectoderm2.38e-3095
central nervous system9.85e-2873
nervous system1.26e-2775
neurectoderm3.86e-2764
neural plate3.86e-2764
presumptive neural plate3.86e-2764
regional part of nervous system4.47e-2754
ecto-epithelium8.18e-2773
neural tube1.41e-2552
neural rod1.41e-2552
future spinal cord1.41e-2552
neural keel1.41e-2552
brain1.56e-2247
future brain1.56e-2247
pre-chordal neural plate2.02e-2249
regional part of brain4.22e-2246
anterior neural tube4.40e-2040
regional part of forebrain2.39e-1939
forebrain2.39e-1939
future forebrain2.39e-1939
gray matter4.66e-1934
anatomical conduit6.00e-19122
tube8.88e-18114
brain grey matter1.69e-1629
regional part of telencephalon1.69e-1629
telencephalon1.69e-1629
cerebral cortex2.42e-1121
cerebral hemisphere2.42e-1121
pallium2.42e-1121
epithelium1.26e-09174
cell layer1.43e-09176
regional part of cerebral cortex1.92e-0917
embryo6.56e-07320
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