FFCP PHASE1:Mm9::chr18:43484001..43484018,-: Difference between revisions
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{{FFCP|EntrezGene=22240|HGNC=|MCL_coexpression_id=1716|UniProt=|association_with_transcript=-317bp_to_ENSMUST00000135547_5end|description=CAGE_peak_13_at_Dpysl3_5end|id=chr18:43484001..43484018,-|ontology_enrichment_celltype=CL:0000540!6.34e-16!33;CL:0000047!6.34e-16!33;CL:0000031!6.34e-16!33;CL:0000404!6.34e-16!33;CL:0000393!3.69e-14!39;CL:0000211!3.69e-14!39;CL:0002319!6.50e-14!43;CL:0000221!3.16e-13!44;CL:0000133!3.16e-13!44;CL:0000055!3.39e-12!50;CL:0000117!3.90e-11!23;CL:0000337!3.90e-11!23;CL:0000107!4.57e-07!9|ontology_enrichment_celltype_v019_2=CL:0000540,4.23e-36,33;CL:0000047,4.23e-36,33;CL:0000031,4.23e-36,33;CL:0000404,4.23e-36,33;CL:0000393,2.57e-32,39;CL:0000211,2.57e-32,39;CL:0000117,1.68e-26,23;CL:0000337,1.68e-26,23;CL:0002319,2.88e-26,43;CL:0000221,1.57e-25,44;CL:0000133,1.57e-25,44;CL:0002321,3.38e-15,70;CL:0002609,4.98e-14,6;CL:0000723,2.23e-12,91;CL:0000048,2.23e-12,91;CL:0000107,1.46e-11,9;CL:0000034,3.31e-11,97;CL:0002612,4.31e-08,3;CL:0000120,4.54e-08,3;CL:0002613,4.54e-08,3;CL:0002608,5.61e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!7.73e-11!75;UBERON:0001016!7.73e-11!75;UBERON:0001017!1.81e-10!73;UBERON:0005743!1.81e-10!73;UBERON:0004121!1.48e-09!102;UBERON:0000924!1.48e-09!102;UBERON:0006601!1.48e-09!102;UBERON:0002346!1.69e-08!71;UBERON:0003075!1.69e-08!71;UBERON:0007284!1.69e-08!71;UBERON:0000010!4.38e-07!11;UBERON:0002410!4.57e-07!9;UBERON:0002020!4.74e-07!34|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.91e-17,73;UBERON:0001016,1.27e-16,75;UBERON:0002020,4.09e-16,34;UBERON:0004121,8.56e-13,95;UBERON:0000924,8.56e-13,95;UBERON:0006601,8.56e-13,95;UBERON:0001948,1.42e-11,5;UBERON:0002315,1.42e-11,5;UBERON:0002410,1.46e-11,9;UBERON:0002346,6.71e-11,64;UBERON:0003075,6.71e-11,64;UBERON:0007284,6.71e-11,64;UBERON:0002240,1.42e-09,6;UBERON:0005174,1.42e-09,6;UBERON:0001137,1.42e-09,6;UBERON:0010314,1.66e-09,92;UBERON:0000010,2.95e-09,11;UBERON:0003528,3.28e-09,29;UBERON:0002791,3.28e-09,29;UBERON:0001893,3.28e-09,29;UBERON:0001049,4.40e-09,52;UBERON:0005068,4.40e-09,52;UBERON:0006241,4.40e-09,52;UBERON:0007135,4.40e-09,52;UBERON:0010371,6.23e-09,73;UBERON:0000073,1.35e-08,54;UBERON:0002257,4.31e-08,3;UBERON:0000369,4.86e-08,5;UBERON:0002435,4.86e-08,5;UBERON:0000204,4.86e-08,5;UBERON:0010082,4.86e-08,5;UBERON:0000013,7.28e-08,3;UBERON:0010313,4.26e-07,3;UBERON:0002342,4.26e-07,3;UBERON:0002005,4.26e-07,3;UBERON:0005428,4.26e-07,3;UBERON:0005062,4.26e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.550640256485045,0,0.218025156380447,0,0,0.55994568650145,0,0,0,0,2.05807548828758,0,0,3.23706337375356,15.869729378161,5.07065122804943,0.338844532069132,1.77858959222228,0,0,0,0.599200221036809,0.384218305321555,3.21437798156281,5.53524347159932,2.3135745748652,1.71390590642282,1.54607978666129,3.55223317723367,5.55903731905771,4.5960939330501,0,0.383062014255563,0,4.3522474950964,10.7955419450843,3.64639359389732,0.558365998002762,0,0.30559649555362,5.59794312399969,5.12538050876771,4.28718725398191,0.151452386666368,0.68014404096107,0.289864488701678,0,0,0,0,0,0.280888840263504,0,1.03914401841148,0.35333957451034,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0.608930956624282,0.230615497256059,0.301445281105245,0.470354828542819,0,0,0.289198713839823,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0.149790639404823,0,3.39266750704734,0.173824320192276,0,0.41557608911912,0,0.407357455401265,0.124406970610093,0,0,0,1.14951052216736,0.900310649026746,0.753524089178575,0.204109497453984,0.768682321709099,0.468508622798644,0.258703370739016,0.215567992932842,0.189106080167819,0,0,0.556094498451196,1.0447564995665,0.205782136407943,0.199034266818493,0,0,0,0.828503090142008,1.17263029990548,1.2604344302271,0.946978942340841,0.983821158737019,0.925602677324269,1.62773761325285,0.804820204198858,0.350296027101508,0.16455984991348,0.164167464079095,0,0.146199987425332,0.219550115291051,0.402619256281115,0,2.16099685996497,0,0,0.639864751605702,0.696710015581316,0.38660238396628,0,0.667134131534611,0.190225626112559,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0.814605311381257,0,0,0.126473074248515,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0.184753190166605,0.37898282354097,0,0.339490171550376,0,0,0,0,0,0,0.478364305972461,0.163863314715738,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0.327869890753351,0,1.26203287766503,2.73307121007647,2.58508077279359,1.91175038362042,0.891194696329576,0.566153061577665,1.61924280669958,7.3063964477828,6.32460444714438,0,0.283880170416537,0.35613120733451,0,0,0,0.242780636154981,0,0,0,0,0,0.727067458955011,0,0,0,0,0,0.36012218806262,0.517434735131018,0.214337035031592,0,0.178368817602071,0.493647061806363,0,0,0,0,0,0,0,0.238744688006273,0.164140899745061,0,0.556275906031529,0,0.412773735926445,0.185194527369712,0,0,0.228778173206523,0,0,0,0,1.26534397432454,0.609958401380546,0.324016022465404,0,0.436725127492355,0.269728692769641,0.165306911450672,0,0,0,1.12738587736838,0,0,0.194451188344048,0.516639293910924,0.844780627453891,0,0.13020438484395,0.104859344425711,0,0.288030006257865,0,0.405450430580328,0,0,0,0.198681354781265,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0.965947970160952,0.187682475451182,0.183151624267265,0,0,1.6942555278512,0.920650473014354,0.572895513439397,0.171853182343688,0,0,0,0,0.453142408984205,0,0.415149390336707,0.798049746802062,0.341467211508268,0.972426868273176,0.209613162627982,0.367687016900028,1.11123363900808,1.03017528619447,1.28367683836726,0.505394423527595,0.760437899670719,0.565879024158229,0.187283014939765,0.320125762024346,0.229741875822453,0,0.347652977834566,0.77163688185482,0.412085900803307,0.441596760403192,0,0.887379030796687,0.476872379894642,0.145346416632329,0.376437521661322,0.761531471025089,0.365855945745545,0.526139422875686,0.543216455383447,0,0.474540072496697,0.394017929502254,0,0.154936841185966,0.192906610981141,0.999242311751784,0,0.429742108096597,1.14772999241306,0.661774257358546,0|short_description=p13@Dpysl3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=22240 | |||
|HGNC= | |||
|MCL_coexpression_id=1716 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-317bp_to_ENSMUST00000135547_5end | |||
|cluster_id=chr18:43484001..43484018,- | |||
|description=CAGE_peak_13_at_Dpysl3_5end | |||
|id=chr18:43484001..43484018,- | |||
|ontology_enrichment_celltype=CL:0000540!6.34e-16!33;CL:0000047!6.34e-16!33;CL:0000031!6.34e-16!33;CL:0000404!6.34e-16!33;CL:0000393!3.69e-14!39;CL:0000211!3.69e-14!39;CL:0002319!6.50e-14!43;CL:0000221!3.16e-13!44;CL:0000133!3.16e-13!44;CL:0000055!3.39e-12!50;CL:0000117!3.90e-11!23;CL:0000337!3.90e-11!23;CL:0000107!4.57e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.23e-36,33;CL:0000047,4.23e-36,33;CL:0000031,4.23e-36,33;CL:0000404,4.23e-36,33;CL:0000393,2.57e-32,39;CL:0000211,2.57e-32,39;CL:0000117,1.68e-26,23;CL:0000337,1.68e-26,23;CL:0002319,2.88e-26,43;CL:0000221,1.57e-25,44;CL:0000133,1.57e-25,44;CL:0002321,3.38e-15,70;CL:0002609,4.98e-14,6;CL:0000723,2.23e-12,91;CL:0000048,2.23e-12,91;CL:0000107,1.46e-11,9;CL:0000034,3.31e-11,97;CL:0002612,4.31e-08,3;CL:0000120,4.54e-08,3;CL:0002613,4.54e-08,3;CL:0002608,5.61e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.73e-11!75;UBERON:0001016!7.73e-11!75;UBERON:0001017!1.81e-10!73;UBERON:0005743!1.81e-10!73;UBERON:0004121!1.48e-09!102;UBERON:0000924!1.48e-09!102;UBERON:0006601!1.48e-09!102;UBERON:0002346!1.69e-08!71;UBERON:0003075!1.69e-08!71;UBERON:0007284!1.69e-08!71;UBERON:0000010!4.38e-07!11;UBERON:0002410!4.57e-07!9;UBERON:0002020!4.74e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.91e-17,73;UBERON:0001016,1.27e-16,75;UBERON:0002020,4.09e-16,34;UBERON:0004121,8.56e-13,95;UBERON:0000924,8.56e-13,95;UBERON:0006601,8.56e-13,95;UBERON:0001948,1.42e-11,5;UBERON:0002315,1.42e-11,5;UBERON:0002410,1.46e-11,9;UBERON:0002346,6.71e-11,64;UBERON:0003075,6.71e-11,64;UBERON:0007284,6.71e-11,64;UBERON:0002240,1.42e-09,6;UBERON:0005174,1.42e-09,6;UBERON:0001137,1.42e-09,6;UBERON:0010314,1.66e-09,92;UBERON:0000010,2.95e-09,11;UBERON:0003528,3.28e-09,29;UBERON:0002791,3.28e-09,29;UBERON:0001893,3.28e-09,29;UBERON:0001049,4.40e-09,52;UBERON:0005068,4.40e-09,52;UBERON:0006241,4.40e-09,52;UBERON:0007135,4.40e-09,52;UBERON:0010371,6.23e-09,73;UBERON:0000073,1.35e-08,54;UBERON:0002257,4.31e-08,3;UBERON:0000369,4.86e-08,5;UBERON:0002435,4.86e-08,5;UBERON:0000204,4.86e-08,5;UBERON:0010082,4.86e-08,5;UBERON:0000013,7.28e-08,3;UBERON:0010313,4.26e-07,3;UBERON:0002342,4.26e-07,3;UBERON:0002005,4.26e-07,3;UBERON:0005428,4.26e-07,3;UBERON:0005062,4.26e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.550640256485045,0,0.218025156380447,0,0,0.55994568650145,0,0,0,0,2.05807548828758,0,0,3.23706337375356,15.869729378161,5.07065122804943,0.338844532069132,1.77858959222228,0,0,0,0.599200221036809,0.384218305321555,3.21437798156281,5.53524347159932,2.3135745748652,1.71390590642282,1.54607978666129,3.55223317723367,5.55903731905771,4.5960939330501,0,0.383062014255563,0,4.3522474950964,10.7955419450843,3.64639359389732,0.558365998002762,0,0.30559649555362,5.59794312399969,5.12538050876771,4.28718725398191,0.151452386666368,0.68014404096107,0.289864488701678,0,0,0,0,0,0.280888840263504,0,1.03914401841148,0.35333957451034,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0.608930956624282,0.230615497256059,0.301445281105245,0.470354828542819,0,0,0.289198713839823,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0.149790639404823,0,3.39266750704734,0.173824320192276,0,0.41557608911912,0,0.407357455401265,0.124406970610093,0,0,0,1.14951052216736,0.900310649026746,0.753524089178575,0.204109497453984,0.768682321709099,0.468508622798644,0.258703370739016,0.215567992932842,0.189106080167819,0,0,0.556094498451196,1.0447564995665,0.205782136407943,0.199034266818493,0,0,0,0.828503090142008,1.17263029990548,1.2604344302271,0.946978942340841,0.983821158737019,0.925602677324269,1.62773761325285,0.804820204198858,0.350296027101508,0.16455984991348,0.164167464079095,0,0.146199987425332,0.219550115291051,0.402619256281115,0,2.16099685996497,0,0,0.639864751605702,0.696710015581316,0.38660238396628,0,0.667134131534611,0.190225626112559,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0.814605311381257,0,0,0.126473074248515,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0.184753190166605,0.37898282354097,0,0.339490171550376,0,0,0,0,0,0,0.478364305972461,0.163863314715738,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0.327869890753351,0,1.26203287766503,2.73307121007647,2.58508077279359,1.91175038362042,0.891194696329576,0.566153061577665,1.61924280669958,7.3063964477828,6.32460444714438,0,0.283880170416537,0.35613120733451,0,0,0,0.242780636154981,0,0,0,0,0,0.727067458955011,0,0,0,0,0,0.36012218806262,0.517434735131018,0.214337035031592,0,0.178368817602071,0.493647061806363,0,0,0,0,0,0,0,0.238744688006273,0.164140899745061,0,0.556275906031529,0,0.412773735926445,0.185194527369712,0,0,0.228778173206523,0,0,0,0,1.26534397432454,0.609958401380546,0.324016022465404,0,0.436725127492355,0.269728692769641,0.165306911450672,0,0,0,1.12738587736838,0,0,0.194451188344048,0.516639293910924,0.844780627453891,0,0.13020438484395,0.104859344425711,0,0.288030006257865,0,0.405450430580328,0,0,0,0.198681354781265,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0.965947970160952,0.187682475451182,0.183151624267265,0,0,1.6942555278512,0.920650473014354,0.572895513439397,0.171853182343688,0,0,0,0,0.453142408984205,0,0.415149390336707,0.798049746802062,0.341467211508268,0.972426868273176,0.209613162627982,0.367687016900028,1.11123363900808,1.03017528619447,1.28367683836726,0.505394423527595,0.760437899670719,0.565879024158229,0.187283014939765,0.320125762024346,0.229741875822453,0,0.347652977834566,0.77163688185482,0.412085900803307,0.441596760403192,0,0.887379030796687,0.476872379894642,0.145346416632329,0.376437521661322,0.761531471025089,0.365855945745545,0.526139422875686,0.543216455383447,0,0.474540072496697,0.394017929502254,0,0.154936841185966,0.192906610981141,0.999242311751784,0,0.429742108096597,1.14772999241306,0.661774257358546,0 | |||
|short_description=p13@Dpysl3 | |||
}} |
Latest revision as of 07:06, 27 September 2015
Short description: | p13@Dpysl3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_Dpysl3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1716 |
Association with transcript: | -317bp_to_ENSMUST00000135547_5end |
EntrezGene: | Dpysl3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.23e-36 | 33 |
neuronal stem cell | 4.23e-36 | 33 |
neuroblast | 4.23e-36 | 33 |
electrically signaling cell | 4.23e-36 | 33 |
electrically responsive cell | 2.57e-32 | 39 |
electrically active cell | 2.57e-32 | 39 |
CNS neuron (sensu Vertebrata) | 1.68e-26 | 23 |
neuroblast (sensu Vertebrata) | 1.68e-26 | 23 |
neural cell | 2.88e-26 | 43 |
ectodermal cell | 1.57e-25 | 44 |
neurectodermal cell | 1.57e-25 | 44 |
embryonic cell | 3.38e-15 | 70 |
neuron of cerebral cortex | 4.98e-14 | 6 |
somatic stem cell | 2.23e-12 | 91 |
multi fate stem cell | 2.23e-12 | 91 |
autonomic neuron | 1.46e-11 | 9 |
stem cell | 3.31e-11 | 97 |
neuron of the ventral spinal cord | 4.31e-08 | 3 |
granule cell | 4.54e-08 | 3 |
striatum neuron | 4.54e-08 | 3 |
hippocampal neuron | 5.61e-08 | 3 |