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FFCP PHASE1:Mm9::chr15:98593626..98593651,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=11842
|EntrezGene=11842
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=P61205
|UniProt=P61205
|association_with_transcript=0bp_to_ENSMUST00000053183,ENSMUST00000129354_5end
|association_with_transcript=0bp_to_ENSMUST00000053183,ENSMUST00000129354_5end
|cluster_id=chr15:98593626..98593651,-
|description=CAGE_peak_2_at_Arf3_5end
|description=CAGE_peak_2_at_Arf3_5end
|id=chr15:98593626..98593651,-
|id=chr15:98593626..98593651,-
|ontology_enrichment_celltype=CL:0000117!1.03e-11!23;CL:0000337!1.03e-11!23;CL:0000221!3.81e-10!44;CL:0000133!3.81e-10!44;CL:0002319!6.59e-10!43;CL:0000055!1.61e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000117,1.03e-11,23;CL:0000337,1.03e-11,23;CL:0000221,3.81e-10,44;CL:0000133,3.81e-10,44;CL:0002319,6.59e-10,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.06e-24!75;UBERON:0001016!1.06e-24!75;UBERON:0001017!3.24e-24!73;UBERON:0005743!3.24e-24!73;UBERON:0001049!4.23e-24!52;UBERON:0005068!4.23e-24!52;UBERON:0006241!4.23e-24!52;UBERON:0007135!4.23e-24!52;UBERON:0000955!1.96e-23!50;UBERON:0006238!1.96e-23!50;UBERON:0002616!1.01e-22!49;UBERON:0004121!8.52e-22!102;UBERON:0000924!8.52e-22!102;UBERON:0006601!8.52e-22!102;UBERON:0000033!9.91e-19!63;UBERON:0002020!1.74e-18!34;UBERON:0003080!1.37e-17!40;UBERON:0002346!2.10e-17!71;UBERON:0003075!2.10e-17!71;UBERON:0007284!2.10e-17!71;UBERON:0002780!5.60e-17!39;UBERON:0001890!5.60e-17!39;UBERON:0006240!5.60e-17!39;UBERON:0002791!9.11e-16!29;UBERON:0003528!9.11e-16!29;UBERON:0001893!9.11e-16!29;UBERON:0003056!1.80e-13!49;UBERON:0000956!1.95e-11!21;UBERON:0001869!1.95e-11!21;UBERON:0000203!1.95e-11!21;UBERON:0002619!4.19e-10!17;UBERON:0007811!8.91e-08!86;UBERON:0002021!2.05e-07!10;UBERON:0000411!2.05e-07!10;UBERON:0001950!2.05e-07!10;UBERON:0003076!3.94e-07!12;UBERON:0003057!3.94e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.14e-25,54;UBERON:0001016,1.06e-24,75;UBERON:0001017,3.24e-24,73;UBERON:0001049,4.23e-24,52;UBERON:0005068,4.23e-24,52;UBERON:0006241,4.23e-24,52;UBERON:0007135,4.23e-24,52;UBERON:0004121,1.73e-21,95;UBERON:0000924,1.73e-21,95;UBERON:0006601,1.73e-21,95;UBERON:0000955,2.64e-21,47;UBERON:0006238,2.64e-21,47;UBERON:0002616,1.32e-20,46;UBERON:0002020,1.74e-18,34;UBERON:0003080,1.37e-17,40;UBERON:0010371,1.77e-17,73;UBERON:0002346,2.03e-17,64;UBERON:0003075,2.03e-17,64;UBERON:0007284,2.03e-17,64;UBERON:0002780,5.60e-17,39;UBERON:0001890,5.60e-17,39;UBERON:0006240,5.60e-17,39;UBERON:0003528,9.11e-16,29;UBERON:0002791,9.11e-16,29;UBERON:0001893,9.11e-16,29;UBERON:0003056,1.80e-13,49;UBERON:0000956,1.95e-11,21;UBERON:0001869,1.95e-11,21;UBERON:0000203,1.95e-11,21;UBERON:0002619,4.19e-10,17;UBERON:0010314,1.14e-09,92;UBERON:0002021,2.05e-07,10;UBERON:0000411,2.05e-07,10;UBERON:0001950,2.05e-07,10;UBERON:0003076,3.94e-07,12;UBERON:0003057,3.94e-07,12
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84326065659,9.82714991268003,10.0446779323242,8.4964538222437,10.4969888771177,14.9200886930897,13.4799572223465,8.07741107013003,23.1114104860518,12.7089064137382,13.0712207461107,20.6118259644691,18.3406949338378,16.726656423587,11.0315804327009,14.0620735631466,14.5754488751738,16.6693043369944,17.2818003754719,5.05617793005085,10.9471616256689,9.44940805916411,8.31493267057888,7.16106782669926,7.74857283646933,6.12996792551841,7.08909730437971,4.74542314756294,5.02964923922999,5.34378781225255,4.0932309910696,5.77271049841977,3.03879945672079,12.923631866067,6.21560669447381,6.36968381927277,9.23365390002431,16.4211154927362,14.8269155606434,15.3847364384503,19.0787857380369,9.02829787263654,70.0292284845163,67.2074845300478,72.184834693364,57.9145224498227,48.6408589037156,56.6545423042275,70.8773625243396,68.4488228900815,43.0485288534994,63.6845183454738,10.586309453586,9.57659696162474,9.04888110496911,8.0225216632537,13.4152424081909,15.4428547098012,8.00088220085815,8.65347240403356,9.30665707816264,10.3605856823157,12.1670063947315,10.7517014590063,10.2069243142172,12.0367286521154,11.8891420738119,11.4310485907938,10.3137050090921,11.1887347868949,10.3021475200827,9.27353196846703,8.22886205724997,12.7782580434723,10.9680647375768,7.70336008151341,7.62285981364178,10.0691383391095,10.9756783723664,11.8381370147029,10.0495044245938,3.92799590160417,12.2194068667899,8.96390789617628,11.867700251921,11.9301367713194,12.1531164918119,18.485982767408,8.88940112092552,9.45432637812513,6.88637995447836,10.1472052794977,6.02856372613096
|phase1_expression=12.8119077683835,24.7772539423946,20.9299650119187,20.8700305801713,17.0304548181758,12.255186849568,7.94282978024787,3.35720640948098,5.77233760821834,6.55380673701582,2.05461561870606,3.35043067780413,3.59521532855532,3.3219752919219,2.33176833270964,1.82227740650843,0.699561878128147,3.3123527362615,3.01651753932625,5.51706547337439,30.2754112937808,6.85107563286109,4.70159620450084,5.91971964335605,8.48814339948529,25.2662064210609,16.7997178502039,16.3758136841276,14.4417798786844,17.1380488236753,9.5344119581781,5.08024538767705,3.07532393792285,0,7.79899373328441,7.14808975041517,5.51257261908397,14.2300754450549,7.813353445238,12.5645698553712,14.7057872007754,15.7100461540443,16.0218416500281,12.8414754335089,12.8748702648783,26.6142790634438,32.8604364626176,20.2763395433815,24.3851662835264,27.2201858703997,25.3375423141906,38.8131923785423,4.36234775750115,4.35217285206807,2.68875039313971,6.94600477297057,7.73640287834643,10.3134418455488,32.5729501983952,24.3335850465135,30.4239073682966,26.7687180334614,35.5717918444456,44.0950861467885,41.5323872278129,48.3126478163348,39.247614477911,44.1851051119788,17.0050964185903,20.1158848114219,15.984697062705,60.2723577092026,54.9962666969518,19.1085646775328,25.0156679357597,25.7381260250806,62.7660521696516,81.592209036435,77.5712992944029,27.0366889846897,39.2481991054337,26.5665818983948,65.0496387673218,60.7783618834214,66.008843039582,40.3641162098925,44.7047077709183,30.0103107778734,13.4792624133068,17.2303157043471,3.76823835312181,4.30211938490693,5.439770669662,10.7940638327563,5.19821133958135,6.72040330646003,12.4995533917259,19.9403477416328,15.846946280775,16.9602995764963,16.3378366940949,8.98285341900225,35.6727335589304,56.8853362522665,9.52560580449342,9.37431502257865,6.0662933401774,12.3318590096585,6.47344709117929,17.813056687779,9.54169297213747,10.3518262626128,11.761390360059,13.565037649736,11.0533384707563,15.3313241422204,19.7755974187499,10.7003524120735,8.84610551949874,7.60304194752823,6.8460870722722,7.75800405016355,7.45567044872489,31.034764483224,41.0515545354372,13.0283098156382,3.23500836165985,3.59941638596045,3.68503658511888,58.8677212860953,109.80014467647,33.6753663662477,95.4295517855598,101.263321102811,67.3233264372975,66.3566765947129,11.8133662066367,7.58882520721567,10.3616330957807,12.2056276414155,8.84819012146385,9.42598628177239,7.74267158163002,9.0422890701429,9.25296388458059,6.66191345481219,10.9631017734883,10.6068382002996,10.5628316537093,10.4008344092301,7.38994721488585,9.42541649438572,8.61946472599353,9.75106066262066,10.906453229621,12.3401245427466,4.21327912387941,6.17634977075316,5.96743348730745,9.52778553663309,7.50483391939508,8.4629168886677,7.57583153872673,6.68998387941173,9.41029388613007,6.97601834251224,8.04820204198858,6.18856314545998,7.07607354627966,5.41752631461014,5.75588547775576,4.9707995724613,6.36695334344047,5.77087600669599,108.089033561961,25.8290577072004,14.2080076683033,11.3713743665324,10.4511242762265,7.43157349953403,10.6959992897337,9.88249270654378,8.67274370994994,13.1255682017666,11.3886974770683,10.3760341476127,11.0587491872119,9.74886713001639,9.94316844307513,9.88701349519644,13.400559092231,11.7493351220077,9.10405924574792,10.0538691096561,14.6520056375005,11.2008230314923,11.4431967428899,10.1696938840962,11.8884689793604,13.1373031701846,13.6588893221996,9.62497878590044,4.15033677922008,7.34118465150814,4.91397487783007,4.72210436008193,5.27436315610108,4.10001171579109,6.11102044275408,6.61701116136864,3.89124544260085,3.84385978463314,18.6898668485561,6.32639611036456,9.36113019343682,5.05157755894223,5.9201146462231,6.75420929908714,13.4869828821621,5.49525094134406,10.2667935158476,8.48725428875941,7.04070744865506,10.0503754465089,10.9500074807566,12.0982861671835,10.2462843669024,7.0868700687608,11.1618338060241,11.9620219742489,11.3972088031491,12.2951699794285,13.5712155545345,10.3342079925555,12.2941068254759,11.313406598494,52.8211441059836,43.4855357257074,15.9016897015375,4.79694761688309,5.99465616890888,5.46614242015294,9.04778270477756,9.55875191810208,7.79795359288379,10.190755108398,8.50102473517278,8.76767573733936,7.11518000303742,69.4054043471103,15.8972895433261,18.16269157406,13.6825045857004,17.3218629121162,13.2745138339963,7.76898035695941,9.67435382287203,10.9390946258421,15.651000322681,11.6825356218692,12.1461297789064,11.6330793432802,11.4079161083111,7.58488219045958,8.4334886859999,15.470331487228,33.0226417581174,10.443543453816,11.9009989080134,13.9319072770535,12.0591358876746,11.7723419617367,16.29035303961,13.700922710157,8.21350978222986,5.2958017715955,11.467476698858,13.3557864882599,8.07322133479528,10.3738230876428,14.2053089363732,13.6236946788401,9.03590593552537,46.7271761066484,5.63873906632914,10.5257302661243,5.92622487583077,3.76736914009382,3.2806614653046,3.66045077130436,3.22959016988325,4.61839792668071,5.38979897837253,8.59203556213602,12.1789357528737,10.5726122905961,8.7484326065659,9.82714991268003,10.0446779323242,8.4964538222437,10.4969888771177,14.9200886930897,13.4799572223465,8.07741107013003,23.1114104860518,12.7089064137382,13.0712207461107,20.6118259644691,18.3406949338378,16.726656423587,11.0315804327009,14.0620735631466,14.5754488751738,16.6693043369944,17.2818003754719,5.05617793005085,10.9471616256689,9.44940805916411,8.31493267057888,7.16106782669926,7.74857283646933,6.12996792551841,7.08909730437971,4.74542314756294,5.02964923922999,5.34378781225255,4.0932309910696,5.77271049841977,3.03879945672079,12.923631866067,6.21560669447381,6.36968381927277,9.23365390002431,16.4211154927362,14.8269155606434,15.3847364384503,19.0787857380369,9.02829787263654,70.0292284845163,67.2074845300478,72.184834693364,57.9145224498227,48.6408589037156,56.6545423042275,70.8773625243396,68.4488228900815,43.0485288534994,63.6845183454738,10.586309453586,9.57659696162474,9.04888110496911,8.0225216632537,13.4152424081909,15.4428547098012,8.00088220085815,8.65347240403356,9.30665707816264,10.3605856823157,12.1670063947315,10.7517014590063,10.2069243142172,12.0367286521154,11.8891420738119,11.4310485907938,10.3137050090921,11.1887347868949,10.3021475200827,9.27353196846703,8.22886205724997,12.7782580434723,10.9680647375768,7.70336008151341,7.62285981364178,10.0691383391095,10.9756783723664,11.8381370147029,10.0495044245938,3.92799590160417,12.2194068667899,8.96390789617628,11.867700251921,11.9301367713194,12.1531164918119,18.485982767408,8.88940112092552,9.45432637812513,6.88637995447836,10.1472052794977,6.02856372613096
|short_description=p2@Arf3
|short_description=p2@Arf3
}}
}}

Latest revision as of 13:17, 1 October 2015

Short description:p2@Arf3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Arf3_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000053183, ENSMUST00000129354_5end
EntrezGene:Arf3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Arf3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G712.81
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I524.78
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I620.93
CD326+ enterocyte, pool1.CNhs13542.11848-124I320.87
CD326+ enterocyte, pool2.CNhs13197.11849-124I417.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I712.26
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I87.94
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.36
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E75.77
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F26.55
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.05
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.35
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.60
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.32
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.82
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.31
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.02
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.52
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A330.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H26.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.70
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D15.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D28.49
GP2+ M cell, pool1.CNhs13228.11845-124H925.27
GP2+ M cell, pool2.CNhs13231.11846-124I116.80
GP2+ M cell, pool3.CNhs13240.11847-124I216.38
Ileum epithelium, pool1.CNhs13199.10252-104B914.44
Ileum epithelium, pool2.CNhs13232.10253-104C117.14
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C89.53
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F57.80
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F67.15
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G814.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H17.81
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H312.56
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G914.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H215.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H416.02
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D812.84
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D912.87
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B326.61
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B732.86
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C220.28
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B824.39
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C327.22
Mouse Astrocytes, donor2.CNhs12078.11552-120C425.34
Mouse Astrocytes, donor3.CNhs12107.11633-122C438.81
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.36
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I94.35
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.69
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C16.95
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E17.74
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C510.31
Mouse Granule cells, donor1.CNhs12131.11713-123C332.57
Mouse Granule cells, donor2.CNhs12357.11731-123E324.33
Mouse Granule cells, donor3.CNhs12108.11636-122C730.42
Mouse Meningeal cells, donor1.CNhs12132.11716-123C626.77
Mouse Meningeal cells, donor3.CNhs12109.11639-122D135.57
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C744.10
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E741.53
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D248.31
Mouse Microglia, donor1.CNhs12629.11718-123C839.25
Mouse Microglia, donor2.CNhs12634.11736-123E844.19
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D517.01
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F520.12
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D915.98
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F160.27
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D555.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D219.11
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F225.02
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D625.74
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D362.77
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F381.59
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D777.57
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D427.04
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F439.25
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D826.57
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E465.05
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E560.78
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I666.01
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D640.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F644.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E130.01
Mouse Schwann, donor1.CNhs12507.11728-123D913.48
Mouse Schwann, donor2.CNhs12573.11746-123F917.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.77
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C45.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C810.79
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.20
Mouse hepatocyte, donor8.CNhs13091.11824-124F66.72
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A712.50
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I719.94
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E315.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I816.96
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G616.34
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H18.98
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I835.67
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B656.89
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G19.53
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G29.37
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G36.07
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B612.33
accessory axillary lymph node, adult.CNhs10475.1063-29H96.47
adrenal gland, adult.CNhs10508.49-24D717.81
adrenal gland, embryo E14.CNhs11038.406-44C59.54
adrenal gland, embryo E16.CNhs11004.1254-43D610.35
adrenal gland, embryo E17.CNhs11043.1263-45I111.76
adrenal gland, embryo E18.CNhs11026.1262-18F513.57
adrenal gland, neonate N00.CNhs11191.1311-23C111.05
adrenal gland, neonate N25.CNhs11223.1377-27I315.33
amnion, adult pregnant day17.5.CNhs10488.583-22A819.78
aorta, adult.CNhs10498.46-23H110.70
bone (os femoris), adult.CNhs10483.56-12G28.85
bone (os femoris), neonate N02.CNhs11227.1985-43F57.60
bone (os femoris), neonate N16.CNhs11225.1525-43A66.85
bone (os femoris), neonate N20.CNhs11195.1350-25C37.76
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B231.03
cerebellum, neonate N30.CNhs11135.1395-42I241.05
colon, adult.CNhs10468.36-18H713.03
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.69
corpora quadrigemina, adult.CNhs10501.16-22A458.87
corpus striatum, adult.CNhs10487.19-21D8109.80
corpus striatum, neonate N00.CNhs11226.630-43F133.68
cortex, adult.CNhs10473.12-14D595.43
cortex, neonate N30.CNhs11107.1392-42F2101.26
diencephalon, adult.CNhs10482.20-12F267.32
diencephalon, neonate N30.CNhs11201.1388-42B266.36
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B111.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A27.59
epididymis, adult.CNhs10490.58-23B210.36
eyeball, adult.CNhs10484.31-12G412.21
eyeball, embryo E12.CNhs11016.345-16C68.85
eyeball, embryo E14.CNhs10521.399-16E29.43
eyeball, embryo E15.CNhs10593.426-16C97.74
eyeball, embryo E17.CNhs11023.1261-18D49.04
eyeball, neonate N00.CNhs11207.633-15C69.25
eyeball, neonate N01.CNhs11140.1532-43E76.66
eyeball, neonate N02.CNhs11205.1551-44G810.96
eyeball, neonate N16.CNhs11188.777-19A210.61
forelimb, embryo E11.CNhs10596.335-25E210.56
forelimb, embryo E12.CNhs10600.359-14H210.40
forelimb, embryo E13.CNhs10589.384-1E27.39
forelimb, embryo E14.CNhs10577.413-26A89.43
forelimb, embryo E15.CNhs11007.437-20E78.62
forelimb, embryo E17.CNhs10598.1517-43C49.75
forelimb, embryo E18.CNhs11008.1520-43B510.91
gonad, embryo E13.CNhs11044.1564-45I612.34
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.21
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D26.18
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D55.97
heart, embryo E11.CNhs10586.331-24E99.53
heart, embryo E12.CNhs11015.353-12F57.50
heart, embryo E13.CNhs11013.376-3I98.46
heart, embryo E14.CNhs10597.403-26D47.58
heart, embryo E15.CNhs11017.431-16C86.69
heart, embryo E16.CNhs11021.457-17C69.41
heart, embryo E17.CNhs11025.479-18E56.98
heart, embryo E18.CNhs11030.1283-20G38.05
heart, neonate N00.CNhs11213.639-21E36.19
heart, neonate N03.CNhs11221.1349-25I27.08
heart, neonate N10.CNhs11118.749-24G15.42
heart, neonate N16.CNhs11209.782-15G15.76
heart, neonate N20.CNhs11127.821-26I64.97
heart, neonate N25.CNhs11196.1351-25D36.37
heart, neonate N30.CNhs11202.1390-42D25.77
hippocampus, adult.CNhs10478.13-16E8108.09
hippocampus, neonate N00.CNhs11228.627-43G125.83
intestinal mucosa, adult.CNhs10506.860-29I314.21
intestine, adult.CNhs10496.178-9A311.37
intestine, embryo E12.CNhs11019.1251-16I510.45
intestine, embryo E13.CNhs11010.381-16D57.43
intestine, embryo E15.CNhs10602.976-16D810.70
intestine, embryo E16.CNhs10585.463-22H49.88
intestine, embryo E17.CNhs10582.482-18D38.67
intestine, embryo E18.CNhs10526.1289-20F713.13
intestine, neonate N00.CNhs11126.644-26D111.39
intestine, neonate N01.CNhs11192.1322-23E910.38
intestine, neonate N06.CNhs11102.688-20B811.06
intestine, neonate N07.CNhs11095.720-20F29.75
intestine, neonate N10.CNhs11098.755-23A59.94
intestine, neonate N20.CNhs11187.827-18D19.89
intestine, neonate N25.CNhs11121.1352-25E313.40
intestine, neonate N30.CNhs11131.1384-42G111.75
kidney, embryo E14.CNhs10606.411-4I99.10
kidney, embryo E15.CNhs10997.434-16F810.05
kidney, embryo E16.CNhs10584.464-22A514.65
kidney, embryo E17.CNhs11028.483-18I211.20
kidney, embryo E18.CNhs11001.1288-20C711.44
kidney, neonate N00.CNhs11214.646-21G710.17
kidney, neonate N10.CNhs11206.758-6D511.89
kidney, neonate N20.CNhs11113.832-19I113.14
kidney, neonate N25.CNhs11122.1353-25F313.66
kidney, neonate N30.CNhs11203.1385-42H19.62
liver, adult pregnant day01.CNhs10466.508-5B24.15
liver, embryo E12.CNhs10601.355-15F87.34
liver, embryo E13.CNhs10524.378-3H64.91
liver, embryo E14.CNhs10594.409-16E14.72
liver, embryo E15.CNhs10520.433-16D75.27
liver, embryo E16.CNhs10523.462-17F54.10
liver, embryo E17.CNhs10510.481-18A36.11
liver, embryo E18.CNhs10579.499-43G46.62
liver, neonate N00.CNhs11117.641-24F43.89
liver, neonate N03.CNhs11123.1345-25G23.84
liver, neonate N06.CNhs11101.684-20A818.69
liver, neonate N07.CNhs11103.716-20H26.33
liver, neonate N10.CNhs11115.751-24B99.36
liver, neonate N20.CNhs11220.823-25A35.05
liver, neonate N25.CNhs11198.1368-26H15.92
liver, neonate N30.CNhs11106.1382-42D16.75
lung, adult.CNhs10474.28-22B113.49
lung, embryo E12.CNhs10522.354-16G25.50
lung, embryo E14.CNhs10604.404-26F810.27
lung, embryo E15.CNhs11020.432-17C58.49
lung, embryo E16.CNhs10998.458-17B67.04
lung, embryo E17.CNhs10605.480-44A610.05
lung, embryo E18.CNhs10583.1287-20I610.95
lung, neonate N00.CNhs11224.640-42C612.10
lung, neonate N06.CNhs11212.683-20E510.25
lung, neonate N07.CNhs11111.715-19A37.09
lung, neonate N10.CNhs11219.750-23E611.16
lung, neonate N20.CNhs11109.822-18A411.96
lung, neonate N25.CNhs11119.1359-25C711.40
lung, neonate N30.CNhs11133.1394-42H212.30
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A113.57
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A110.33
mammary gland, adult lactating day02.CNhs10480.595-22B612.29
mammary gland, adult pregnant day19.CNhs10476.588-5H211.31
medulla oblongata, adult.CNhs10477.17-12C252.82
medulla oblongata, neonate N30.CNhs11200.1396-42A343.49
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C715.90
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.80
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.99
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.47
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E39.05
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D79.56
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D87.80
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D910.19
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.50
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D58.77
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.12
olfactory brain, adult.CNhs10489.18-22I969.41
ovary, adult.CNhs10507.91-2I715.90
ovary, embryo E18.CNhs11040.505-44H718.16
ovary, neonate N00.CNhs11217.1299-22I413.68
oviduct, adult pregnant day01.CNhs10500.988-6G617.32
pancreas, adult.CNhs10486.34-16E413.27
pancreas, embryo E14.CNhs11012.405-44F47.77
pancreas, embryo E15.CNhs11042.1556-45F29.67
pancreas, embryo E16.CNhs11003.460-26E510.94
pancreas, embryo E17.CNhs10599.1558-45G315.65
pancreas, embryo E18.CNhs10580.1535-43I711.68
pancreas, neonate N00.CNhs11105.645-26G912.15
pancreas, neonate N01.CNhs11138.1531-43D711.63
pancreas, neonate N02.CNhs11139.1539-43D811.41
pancreas, neonate N16.CNhs11136.787-43B67.58
pancreas, neonate N25.CNhs11094.1555-45E28.43
pancreas, neonate N30.CNhs11182.1548-44H515.47
pituitary gland, adult.CNhs10493.21-1G833.02
pituitary gland, embryo E12.CNhs11018.346-16E610.44
pituitary gland, embryo E13.CNhs11009.370-44C711.90
pituitary gland, embryo E14.CNhs11037.398-44A513.93
pituitary gland, embryo E15.CNhs10592.427-16B912.06
pituitary gland, embryo E16.CNhs11036.449-43F611.77
pituitary gland, embryo E17.CNhs11039.1265-44F516.29
pituitary gland, neonate N00.CNhs11190.1308-22E913.70
placenta, adult pregnant day10.CNhs10472.539-13I78.21
placenta, adult pregnant day17.CNhs10464.577-18G35.30
prostate, adult.CNhs10470.859-1F811.47
skin, adult.CNhs10492.30-1C313.36
skin, neonate N00.CNhs11124.650-25G48.07
skin, neonate N03.CNhs11215.662-22H310.37
skin, neonate N06.CNhs11097.693-20I514.21
skin, neonate N10.CNhs11108.762-6C413.62
small intestine, neonate N16.CNhs11114.790-21I19.04
spinal cord, adult.CNhs10505.24-13C946.73
spleen, adult.CNhs10465.25-2G25.64
spleen, embryo E16.CNhs11035.461-43C110.53
spleen, embryo E18.CNhs11011.1271-21F25.93
spleen, neonate N10.CNhs11116.752-24D13.77
spleen, neonate N20.CNhs11112.824-19H13.28
spleen, neonate N25.CNhs11099.1354-25G33.66
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.62
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D35.39
stomach, adult.CNhs10503.33-1H68.59
stomach, embryo E12.CNhs10588.356-43E312.18
stomach, embryo E15.CNhs10603.1252-16G810.57
stomach, embryo E16.CNhs11022.459-17D48.75
stomach, embryo E17.CNhs11006.1035-18D59.83
stomach, embryo E18.CNhs10999.1286-20C610.04
stomach, neonate N03.CNhs11193.1340-24B88.50
stomach, neonate N07.CNhs11210.718-18A910.50
stomach, neonate N25.CNhs11104.1355-25E414.92
stomach, neonate N30.CNhs11134.1386-42I113.48
submandibular gland, adult.CNhs10469.59-29C18.08
testis, adult.CNhs10504.57-7G523.11
testis, embryo E13.CNhs11031.389-23F512.71
testis, embryo E15.CNhs11034.443-27C513.07
testis, embryo E16.CNhs11033.470-26G520.61
testis, embryo E17.CNhs11029.486-18I518.34
testis, embryo E18.CNhs11027.503-18G516.73
testis, neonate N00.CNhs11189.1300-22B711.03
testis, neonate N07.CNhs11222.726-26I414.06
testis, neonate N10.CNhs11204.763-44D914.58
testis, neonate N20.CNhs11110.839-18H316.67
testis, neonate N30.CNhs11130.1391-42E217.28
thymus, adult.CNhs10471.38-12B55.06
thymus, embryo E14.CNhs11041.402-44I410.95
thymus, embryo E15.CNhs11005.430-45I29.45
thymus, embryo E16.CNhs11002.456-26C58.31
thymus, embryo E17.CNhs10581.478-18C17.16
thymus, embryo E18.CNhs10595.1273-19G47.75
thymus, neonate N02.CNhs11181.1541-43F86.13
thymus, neonate N03.CNhs11137.2104-43C77.09
thymus, neonate N06.CNhs11197.681-26C44.75
thymus, neonate N07.CNhs11211.713-19D35.03
thymus, neonate N10.CNhs11194.748-24E45.34
thymus, neonate N20.CNhs11186.820-7A24.09
thymus, neonate N25.CNhs11125.1362-25G75.77
thymus, neonate N30.CNhs11132.1393-42G23.04
tongue, adult.CNhs10499.32-1B412.92
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H36.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F76.37
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G59.23
urinary bladder, adult.CNhs10481.879-12E416.42
uterus, adult pregnant day19.CNhs10497.590-15F514.83
uterus, adult.CNhs10509.92-27E515.38
vagina, adult.CNhs10502.89-27D519.08
vesicular gland, adult.CNhs10491.51-27F89.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A170.03
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A267.21
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A372.18
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D757.91
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A448.64
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A556.65
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A670.88
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A768.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A843.05
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A963.68
whole body, embryo E11.CNhs11014.324-5I810.59
whole body, embryo E12.CNhs10587.857-27C99.58
whole body, embryo E13.CNhs10512.372-23H29.05
whole body, embryo E14.5.CNhs10578.420-27D28.02
whole body, embryo E14.CNhs10519.395-14B113.42
whole body, embryo E16.CNhs10514.453-14F215.44
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G58.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G59.31
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G510.36
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G512.17
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G510.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G510.21
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G512.04
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G511.89
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G511.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G510.31
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G511.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G510.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G59.27
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.23
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G512.78
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G510.97
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.70
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G510.07
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G510.98
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G511.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G510.05
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G512.22
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.96
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G511.87
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G511.93
whole body, embryo E17.5.CNhs10513.490-9F912.15
whole body, embryo E17.CNhs10517.475-3I518.49
whole body, embryo E18.CNhs10516.493-3B38.89
whole body, neonate N00.CNhs10525.657-19C29.45
whole body, neonate N01.CNhs10576.659-23C66.89
whole body, neonate N06.CNhs10515.692-21D110.15
whole body, neonate N10.CNhs10518.761-6B46.03





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.03e-1123
neuroblast (sensu Vertebrata)1.03e-1123
ectodermal cell3.81e-1044
neurectodermal cell3.81e-1044
neural cell6.59e-1043

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.14e-2554
nervous system1.06e-2475
central nervous system3.24e-2473
neural tube4.23e-2452
neural rod4.23e-2452
future spinal cord4.23e-2452
neural keel4.23e-2452
ectoderm-derived structure1.73e-2195
ectoderm1.73e-2195
presumptive ectoderm1.73e-2195
brain2.64e-2147
future brain2.64e-2147
regional part of brain1.32e-2046
gray matter1.74e-1834
anterior neural tube1.37e-1740
ecto-epithelium1.77e-1773
neurectoderm2.03e-1764
neural plate2.03e-1764
presumptive neural plate2.03e-1764
regional part of forebrain5.60e-1739
forebrain5.60e-1739
future forebrain5.60e-1739
brain grey matter9.11e-1629
regional part of telencephalon9.11e-1629
telencephalon9.11e-1629
pre-chordal neural plate1.80e-1349
cerebral cortex1.95e-1121
cerebral hemisphere1.95e-1121
pallium1.95e-1121
regional part of cerebral cortex4.19e-1017
structure with developmental contribution from neural crest1.14e-0992
occipital lobe2.05e-0710
visual cortex2.05e-0710
neocortex2.05e-0710
posterior neural tube3.94e-0712
chordal neural plate3.94e-0712
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