FFCP PHASE1:Mm9::chr1:75139292..75139316,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=227298 | |EntrezGene=227298 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q6NS82 | |UniProt=Q6NS82 | ||
|association_with_transcript=-43bp_to_ENSMUST00000060113,ENSMUST00000097694,NM_170755,uc007bnt.1,uc007bnu.1_5end | |association_with_transcript=-43bp_to_ENSMUST00000060113,ENSMUST00000097694,NM_170755,uc007bnt.1,uc007bnu.1_5end | ||
|cluster_id=chr1:75139292..75139316,+ | |||
|description=CAGE_peak_2_at_Fam134a_5end | |description=CAGE_peak_2_at_Fam134a_5end | ||
|id=chr1:75139292..75139316,+ | |id=chr1:75139292..75139316,+ | ||
|ontology_enrichment_celltype=CL:0000117!4.00e-07!23;CL:0000337!4.00e-07!23 | |ontology_enrichment_celltype=CL:0000117!4.00e-07!23;CL:0000337!4.00e-07!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.00e-07,23;CL:0000337,4.00e-07,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!6.95e-16!50;UBERON:0006238!6.95e-16!50;UBERON:0001049!2.23e-15!52;UBERON:0005068!2.23e-15!52;UBERON:0006241!2.23e-15!52;UBERON:0007135!2.23e-15!52;UBERON:0002616!2.96e-15!49;UBERON:0001017!1.82e-13!73;UBERON:0005743!1.82e-13!73;UBERON:0004121!4.77e-13!102;UBERON:0000924!4.77e-13!102;UBERON:0006601!4.77e-13!102;UBERON:0000073!7.54e-13!75;UBERON:0001016!7.54e-13!75;UBERON:0000033!7.72e-13!63;UBERON:0007023!7.94e-12!51;UBERON:0002020!9.74e-12!34;UBERON:0003080!3.07e-11!40;UBERON:0002780!8.93e-11!39;UBERON:0001890!8.93e-11!39;UBERON:0006240!8.93e-11!39;UBERON:0002346!1.01e-10!71;UBERON:0003075!1.01e-10!71;UBERON:0007284!1.01e-10!71;UBERON:0004111!1.13e-10!122;UBERON:0002791!1.46e-10!29;UBERON:0003528!1.46e-10!29;UBERON:0001893!1.46e-10!29;UBERON:0000025!7.26e-10!114;UBERON:0003056!5.22e-09!49;UBERON:0000956!1.07e-07!21;UBERON:0001869!1.07e-07!21;UBERON:0000203!1.07e-07!21;UBERON:0000480!1.07e-07!308;UBERON:0000467!1.07e-07!308;UBERON:0002619!1.67e-07!17 | |ontology_enrichment_uberon=UBERON:0000955!6.95e-16!50;UBERON:0006238!6.95e-16!50;UBERON:0001049!2.23e-15!52;UBERON:0005068!2.23e-15!52;UBERON:0006241!2.23e-15!52;UBERON:0007135!2.23e-15!52;UBERON:0002616!2.96e-15!49;UBERON:0001017!1.82e-13!73;UBERON:0005743!1.82e-13!73;UBERON:0004121!4.77e-13!102;UBERON:0000924!4.77e-13!102;UBERON:0006601!4.77e-13!102;UBERON:0000073!7.54e-13!75;UBERON:0001016!7.54e-13!75;UBERON:0000033!7.72e-13!63;UBERON:0007023!7.94e-12!51;UBERON:0002020!9.74e-12!34;UBERON:0003080!3.07e-11!40;UBERON:0002780!8.93e-11!39;UBERON:0001890!8.93e-11!39;UBERON:0006240!8.93e-11!39;UBERON:0002346!1.01e-10!71;UBERON:0003075!1.01e-10!71;UBERON:0007284!1.01e-10!71;UBERON:0004111!1.13e-10!122;UBERON:0002791!1.46e-10!29;UBERON:0003528!1.46e-10!29;UBERON:0001893!1.46e-10!29;UBERON:0000025!7.26e-10!114;UBERON:0003056!5.22e-09!49;UBERON:0000956!1.07e-07!21;UBERON:0001869!1.07e-07!21;UBERON:0000203!1.07e-07!21;UBERON:0000480!1.07e-07!308;UBERON:0000467!1.07e-07!308;UBERON:0002619!1.67e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.38e-16,54;UBERON:0001049,2.23e-15,52;UBERON:0005068,2.23e-15,52;UBERON:0006241,2.23e-15,52;UBERON:0007135,2.23e-15,52;UBERON:0000955,3.01e-14,47;UBERON:0006238,3.01e-14,47;UBERON:0002616,1.23e-13,46;UBERON:0001017,1.82e-13,73;UBERON:0004121,6.63e-13,95;UBERON:0000924,6.63e-13,95;UBERON:0006601,6.63e-13,95;UBERON:0001016,7.54e-13,75;UBERON:0007023,7.94e-12,51;UBERON:0002020,9.74e-12,34;UBERON:0003080,3.07e-11,40;UBERON:0002780,8.93e-11,39;UBERON:0001890,8.93e-11,39;UBERON:0006240,8.93e-11,39;UBERON:0002346,9.07e-11,64;UBERON:0003075,9.07e-11,64;UBERON:0007284,9.07e-11,64;UBERON:0010371,1.12e-10,73;UBERON:0004111,1.13e-10,122;UBERON:0003528,1.46e-10,29;UBERON:0002791,1.46e-10,29;UBERON:0001893,1.46e-10,29;UBERON:0000025,7.26e-10,114;UBERON:0003056,5.22e-09,49;UBERON:0011216,9.74e-08,194;UBERON:0000956,1.07e-07,21;UBERON:0001869,1.07e-07,21;UBERON:0000203,1.07e-07,21;UBERON:0002619,1.67e-07,17 | |||
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|phase1_expression=5.12476310735341,11.5161884520989,14.1049764210756,15.7281389879552,15.5277676283368,8.56184286750638,8.41005506143892,5.81054955487093,0.985521055061667,0.936258105287974,2.05461561870606,4.86610169871552,8.9024379564227,8.21751782738576,6.99530499812892,8.09901069559304,11.8925519281785,3.15462165358238,4.11343300817216,6.36584477697045,8.24919914465377,3.77305614563364,4.17919662622297,7.83962871687693,8.94696196161963,10.3361753540704,10.3382879078178,8.40337807474967,26.2232318849796,14.617747526076,13.5255611499736,7.62036808151557,11.6862309641068,0,8.95440021228951,10.140313366868,9.39179038806898,4.18531630736908,4.6880120671428,4.71171369576418,8.2352408324342,10.2456822743767,6.79714494243615,14.604030885167,12.3679856087808,6.9747765821439,14.0830441982647,13.7355848519681,11.8630538676615,13.2212331370513,9.79904951377538,18.6878333674463,2.34895648480831,1.45072428402269,3.6970317905671,7.20326420900652,9.74213695791773,14.4388185837684,12.7459370341547,19.0436752537932,20.2826049121977,8.80995783379743,9.78224275722253,27.4469413770827,40.543520865246,30.5506449426823,17.9760066311043,23.4373166246148,7.56934169851887,10.9354810048669,10.0955981448663,14.568200204594,17.4486147351775,11.5141351262057,10.4471563409878,11.9498442259303,38.540558349786,17.4931653176707,19.3544231902867,10.5509030184155,11.7104183811084,11.4600941522487,24.2889209131201,19.6966913511088,14.9742282821274,14.142172102736,10.2507610175354,10.9975673036927,6.36100023998746,6.2724394888632,10.4351215932604,18.0689014166091,10.879541339324,19.9690180905992,20.7928453583254,22.8493712419641,11.0951091904084,5.62420064507591,6.49465011507172,6.36011234118612,4.78867627240714,6.41632387071589,5.09610479413291,14.2213340630666,5.84525810730278,5.06719730950197,3.0331466700887,13.245330047411,3.6251303710604,15.7348667408714,5.03107447621794,10.3518262626128,6.91846491768175,8.44046787094686,8.11362079236363,11.6869929936598,21.5059621928905,14.4599356919912,8.84610551949874,5.82360659810673,6.8460870722722,7.27312879702833,9.31958806090611,18.4451902117275,20.1068838540917,13.0283098156382,2.99537811264801,3.59941638596045,1.65191295194984,18.7238299256028,28.8225379775735,17.7172636479139,19.2944995413427,22.7586757023994,20.778804455956,16.3863675698435,6.21220119486929,6.84238338355512,12.6361379216837,20.2024181651015,4.68433594665733,4.82794419310293,5.76198815377118,3.61691562805716,7.8241974024027,6.40568601424249,7.02762934197966,18.3679393224701,2.37124792226126,3.78212160335639,2.63926686245923,4.16471891612392,6.39508673218875,6.61679116392116,5.96768195583036,4.17971960318836,4.21327912387941,3.60287069960601,2.55747149456033,3.93538967817454,3.98694301967864,3.96136535214233,5.68187365404505,3.34499193970586,4.47374627373397,4.88321283975857,7.77992864058896,6.77238985729583,4.60767579757745,5.58169377868924,4.9451973822972,3.94739966048397,4.39100230582101,7.78397228810156,18.5055154736432,9.05560588937703,21.1468021109631,11.3713743665324,2.77274725695804,3.25131340604614,5.41243337552792,8.87407508342707,11.1189021922435,10.6526350623033,11.3886974770683,15.811099653505,15.0801125280162,15.7175612912509,15.5971269695296,8.98819408654222,9.72621224436124,15.3338780405863,6.2590407314517,2.97046132785295,4.50830942692322,7.127796474586,6.0125271021964,5.96154469067708,7.52514791778662,8.85660887877613,8.47793130343424,8.63780147452604,15.4155366085317,6.50695912292767,5.89676985339609,7.64531182108503,9.33156558387113,10.8529721888588,8.91190481234969,6.61701116136864,9.40384315295205,9.33508804839477,21.5652309791032,14.1413560114031,12.793544597697,11.36604950762,10.4050499842709,16.4030797263545,10.5309318394965,5.30575952957357,4.72598431681875,3.05541154395339,2.11221223459652,5.02518772325447,4.99891645860629,9.36641509717434,6.9359463406724,7.9727288273559,5.10255259703959,10.3233888270915,11.0518388394173,10.5593812764503,12.0633027151418,14.1415477792864,18.1952781017043,12.9690270763224,17.0183625387059,16.8784828692773,4.42624352517024,3.53459298086122,2.52406575533005,3.51394869866975,3.87762115919038,1.91175038362042,4.45597348164788,5.09537755419898,5.26253912177363,4.38383786866968,5.13874111330481,23.4564560987919,7.38088443082997,5.69809931735217,7.4928001302645,6.43383479592888,30.5313818181915,5.58395463156457,4.53485335447127,5.46954731292105,9.44966057218473,9.22305443831782,8.78656196771952,9.08834323693764,4.27796854061666,4.74055136903724,14.7586052004998,9.28219889233682,22.46901397975,5.40183282093931,7.37344497561701,5.5727629108214,7.98031051390231,10.7021290561242,8.55654907131029,19.4857567433344,8.21350978222986,21.3950391572458,13.0111754852428,15.9939665353236,10.8181165886257,7.17723806645055,9.90790455226033,6.07321329056727,11.3677526285642,17.2445530869774,5.63873906632914,5.15967169908056,5.92622487583077,8.66494902221579,6.28793447516716,8.46479240864134,3.56954702987096,4.89830083132803,2.9021994498929,14.3200592702267,2.84702394223022,5.08298667817122,4.10420295122845,5.43629569637619,6.33251434863915,4.31565908431426,5.70308844504818,4.97336289769656,11.276502676386,17.3975007664339,7.89170114157866,5.83114529571517,7.1147150896552,7.77804753376191,7.8787492321416,4.73077151374179,6.92407708009948,8.59348939970071,7.96931017635402,13.5287107662563,12.9613502816039,4.74016680942267,4.45995473638361,4.5192821152524,2.46849563657811,2.68540043501222,3.77494574084403,2.64429988943931,1.47689527174577,2.01932899896295,1.752756553065,2.52065462842101,2.92373642219257,2.79014340756955,2.57129184799452,12.0167103316062,4.43971906748129,1.88399098879899,4.36500002546604,7.92077335531981,11.2609485270709,4.02933573387983,11.3615240911905,23.0723167856267,13.5540442228096,19.7939851698086,21.7700295106971,17.5290245990561,23.2928056722018,18.8848474347425,29.0259675099676,28.8205570063501,19.4851235863208,20.7104124700728,1.03787347584177,3.19219898720825,4.60980735536162,7.77941494618541,3.77303692730368,4.96377472815038,8.66762238426299,8.03536723231687,8.02298023979538,6.31743029409494,6.84394109703647,7.9223063382152,6.367622507952,6.27446493567719,5.51380501973887,7.62069906052918,5.56244764535306,4.24400285020151,9.06588981767275,7.06554816645107,4.4573002810104,6.56660482789549,5.00715998889374,8.86613141457204,7.71696919405711,6.26148098398406,6.58540702341981,8.15516105457313,5.83957689537206,8.41713407486608,5.21994079746366,6.30428687203606,6.13846564754534,6.50734732981057,6.36591816237767,6.49507502638659,8.18760629558929,12.4625211348013,10.3295699317175,6.83833399270498,6.72416723299222 | ||
|short_description=p2@Fam134a | |short_description=p2@Fam134a | ||
}} | }} |
Latest revision as of 15:08, 1 October 2015
Short description: | p2@Fam134a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Fam134a_5end |
Coexpression cluster: | NA |
Association with transcript: | -43bp_to_ENSMUST00000060113, ENSMUST00000097694, NM_170755, uc007bnt.1, uc007bnu.1_5end |
EntrezGene: | Fam134a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.00e-07 | 23 |
neuroblast (sensu Vertebrata) | 4.00e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 1.38e-16 | 54 |
neural tube | 2.23e-15 | 52 |
neural rod | 2.23e-15 | 52 |
future spinal cord | 2.23e-15 | 52 |
neural keel | 2.23e-15 | 52 |
brain | 3.01e-14 | 47 |
future brain | 3.01e-14 | 47 |
regional part of brain | 1.23e-13 | 46 |
central nervous system | 1.82e-13 | 73 |
ectoderm-derived structure | 6.63e-13 | 95 |
ectoderm | 6.63e-13 | 95 |
presumptive ectoderm | 6.63e-13 | 95 |
nervous system | 7.54e-13 | 75 |
adult organism | 7.94e-12 | 51 |
gray matter | 9.74e-12 | 34 |
anterior neural tube | 3.07e-11 | 40 |
regional part of forebrain | 8.93e-11 | 39 |
forebrain | 8.93e-11 | 39 |
future forebrain | 8.93e-11 | 39 |
neurectoderm | 9.07e-11 | 64 |
neural plate | 9.07e-11 | 64 |
presumptive neural plate | 9.07e-11 | 64 |
ecto-epithelium | 1.12e-10 | 73 |
anatomical conduit | 1.13e-10 | 122 |
brain grey matter | 1.46e-10 | 29 |
regional part of telencephalon | 1.46e-10 | 29 |
telencephalon | 1.46e-10 | 29 |
tube | 7.26e-10 | 114 |
pre-chordal neural plate | 5.22e-09 | 49 |
organ system subdivision | 9.74e-08 | 194 |
cerebral cortex | 1.07e-07 | 21 |
cerebral hemisphere | 1.07e-07 | 21 |
pallium | 1.07e-07 | 21 |
regional part of cerebral cortex | 1.67e-07 | 17 |