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FFCP PHASE1:Mm9::chrX:139953119..139953142,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18481
|EntrezGene=18481
|HGNC=
|HGNC=
|MCL_coexpression_id=3743
|TSSclassifier=NA
|UniProt=Q61036,A3KGC0
|UniProt=Q61036,A3KGC0
|association_with_transcript=0bp_to_ENSMUST00000033640,ENSMUST00000070348,NM_001195048,uc009umg.2_5end
|association_with_transcript=0bp_to_ENSMUST00000033640,ENSMUST00000070348,NM_001195048,uc009umg.2_5end
|cluster_id=chrX:139953119..139953142,+
|description=CAGE_peak_4_at_Pak3_5end
|description=CAGE_peak_4_at_Pak3_5end
|id=chrX:139953119..139953142,+
|id=chrX:139953119..139953142,+
|ontology_enrichment_celltype=CL:0000393!7.41e-13!39;CL:0000211!7.41e-13!39;CL:0000117!2.56e-12!23;CL:0000337!2.56e-12!23;CL:0000540!1.30e-11!33;CL:0000047!1.30e-11!33;CL:0000031!1.30e-11!33;CL:0000404!1.30e-11!33;CL:0000055!1.23e-09!50;CL:0000221!3.32e-09!44;CL:0000133!3.32e-09!44;CL:0002319!6.51e-09!43
|ontology_enrichment_celltype=CL:0000393!7.41e-13!39;CL:0000211!7.41e-13!39;CL:0000117!2.56e-12!23;CL:0000337!2.56e-12!23;CL:0000540!1.30e-11!33;CL:0000047!1.30e-11!33;CL:0000031!1.30e-11!33;CL:0000404!1.30e-11!33;CL:0000055!1.23e-09!50;CL:0000221!3.32e-09!44;CL:0000133!3.32e-09!44;CL:0002319!6.51e-09!43
|ontology_enrichment_celltype_v019_2=CL:0000117,2.68e-15,23;CL:0000337,2.68e-15,23;CL:0000393,4.13e-12,39;CL:0000211,4.13e-12,39;CL:0000540,5.15e-11,33;CL:0000047,5.15e-11,33;CL:0000031,5.15e-11,33;CL:0000404,5.15e-11,33;CL:0000221,3.40e-07,44;CL:0000133,3.40e-07,44;CL:0002319,7.12e-07,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!3.36e-28!102;UBERON:0000924!3.36e-28!102;UBERON:0006601!3.36e-28!102;UBERON:0000033!5.18e-25!63;UBERON:0002346!1.89e-24!71;UBERON:0003075!1.89e-24!71;UBERON:0007284!1.89e-24!71;UBERON:0000073!1.19e-23!75;UBERON:0001016!1.19e-23!75;UBERON:0001017!1.52e-23!73;UBERON:0005743!1.52e-23!73;UBERON:0003056!1.38e-22!49;UBERON:0001049!1.41e-21!52;UBERON:0005068!1.41e-21!52;UBERON:0006241!1.41e-21!52;UBERON:0007135!1.41e-21!52;UBERON:0000955!6.10e-21!50;UBERON:0006238!6.10e-21!50;UBERON:0002616!3.52e-20!49;UBERON:0002020!8.76e-19!34;UBERON:0003080!1.19e-18!40;UBERON:0002780!5.52e-18!39;UBERON:0001890!5.52e-18!39;UBERON:0006240!5.52e-18!39;UBERON:0002791!2.91e-16!29;UBERON:0003528!2.91e-16!29;UBERON:0001893!2.91e-16!29;UBERON:0007811!6.72e-12!86;UBERON:0000956!7.96e-12!21;UBERON:0001869!7.96e-12!21;UBERON:0000203!7.96e-12!21;UBERON:0000153!1.09e-10!94;UBERON:0002619!5.19e-10!17;UBERON:0002021!6.74e-08!10;UBERON:0000411!6.74e-08!10;UBERON:0001950!6.74e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0010371,7.71e-29,73;UBERON:0004121,3.35e-27,95;UBERON:0000924,3.35e-27,95;UBERON:0006601,3.35e-27,95;UBERON:0002346,1.45e-26,64;UBERON:0003075,1.45e-26,64;UBERON:0007284,1.45e-26,64;UBERON:0003056,1.21e-25,49;UBERON:0000073,1.81e-24,54;UBERON:0002020,4.07e-23,34;UBERON:0001049,6.92e-23,52;UBERON:0005068,6.92e-23,52;UBERON:0006241,6.92e-23,52;UBERON:0007135,6.92e-23,52;UBERON:0001017,5.02e-22,73;UBERON:0001016,7.40e-21,75;UBERON:0003080,1.16e-20,40;UBERON:0003528,6.80e-20,29;UBERON:0002791,6.80e-20,29;UBERON:0001893,6.80e-20,29;UBERON:0000955,7.16e-20,47;UBERON:0006238,7.16e-20,47;UBERON:0002780,7.75e-20,39;UBERON:0001890,7.75e-20,39;UBERON:0006240,7.75e-20,39;UBERON:0002616,5.63e-19,46;UBERON:0010314,1.24e-16,92;UBERON:0000956,3.10e-14,21;UBERON:0001869,3.10e-14,21;UBERON:0000203,3.10e-14,21;UBERON:0002619,6.44e-12,17;UBERON:0002021,1.17e-09,10;UBERON:0000411,1.17e-09,10;UBERON:0001950,1.17e-09,10;UBERON:0002420,7.59e-07,8;UBERON:0007245,7.59e-07,8;UBERON:0010009,7.59e-07,8;UBERON:0010011,7.59e-07,8;UBERON:0000454,7.59e-07,8
|phase1_expression=2.40223270657191,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.40638862914521,2.83855407414641,2.9367480345869,0,0.436050312760893,0.219686182734472,1.1665793944457,0.419959264876088,0,0,0,0,1.02903774414379,1.14613375975503,0.515672092277442,4.45096213891115,4.7609188134483,3.1691570175309,0,0,0,0,0,0.299600110518405,0,5.49554945234932,2.56511282830212,2.10324961351382,1.99955689082663,2.65042249141936,6.73699395682247,3.83381884072945,3.67687514644008,6.60695285996332,4.72443150915195,5.52983519722476,4.48413378282659,3.7509933876988,8.85552729946492,2.23346399201105,5.6276261003168,5.34793867218835,6.18720029494702,9.5389026135399,5.21918448310842,0.908714319998209,0.831287161174641,1.73918693221007,0,0,0,0,0,0,1.53387290320252,0.779358013808606,0.70667914902068,2.25349471642689,0,0,0,0.865964164044856,0.506719730950197,0,0.5709193985953,0,1.63286352971307,0.346970653532272,0.608930956624282,0.461230994512117,0.150722640552623,1.05829836422134,0.251333182659351,0,0.578397427679647,0,1.13236794963186,0.220841518460394,0,0,0.878342391034642,0.41889341362691,0,0,0,0,7.04016005202667,10.0650132620098,6.78533501409468,9.21268897019065,7.41574826257959,6.44142938134636,8.76102820565891,0.611036183101898,0,0.505445516867349,1.05220927943237,1.56144531555244,2.06911893990126,2.88099407688559,3.16480117455002,6.73561341598146,8.96796041993949,7.21503279109912,4.9153640440413,0.646703978798527,0.378212160335639,0.527853372491847,0.219195732427575,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.467061369468678,0.16455984991348,0,0.0810688095458557,0,0,0.134206418760372,6.9395683026162,9.2614151141356,0,0,0,0,0.515469845288373,0.80673409849337,0.22237804384487,0,0,0.329397909448022,0.251335208800269,0.198956472041151,0,0,0,0.199141273254367,0,0.114248512609729,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0.482443521363367,0,0.568474235311454,0,0.509235257325564,0,0.335012514883631,0,0.975668239288994,0,0.44292937929755,0.159454768657487,0.163863314715738,0.172684981865896,0.433947175744535,0,0,0.491764273019036,0,8.50918126935297,6.56385444916338,3.11476396215683,0.252470927204373,0.315508219416257,0.780877488593277,1.07711698866399,0.716906393857656,1.11399337041197,0.566153061577665,0.809621403349789,0.292255857911312,1.58115111178609,9.96096080907602,2.6968616189571,0.35613120733451,0.488660878060728,2.47455184458803,0,0,0,0,0.590603785761546,0,0.775284879504663,0.363533729477506,0.356497378384721,0.316036757935816,0,0,3.06395645178409,1.98067203434441,0.388076051348264,1.92903331528433,1.24138163549592,0.891844088010353,0.822745103010605,1.522324745573,0,0,1.10264199027481,5.93590510589328,2.26050197374268,1.99032652262914,2.50681922406587,2.9545361954111,0,4.45020724825223,0,0,0,0.188368457004691,0.136694227721025,0,0,0,0,0,0.474503990371703,0.406638934253697,0,0.209088296014469,0.436725127492355,0,0.247960367176008,0.26175594198403,0,0,1.69107881605257,0.448549638131936,0.66183396182839,1.36115831840833,0.904118764344118,2.53434188236167,2.22978753426933,3.9061315453185,4.29923312145414,1.93267296660805,1.72818003754719,0.632022241256357,0.202725215290164,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0.116876902181569,1.58711268530648,0,0,0,0.386379188064381,0.750729901804728,1.09890974560359,1.50057865355346,1.50471631210609,12.4245405375755,8.28585425712918,8.59343270159095,9.10821866421544,4.7955776383945,9.06472676867641,8.77529250301348,5.40385443869065,11.7817026335893,5.69536342927002,2.07574695168353,3.99024873401031,3.41467211508268,2.67417388775123,3.14419743941973,1.83843508450014,2.22246727801615,1.85431551515005,3.85103051510178,2.52697211763797,2.28131369901216,2.26351609663291,2.34103768674706,1.6646539625266,2.06767688240208,1.90517476513229,1.85414921511769,1.15745532278223,1.64834360321323,1.32479028120958,3.42869252385415,1.95223386775271,2.62279808942053,1.74415699958794,1.12931256498397,2.5384382367503,1.28049581010941,0.526139422875686,2.17286582153379,3.36685362994643,1.77952527186261,1.87158516513571,1.22769312950907,2.01417893541756,1.73615949883027,2.49810577937946,1.40358965067245,1.93383948643468,1.72159498861959,0.661774257358546,1.15933917810211
|phase1_expression=2.40223270657191,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.40638862914521,2.83855407414641,2.9367480345869,0,0.436050312760893,0.219686182734472,1.1665793944457,0.419959264876088,0,0,0,0,1.02903774414379,1.14613375975503,0.515672092277442,4.45096213891115,4.7609188134483,3.1691570175309,0,0,0,0,0,0.299600110518405,0,5.49554945234932,2.56511282830212,2.10324961351382,1.99955689082663,2.65042249141936,6.73699395682247,3.83381884072945,3.67687514644008,6.60695285996332,4.72443150915195,5.52983519722476,4.48413378282659,3.7509933876988,8.85552729946492,2.23346399201105,5.6276261003168,5.34793867218835,6.18720029494702,9.5389026135399,5.21918448310842,0.908714319998209,0.831287161174641,1.73918693221007,0,0,0,0,0,0,1.53387290320252,0.779358013808606,0.70667914902068,2.25349471642689,0,0,0,0.865964164044856,0.506719730950197,0,0.5709193985953,0,1.63286352971307,0.346970653532272,0.608930956624282,0.461230994512117,0.150722640552623,1.05829836422134,0.251333182659351,0,0.578397427679647,0,1.13236794963186,0.220841518460394,0,0,0.878342391034642,0.41889341362691,0,0,0,0,7.04016005202667,10.0650132620098,6.78533501409468,9.21268897019065,7.41574826257959,6.44142938134636,8.76102820565891,0.611036183101898,0,0.505445516867349,1.05220927943237,1.56144531555244,2.06911893990126,2.88099407688559,3.16480117455002,6.73561341598146,8.96796041993949,7.21503279109912,4.9153640440413,0.646703978798527,0.378212160335639,0.527853372491847,0.219195732427575,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.467061369468678,0.16455984991348,0,0.0810688095458557,0,0,0.134206418760372,6.9395683026162,9.2614151141356,0,0,0,0,0.515469845288373,0.80673409849337,0.22237804384487,0,0,0.329397909448022,0.251335208800269,0.198956472041151,0,0,0,0.199141273254367,0,0.114248512609729,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0.482443521363367,0,0.568474235311454,0,0.509235257325564,0,0.335012514883631,0,0.975668239288994,0,0.44292937929755,0.159454768657487,0.163863314715738,0.172684981865896,0.433947175744535,0,0,0.491764273019036,0,8.50918126935297,6.56385444916338,3.11476396215683,0.252470927204373,0.315508219416257,0.780877488593277,1.07711698866399,0.716906393857656,1.11399337041197,0.566153061577665,0.809621403349789,0.292255857911312,1.58115111178609,9.96096080907602,2.6968616189571,0.35613120733451,0.488660878060728,2.47455184458803,0,0,0,0,0.590603785761546,0,0.775284879504663,0.363533729477506,0.356497378384721,0.316036757935816,0,0,3.06395645178409,1.98067203434441,0.388076051348264,1.92903331528433,1.24138163549592,0.891844088010353,0.822745103010605,1.522324745573,0,0,1.10264199027481,5.93590510589328,2.26050197374268,1.99032652262914,2.50681922406587,2.9545361954111,0,4.45020724825223,0,0,0,0.188368457004691,0.136694227721025,0,0,0,0,0,0.474503990371703,0.406638934253697,0,0.209088296014469,0.436725127492355,0,0.247960367176008,0.26175594198403,0,0,1.69107881605257,0.448549638131936,0.66183396182839,1.36115831840833,0.904118764344118,2.53434188236167,2.22978753426933,3.9061315453185,4.29923312145414,1.93267296660805,1.72818003754719,0.632022241256357,0.202725215290164,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0.116876902181569,1.58711268530648,0,0,0,0.386379188064381,0.750729901804728,1.09890974560359,1.50057865355346,1.50471631210609,12.4245405375755,8.28585425712918,8.59343270159095,9.10821866421544,4.7955776383945,9.06472676867641,8.77529250301348,5.40385443869065,11.7817026335893,5.69536342927002,2.07574695168353,3.99024873401031,3.41467211508268,2.67417388775123,3.14419743941973,1.83843508450014,2.22246727801615,1.85431551515005,3.85103051510178,2.52697211763797,2.28131369901216,2.26351609663291,2.34103768674706,1.6646539625266,2.06767688240208,1.90517476513229,1.85414921511769,1.15745532278223,1.64834360321323,1.32479028120958,3.42869252385415,1.95223386775271,2.62279808942053,1.74415699958794,1.12931256498397,2.5384382367503,1.28049581010941,0.526139422875686,2.17286582153379,3.36685362994643,1.77952527186261,1.87158516513571,1.22769312950907,2.01417893541756,1.73615949883027,2.49810577937946,1.40358965067245,1.93383948643468,1.72159498861959,0.661774257358546,1.15933917810211
|short_description=p4@Pak3
|short_description=p4@Pak3
}}
}}

Latest revision as of 16:03, 1 October 2015

Short description:p4@Pak3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Pak3_5end
Coexpression cluster:MCL_coexpression_mm9:3743
Association with transcript: 0bp_to_ENSMUST00000033640, ENSMUST00000070348, NM_001195048, uc009umg.2_5end
EntrezGene:Pak3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Pak3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.53
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.41
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.84
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.94
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C34.45
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.50
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.57
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.74
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.83
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.72
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.48
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.75
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.86
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.35
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.19
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F69.54
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.22
Mouse Schwann, donor1.CNhs12507.11728-123D90.91
Mouse Schwann, donor2.CNhs12573.11746-123F90.83
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.25
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.63
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C11.06
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A47.04
corpus striatum, adult.CNhs10487.19-21D810.07
corpus striatum, neonate N00.CNhs11226.630-43F16.79
cortex, adult.CNhs10473.12-14D59.21
cortex, neonate N30.CNhs11107.1392-42F27.42
diencephalon, adult.CNhs10482.20-12F26.44
diencephalon, neonate N30.CNhs11201.1388-42B28.76
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C61.56
eyeball, embryo E14.CNhs10521.399-16E22.07
eyeball, embryo E15.CNhs10593.426-16C92.88
eyeball, embryo E17.CNhs11023.1261-18D43.16
eyeball, neonate N00.CNhs11207.633-15C66.74
eyeball, neonate N01.CNhs11140.1532-43E78.97
eyeball, neonate N02.CNhs11205.1551-44G87.22
eyeball, neonate N16.CNhs11188.777-19A24.92
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E86.94
hippocampus, neonate N00.CNhs11228.627-43G19.26
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C28.51
medulla oblongata, neonate N30.CNhs11200.1396-42A36.56
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.11
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I99.96
ovary, adult.CNhs10507.91-2I72.70
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G62.47
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.06
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C35.94
skin, neonate N00.CNhs11124.650-25G42.26
skin, neonate N03.CNhs11215.662-22H31.99
skin, neonate N06.CNhs11097.693-20I52.51
skin, neonate N10.CNhs11108.762-6C42.95
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C94.45
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G51.36
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G52.53
testis, neonate N00.CNhs11189.1300-22B72.23
testis, neonate N07.CNhs11222.726-26I43.91
testis, neonate N10.CNhs11204.763-44D94.30
testis, neonate N20.CNhs11110.839-18H31.93
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A112.42
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.29
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.59
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.11
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.78
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A811.78
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.70
whole body, embryo E11.CNhs11014.324-5I82.08
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H23.41
whole body, embryo E14.5.CNhs10578.420-27D22.67
whole body, embryo E14.CNhs10519.395-14B13.14
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.85
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.54
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.01
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.68e-1523
neuroblast (sensu Vertebrata)2.68e-1523
electrically responsive cell4.13e-1239
electrically active cell4.13e-1239
neuron5.15e-1133
neuronal stem cell5.15e-1133
neuroblast5.15e-1133
electrically signaling cell5.15e-1133
ectodermal cell3.40e-0744
neurectodermal cell3.40e-0744
neural cell7.12e-0743

Uber anatomy
Ontology termp-valuen
ecto-epithelium7.71e-2973
ectoderm-derived structure3.35e-2795
ectoderm3.35e-2795
presumptive ectoderm3.35e-2795
neurectoderm1.45e-2664
neural plate1.45e-2664
presumptive neural plate1.45e-2664
pre-chordal neural plate1.21e-2549
regional part of nervous system1.81e-2454
gray matter4.07e-2334
neural tube6.92e-2352
neural rod6.92e-2352
future spinal cord6.92e-2352
neural keel6.92e-2352
central nervous system5.02e-2273
nervous system7.40e-2175
anterior neural tube1.16e-2040
brain grey matter6.80e-2029
regional part of telencephalon6.80e-2029
telencephalon6.80e-2029
brain7.16e-2047
future brain7.16e-2047
regional part of forebrain7.75e-2039
forebrain7.75e-2039
future forebrain7.75e-2039
regional part of brain5.63e-1946
structure with developmental contribution from neural crest1.24e-1692
cerebral cortex3.10e-1421
cerebral hemisphere3.10e-1421
pallium3.10e-1421
regional part of cerebral cortex6.44e-1217
occipital lobe1.17e-0910
visual cortex1.17e-0910
neocortex1.17e-0910
basal ganglion7.59e-078
nuclear complex of neuraxis7.59e-078
aggregate regional part of brain7.59e-078
collection of basal ganglia7.59e-078
cerebral subcortex7.59e-078
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