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FFCP PHASE1:Mm9::chr13:48356475..48356492,+: Difference between revisions

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(Created page with "{{FFCP |id=chr13:48356475..48356492,+ |short_description=p1@Id4 |description=CAGE_peak_1_at_Id4_5end |association_with_transcript=-303bp_to_ENSMUST00000021810,NM_031166,uc...")
 
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{{FFCP
{{FFCP
|id=chr13:48356475..48356492,+
|DHSsupport=NA
|short_description=p1@Id4
|DPIdataset=NA
|description=CAGE_peak_1_at_Id4_5end
|association_with_transcript=-303bp_to_ENSMUST00000021810,NM_031166,uc007qid.1_5end
|EntrezGene=15904
|EntrezGene=15904
|HGNC=
|HGNC=
|MCL_coexpression_id=2852
|TSSclassifier=NA
|UniProt=P41139,Q544D2
|UniProt=P41139,Q544D2
|association_with_transcript=-303bp_to_ENSMUST00000021810,NM_031166,uc007qid.1_5end
|cluster_id=chr13:48356475..48356492,+
|description=CAGE_peak_1_at_Id4_5end
|id=chr13:48356475..48356492,+
|ontology_enrichment_celltype=CL:0000221!4.88e-17!44;CL:0000133!4.88e-17!44;CL:0002319!1.89e-16!43;CL:0000117!1.41e-14!23;CL:0000337!1.41e-14!23;CL:0000055!8.19e-14!50;CL:0000540!3.26e-12!33;CL:0000047!3.26e-12!33;CL:0000031!3.26e-12!33;CL:0000404!3.26e-12!33;CL:0000393!3.25e-10!39;CL:0000211!3.25e-10!39;CL:0002321!4.06e-07!70;CL:0000220!4.06e-07!70
|ontology_enrichment_celltype_v019_2=CL:0000221,4.54e-17,44;CL:0000133,4.54e-17,44;CL:0002319,1.76e-16,43;CL:0000117,1.32e-14,23;CL:0000337,1.32e-14,23;CL:0000540,3.10e-12,33;CL:0000047,3.10e-12,33;CL:0000031,3.10e-12,33;CL:0000404,3.10e-12,33;CL:0000393,3.12e-10,39;CL:0000211,3.12e-10,39;CL:0002321,6.75e-07,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.54e-31,95;UBERON:0000924,1.54e-31,95;UBERON:0006601,1.54e-31,95;UBERON:0001016,1.31e-29,75;UBERON:0001017,2.36e-29,73;UBERON:0010371,1.61e-26,73;UBERON:0000073,6.71e-25,54;UBERON:0002346,5.84e-24,64;UBERON:0003075,5.84e-24,64;UBERON:0007284,5.84e-24,64;UBERON:0001049,6.59e-24,52;UBERON:0005068,6.59e-24,52;UBERON:0006241,6.59e-24,52;UBERON:0007135,6.59e-24,52;UBERON:0000955,2.41e-20,47;UBERON:0006238,2.41e-20,47;UBERON:0002616,5.93e-20,46;UBERON:0003080,1.38e-17,40;UBERON:0003056,1.69e-17,49;UBERON:0002780,4.55e-17,39;UBERON:0001890,4.55e-17,39;UBERON:0006240,4.55e-17,39;UBERON:0002020,1.87e-16,34;UBERON:0003528,2.82e-13,29;UBERON:0002791,2.82e-13,29;UBERON:0001893,2.82e-13,29;UBERON:0010314,1.55e-12,92;UBERON:0000956,7.42e-09,21;UBERON:0001869,7.42e-09,21;UBERON:0000203,7.42e-09,21;UBERON:0000922,9.97e-09,320;UBERON:0003076,6.07e-07,12;UBERON:0003057,6.07e-07,12;UBERON:0000489,7.24e-07,21;UBERON:0002619,8.54e-07,17
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2126189885925,2.66723823292499,1.41156659191577,1.75424185331554,3.07877893249054,3.15567635890236,19.9522737581386,0.665957860122194,0.717710852875806,2.18250001273302,234.145787967015,38.6625899429435,32.0515342467714,18.0069438426415,35.6116193865108,38.4031252979605,30.8417908459809,40.1026859407578,31.9646919159259,36.309373547844,34.7481192799262,51.3017100176172,40.5289082901798,49.8456649882625,54.3648327339411,70.7829710524085,49.8781091751289,66.4153726383582,33.3056202383563,47.79180107918,41.1809458928032,22.6691662357648,25.7543821548618,19.8969909946925,24.2589323293246,25.0944506891337,28.2939512079114,34.4600747489167,31.7564755928152,34.3464104354567,31.9116773159659,31.6364209829455,35.8811150062491,39.5602464771174,27.9677948255355,32.5725789766145,31.4132176902027,31.4735770730464,30.086708242892,29.3621266895831,33.9304577645623,31.4636113341169,32.3575745068547,32.8645955506986,26.9348290395714,28.2351343135534,34.2795598666961,38.4677180579508,34.7058524256564,31.6366842009072,59.4549175492311,29.0075194472306,36.5280791882107,28.8845381423953,26.0297874561028,12.9845987947436
|phase1_expression=68.5437065608518,0.697950815278722,0,0.90739263392049,0.500895729946347,5.20425742926858,5.60670337429262,0.129123323441576,0,0,0,0,0,0,0.333109761815663,0.404950534779652,0,0,0,0,36.2284416043557,0,0.261199789138935,2.07990149631429,2.98232065387321,0.57423196411502,2.58457197695445,1.72376986148711,8.7410772949932,5.79669298447841,7.53883736228036,0,0,0,1.1554064790051,0.997407872150954,1.02084678131185,0,0,0,0,0,0,27.0678158647491,21.4919094185371,6.42413632565885,23.4717403304412,195.1325149605,188.710430968911,219.70578595394,106.529666856901,119.314628422926,0,0,0,5.40244815675489,17.1920063963254,18.5641953219879,299.630678533064,315.807614625404,309.943556314522,46.7605454255402,40.0182658250013,16.6481447697059,10.8775299882367,18.4724829885986,203.728075152515,633.575985475243,180.212546192134,123.260421696834,161.529570317861,176.246657377147,171.1731192375,145.764051065795,199.646116130986,159.024850083534,74.8787990795843,70.1003486087681,75.5744143620718,396.318294629233,482.871782933518,336.510037379667,65.6080047653245,73.7219019141501,68.7592114995645,194.454866412621,207.435538924293,212.681767686668,29.5332153999418,39.9773552964895,70.7269352432094,7.74381489283248,1.3599426674155,1.07940638327563,0.649776417447669,0,16.993774835942,9.37366774179318,7.53379413348319,6.71345191569646,145.913782888641,30.7983545794363,25.4805239706646,42.6640021891999,22.2985772241551,16.2150313904063,15.1657333504435,16.4424786795446,0.517875767294343,2.22663208597237,9.54169297213747,5.48037860961854,4.61230994512117,6.0289056221049,6.11461277105665,2.89033160058254,5.93267922562497,17.930320258069,5.30766331169925,11.6472131962135,10.3795513676385,12.1218813283806,18.6391761218122,101.594936563007,101.581652804526,11.240110429178,0,0,0,79.8384108027705,156.007705561152,162.722385986159,70.2250253576797,78.7603608577418,88.9332830714917,104.645614678704,28.8205399696395,19.0342665033442,7.58168275301024,30.3036272476523,10.6698763229417,26.8985462187163,32.0510591053522,31.7987165633359,33.0657385875453,38.6903435260246,48.724896771059,30.0095910057258,6.25147179505242,14.9393803332577,21.2900860238378,27.1802708210193,32.531528159395,37.9594861509162,40.5390808723649,13.9323986772945,0,0,0,7.66365358381357,7.27030785941398,7.92273070428465,7.33908680314152,4.9191057936851,7.86762275725629,4.88321283975857,5.90201483079162,5.7215017759913,5.59503489705834,5.25335885053105,3.97237166774693,5.26319954731196,3.51280184465681,3.35516046900929,81.3822100943172,73.6797024635677,0.660837565967596,9.78467096655114,16.8497717922835,19.7401171081373,27.577636722928,21.781820659321,25.5734750421601,20.1639163679313,15.6594590309689,21.7402620235694,32.1709067264345,38.5975555759833,34.8985715943225,17.9763881730844,18.1555961894743,18.1218558661474,38.1232480915694,40.2154764386245,41.7018621990398,43.1740815032066,51.5913615865884,47.4819500657457,44.0758663756073,44.8734849857991,48.0416107194607,35.5383832094786,2.66807364378434,1.50160595144485,2.35870794135844,0.449724224769707,0.608580364165509,0.241177159752417,0.50925170356284,1.15078454980324,1.62135226775035,1.92192989231657,2.87536413054709,8.18710084870708,5.61667811606209,5.55673531483646,2.87035861635059,6.75420929908714,10.9004382198297,13.0749074121634,15.6446377384345,16.4652733201932,10.5610611729826,8.04030035720716,9.28370199455454,16.9766273636285,20.4925687338048,21.4820748959312,23.7587605299656,14.4199716949849,16.0597033135283,15.0435020924772,0,0,8.35999264132362,21.7990029580739,58.7615159355319,61.1845004011301,47.8690040499892,6.81671503451807,29.3422644057119,24.5976408906882,42.869256148827,20.3123478259669,19.6062833192507,12.4553673547086,9.31064613852257,27.179794785752,16.602086673754,54.3033024752854,27.8202567008207,46.4751225571536,40.2330789603333,63.3485272214536,3.98235415019888,8.74010290157933,11.1859716076958,9.8074641473067,8.26845300066164,10.4527950300935,10.5955600198971,5.45300594216258,5.34746067577082,7.26884543252377,4.21674434299995,1.03135543248187,34.3844001811326,93.45170780225,97.4070888884141,76.73265854131,44.6897388778529,38.3492957844452,60.5540395815805,42.6250928760439,2.3467170806371,2.96564899209348,26.9044645627054,64.6354111530602,31.3240987790057,69.5408024421637,79.621353450092,87.4870995641177,24.1929094402776,84.9247883208134,5.63873906632914,60.4713523132242,24.0752885580625,8.85331747922048,5.05768642567793,5.94823250336959,0.339956859987711,0.419854356970974,0.552799895217695,26.7307773044232,31.475431361323,30.904559003281,30.6735167933916,34.0813922503584,35.3747353268808,45.1795560389149,53.9727065886444,38.4781234716524,25.4045347651914,24.853572523477,55.2419079910507,14.204071874178,14.3948886697675,8.94475466382619,5.29555276258697,5.23763989021412,5.63314745499619,15.624526181274,4.61381115473128,53.3900907025473,40.9002608886169,2.8441000856536,17.0289180843738,10.0656738021531,4.67714962720062,4.47566739168704,3.77494574084403,2.76449533895928,2.51072196196781,2.22126189885925,2.66723823292499,1.41156659191577,1.75424185331554,3.07877893249054,3.15567635890236,19.9522737581386,0.665957860122194,0.717710852875806,2.18250001273302,234.145787967015,38.6625899429435,32.0515342467714,18.0069438426415,35.6116193865108,38.4031252979605,30.8417908459809,40.1026859407578,31.9646919159259,36.309373547844,34.7481192799262,51.3017100176172,40.5289082901798,49.8456649882625,54.3648327339411,70.7829710524085,49.8781091751289,66.4153726383582,33.3056202383563,47.79180107918,41.1809458928032,22.6691662357648,25.7543821548618,19.8969909946925,24.2589323293246,25.0944506891337,28.2939512079114,34.4600747489167,31.7564755928152,34.3464104354567,31.9116773159659,31.6364209829455,35.8811150062491,39.5602464771174,27.9677948255355,32.5725789766145,31.4132176902027,31.4735770730464,30.086708242892,29.3621266895831,33.9304577645623,31.4636113341169,32.3575745068547,32.8645955506986,26.9348290395714,28.2351343135534,34.2795598666961,38.4677180579508,34.7058524256564,31.6366842009072,59.4549175492311,29.0075194472306,36.5280791882107,28.8845381423953,26.0297874561028,12.9845987947436
|short_description=p1@Id4
}}
}}

Latest revision as of 16:27, 1 October 2015

Short description:p1@Id4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Id4_5end
Coexpression cluster:MCL_coexpression_mm9:2852
Association with transcript: -303bp_to_ENSMUST00000021810, NM_031166, uc007qid.1_5end
EntrezGene:Id4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Id4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G768.54
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.20
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.61
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A336.23
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.08
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.98
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I12.58
GP2+ M cell, pool3.CNhs13240.11847-124I21.72
Ileum epithelium, pool1.CNhs13199.10252-104B98.74
Ileum epithelium, pool2.CNhs13232.10253-104C15.80
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C87.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D827.07
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D921.49
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B36.42
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B723.47
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2195.13
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8188.71
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3219.71
Mouse Astrocytes, donor2.CNhs12078.11552-120C4106.53
Mouse Astrocytes, donor3.CNhs12107.11633-122C4119.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C15.40
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E117.19
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C518.56
Mouse Granule cells, donor1.CNhs12131.11713-123C3299.63
Mouse Granule cells, donor2.CNhs12357.11731-123E3315.81
Mouse Granule cells, donor3.CNhs12108.11636-122C7309.94
Mouse Meningeal cells, donor1.CNhs12132.11716-123C646.76
Mouse Meningeal cells, donor3.CNhs12109.11639-122D140.02
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C716.65
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E710.88
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D218.47
Mouse Microglia, donor1.CNhs12629.11718-123C8203.73
Mouse Microglia, donor2.CNhs12634.11736-123E8633.58
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5180.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5123.26
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9161.53
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1176.25
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5171.17
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2145.76
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2199.65
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6159.02
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D374.88
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F370.10
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D775.57
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4396.32
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4482.87
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8336.51
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E465.61
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E573.72
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I668.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6194.45
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6207.44
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1212.68
Mouse Schwann, donor1.CNhs12507.11728-123D929.53
Mouse Schwann, donor2.CNhs12573.11746-123F939.98
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G370.73
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F77.74
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A716.99
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I79.37
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E37.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I86.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6145.91
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H130.80
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I825.48
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B642.66
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G122.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G216.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G315.17
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B616.44
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D72.23
adrenal gland, embryo E14.CNhs11038.406-44C59.54
adrenal gland, embryo E16.CNhs11004.1254-43D65.48
adrenal gland, embryo E17.CNhs11043.1263-45I14.61
adrenal gland, embryo E18.CNhs11026.1262-18F56.03
adrenal gland, neonate N00.CNhs11191.1311-23C16.11
adrenal gland, neonate N25.CNhs11223.1377-27I32.89
amnion, adult pregnant day17.5.CNhs10488.583-22A85.93
aorta, adult.CNhs10498.46-23H117.93
bone (os femoris), adult.CNhs10483.56-12G25.31
bone (os femoris), neonate N02.CNhs11227.1985-43F511.65
bone (os femoris), neonate N16.CNhs11225.1525-43A610.38
bone (os femoris), neonate N20.CNhs11195.1350-25C312.12
cecum, adult.CNhs10467.37-13H418.64
cerebellum, adult.CNhs10494.15-8B2101.59
cerebellum, neonate N30.CNhs11135.1395-42I2101.58
colon, adult.CNhs10468.36-18H711.24
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A479.84
corpus striatum, adult.CNhs10487.19-21D8156.01
corpus striatum, neonate N00.CNhs11226.630-43F1162.72
cortex, adult.CNhs10473.12-14D570.23
cortex, neonate N30.CNhs11107.1392-42F278.76
diencephalon, adult.CNhs10482.20-12F288.93
diencephalon, neonate N30.CNhs11201.1388-42B2104.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B128.82
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A219.03
epididymis, adult.CNhs10490.58-23B27.58
eyeball, adult.CNhs10484.31-12G430.30
eyeball, embryo E12.CNhs11016.345-16C610.67
eyeball, embryo E14.CNhs10521.399-16E226.90
eyeball, embryo E15.CNhs10593.426-16C932.05
eyeball, embryo E17.CNhs11023.1261-18D431.80
eyeball, neonate N00.CNhs11207.633-15C633.07
eyeball, neonate N01.CNhs11140.1532-43E738.69
eyeball, neonate N02.CNhs11205.1551-44G848.72
eyeball, neonate N16.CNhs11188.777-19A230.01
forelimb, embryo E11.CNhs10596.335-25E26.25
forelimb, embryo E12.CNhs10600.359-14H214.94
forelimb, embryo E13.CNhs10589.384-1E221.29
forelimb, embryo E14.CNhs10577.413-26A827.18
forelimb, embryo E15.CNhs11007.437-20E732.53
forelimb, embryo E17.CNhs10598.1517-43C437.96
forelimb, embryo E18.CNhs11008.1520-43B540.54
gonad, embryo E13.CNhs11044.1564-45I613.93
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E97.66
heart, embryo E12.CNhs11015.353-12F57.27
heart, embryo E13.CNhs11013.376-3I97.92
heart, embryo E14.CNhs10597.403-26D47.34
heart, embryo E15.CNhs11017.431-16C84.92
heart, embryo E16.CNhs11021.457-17C67.87
heart, embryo E17.CNhs11025.479-18E54.88
heart, embryo E18.CNhs11030.1283-20G35.90
heart, neonate N00.CNhs11213.639-21E35.72
heart, neonate N03.CNhs11221.1349-25I25.60
heart, neonate N10.CNhs11118.749-24G15.25
heart, neonate N16.CNhs11209.782-15G13.97
heart, neonate N20.CNhs11127.821-26I65.26
heart, neonate N25.CNhs11196.1351-25D33.51
heart, neonate N30.CNhs11202.1390-42D23.36
hippocampus, adult.CNhs10478.13-16E881.38
hippocampus, neonate N00.CNhs11228.627-43G173.68
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A39.78
intestine, embryo E12.CNhs11019.1251-16I516.85
intestine, embryo E13.CNhs11010.381-16D519.74
intestine, embryo E15.CNhs10602.976-16D827.58
intestine, embryo E16.CNhs10585.463-22H421.78
intestine, embryo E17.CNhs10582.482-18D325.57
intestine, embryo E18.CNhs10526.1289-20F720.16
intestine, neonate N00.CNhs11126.644-26D115.66
intestine, neonate N01.CNhs11192.1322-23E921.74
intestine, neonate N06.CNhs11102.688-20B832.17
intestine, neonate N07.CNhs11095.720-20F238.60
intestine, neonate N10.CNhs11098.755-23A534.90
intestine, neonate N20.CNhs11187.827-18D117.98
intestine, neonate N25.CNhs11121.1352-25E318.16
intestine, neonate N30.CNhs11131.1384-42G118.12
kidney, embryo E14.CNhs10606.411-4I938.12
kidney, embryo E15.CNhs10997.434-16F840.22
kidney, embryo E16.CNhs10584.464-22A541.70
kidney, embryo E17.CNhs11028.483-18I243.17
kidney, embryo E18.CNhs11001.1288-20C751.59
kidney, neonate N00.CNhs11214.646-21G747.48
kidney, neonate N10.CNhs11206.758-6D544.08
kidney, neonate N20.CNhs11113.832-19I144.87
kidney, neonate N25.CNhs11122.1353-25F348.04
kidney, neonate N30.CNhs11203.1385-42H135.54
liver, adult pregnant day01.CNhs10466.508-5B22.67
liver, embryo E12.CNhs10601.355-15F81.50
liver, embryo E13.CNhs10524.378-3H62.36
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F41.62
liver, neonate N03.CNhs11123.1345-25G21.92
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H28.19
liver, neonate N10.CNhs11115.751-24B95.62
liver, neonate N20.CNhs11220.823-25A35.56
liver, neonate N25.CNhs11198.1368-26H12.87
liver, neonate N30.CNhs11106.1382-42D16.75
lung, adult.CNhs10474.28-22B110.90
lung, embryo E12.CNhs10522.354-16G213.07
lung, embryo E14.CNhs10604.404-26F815.64
lung, embryo E15.CNhs11020.432-17C516.47
lung, embryo E16.CNhs10998.458-17B610.56
lung, embryo E17.CNhs10605.480-44A68.04
lung, embryo E18.CNhs10583.1287-20I69.28
lung, neonate N00.CNhs11224.640-42C616.98
lung, neonate N06.CNhs11212.683-20E520.49
lung, neonate N07.CNhs11111.715-19A321.48
lung, neonate N10.CNhs11219.750-23E623.76
lung, neonate N20.CNhs11109.822-18A414.42
lung, neonate N25.CNhs11119.1359-25C716.06
lung, neonate N30.CNhs11133.1394-42H215.04
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B68.36
mammary gland, adult pregnant day19.CNhs10476.588-5H221.80
medulla oblongata, adult.CNhs10477.17-12C258.76
medulla oblongata, neonate N30.CNhs11200.1396-42A361.18
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C747.87
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.82
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E129.34
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E224.60
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E342.87
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D720.31
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D819.61
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D912.46
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D49.31
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D527.18
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D616.60
olfactory brain, adult.CNhs10489.18-22I954.30
ovary, adult.CNhs10507.91-2I727.82
ovary, embryo E18.CNhs11040.505-44H746.48
ovary, neonate N00.CNhs11217.1299-22I440.23
oviduct, adult pregnant day01.CNhs10500.988-6G663.35
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F48.74
pancreas, embryo E15.CNhs11042.1556-45F211.19
pancreas, embryo E16.CNhs11003.460-26E59.81
pancreas, embryo E17.CNhs10599.1558-45G38.27
pancreas, embryo E18.CNhs10580.1535-43I710.45
pancreas, neonate N00.CNhs11105.645-26G910.60
pancreas, neonate N01.CNhs11138.1531-43D75.45
pancreas, neonate N02.CNhs11139.1539-43D85.35
pancreas, neonate N16.CNhs11136.787-43B67.27
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G834.38
pituitary gland, embryo E12.CNhs11018.346-16E693.45
pituitary gland, embryo E13.CNhs11009.370-44C797.41
pituitary gland, embryo E14.CNhs11037.398-44A576.73
pituitary gland, embryo E15.CNhs10592.427-16B944.69
pituitary gland, embryo E16.CNhs11036.449-43F638.35
pituitary gland, embryo E17.CNhs11039.1265-44F560.55
pituitary gland, neonate N00.CNhs11190.1308-22E942.63
placenta, adult pregnant day10.CNhs10472.539-13I72.35
placenta, adult pregnant day17.CNhs10464.577-18G32.97
prostate, adult.CNhs10470.859-1F826.90
skin, adult.CNhs10492.30-1C364.64
skin, neonate N00.CNhs11124.650-25G431.32
skin, neonate N03.CNhs11215.662-22H369.54
skin, neonate N06.CNhs11097.693-20I579.62
skin, neonate N10.CNhs11108.762-6C487.49
small intestine, neonate N16.CNhs11114.790-21I124.19
spinal cord, adult.CNhs10505.24-13C984.92
spleen, adult.CNhs10465.25-2G25.64
spleen, embryo E16.CNhs11035.461-43C160.47
spleen, embryo E18.CNhs11011.1271-21F224.08
spleen, neonate N10.CNhs11116.752-24D18.85
spleen, neonate N20.CNhs11112.824-19H15.06
spleen, neonate N25.CNhs11099.1354-25G35.95
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H626.73
stomach, embryo E12.CNhs10588.356-43E331.48
stomach, embryo E15.CNhs10603.1252-16G830.90
stomach, embryo E16.CNhs11022.459-17D430.67
stomach, embryo E17.CNhs11006.1035-18D534.08
stomach, embryo E18.CNhs10999.1286-20C635.37
stomach, neonate N03.CNhs11193.1340-24B845.18
stomach, neonate N07.CNhs11210.718-18A953.97
stomach, neonate N25.CNhs11104.1355-25E438.48
stomach, neonate N30.CNhs11134.1386-42I125.40
submandibular gland, adult.CNhs10469.59-29C124.85
testis, adult.CNhs10504.57-7G555.24
testis, embryo E13.CNhs11031.389-23F514.20
testis, embryo E15.CNhs11034.443-27C514.39
testis, embryo E16.CNhs11033.470-26G58.94
testis, embryo E17.CNhs11029.486-18I55.30
testis, embryo E18.CNhs11027.503-18G55.24
testis, neonate N00.CNhs11189.1300-22B75.63
testis, neonate N07.CNhs11222.726-26I415.62
testis, neonate N10.CNhs11204.763-44D94.61
testis, neonate N20.CNhs11110.839-18H353.39
testis, neonate N30.CNhs11130.1391-42E240.90
thymus, adult.CNhs10471.38-12B52.84
thymus, embryo E14.CNhs11041.402-44I417.03
thymus, embryo E15.CNhs11005.430-45I210.07
thymus, embryo E16.CNhs11002.456-26C54.68
thymus, embryo E17.CNhs10581.478-18C14.48
thymus, embryo E18.CNhs10595.1273-19G43.77
thymus, neonate N02.CNhs11181.1541-43F82.76
thymus, neonate N03.CNhs11137.2104-43C72.51
thymus, neonate N06.CNhs11197.681-26C42.22
thymus, neonate N07.CNhs11211.713-19D32.67
thymus, neonate N10.CNhs11194.748-24E41.41
thymus, neonate N20.CNhs11186.820-7A21.75
thymus, neonate N25.CNhs11125.1362-25G73.08
thymus, neonate N30.CNhs11132.1393-42G23.16
tongue, adult.CNhs10499.32-1B419.95
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.72
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.18
urinary bladder, adult.CNhs10481.879-12E4234.15
uterus, adult pregnant day19.CNhs10497.590-15F538.66
uterus, adult.CNhs10509.92-27E532.05
vagina, adult.CNhs10502.89-27D518.01
vesicular gland, adult.CNhs10491.51-27F835.61
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A138.40
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A230.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A340.10
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D731.96
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A436.31
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A534.75
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A651.30
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A740.53
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A849.85
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A954.36
whole body, embryo E11.CNhs11014.324-5I870.78
whole body, embryo E12.CNhs10587.857-27C949.88
whole body, embryo E13.CNhs10512.372-23H266.42
whole body, embryo E14.5.CNhs10578.420-27D233.31
whole body, embryo E14.CNhs10519.395-14B147.79
whole body, embryo E16.CNhs10514.453-14F241.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G522.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G525.75
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G519.90
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G524.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G525.09
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G528.29
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G534.46
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G531.76
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G534.35
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G531.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G531.64
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G535.88
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G539.56
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G527.97
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G532.57
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G531.41
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G531.47
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G530.09
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G529.36
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G533.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G531.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G532.36
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G532.86
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G526.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G528.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G534.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G538.47
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G534.71
whole body, embryo E17.5.CNhs10513.490-9F931.64
whole body, embryo E17.CNhs10517.475-3I559.45
whole body, embryo E18.CNhs10516.493-3B329.01
whole body, neonate N00.CNhs10525.657-19C236.53
whole body, neonate N01.CNhs10576.659-23C628.88
whole body, neonate N06.CNhs10515.692-21D126.03
whole body, neonate N10.CNhs10518.761-6B412.98





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell4.54e-1744
neurectodermal cell4.54e-1744
neural cell1.76e-1643
CNS neuron (sensu Vertebrata)1.32e-1423
neuroblast (sensu Vertebrata)1.32e-1423
neuron3.10e-1233
neuronal stem cell3.10e-1233
neuroblast3.10e-1233
electrically signaling cell3.10e-1233
electrically responsive cell3.12e-1039
electrically active cell3.12e-1039
embryonic cell6.75e-0770

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure1.54e-3195
ectoderm1.54e-3195
presumptive ectoderm1.54e-3195
nervous system1.31e-2975
central nervous system2.36e-2973
ecto-epithelium1.61e-2673
regional part of nervous system6.71e-2554
neurectoderm5.84e-2464
neural plate5.84e-2464
presumptive neural plate5.84e-2464
neural tube6.59e-2452
neural rod6.59e-2452
future spinal cord6.59e-2452
neural keel6.59e-2452
brain2.41e-2047
future brain2.41e-2047
regional part of brain5.93e-2046
anterior neural tube1.38e-1740
pre-chordal neural plate1.69e-1749
regional part of forebrain4.55e-1739
forebrain4.55e-1739
future forebrain4.55e-1739
gray matter1.87e-1634
brain grey matter2.82e-1329
regional part of telencephalon2.82e-1329
telencephalon2.82e-1329
structure with developmental contribution from neural crest1.55e-1292
cerebral cortex7.42e-0921
cerebral hemisphere7.42e-0921
pallium7.42e-0921
embryo9.97e-09320
posterior neural tube6.07e-0712
chordal neural plate6.07e-0712
cavitated compound organ7.24e-0721
regional part of cerebral cortex8.54e-0717
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