Personal tools

FFCP PHASE1:Mm9::chr13:49404567..49404583,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=30938
|EntrezGene=30938
|HGNC=
|HGNC=
|MCL_coexpression_id=165
|MCL_coexpression_id=165
|TSSclassifier=NA
|UniProt=Q3TNB8
|UniProt=Q3TNB8
|association_with_transcript=0bp_to_NM_015759,uc007qjd.1_5end
|association_with_transcript=0bp_to_NM_015759,uc007qjd.1_5end
|cluster_id=chr13:49404567..49404583,-
|description=CAGE_peak_5_at_Fgd3_5end
|description=CAGE_peak_5_at_Fgd3_5end
|id=chr13:49404567..49404583,-
|id=chr13:49404567..49404583,-
|ontology_enrichment_celltype=CL:0000988!1.19e-11!32;CL:0002032!1.19e-11!32;CL:0000037!1.19e-11!32;CL:0000566!1.19e-11!32;CL:0000837!1.19e-11!32;CL:0002031!1.76e-09!25;CL:0000738!4.34e-08!17;CL:0002087!4.34e-08!17;CL:0000838!5.30e-07!12;CL:0002320!5.65e-07!46;CL:0000134!5.65e-07!46;CL:0000049!7.30e-07!19
|ontology_enrichment_celltype=CL:0000988!1.19e-11!32;CL:0002032!1.19e-11!32;CL:0000037!1.19e-11!32;CL:0000566!1.19e-11!32;CL:0000837!1.19e-11!32;CL:0002031!1.76e-09!25;CL:0000738!4.34e-08!17;CL:0002087!4.34e-08!17;CL:0000838!5.30e-07!12;CL:0002320!5.65e-07!46;CL:0000134!5.65e-07!46;CL:0000049!7.30e-07!19
|ontology_enrichment_celltype_v019_2=CL:0000988,1.15e-20,32;CL:0002032,1.15e-20,32;CL:0000037,1.15e-20,32;CL:0000837,1.15e-20,32;CL:0002031,3.01e-18,25;CL:0002320,3.18e-17,46;CL:0000134,3.18e-17,46;CL:0000738,1.75e-14,17;CL:0002087,1.75e-14,17;CL:0000219,1.13e-13,54;CL:0000838,2.19e-12,12;CL:0000542,2.92e-11,13;CL:0000051,2.92e-11,13;CL:0000084,9.77e-11,11;CL:0000827,9.77e-11,11;CL:0000049,1.25e-10,19;CL:0000034,1.38e-10,97;CL:0000723,9.24e-09,91;CL:0000048,9.24e-09,91;CL:0000791,4.65e-08,9;CL:0000789,4.65e-08,9;CL:0002420,4.65e-08,9;CL:0002419,4.65e-08,9;CL:0000790,4.65e-08,9;CL:0000839,1.57e-07,13;CL:0000763,2.45e-07,16;CL:0000553,4.01e-07,6;CL:0000556,4.01e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=DOID:0060100,9.25e-07,3;DOID:4045,9.25e-07,3
|ontology_enrichment_uberon=UBERON:0002193!2.21e-15!48;UBERON:0002405!1.05e-14!70;UBERON:0002390!4.68e-14!45;UBERON:0003061!4.68e-14!45;UBERON:0001474!6.17e-10!22;UBERON:0004765!6.17e-10!22;UBERON:0001434!6.17e-10!22;UBERON:0002371!1.03e-09!16;UBERON:0003081!3.88e-08!88;UBERON:0002204!1.07e-07!32;UBERON:0002384!5.65e-07!46
|ontology_enrichment_uberon=UBERON:0002193!2.21e-15!48;UBERON:0002405!1.05e-14!70;UBERON:0002390!4.68e-14!45;UBERON:0003061!4.68e-14!45;UBERON:0001474!6.17e-10!22;UBERON:0004765!6.17e-10!22;UBERON:0001434!6.17e-10!22;UBERON:0002371!1.03e-09!16;UBERON:0003081!3.88e-08!88;UBERON:0002204!1.07e-07!32;UBERON:0002384!5.65e-07!46
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.18e-17,46;UBERON:0001474,1.70e-14,22;UBERON:0004765,1.70e-14,22;UBERON:0001434,1.70e-14,22;UBERON:0002204,8.38e-14,32;UBERON:0002371,1.81e-13,16;UBERON:0002193,1.09e-12,48;UBERON:0002405,1.09e-12,48;UBERON:0002390,1.97e-12,45;UBERON:0003061,1.97e-12,45;UBERON:0002106,4.23e-09,6;UBERON:0004457,4.23e-09,6;UBERON:0000042,4.23e-09,6;UBERON:0004854,4.23e-09,6;UBERON:0009034,4.23e-09,6;UBERON:0002095,4.23e-09,6;UBERON:0004782,4.23e-09,6;UBERON:0003281,4.23e-09,6;UBERON:0009664,4.23e-09,6;UBERON:0002296,4.23e-09,6;UBERON:0005602,4.23e-09,6;UBERON:0001179,4.23e-09,6;UBERON:0006293,4.23e-09,6;UBERON:0003887,6.35e-07,10
|phase1_expression=0,0,0,0,0,0,0,2.84071311571468,1.12630977721333,1.40438715793196,0.34243593645101,0.0797721589953364,2.22560948910567,2.44777126773193,0.333109761815663,1.21485160433896,2.09868563438444,8.51747846467242,7.12995054749842,10.1853516431527,0.595303031057488,2.6808556824239,3.6567970479451,0.639969691173627,0.45881856213434,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,13.811543814318,10.1573594788094,17.7998072951091,38.2350467220159,28.0048648832963,23.7900072985265,0,0,0,0,0,0,0,0,0,21.8117387875057,8.70434570413613,4.36921938885203,0,0,0,0,0,0,0,0,4.49949858640699,4.94433181283487,2.1314403448383,1.79760066311043,0.384218305321555,0.103689612308478,0.135005938331691,0,0,0,0,0,0,1.10115880999389,0.127687338085188,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.91347103775248,4.40194402200192,0.29688427812965,0,0,0,0.301445281105245,0.117588707135705,0.251333182659351,0,0.433798070759735,3.5384422077995,0.970601099684455,2.87093973998512,1.93950101254089,0,0,0,0,3.23500836165985,2.99951365496704,1.52484272487678,0.149790639404823,0.457500602818626,0,0,0.511430914660661,0,0,0,2.11491850037158,0.252722758433675,0.420883711772948,0,0,0.180062129805349,0.150704817835715,0,0,0,0,0,0,0.175951124163949,0.219195732427575,0,0.696504333044333,0.205782136407943,0,0.702213187313235,2.31613116403244,0.568326998791185,0,0,0.180062061461015,0.23674473558521,0,0,0,0,0.116765342367169,0.16455984991348,0.164167464079095,0.0810688095458557,0.146199987425332,0.439100230582101,0.134206418760372,0,0,0,0.264450566663544,0,0,0.257734922644187,0,0,0,0.474529061544512,0,0.502670417600539,0.198956472041151,0.19496408711912,3.59527763461689,0.216138049874694,0.597423819763102,0,0,0,0.203651327845314,0,0,0.189709611372772,0.147610147979602,0,0.123397163921801,0,0.166845105716094,0.393117990226406,0.449724224769707,0.608580364165509,0.482354319504834,0.763877555344259,1.15078454980324,1.45921704097532,0.274561413188081,1.43768206527355,1.86070473834252,0.624075346229121,0,0.179397413521912,0.482443521363367,0.184753190166605,0,0,0,0,0,0.952174563544055,0,0.472905432318573,0.221464689648775,0.637819074629948,0.163863314715738,1.38147985492716,0.433947175744535,15.0791283939272,13.053736411649,0.491764273019036,0.275936746304732,0.321101179975584,0.586058432961016,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0.162886959353576,1.64970122972535,0,0.242780636154981,0,0,0,0.307435147943927,0.516856586336442,0,0.356497378384721,0.632073515871632,0,0,0,0,0.129358683782755,0,0,0,0.164549020602121,0,0,0,0,0.16488625294148,0,0.180938774784468,0.358117032009409,0.164140899745061,0,0,2.56306321196779,1.65109494370578,2.96311243791539,1.31857919903284,1.91371918809435,3.20289442489132,13.5982743995084,12.3157278044819,8.29199842826543,0,0.158167996790568,0,0,0,0.218362563746178,0,0,0,0.259229946583586,0.621339313086926,0,0.299033092087958,0,0,0.129159823477731,0,0,0,0,0,0,0.632022241256357,0,0.205421914329655,0.25984164595559,0.179026695667481,0.596044064343795,0.480781798079875,0.295379054349154,0.605798699688886,0.533447646584999,0.403304740547362,0.292373642219257,0.577271049841977,0.584384510907845,0,0,0,0,0,0.187682475451182,0.73260649706906,0,0,0,0,0,0,0,1.5107877947794,0,0,0,0,0.103787347584177,0,0.170733605754134,0.486213434136588,0,0,0.222246727801615,0.618105171716683,0.320919209591815,0,0.25347929989024,0,0.0936415074698824,0.448176066834085,0.17230640686684,0,0.347652977834566,0.192909220463705,0.412085900803307,0,0.342869252385415,0.70990322463735,0.238436189947321,0.145346416632329,0,0.25384382367503,0.548783918618318,0,0.135804113845862,0.561142271657738,0.237270036248348,0.197008964751127,0,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0.765153328275374,0.441182838239031,1.85494268496337
|phase1_expression=0,0,0,0,0,0,0,2.84071311571468,1.12630977721333,1.40438715793196,0.34243593645101,0.0797721589953364,2.22560948910567,2.44777126773193,0.333109761815663,1.21485160433896,2.09868563438444,8.51747846467242,7.12995054749842,10.1853516431527,0.595303031057488,2.6808556824239,3.6567970479451,0.639969691173627,0.45881856213434,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,13.811543814318,10.1573594788094,17.7998072951091,38.2350467220159,28.0048648832963,23.7900072985265,0,0,0,0,0,0,0,0,0,21.8117387875057,8.70434570413613,4.36921938885203,0,0,0,0,0,0,0,0,4.49949858640699,4.94433181283487,2.1314403448383,1.79760066311043,0.384218305321555,0.103689612308478,0.135005938331691,0,0,0,0,0,0,1.10115880999389,0.127687338085188,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.91347103775248,4.40194402200192,0.29688427812965,0,0,0,0.301445281105245,0.117588707135705,0.251333182659351,0,0.433798070759735,3.5384422077995,0.970601099684455,2.87093973998512,1.93950101254089,0,0,0,0,3.23500836165985,2.99951365496704,1.52484272487678,0.149790639404823,0.457500602818626,0,0,0.511430914660661,0,0,0,2.11491850037158,0.252722758433675,0.420883711772948,0,0,0.180062129805349,0.150704817835715,0,0,0,0,0,0,0.175951124163949,0.219195732427575,0,0.696504333044333,0.205782136407943,0,0.702213187313235,2.31613116403244,0.568326998791185,0,0,0.180062061461015,0.23674473558521,0,0,0,0,0.116765342367169,0.16455984991348,0.164167464079095,0.0810688095458557,0.146199987425332,0.439100230582101,0.134206418760372,0,0,0,0.264450566663544,0,0,0.257734922644187,0,0,0,0.474529061544512,0,0.502670417600539,0.198956472041151,0.19496408711912,3.59527763461689,0.216138049874694,0.597423819763102,0,0,0,0.203651327845314,0,0,0.189709611372772,0.147610147979602,0,0.123397163921801,0,0.166845105716094,0.393117990226406,0.449724224769707,0.608580364165509,0.482354319504834,0.763877555344259,1.15078454980324,1.45921704097532,0.274561413188081,1.43768206527355,1.86070473834252,0.624075346229121,0,0.179397413521912,0.482443521363367,0.184753190166605,0,0,0,0,0,0.952174563544055,0,0.472905432318573,0.221464689648775,0.637819074629948,0.163863314715738,1.38147985492716,0.433947175744535,15.0791283939272,13.053736411649,0.491764273019036,0.275936746304732,0.321101179975584,0.586058432961016,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0.162886959353576,1.64970122972535,0,0.242780636154981,0,0,0,0.307435147943927,0.516856586336442,0,0.356497378384721,0.632073515871632,0,0,0,0,0.129358683782755,0,0,0,0.164549020602121,0,0,0,0,0.16488625294148,0,0.180938774784468,0.358117032009409,0.164140899745061,0,0,2.56306321196779,1.65109494370578,2.96311243791539,1.31857919903284,1.91371918809435,3.20289442489132,13.5982743995084,12.3157278044819,8.29199842826543,0,0.158167996790568,0,0,0,0.218362563746178,0,0,0,0.259229946583586,0.621339313086926,0,0.299033092087958,0,0,0.129159823477731,0,0,0,0,0,0,0.632022241256357,0,0.205421914329655,0.25984164595559,0.179026695667481,0.596044064343795,0.480781798079875,0.295379054349154,0.605798699688886,0.533447646584999,0.403304740547362,0.292373642219257,0.577271049841977,0.584384510907845,0,0,0,0,0,0.187682475451182,0.73260649706906,0,0,0,0,0,0,0,1.5107877947794,0,0,0,0,0.103787347584177,0,0.170733605754134,0.486213434136588,0,0,0.222246727801615,0.618105171716683,0.320919209591815,0,0.25347929989024,0,0.0936415074698824,0.448176066834085,0.17230640686684,0,0.347652977834566,0.192909220463705,0.412085900803307,0,0.342869252385415,0.70990322463735,0.238436189947321,0.145346416632329,0,0.25384382367503,0.548783918618318,0,0.135804113845862,0.561142271657738,0.237270036248348,0.197008964751127,0,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0.765153328275374,0.441182838239031,1.85494268496337
|short_description=p5@Fgd3
|short_description=p5@Fgd3
}}
}}

Latest revision as of 16:57, 1 October 2015

Short description:p5@Fgd3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Fgd3_5end
Coexpression cluster:MCL_coexpression_mm9:165
Association with transcript: 0bp_to_NM_015759, uc007qjd.1_5end
EntrezGene:Fgd3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Fgd3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.23
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.45
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A28.52
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A47.13
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A610.19
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.66
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G813.81
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H110.16
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H317.80
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G938.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H228.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H423.79
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A221.81
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I98.70
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.37
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.50
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E74.94
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H94.40
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A62.87
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.52
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.11
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.32
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F41.46
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C71.38
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A115.08
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A113.05
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G61.65
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G22.56
spleen, embryo E16.CNhs11035.461-43C11.65
spleen, embryo E18.CNhs11011.1271-21F22.96
spleen, neonate N10.CNhs11116.752-24D11.32
spleen, neonate N20.CNhs11112.824-19H11.91
spleen, neonate N25.CNhs11099.1354-25G33.20
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C613.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C912.32
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D38.29
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.61
thymus, neonate N07.CNhs11211.713-19D30.53
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hematopoietic cell1.15e-2032
hematopoietic oligopotent progenitor cell1.15e-2032
hematopoietic stem cell1.15e-2032
hematopoietic multipotent progenitor cell1.15e-2032
hematopoietic lineage restricted progenitor cell3.01e-1825
connective tissue cell3.18e-1746
mesenchymal cell3.18e-1746
leukocyte1.75e-1417
nongranular leukocyte1.75e-1417
motile cell1.13e-1354
lymphoid lineage restricted progenitor cell2.19e-1212
lymphocyte2.92e-1113
common lymphoid progenitor2.92e-1113
T cell9.77e-1111
pro-T cell9.77e-1111
common myeloid progenitor1.25e-1019
stem cell1.38e-1097
somatic stem cell9.24e-0991
multi fate stem cell9.24e-0991
mature alpha-beta T cell4.65e-089
alpha-beta T cell4.65e-089
immature T cell4.65e-089
mature T cell4.65e-089
immature alpha-beta T cell4.65e-089
myeloid lineage restricted progenitor cell1.57e-0713
myeloid cell2.45e-0716
megakaryocyte progenitor cell4.01e-076
megakaryocyte4.01e-076

Disease
Ontology termp-valuen
musculoskeletal system cancer9.25e-073
muscle cancer9.25e-073
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr13:49404567..49404583,-&oldid=4312820"