FFCP PHASE1:Mm9::chr18:77804024..77804041,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:77804024..77804041,-
|short_description=p4@Rnf165
|description=CAGE_peak_4_at_Rnf165_5end
|association_with_transcript=-149bp_to_ENSMUST00000026494,NM_001...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=225743 | |EntrezGene=225743 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=E9QAU8 | |UniProt=E9QAU8 | ||
|association_with_transcript=-149bp_to_ENSMUST00000026494,NM_001164504,uc008frj.2,uc008frm.2_5end | |||
|cluster_id=chr18:77804024..77804041,- | |||
|description=CAGE_peak_4_at_Rnf165_5end | |||
|id=chr18:77804024..77804041,- | |||
|ontology_enrichment_celltype=CL:0000540!2.04e-19!33;CL:0000047!2.04e-19!33;CL:0000031!2.04e-19!33;CL:0000404!2.04e-19!33;CL:0000117!1.66e-14!23;CL:0000337!1.66e-14!23;CL:0000393!2.29e-14!39;CL:0000211!2.29e-14!39;CL:0000221!2.65e-14!44;CL:0000133!2.65e-14!44;CL:0002319!4.03e-14!43;CL:0000055!3.14e-10!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.26e-30,33;CL:0000047,2.26e-30,33;CL:0000031,2.26e-30,33;CL:0000404,2.26e-30,33;CL:0000393,4.01e-24,39;CL:0000211,4.01e-24,39;CL:0002319,1.89e-22,43;CL:0000221,1.05e-21,44;CL:0000133,1.05e-21,44;CL:0000117,1.50e-21,23;CL:0000337,1.50e-21,23;CL:0002321,4.75e-10,70;CL:0002609,1.27e-09,6;CL:0000107,7.88e-09,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.00e-27!102;UBERON:0000924!1.00e-27!102;UBERON:0006601!1.00e-27!102;UBERON:0001017!4.05e-27!73;UBERON:0005743!4.05e-27!73;UBERON:0000073!1.83e-25!75;UBERON:0001016!1.83e-25!75;UBERON:0002346!7.18e-24!71;UBERON:0003075!7.18e-24!71;UBERON:0007284!7.18e-24!71;UBERON:0000033!1.33e-22!63;UBERON:0003056!5.15e-20!49;UBERON:0001049!1.14e-18!52;UBERON:0005068!1.14e-18!52;UBERON:0006241!1.14e-18!52;UBERON:0007135!1.14e-18!52;UBERON:0002020!4.01e-18!34;UBERON:0000955!7.20e-18!50;UBERON:0006238!7.20e-18!50;UBERON:0002616!2.64e-17!49;UBERON:0003080!2.57e-16!40;UBERON:0002780!4.69e-16!39;UBERON:0001890!4.69e-16!39;UBERON:0006240!4.69e-16!39;UBERON:0002791!1.67e-15!29;UBERON:0003528!1.67e-15!29;UBERON:0001893!1.67e-15!29;UBERON:0007811!4.49e-12!86;UBERON:0000956!2.11e-11!21;UBERON:0001869!2.11e-11!21;UBERON:0000203!2.11e-11!21;UBERON:0000153!3.91e-11!94;UBERON:0002619!1.59e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.72e-32,73;UBERON:0004121,7.14e-31,95;UBERON:0000924,7.14e-31,95;UBERON:0006601,7.14e-31,95;UBERON:0001016,8.68e-31,75;UBERON:0002346,7.70e-26,64;UBERON:0003075,7.70e-26,64;UBERON:0007284,7.70e-26,64;UBERON:0002020,1.07e-24,34;UBERON:0010371,2.82e-22,73;UBERON:0003056,5.39e-22,49;UBERON:0000073,1.24e-20,54;UBERON:0003528,3.84e-20,29;UBERON:0002791,3.84e-20,29;UBERON:0001893,3.84e-20,29;UBERON:0001049,9.27e-18,52;UBERON:0005068,9.27e-18,52;UBERON:0006241,9.27e-18,52;UBERON:0007135,9.27e-18,52;UBERON:0002780,3.09e-17,39;UBERON:0001890,3.09e-17,39;UBERON:0006240,3.09e-17,39;UBERON:0003080,1.36e-16,40;UBERON:0010314,7.09e-16,92;UBERON:0000956,1.11e-15,21;UBERON:0001869,1.11e-15,21;UBERON:0000203,1.11e-15,21;UBERON:0000955,3.62e-15,47;UBERON:0006238,3.62e-15,47;UBERON:0002616,2.33e-14,46;UBERON:0002619,8.03e-11,17;UBERON:0002410,7.88e-09,9;UBERON:0000369,1.50e-07,5;UBERON:0002435,1.50e-07,5;UBERON:0000204,1.50e-07,5;UBERON:0010082,1.50e-07,5;UBERON:0002021,6.02e-07,10;UBERON:0000411,6.02e-07,10;UBERON:0001950,6.02e-07,10;UBERON:0000010,7.14e-07,11 | |||
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| ||
|short_description=p4@Rnf165 | |||
}} | }} |
Latest revision as of 18:05, 1 October 2015
Short description: | p4@Rnf165 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Rnf165_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | -149bp_to_ENSMUST00000026494, NM_001164504, uc008frj.2, uc008frm.2_5end |
EntrezGene: | Rnf165 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.26e-30 | 33 |
neuronal stem cell | 2.26e-30 | 33 |
neuroblast | 2.26e-30 | 33 |
electrically signaling cell | 2.26e-30 | 33 |
electrically responsive cell | 4.01e-24 | 39 |
electrically active cell | 4.01e-24 | 39 |
neural cell | 1.89e-22 | 43 |
ectodermal cell | 1.05e-21 | 44 |
neurectodermal cell | 1.05e-21 | 44 |
CNS neuron (sensu Vertebrata) | 1.50e-21 | 23 |
neuroblast (sensu Vertebrata) | 1.50e-21 | 23 |
embryonic cell | 4.75e-10 | 70 |
neuron of cerebral cortex | 1.27e-09 | 6 |
autonomic neuron | 7.88e-09 | 9 |