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FFCP PHASE1:Mm9::chr5:121670414..121670424,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr5:121670414..121670424,+
|DHSsupport=NA
|short_description=p3@Gm15800
|DPIdataset=NA
|description=CAGE_peak_3_at_Gm15800_5end
|association_with_transcript=186bp_to_ENSMUST00000119892,NM_181421_5end
|EntrezGene=269700
|EntrezGene=269700
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=E9PX61
|UniProt=E9PX61
|association_with_transcript=186bp_to_ENSMUST00000119892,NM_181421_5end
|cluster_id=chr5:121670414..121670424,+
|description=CAGE_peak_3_at_Gm15800_5end
|id=chr5:121670414..121670424,+
|ontology_enrichment_celltype=CL:0000117!8.50e-10!23;CL:0000337!8.50e-10!23;CL:0000540!1.77e-08!33;CL:0000047!1.77e-08!33;CL:0000031!1.77e-08!33;CL:0000404!1.77e-08!33
|ontology_enrichment_celltype_v019_2=CL:0000117,4.13e-12,23;CL:0000337,4.13e-12,23;CL:0000540,7.98e-09,33;CL:0000047,7.98e-09,33;CL:0000031,7.98e-09,33;CL:0000404,7.98e-09,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!1.17e-15!34;UBERON:0001017!6.15e-14!73;UBERON:0005743!6.15e-14!73;UBERON:0000073!6.92e-13!75;UBERON:0001016!6.92e-13!75;UBERON:0002791!8.16e-13!29;UBERON:0003528!8.16e-13!29;UBERON:0001893!8.16e-13!29;UBERON:0001049!1.86e-12!52;UBERON:0005068!1.86e-12!52;UBERON:0006241!1.86e-12!52;UBERON:0007135!1.86e-12!52;UBERON:0000955!2.32e-11!50;UBERON:0006238!2.32e-11!50;UBERON:0002616!7.12e-11!49;UBERON:0000033!8.69e-11!63;UBERON:0003080!4.64e-10!40;UBERON:0002780!1.33e-09!39;UBERON:0001890!1.33e-09!39;UBERON:0006240!1.33e-09!39;UBERON:0004121!1.38e-09!102;UBERON:0000924!1.38e-09!102;UBERON:0006601!1.38e-09!102;UBERON:0000956!2.34e-09!21;UBERON:0001869!2.34e-09!21;UBERON:0000203!2.34e-09!21;UBERON:0002346!2.76e-09!71;UBERON:0003075!2.76e-09!71;UBERON:0007284!2.76e-09!71;UBERON:0003056!1.09e-08!49;UBERON:0002619!1.87e-08!17;UBERON:0002021!5.87e-08!10;UBERON:0000411!5.87e-08!10;UBERON:0001950!5.87e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.56e-20,34;UBERON:0000073,6.16e-19,54;UBERON:0001017,1.08e-18,73;UBERON:0001016,9.93e-18,75;UBERON:0001049,1.80e-17,52;UBERON:0005068,1.80e-17,52;UBERON:0006241,1.80e-17,52;UBERON:0007135,1.80e-17,52;UBERON:0003528,2.35e-16,29;UBERON:0002791,2.35e-16,29;UBERON:0001893,2.35e-16,29;UBERON:0002346,8.77e-15,64;UBERON:0003075,8.77e-15,64;UBERON:0007284,8.77e-15,64;UBERON:0000955,4.39e-14,47;UBERON:0006238,4.39e-14,47;UBERON:0002616,2.20e-13,46;UBERON:0004121,3.84e-13,95;UBERON:0000924,3.84e-13,95;UBERON:0006601,3.84e-13,95;UBERON:0003080,8.92e-13,40;UBERON:0002780,4.05e-12,39;UBERON:0001890,4.05e-12,39;UBERON:0006240,4.05e-12,39;UBERON:0000956,4.20e-12,21;UBERON:0001869,4.20e-12,21;UBERON:0000203,4.20e-12,21;UBERON:0002619,1.03e-11,17;UBERON:0011216,1.80e-11,194;UBERON:0010371,3.17e-11,73;UBERON:0002021,3.64e-11,10;UBERON:0000411,3.64e-11,10;UBERON:0001950,3.64e-11,10;UBERON:0003056,5.00e-10,49;UBERON:0000025,5.27e-07,114;UBERON:0010314,8.95e-07,92
|phase1_expression=0.640595388419176,0.697950815278722,1.81999695755814,2.72217790176147,4.50806156951712,1.17515490338323,0.934450562382103,0.258246646883153,0.140788722151667,1.17032263160997,0,0,0.171200729931206,0.34968160967599,5.99597571268193,4.656931149966,1.39912375625629,0.315462165358238,0.411343300817216,0.42438965179803,1.19060606211498,0.0992909512008853,0.261199789138935,0.47997726838022,1.14704640533585,1.72269589234506,1.7230479846363,1.72376986148711,1.14014051673824,1.51218077855958,0.886922042621219,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.183546752161682,0,0,0.219686182734472,0.388859798148567,0.139986421625363,1.43752564364972,0.167782606057736,0,0.336093799142464,0.257259436035947,0.85960031981627,0.515672092277442,3.64169629547276,1.5869729378161,1.26766280701236,0,0,0.449949858640699,0,0,0,1.15265491596466,0.933206510776299,1.4850653216486,1.05162480675691,5.71301968807607,6.40518768759679,1.95985278743926,2.68367318851062,1.83843757322004,2.20231761998777,2.80912143787413,2.76491759861238,2.50583946687368,2.8361169516747,3.64639359389732,0.837548997004143,3.93933827022176,3.20876320331301,3.24091444021034,3.98640706237488,3.35519002485541,0,0.226714680320357,0.869593466105033,0,0,0,0.649776417447669,0.448026887097336,1.12355536105401,0,0,0,0.845060518660083,1.28326477414318,0,0,0,0,0,0.79928715803342,0,0,0.693941307064543,0.304465478312141,0.461230994512117,0.150722640552623,0.470354828542819,0.251333182659351,0.494389935468748,0.433798070759735,5.30766331169925,0.647067399789637,2.87093973998512,2.90925151881133,3.72783522436244,1.75668478206928,2.72280718857492,0.766371165625774,0,0,0,3.59497534571574,3.66000482254901,7.28795242254614,4.69325664519146,3.58001640262463,3.53239675751252,3.89379031362618,0.509196819251581,1.36847667671102,0,0.210441855886474,0.260240885925407,0.459804208866946,0,0.452114453507145,0.680364991513279,1.2811372028485,0.655912071918102,1.29351685369508,0,0.189106080167819,0.527853372491847,0,0.834141747676794,1.0447564995665,0.61734640922383,0.398068533636986,0,0,0,0,0.703578179943289,0.180062061461015,0.710234206755631,0,0.462801338662135,0.232533944750408,0,0.116765342367169,0,0,0.243206428637567,0.292399974850665,0.439100230582101,0,5.67782861123144,2.57261530948211,1.32167513193519,1.05780226665418,0.213288250535234,0.464473343720877,0.257734922644187,0.201683524623343,0,0.760902504450237,2.37264530772256,0.494096864172033,0.754005626400808,0,0.58489226135736,0,0.864552199498777,1.7922714592893,0.189667900953082,0.342745537829186,1.1270773567308,0,0.193952487167626,0.210407459670956,0.632365371242573,0.442830443938806,0.31399745568275,0.370191491765402,0,1.83529616287703,3.34150291692445,4.72210436008193,5.47722327748958,7.47649195232492,5.0925170356284,3.45235364940973,2.7562988551756,2.19649130550465,0,1.48856379067401,0.312037673114561,0.252578877947112,0.179397413521912,0.482443521363367,0,0.37898282354097,0,0.169745085775188,0,0.335012514883631,0.476087281772027,0.975668239288994,0.157635144106191,0.44292937929755,0.637819074629948,0.491589944147214,1.03610989119537,0.289298117163023,0,0,0,0.275936746304732,1.28440471990234,1.28932855251423,0,0.504941854408746,1.57754109708128,0,1.29254038639679,0.955875191810208,0.445597348164788,0.849229592366497,1.61924280669958,0,0.790575555893047,3.85585579706168,0,0.534196811001766,0.488660878060728,0.494910368917606,2.65490276679926,0,0.302323556964751,0.188605079755898,0.590603785761546,0.307435147943927,0,0.363533729477506,0.356497378384721,0.316036757935816,0,4.12542172992747,0,0.18006109403131,0.776152102696527,0.428674070063185,0,0.178368817602071,0.493647061806363,0.304464949114599,0,0.42366414172764,0.661585194164886,0.16488625294148,0.968786560175433,0.603129249281559,0.119372344003136,0.164140899745061,0.874442509889552,1.29797711407357,3.75915937755276,0.619160603889667,1.48155621895769,3.76736914009382,5.87785179200408,5.0331198105435,0,0.139951452323658,0.276399947608848,0,0.316335993581135,0.406638934253697,0.432021363287205,0.418176592028937,0.218362563746178,0.404593039154462,0.330613822901344,0,1.29614973291793,1.86401793926078,0,0.149516546043979,0,0.194451188344048,0.387479470433193,0.506868376472335,0.234714477291508,0.13020438484395,0,0,0,0.632022241256357,0,0.102710957164827,0.129920822977795,0.358053391334963,0.39736270956253,0.120195449519969,0.295379054349154,0.302899349844443,0.304827226619999,0.403304740547362,0.292373642219257,0.481059208201647,0.233753804363138,1.36038230169127,0.665957860122194,0.179427713218951,0.335769232728157,0.19318959403219,0.187682475451182,0.36630324853453,0.214368379079066,0.501572104035363,6.21227026878773,6.90487854760765,4.58316410751517,8.59265911718438,7.53590771747707,6.7985450765073,4.72515750162264,5.85417564191487,5.43770890781046,8.28416498802912,0.207574695168353,0.399024873401031,1.19513524027894,2.91728060481953,0.838452650511929,0.919217542250071,1.55572709461131,0.618105171716683,0.64183841918363,1.0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|phase1_expression=0.640595388419176,0.697950815278722,1.81999695755814,2.72217790176147,4.50806156951712,1.17515490338323,0.934450562382103,0.258246646883153,0.140788722151667,1.17032263160997,0,0,0.171200729931206,0.34968160967599,5.99597571268193,4.656931149966,1.39912375625629,0.315462165358238,0.411343300817216,0.42438965179803,1.19060606211498,0.0992909512008853,0.261199789138935,0.47997726838022,1.14704640533585,1.72269589234506,1.7230479846363,1.72376986148711,1.14014051673824,1.51218077855958,0.886922042621219,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.183546752161682,0,0,0.219686182734472,0.388859798148567,0.139986421625363,1.43752564364972,0.167782606057736,0,0.336093799142464,0.257259436035947,0.85960031981627,0.515672092277442,3.64169629547276,1.5869729378161,1.26766280701236,0,0,0.449949858640699,0,0,0,1.15265491596466,0.933206510776299,1.4850653216486,1.05162480675691,5.71301968807607,6.40518768759679,1.95985278743926,2.68367318851062,1.83843757322004,2.20231761998777,2.80912143787413,2.76491759861238,2.50583946687368,2.8361169516747,3.64639359389732,0.837548997004143,3.93933827022176,3.20876320331301,3.24091444021034,3.98640706237488,3.35519002485541,0,0.226714680320357,0.869593466105033,0,0,0,0.649776417447669,0.448026887097336,1.12355536105401,0,0,0,0.845060518660083,1.28326477414318,0,0,0,0,0,0.79928715803342,0,0,0.693941307064543,0.304465478312141,0.461230994512117,0.150722640552623,0.470354828542819,0.251333182659351,0.494389935468748,0.433798070759735,5.30766331169925,0.647067399789637,2.87093973998512,2.90925151881133,3.72783522436244,1.75668478206928,2.72280718857492,0.766371165625774,0,0,0,3.59497534571574,3.66000482254901,7.28795242254614,4.69325664519146,3.58001640262463,3.53239675751252,3.89379031362618,0.509196819251581,1.36847667671102,0,0.210441855886474,0.260240885925407,0.459804208866946,0,0.452114453507145,0.680364991513279,1.2811372028485,0.655912071918102,1.29351685369508,0,0.189106080167819,0.527853372491847,0,0.834141747676794,1.0447564995665,0.61734640922383,0.398068533636986,0,0,0,0,0.703578179943289,0.180062061461015,0.710234206755631,0,0.462801338662135,0.232533944750408,0,0.116765342367169,0,0,0.243206428637567,0.292399974850665,0.439100230582101,0,5.67782861123144,2.57261530948211,1.32167513193519,1.05780226665418,0.213288250535234,0.464473343720877,0.257734922644187,0.201683524623343,0,0.760902504450237,2.37264530772256,0.494096864172033,0.754005626400808,0,0.58489226135736,0,0.864552199498777,1.7922714592893,0.189667900953082,0.342745537829186,1.1270773567308,0,0.193952487167626,0.210407459670956,0.632365371242573,0.442830443938806,0.31399745568275,0.370191491765402,0,1.83529616287703,3.34150291692445,4.72210436008193,5.47722327748958,7.47649195232492,5.0925170356284,3.45235364940973,2.7562988551756,2.19649130550465,0,1.48856379067401,0.312037673114561,0.252578877947112,0.179397413521912,0.482443521363367,0,0.37898282354097,0,0.169745085775188,0,0.335012514883631,0.476087281772027,0.975668239288994,0.157635144106191,0.44292937929755,0.637819074629948,0.491589944147214,1.03610989119537,0.289298117163023,0,0,0,0.275936746304732,1.28440471990234,1.28932855251423,0,0.504941854408746,1.57754109708128,0,1.29254038639679,0.955875191810208,0.445597348164788,0.849229592366497,1.61924280669958,0,0.790575555893047,3.85585579706168,0,0.534196811001766,0.488660878060728,0.494910368917606,2.65490276679926,0,0.302323556964751,0.188605079755898,0.590603785761546,0.307435147943927,0,0.363533729477506,0.356497378384721,0.316036757935816,0,4.12542172992747,0,0.18006109403131,0.776152102696527,0.428674070063185,0,0.178368817602071,0.493647061806363,0.304464949114599,0,0.42366414172764,0.661585194164886,0.16488625294148,0.968786560175433,0.603129249281559,0.119372344003136,0.164140899745061,0.874442509889552,1.29797711407357,3.75915937755276,0.619160603889667,1.48155621895769,3.76736914009382,5.87785179200408,5.0331198105435,0,0.139951452323658,0.276399947608848,0,0.316335993581135,0.406638934253697,0.432021363287205,0.418176592028937,0.218362563746178,0.404593039154462,0.330613822901344,0,1.29614973291793,1.86401793926078,0,0.149516546043979,0,0.194451188344048,0.387479470433193,0.506868376472335,0.234714477291508,0.13020438484395,0,0,0,0.632022241256357,0,0.102710957164827,0.129920822977795,0.358053391334963,0.39736270956253,0.120195449519969,0.295379054349154,0.302899349844443,0.304827226619999,0.403304740547362,0.292373642219257,0.481059208201647,0.233753804363138,1.36038230169127,0.665957860122194,0.179427713218951,0.335769232728157,0.19318959403219,0.187682475451182,0.36630324853453,0.214368379079066,0.501572104035363,6.21227026878773,6.90487854760765,4.58316410751517,8.59265911718438,7.53590771747707,6.7985450765073,4.72515750162264,5.85417564191487,5.43770890781046,8.28416498802912,0.207574695168353,0.399024873401031,1.19513524027894,2.91728060481953,0.838452650511929,0.919217542250071,1.55572709461131,0.618105171716683,0.64183841918363,1.0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|short_description=p3@Gm15800
}}
}}

Latest revision as of 19:22, 1 October 2015

Short description:p3@Gm15800
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Gm15800_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 186bp_to_ENSMUST00000119892, NM_181421_5end
EntrezGene:Gm15800
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Gm15800

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.72
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A16.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.66
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I21.72
Ileum epithelium, pool1.CNhs13199.10252-104B91.14
Ileum epithelium, pool2.CNhs13232.10253-104C11.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C33.64
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.93
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.49
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.41
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.96
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.68
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.81
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.51
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.84
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.21
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.36
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G25.31
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A62.87
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I22.72
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.59
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F17.29
cortex, adult.CNhs10473.12-14D54.69
cortex, neonate N30.CNhs11107.1392-42F23.58
diencephalon, adult.CNhs10482.20-12F23.53
diencephalon, neonate N30.CNhs11201.1388-42B23.89
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.37
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.68
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E85.68
hippocampus, neonate N00.CNhs11228.627-43G12.57
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G11.79
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.63
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.84
liver, embryo E13.CNhs10524.378-3H63.34
liver, embryo E14.CNhs10594.409-16E14.72
liver, embryo E15.CNhs10520.433-16D75.48
liver, embryo E16.CNhs10523.462-17F57.48
liver, embryo E17.CNhs10510.481-18A35.09
liver, embryo E18.CNhs10579.499-43G43.45
liver, neonate N00.CNhs11117.641-24F42.76
liver, neonate N03.CNhs11123.1345-25G22.20
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A31.29
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I93.86
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H30.60
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G23.76
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F21.48
spleen, neonate N10.CNhs11116.752-24D13.77
spleen, neonate N20.CNhs11112.824-19H15.88
spleen, neonate N25.CNhs11099.1354-25G35.03
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I11.30
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.90
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.59
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A47.54
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.85
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.44
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.28
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D22.92
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.86
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.48
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.13e-1223
neuroblast (sensu Vertebrata)4.13e-1223
neuron7.98e-0933
neuronal stem cell7.98e-0933
neuroblast7.98e-0933
electrically signaling cell7.98e-0933

Uber anatomy
Ontology termp-valuen
gray matter1.56e-2034
regional part of nervous system6.16e-1954
central nervous system1.08e-1873
nervous system9.93e-1875
neural tube1.80e-1752
neural rod1.80e-1752
future spinal cord1.80e-1752
neural keel1.80e-1752
brain grey matter2.35e-1629
regional part of telencephalon2.35e-1629
telencephalon2.35e-1629
neurectoderm8.77e-1564
neural plate8.77e-1564
presumptive neural plate8.77e-1564
brain4.39e-1447
future brain4.39e-1447
regional part of brain2.20e-1346
ectoderm-derived structure3.84e-1395
ectoderm3.84e-1395
presumptive ectoderm3.84e-1395
anterior neural tube8.92e-1340
regional part of forebrain4.05e-1239
forebrain4.05e-1239
future forebrain4.05e-1239
cerebral cortex4.20e-1221
cerebral hemisphere4.20e-1221
pallium4.20e-1221
regional part of cerebral cortex1.03e-1117
organ system subdivision1.80e-11194
ecto-epithelium3.17e-1173
occipital lobe3.64e-1110
visual cortex3.64e-1110
neocortex3.64e-1110
pre-chordal neural plate5.00e-1049
tube5.27e-07114
structure with developmental contribution from neural crest8.95e-0792
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