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FFCP PHASE1:Mm9::chr6:85978686..85978703,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=11519
|EntrezGene=11519
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q9QYB8
|UniProt=Q9QYB8
|association_with_transcript=-18bp_to_uc009crc.1,uc009crd.1,uc009cre.1,uc009crf.1_5end
|association_with_transcript=-18bp_to_uc009crc.1,uc009crd.1,uc009cre.1,uc009crf.1_5end
|cluster_id=chr6:85978686..85978703,+
|description=CAGE_peak_3_at_Add2_5end
|description=CAGE_peak_3_at_Add2_5end
|id=chr6:85978686..85978703,+
|id=chr6:85978686..85978703,+
|ontology_enrichment_celltype=CL:0000540!1.53e-14!33;CL:0000047!1.53e-14!33;CL:0000031!1.53e-14!33;CL:0000404!1.53e-14!33;CL:0000117!3.66e-14!23;CL:0000337!3.66e-14!23;CL:0000393!2.34e-12!39;CL:0000211!2.34e-12!39;CL:0002319!4.77e-11!43;CL:0000221!4.86e-11!44;CL:0000133!4.86e-11!44;CL:0000055!3.60e-09!50
|ontology_enrichment_celltype=CL:0000540!1.53e-14!33;CL:0000047!1.53e-14!33;CL:0000031!1.53e-14!33;CL:0000404!1.53e-14!33;CL:0000117!3.66e-14!23;CL:0000337!3.66e-14!23;CL:0000393!2.34e-12!39;CL:0000211!2.34e-12!39;CL:0002319!4.77e-11!43;CL:0000221!4.86e-11!44;CL:0000133!4.86e-11!44;CL:0000055!3.60e-09!50
|ontology_enrichment_celltype_v019_2=CL:0000117,2.23e-18,23;CL:0000337,2.23e-18,23;CL:0000540,2.39e-18,33;CL:0000047,2.39e-18,33;CL:0000031,2.39e-18,33;CL:0000404,2.39e-18,33;CL:0000393,6.04e-16,39;CL:0000211,6.04e-16,39;CL:0002319,5.78e-13,43;CL:0000221,2.09e-12,44;CL:0000133,2.09e-12,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!3.52e-28!75;UBERON:0001016!3.52e-28!75;UBERON:0001017!9.42e-28!73;UBERON:0005743!9.42e-28!73;UBERON:0004121!2.92e-27!102;UBERON:0000924!2.92e-27!102;UBERON:0006601!2.92e-27!102;UBERON:0002346!5.07e-27!71;UBERON:0003075!5.07e-27!71;UBERON:0007284!5.07e-27!71;UBERON:0001049!7.02e-23!52;UBERON:0005068!7.02e-23!52;UBERON:0006241!7.02e-23!52;UBERON:0007135!7.02e-23!52;UBERON:0000033!3.05e-22!63;UBERON:0000955!3.74e-22!50;UBERON:0006238!3.74e-22!50;UBERON:0002616!1.43e-21!49;UBERON:0003056!4.02e-21!49;UBERON:0003080!2.23e-18!40;UBERON:0002020!2.76e-18!34;UBERON:0002780!9.90e-18!39;UBERON:0001890!9.90e-18!39;UBERON:0006240!9.90e-18!39;UBERON:0002791!1.08e-15!29;UBERON:0003528!1.08e-15!29;UBERON:0001893!1.08e-15!29;UBERON:0000956!6.38e-11!21;UBERON:0001869!6.38e-11!21;UBERON:0000203!6.38e-11!21;UBERON:0007811!2.44e-09!86;UBERON:0002619!1.02e-08!17;UBERON:0000153!2.14e-08!94;UBERON:0002021!2.77e-08!10;UBERON:0000411!2.77e-08!10;UBERON:0001950!2.77e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.33e-34,75;UBERON:0001017,3.54e-33,73;UBERON:0002346,3.86e-33,64;UBERON:0003075,3.86e-33,64;UBERON:0007284,3.86e-33,64;UBERON:0000073,1.15e-30,54;UBERON:0004121,5.02e-30,95;UBERON:0000924,5.02e-30,95;UBERON:0006601,5.02e-30,95;UBERON:0001049,1.08e-28,52;UBERON:0005068,1.08e-28,52;UBERON:0006241,1.08e-28,52;UBERON:0007135,1.08e-28,52;UBERON:0010371,2.77e-26,73;UBERON:0003056,7.20e-26,49;UBERON:0000955,5.37e-25,47;UBERON:0006238,5.37e-25,47;UBERON:0002020,9.22e-25,34;UBERON:0002616,3.05e-24,46;UBERON:0003080,5.01e-23,40;UBERON:0002780,3.60e-22,39;UBERON:0001890,3.60e-22,39;UBERON:0006240,3.60e-22,39;UBERON:0003528,2.75e-21,29;UBERON:0002791,2.75e-21,29;UBERON:0001893,2.75e-21,29;UBERON:0010314,3.07e-19,92;UBERON:0000956,7.11e-15,21;UBERON:0001869,7.11e-15,21;UBERON:0000203,7.11e-15,21;UBERON:0002619,6.47e-12,17;UBERON:0002021,1.56e-10,10;UBERON:0000411,1.56e-10,10;UBERON:0001950,1.56e-10,10;UBERON:0002420,1.36e-07,8;UBERON:0007245,1.36e-07,8;UBERON:0010009,1.36e-07,8;UBERON:0010011,1.36e-07,8;UBERON:0000454,1.36e-07,8
|phase1_expression=0,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,4.93251082876205,0,0,0.159992422793407,0,0,0,0,0,0,0,0,1.23012957516914,0,0,0,0,0,0,0,0,0,0,4.78407908307194,2.73717714292689,0.367093504323363,0,0.436050312760893,0,0,0.139986421625363,0,0,0,0,0,0,0,23.2663929988537,36.5003775697703,32.9592329823213,1.0165335962074,0,0,0.988866362566974,0,0.599200221036809,0.768436610643109,14.7239249478038,20.7909145030804,15.5640471400023,11.4260393761521,10.3808214247258,18.4961106814581,17.7314121383737,20.2228133054205,37.4393995397922,21.8345348125671,21.1977015893616,22.8163277773235,21.7740591773735,20.8365348222704,15.6342479440773,12.9435400307286,16.0438160165651,16.2045722010517,13.5253096759148,18.6399445825301,1.59025005999687,1.88928900266964,0,0,0,0,0,0,0.842666520790511,0,0,0,0.563373679106722,0,0,0,0,0,0.505524445014783,1.02765491747154,0,0.148442139064825,1.21439728736295,0.913396434936424,1.38369298353635,1.95939432718409,1.41106448562846,0.376999773989026,0.741584903203122,0.144599356919912,0,0.323533699894818,0.220841518460394,0,0,15.8101630386235,12.5668024088073,0,0,0,0,22.1690146319138,45.7500602818627,30.7853162676518,32.8527965163402,28.3844157636667,18.0775598766817,21.9025705141473,0,0.124406970610093,0,0.631325567659422,1.17108398666433,3.21862946206862,3.78130472591233,3.61691562805716,3.53789795586905,4.61209393025459,3.18585863503078,5.17406741478031,0.431135985865684,0.378212160335639,0.527853372491847,0.657587197282725,0,0.348252166522167,0,0.398068533636986,0,0,0,0,0.703578179943289,0,0,0.196764231747404,0,0.232533944750408,0.268273401399619,0.116765342367169,0,0.164167464079095,0.0810688095458557,0.292399974850665,0,0,39.5345103300559,19.9634948015812,0.991256348951394,0,0.639864751605702,0.232236671860439,0.257734922644187,0.605050573870028,0.444756087689741,0,0.474529061544512,0.329397909448022,0,0.198956472041151,0.19496408711912,0,0,0.398282546508734,0.189667900953082,0.913988100877831,1.1270773567308,0.407302655690628,0.581857461502877,0.420814919341911,0.505892296994058,0.147610147979602,0.31399745568275,0,0,0.166845105716094,0.393117990226406,0.224862112384854,0,0,0.25462585178142,0.287696137450811,0,0,0,0,0,0,0,0,0,0.189491411770485,0.488894929326078,0,0.234690248288502,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0.478364305972461,0,0.172684981865896,0,0,0,0,0,22.6376331882787,19.1055049145291,0,0.252470927204373,2.52406575533005,3.90438744296638,2.58508077279359,1.43381278771531,0.891194696329576,2.83076530788832,2.42886421004937,2.63030272120181,2.76701444562566,16.3873871375122,0.283880170416537,0.178065603667255,0,0.329940245945071,0,0.728341908464944,0.906970670894253,0,0.295301892880773,0,0.258428293168221,0,0,0.316036757935816,0,0,6.12791290356818,1.08036656418786,1.29358683782755,0.643011105094777,0.709360934569094,1.96205699362278,1.97458824722545,2.43571959291679,0.938686832254841,0.847328283455281,0.220528398054962,0.32977250588296,0,0.0603129249281559,0.238744688006273,0.164140899745061,0,19.655082013114,0,0.206386867963223,0,0.188368457004691,0,0,0,0,0,0,1.73984796469624,0.609958401380546,0.108005340821801,1.25452977608681,0.436725127492355,0.404593039154462,0.247960367176008,0,0,0,0,0.149516546043979,0,0.194451188344048,0,0.337912250981556,0.352071715937262,0,0.104859344425711,0,0,0,0.405450430580328,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579568782096571,1.12609485270709,6.04400360081975,3.21552568618599,0,31.0613513439387,35.9053684475598,36.092417346682,24.4031518928036,26.718218271055,35.5035131773159,35.1011700120539,29.7211994127986,28.5479717660049,39.3497836931383,1.14166082342594,2.79317411380722,4.78054096111576,2.43106717068294,3.35381060204772,3.30918315210025,3.33370091702423,5.56294654545014,4.49286893428541,3.79045817645696,4.30914809813408,3.2066478035633,2.80924522409647,3.3293079250532,3.10151532360312,3.81034953026459,3.70829843023538,2.12200142510076,2.06042950401653,3.67997300335993,5.14303878578123,2.30718548007139,3.09967046931517,3.34296758254356,3.29382831453657,3.46919892355874,2.74391959309159,3.15683653725411,3.39510284614654,2.80571135828869,2.96587545310435,2.75812550651578,3.6830793885272,4.02835787083512,3.08650577569826,9.74261253957989,3.04111090979031,0.859484216193193,1.14772999241306,1.10295709559758,0.927471342481686
|phase1_expression=0,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,4.93251082876205,0,0,0.159992422793407,0,0,0,0,0,0,0,0,1.23012957516914,0,0,0,0,0,0,0,0,0,0,4.78407908307194,2.73717714292689,0.367093504323363,0,0.436050312760893,0,0,0.139986421625363,0,0,0,0,0,0,0,23.2663929988537,36.5003775697703,32.9592329823213,1.0165335962074,0,0,0.988866362566974,0,0.599200221036809,0.768436610643109,14.7239249478038,20.7909145030804,15.5640471400023,11.4260393761521,10.3808214247258,18.4961106814581,17.7314121383737,20.2228133054205,37.4393995397922,21.8345348125671,21.1977015893616,22.8163277773235,21.7740591773735,20.8365348222704,15.6342479440773,12.9435400307286,16.0438160165651,16.2045722010517,13.5253096759148,18.6399445825301,1.59025005999687,1.88928900266964,0,0,0,0,0,0,0.842666520790511,0,0,0,0.563373679106722,0,0,0,0,0,0.505524445014783,1.02765491747154,0,0.148442139064825,1.21439728736295,0.913396434936424,1.38369298353635,1.95939432718409,1.41106448562846,0.376999773989026,0.741584903203122,0.144599356919912,0,0.323533699894818,0.220841518460394,0,0,15.8101630386235,12.5668024088073,0,0,0,0,22.1690146319138,45.7500602818627,30.7853162676518,32.8527965163402,28.3844157636667,18.0775598766817,21.9025705141473,0,0.124406970610093,0,0.631325567659422,1.17108398666433,3.21862946206862,3.78130472591233,3.61691562805716,3.53789795586905,4.61209393025459,3.18585863503078,5.17406741478031,0.431135985865684,0.378212160335639,0.527853372491847,0.657587197282725,0,0.348252166522167,0,0.398068533636986,0,0,0,0,0.703578179943289,0,0,0.196764231747404,0,0.232533944750408,0.268273401399619,0.116765342367169,0,0.164167464079095,0.0810688095458557,0.292399974850665,0,0,39.5345103300559,19.9634948015812,0.991256348951394,0,0.639864751605702,0.232236671860439,0.257734922644187,0.605050573870028,0.444756087689741,0,0.474529061544512,0.329397909448022,0,0.198956472041151,0.19496408711912,0,0,0.398282546508734,0.189667900953082,0.913988100877831,1.1270773567308,0.407302655690628,0.581857461502877,0.420814919341911,0.505892296994058,0.147610147979602,0.31399745568275,0,0,0.166845105716094,0.393117990226406,0.224862112384854,0,0,0.25462585178142,0.287696137450811,0,0,0,0,0,0,0,0,0,0.189491411770485,0.488894929326078,0,0.234690248288502,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0.478364305972461,0,0.172684981865896,0,0,0,0,0,22.6376331882787,19.1055049145291,0,0.252470927204373,2.52406575533005,3.90438744296638,2.58508077279359,1.43381278771531,0.891194696329576,2.83076530788832,2.42886421004937,2.63030272120181,2.76701444562566,16.3873871375122,0.283880170416537,0.178065603667255,0,0.329940245945071,0,0.728341908464944,0.906970670894253,0,0.295301892880773,0,0.258428293168221,0,0,0.316036757935816,0,0,6.12791290356818,1.08036656418786,1.29358683782755,0.643011105094777,0.709360934569094,1.96205699362278,1.97458824722545,2.43571959291679,0.938686832254841,0.847328283455281,0.220528398054962,0.32977250588296,0,0.0603129249281559,0.238744688006273,0.164140899745061,0,19.655082013114,0,0.206386867963223,0,0.188368457004691,0,0,0,0,0,0,1.73984796469624,0.609958401380546,0.108005340821801,1.25452977608681,0.436725127492355,0.404593039154462,0.247960367176008,0,0,0,0,0.149516546043979,0,0.194451188344048,0,0.337912250981556,0.352071715937262,0,0.104859344425711,0,0,0,0.405450430580328,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579568782096571,1.12609485270709,6.04400360081975,3.21552568618599,0,31.0613513439387,35.9053684475598,36.092417346682,24.4031518928036,26.718218271055,35.5035131773159,35.1011700120539,29.7211994127986,28.5479717660049,39.3497836931383,1.14166082342594,2.79317411380722,4.78054096111576,2.43106717068294,3.35381060204772,3.30918315210025,3.33370091702423,5.56294654545014,4.49286893428541,3.79045817645696,4.30914809813408,3.2066478035633,2.80924522409647,3.3293079250532,3.10151532360312,3.81034953026459,3.70829843023538,2.12200142510076,2.06042950401653,3.67997300335993,5.14303878578123,2.30718548007139,3.09967046931517,3.34296758254356,3.29382831453657,3.46919892355874,2.74391959309159,3.15683653725411,3.39510284614654,2.80571135828869,2.96587545310435,2.75812550651578,3.6830793885272,4.02835787083512,3.08650577569826,9.74261253957989,3.04111090979031,0.859484216193193,1.14772999241306,1.10295709559758,0.927471342481686
|short_description=p3@Add2
|short_description=p3@Add2
}}
}}

Latest revision as of 20:08, 1 October 2015

Short description:p3@Add2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Add2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -18bp_to_uc009crc.1, uc009crd.1, uc009cre.1, uc009crf.1_5end
EntrezGene:Add2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Add2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.93
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.78
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.74
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C323.27
Mouse Granule cells, donor2.CNhs12357.11731-123E336.50
Mouse Granule cells, donor3.CNhs12108.11636-122C732.96
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D514.72
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F520.79
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D915.56
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F111.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D510.38
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D218.50
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F217.73
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D620.22
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D337.44
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F321.83
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D721.20
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D422.82
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F421.77
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D820.84
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E415.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E512.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I616.04
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D616.20
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F613.53
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E118.64
Mouse Schwann, donor1.CNhs12507.11728-123D91.59
Mouse Schwann, donor2.CNhs12573.11746-123F91.89
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.03
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F51.96
adrenal gland, neonate N00.CNhs11191.1311-23C11.41
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B215.81
cerebellum, neonate N30.CNhs11135.1395-42I212.57
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A422.17
corpus striatum, adult.CNhs10487.19-21D845.75
corpus striatum, neonate N00.CNhs11226.630-43F130.79
cortex, adult.CNhs10473.12-14D532.85
cortex, neonate N30.CNhs11107.1392-42F228.38
diencephalon, adult.CNhs10482.20-12F218.08
diencephalon, neonate N30.CNhs11201.1388-42B221.90
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E23.22
eyeball, embryo E15.CNhs10593.426-16C93.78
eyeball, embryo E17.CNhs11023.1261-18D43.62
eyeball, neonate N00.CNhs11207.633-15C63.54
eyeball, neonate N01.CNhs11140.1532-43E74.61
eyeball, neonate N02.CNhs11205.1551-44G83.19
eyeball, neonate N16.CNhs11188.777-19A25.17
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E839.53
hippocampus, neonate N00.CNhs11228.627-43G119.96
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.51
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C222.64
medulla oblongata, neonate N30.CNhs11200.1396-42A319.11
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.52
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.90
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.59
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.83
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.63
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I916.39
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G86.13
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C71.29
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F51.97
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C919.66
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.74
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E56.04
vagina, adult.CNhs10502.89-27D53.22
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A131.06
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A235.91
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A336.09
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D724.40
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A426.72
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A535.50
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A635.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A729.72
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A828.55
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A939.35
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H24.78
whole body, embryo E14.5.CNhs10578.420-27D22.43
whole body, embryo E14.CNhs10519.395-14B13.35
whole body, embryo E16.CNhs10514.453-14F23.31
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.79
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.31
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.10
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.14
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.10
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.47
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.40
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.97
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.03
whole body, embryo E17.5.CNhs10513.490-9F93.09
whole body, embryo E17.CNhs10517.475-3I59.74
whole body, embryo E18.CNhs10516.493-3B33.04
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.23e-1823
neuroblast (sensu Vertebrata)2.23e-1823
neuron2.39e-1833
neuronal stem cell2.39e-1833
neuroblast2.39e-1833
electrically signaling cell2.39e-1833
electrically responsive cell6.04e-1639
electrically active cell6.04e-1639
neural cell5.78e-1343
ectodermal cell2.09e-1244
neurectodermal cell2.09e-1244

Uber anatomy
Ontology termp-valuen
nervous system9.33e-3475
central nervous system3.54e-3373
neurectoderm3.86e-3364
neural plate3.86e-3364
presumptive neural plate3.86e-3364
regional part of nervous system1.15e-3054
ectoderm-derived structure5.02e-3095
ectoderm5.02e-3095
presumptive ectoderm5.02e-3095
neural tube1.08e-2852
neural rod1.08e-2852
future spinal cord1.08e-2852
neural keel1.08e-2852
ecto-epithelium2.77e-2673
pre-chordal neural plate7.20e-2649
brain5.37e-2547
future brain5.37e-2547
gray matter9.22e-2534
regional part of brain3.05e-2446
anterior neural tube5.01e-2340
regional part of forebrain3.60e-2239
forebrain3.60e-2239
future forebrain3.60e-2239
brain grey matter2.75e-2129
regional part of telencephalon2.75e-2129
telencephalon2.75e-2129
structure with developmental contribution from neural crest3.07e-1992
cerebral cortex7.11e-1521
cerebral hemisphere7.11e-1521
pallium7.11e-1521
regional part of cerebral cortex6.47e-1217
occipital lobe1.56e-1010
visual cortex1.56e-1010
neocortex1.56e-1010
basal ganglion1.36e-078
nuclear complex of neuraxis1.36e-078
aggregate regional part of brain1.36e-078
collection of basal ganglia1.36e-078
cerebral subcortex1.36e-078
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