FFCP PHASE1:Mm9::chr1:95949134..95949150,-: Difference between revisions
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{{FFCP|EntrezGene=18566|HGNC=|MCL_coexpression_id=68|UniProt=Q02242,Q544F3|association_with_transcript=-4bp_to_ENSMUST00000027507,NM_008798,uc007cev.1_5end|description=CAGE_peak_1_at_Pdcd1_5end|id=chr1:95949134..95949150,-|ontology_enrichment_celltype=CL:0000084!2.58e-11!11;CL:0000827!2.58e-11!11;CL:0000838!5.51e-10!12;CL:0000791!1.43e-09!9;CL:0000789!1.43e-09!9;CL:0002420!1.43e-09!9;CL:0002419!1.43e-09!9;CL:0000790!1.43e-09!9;CL:0000542!7.16e-09!13;CL:0000051!7.16e-09!13;CL:0000624!9.53e-09!8;CL:0000893!7.45e-07!6;CL:0002489!7.45e-07!6;CL:0000898!7.45e-07!6;CL:0000809!7.45e-07!6;CL:0000810!7.45e-07!6;CL:0000895!7.45e-07!6;CL:0000808!7.45e-07!6;CL:0000894!7.45e-07!6;CL:0000806!7.45e-07!6;CL:0000807!7.45e-07!6;CL:0000805!7.45e-07!6;CL:0002425!7.45e-07!6;CL:0002436!7.45e-07!6;CL:0002427!7.45e-07!6;CL:0002428!7.45e-07!6;CL:0002429!7.45e-07!6;CL:0002433!7.45e-07!6;CL:0002431!7.45e-07!6;CL:0002432!7.45e-07!6|ontology_enrichment_celltype_v019_2=CL:0000084,5.66e-32,11;CL:0000827,5.66e-32,11;CL:0000838,3.99e-29,12;CL:0000542,1.03e-26,13;CL:0000051,1.03e-26,13;CL:0000791,1.60e-26,9;CL:0000789,1.60e-26,9;CL:0002420,1.60e-26,9;CL:0002419,1.60e-26,9;CL:0000790,1.60e-26,9;CL:0000624,6.01e-24,8;CL:0000738,6.62e-20,17;CL:0002087,6.62e-20,17;CL:0000893,4.63e-18,6;CL:0002489,4.63e-18,6;CL:0000898,4.63e-18,6;CL:0000809,4.63e-18,6;CL:0000810,4.63e-18,6;CL:0000895,4.63e-18,6;CL:0000808,4.63e-18,6;CL:0000894,4.63e-18,6;CL:0000806,4.63e-18,6;CL:0000807,4.63e-18,6;CL:0000805,4.63e-18,6;CL:0002425,4.63e-18,6;CL:0002436,4.63e-18,6;CL:0002427,4.63e-18,6;CL:0002428,4.63e-18,6;CL:0002429,4.63e-18,6;CL:0002433,4.63e-18,6;CL:0002431,4.63e-18,6;CL:0002432,4.63e-18,6;CL:0002031,7.98e-13,25;CL:0000988,1.54e-09,32;CL:0002032,1.54e-09,32;CL:0000037,1.54e-09,32;CL:0000837,1.54e-09,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!2.87e-17!29;UBERON:0003408!6.22e-16!24;UBERON:0002370!2.92e-15!23;UBERON:0000974!2.92e-15!23;UBERON:0004807!2.92e-15!23;UBERON:0005058!2.92e-15!23;UBERON:0003351!2.92e-15!23;UBERON:0009113!2.92e-15!23;UBERON:0003295!2.92e-15!23;UBERON:0009722!2.92e-15!23;UBERON:0005562!2.92e-15!23;UBERON:0007690!2.92e-15!23;UBERON:0006562!2.98e-14!24;UBERON:0001557!2.98e-14!24;UBERON:0001042!2.98e-14!24;UBERON:0008814!2.98e-14!24;UBERON:0009145!2.98e-14!24;UBERON:0002193!3.30e-13!48;UBERON:0002390!1.75e-12!45;UBERON:0003061!1.75e-12!45;UBERON:0000072!1.05e-11!27;UBERON:0003081!1.46e-09!88;UBERON:0001004!4.73e-09!42;UBERON:0000065!1.61e-08!41;UBERON:0000063!4.97e-08!35;UBERON:0005057!1.60e-07!51;UBERON:0002405!4.30e-07!70|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.40e-48,23;UBERON:0000974,4.40e-48,23;UBERON:0004807,4.40e-48,23;UBERON:0005058,4.40e-48,23;UBERON:0003351,4.40e-48,23;UBERON:0009113,4.40e-48,23;UBERON:0003295,4.40e-48,23;UBERON:0009722,4.40e-48,23;UBERON:0005562,4.40e-48,23;UBERON:0007690,4.40e-48,23;UBERON:0006562,6.66e-46,24;UBERON:0003408,6.66e-46,24;UBERON:0001557,6.66e-46,24;UBERON:0001042,6.66e-46,24;UBERON:0008814,6.66e-46,24;UBERON:0009145,6.66e-46,24;UBERON:0004177,4.26e-41,29;UBERON:0005057,4.26e-41,29;UBERON:0000072,2.49e-40,27;UBERON:0000077,2.71e-33,35;UBERON:0007811,3.52e-29,36;UBERON:0002193,1.30e-25,48;UBERON:0002405,1.30e-25,48;UBERON:0000065,4.25e-25,41;UBERON:0002390,6.63e-25,45;UBERON:0003061,6.63e-25,45;UBERON:0001004,2.13e-24,42;UBERON:0000153,9.90e-24,43;UBERON:0003929,1.30e-17,55;UBERON:0002530,8.09e-16,65;UBERON:0002368,8.71e-16,60;UBERON:0000490,5.84e-14,66;UBERON:0003081,3.22e-13,87;UBERON:0005911,3.63e-13,69;UBERON:0000949,1.94e-12,72;UBERON:0001041,4.76e-12,80;UBERON:0000926,3.25e-09,120;UBERON:0004120,3.25e-09,120;UBERON:0006603,3.25e-09,120;UBERON:0004921,3.93e-07,114;UBERON:0001007,6.21e-07,116;UBERON:0001555,6.21e-07,116;UBERON:0007026,6.21e-07,116;UBERON:0001048,6.64e-07,134;UBERON:0004119,9.66e-07,118;UBERON:0000925,9.66e-07,118;UBERON:0006595,9.66e-07,118|phase1_expression=0,0,0,0,0,0,0.233612640595526,13.1705789910408,19.5696323790817,17.0867104215055,44.0030178339548,26.9629897404237,1.88320802924326,1.22388563386596,0.333109761815663,0.607425802169478,0,0.630924330716475,0.959801035240171,0,0.595303031057488,3.47518329203099,17.7615856614476,0,0.45881856213434,0,0.430761996159075,0,0,0,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.7608642603403,4.03312558970957,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0.142371680799103,0,1.4387976733305,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.34255163915718,5.69663344023778,0.29688427812965,0,0,0,0,0,0,1.23597483867187,0.433798070759735,0,0,0.220841518460394,0,0,0.292780797011547,0,0,0.718890747035522,0,0.254140454146129,0.149790639404823,0,0,0,0,0,0,0.305518091550949,0.248813941220186,0,0,0,0.229902104433473,0,0,0,0,0.0937017245597288,0,0,0.189106080167819,0,0.43839146485515,0,0,0.411564272815887,0,0.702213187313235,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0.292399974850665,0,0.134206418760372,0,0,0.330418782983798,0,0,0,0.128867461322093,0,0,0,0.474529061544512,0,0.502670417600539,0.198956472041151,0,0,0.216138049874694,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0,0,0.739012760666419,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0,0.433947175744535,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41940085208269,0.178065603667255,0,0.659880491890142,0,0,0,0,0,0.614870295887855,0.258428293168221,0,0.356497378384721,0,0,0,0.340439605753788,0,0,0,0.177340233642274,0,0,0,0.23467170806371,0,0,0.16488625294148,0.161464426695906,0.0603129249281559,0,0,0,0.18542530201051,1.70870880797853,0.619160603889667,0.370389054739423,0,0.410082683163076,0.457556346413045,0.509935289981566,0.559805809294632,0.276399947608848,0,0,0,0,0.627264888043406,0.218362563746178,0.134864346384821,0,0,0,0.621339313086926,0,0.149516546043979,0.330916980914195,0,0.258319646955462,0,0,0,0,0,0,4.10814456816632,2.8381530140623,4.00572732942826,8.44485349355668,7.51912121803422,10.9274745129696,3.96644983415897,4.72606486958647,2.92802704849628,3.81034033274999,4.2346997757473,5.84747284438514,7.21588812302471,7.01261413089414,0,0,0,0,0,0.375364950902364,0.183151624267265,0.214368379079066,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0,0.206035057238894,0,0,0,0,0,0.128050304809739,0.114870937911227,0,0,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0.182927972872773,0.526139422875686,0,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0.429742108096597,0.191288332068843,0,0.231867835620421|short_description=p1@Pdcd1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18566 | |||
|HGNC= | |||
|MCL_coexpression_id=68 | |||
|TSSclassifier=NA | |||
|UniProt=Q02242,Q544F3 | |||
|association_with_transcript=-4bp_to_ENSMUST00000027507,NM_008798,uc007cev.1_5end | |||
|cluster_id=chr1:95949134..95949150,- | |||
|description=CAGE_peak_1_at_Pdcd1_5end | |||
|id=chr1:95949134..95949150,- | |||
|ontology_enrichment_celltype=CL:0000084!2.58e-11!11;CL:0000827!2.58e-11!11;CL:0000838!5.51e-10!12;CL:0000791!1.43e-09!9;CL:0000789!1.43e-09!9;CL:0002420!1.43e-09!9;CL:0002419!1.43e-09!9;CL:0000790!1.43e-09!9;CL:0000542!7.16e-09!13;CL:0000051!7.16e-09!13;CL:0000624!9.53e-09!8;CL:0000893!7.45e-07!6;CL:0002489!7.45e-07!6;CL:0000898!7.45e-07!6;CL:0000809!7.45e-07!6;CL:0000810!7.45e-07!6;CL:0000895!7.45e-07!6;CL:0000808!7.45e-07!6;CL:0000894!7.45e-07!6;CL:0000806!7.45e-07!6;CL:0000807!7.45e-07!6;CL:0000805!7.45e-07!6;CL:0002425!7.45e-07!6;CL:0002436!7.45e-07!6;CL:0002427!7.45e-07!6;CL:0002428!7.45e-07!6;CL:0002429!7.45e-07!6;CL:0002433!7.45e-07!6;CL:0002431!7.45e-07!6;CL:0002432!7.45e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,5.66e-32,11;CL:0000827,5.66e-32,11;CL:0000838,3.99e-29,12;CL:0000542,1.03e-26,13;CL:0000051,1.03e-26,13;CL:0000791,1.60e-26,9;CL:0000789,1.60e-26,9;CL:0002420,1.60e-26,9;CL:0002419,1.60e-26,9;CL:0000790,1.60e-26,9;CL:0000624,6.01e-24,8;CL:0000738,6.62e-20,17;CL:0002087,6.62e-20,17;CL:0000893,4.63e-18,6;CL:0002489,4.63e-18,6;CL:0000898,4.63e-18,6;CL:0000809,4.63e-18,6;CL:0000810,4.63e-18,6;CL:0000895,4.63e-18,6;CL:0000808,4.63e-18,6;CL:0000894,4.63e-18,6;CL:0000806,4.63e-18,6;CL:0000807,4.63e-18,6;CL:0000805,4.63e-18,6;CL:0002425,4.63e-18,6;CL:0002436,4.63e-18,6;CL:0002427,4.63e-18,6;CL:0002428,4.63e-18,6;CL:0002429,4.63e-18,6;CL:0002433,4.63e-18,6;CL:0002431,4.63e-18,6;CL:0002432,4.63e-18,6;CL:0002031,7.98e-13,25;CL:0000988,1.54e-09,32;CL:0002032,1.54e-09,32;CL:0000037,1.54e-09,32;CL:0000837,1.54e-09,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!2.87e-17!29;UBERON:0003408!6.22e-16!24;UBERON:0002370!2.92e-15!23;UBERON:0000974!2.92e-15!23;UBERON:0004807!2.92e-15!23;UBERON:0005058!2.92e-15!23;UBERON:0003351!2.92e-15!23;UBERON:0009113!2.92e-15!23;UBERON:0003295!2.92e-15!23;UBERON:0009722!2.92e-15!23;UBERON:0005562!2.92e-15!23;UBERON:0007690!2.92e-15!23;UBERON:0006562!2.98e-14!24;UBERON:0001557!2.98e-14!24;UBERON:0001042!2.98e-14!24;UBERON:0008814!2.98e-14!24;UBERON:0009145!2.98e-14!24;UBERON:0002193!3.30e-13!48;UBERON:0002390!1.75e-12!45;UBERON:0003061!1.75e-12!45;UBERON:0000072!1.05e-11!27;UBERON:0003081!1.46e-09!88;UBERON:0001004!4.73e-09!42;UBERON:0000065!1.61e-08!41;UBERON:0000063!4.97e-08!35;UBERON:0005057!1.60e-07!51;UBERON:0002405!4.30e-07!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.40e-48,23;UBERON:0000974,4.40e-48,23;UBERON:0004807,4.40e-48,23;UBERON:0005058,4.40e-48,23;UBERON:0003351,4.40e-48,23;UBERON:0009113,4.40e-48,23;UBERON:0003295,4.40e-48,23;UBERON:0009722,4.40e-48,23;UBERON:0005562,4.40e-48,23;UBERON:0007690,4.40e-48,23;UBERON:0006562,6.66e-46,24;UBERON:0003408,6.66e-46,24;UBERON:0001557,6.66e-46,24;UBERON:0001042,6.66e-46,24;UBERON:0008814,6.66e-46,24;UBERON:0009145,6.66e-46,24;UBERON:0004177,4.26e-41,29;UBERON:0005057,4.26e-41,29;UBERON:0000072,2.49e-40,27;UBERON:0000077,2.71e-33,35;UBERON:0007811,3.52e-29,36;UBERON:0002193,1.30e-25,48;UBERON:0002405,1.30e-25,48;UBERON:0000065,4.25e-25,41;UBERON:0002390,6.63e-25,45;UBERON:0003061,6.63e-25,45;UBERON:0001004,2.13e-24,42;UBERON:0000153,9.90e-24,43;UBERON:0003929,1.30e-17,55;UBERON:0002530,8.09e-16,65;UBERON:0002368,8.71e-16,60;UBERON:0000490,5.84e-14,66;UBERON:0003081,3.22e-13,87;UBERON:0005911,3.63e-13,69;UBERON:0000949,1.94e-12,72;UBERON:0001041,4.76e-12,80;UBERON:0000926,3.25e-09,120;UBERON:0004120,3.25e-09,120;UBERON:0006603,3.25e-09,120;UBERON:0004921,3.93e-07,114;UBERON:0001007,6.21e-07,116;UBERON:0001555,6.21e-07,116;UBERON:0007026,6.21e-07,116;UBERON:0001048,6.64e-07,134;UBERON:0004119,9.66e-07,118;UBERON:0000925,9.66e-07,118;UBERON:0006595,9.66e-07,118 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,13.1705789910408,19.5696323790817,17.0867104215055,44.0030178339548,26.9629897404237,1.88320802924326,1.22388563386596,0.333109761815663,0.607425802169478,0,0.630924330716475,0.959801035240171,0,0.595303031057488,3.47518329203099,17.7615856614476,0,0.45881856213434,0,0.430761996159075,0,0,0,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.7608642603403,4.03312558970957,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0.142371680799103,0,1.4387976733305,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.34255163915718,5.69663344023778,0.29688427812965,0,0,0,0,0,0,1.23597483867187,0.433798070759735,0,0,0.220841518460394,0,0,0.292780797011547,0,0,0.718890747035522,0,0.254140454146129,0.149790639404823,0,0,0,0,0,0,0.305518091550949,0.248813941220186,0,0,0,0.229902104433473,0,0,0,0,0.0937017245597288,0,0,0.189106080167819,0,0.43839146485515,0,0,0.411564272815887,0,0.702213187313235,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0.292399974850665,0,0.134206418760372,0,0,0.330418782983798,0,0,0,0.128867461322093,0,0,0,0.474529061544512,0,0.502670417600539,0.198956472041151,0,0,0.216138049874694,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0,0,0.739012760666419,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0,0.433947175744535,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41940085208269,0.178065603667255,0,0.659880491890142,0,0,0,0,0,0.614870295887855,0.258428293168221,0,0.356497378384721,0,0,0,0.340439605753788,0,0,0,0.177340233642274,0,0,0,0.23467170806371,0,0,0.16488625294148,0.161464426695906,0.0603129249281559,0,0,0,0.18542530201051,1.70870880797853,0.619160603889667,0.370389054739423,0,0.410082683163076,0.457556346413045,0.509935289981566,0.559805809294632,0.276399947608848,0,0,0,0,0.627264888043406,0.218362563746178,0.134864346384821,0,0,0,0.621339313086926,0,0.149516546043979,0.330916980914195,0,0.258319646955462,0,0,0,0,0,0,4.10814456816632,2.8381530140623,4.00572732942826,8.44485349355668,7.51912121803422,10.9274745129696,3.96644983415897,4.72606486958647,2.92802704849628,3.81034033274999,4.2346997757473,5.84747284438514,7.21588812302471,7.01261413089414,0,0,0,0,0,0.375364950902364,0.183151624267265,0.214368379079066,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0,0.206035057238894,0,0,0,0,0,0.128050304809739,0.114870937911227,0,0,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0.182927972872773,0.526139422875686,0,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0.429742108096597,0.191288332068843,0,0.231867835620421 | |||
|short_description=p1@Pdcd1 | |||
}} |
Latest revision as of 20:19, 1 October 2015
Short description: | p1@Pdcd1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pdcd1_5end |
Coexpression cluster: | MCL_coexpression_mm9:68 |
Association with transcript: | -4bp_to_ENSMUST00000027507, NM_008798, uc007cev.1_5end |
EntrezGene: | Pdcd1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data