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FFCP PHASE1:Mm9::chr1:95949134..95949150,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr1:95949134..95949150,-
|DHSsupport=NA
|short_description=p1@Pdcd1
|DPIdataset=NA
|description=CAGE_peak_1_at_Pdcd1_5end
|association_with_transcript=-4bp_to_ENSMUST00000027507,NM_008798,uc007cev.1_5end
|EntrezGene=18566
|EntrezGene=18566
|HGNC=
|HGNC=
|MCL_coexpression_id=68
|TSSclassifier=NA
|UniProt=Q02242,Q544F3
|UniProt=Q02242,Q544F3
|association_with_transcript=-4bp_to_ENSMUST00000027507,NM_008798,uc007cev.1_5end
|cluster_id=chr1:95949134..95949150,-
|description=CAGE_peak_1_at_Pdcd1_5end
|id=chr1:95949134..95949150,-
|ontology_enrichment_celltype=CL:0000084!2.58e-11!11;CL:0000827!2.58e-11!11;CL:0000838!5.51e-10!12;CL:0000791!1.43e-09!9;CL:0000789!1.43e-09!9;CL:0002420!1.43e-09!9;CL:0002419!1.43e-09!9;CL:0000790!1.43e-09!9;CL:0000542!7.16e-09!13;CL:0000051!7.16e-09!13;CL:0000624!9.53e-09!8;CL:0000893!7.45e-07!6;CL:0002489!7.45e-07!6;CL:0000898!7.45e-07!6;CL:0000809!7.45e-07!6;CL:0000810!7.45e-07!6;CL:0000895!7.45e-07!6;CL:0000808!7.45e-07!6;CL:0000894!7.45e-07!6;CL:0000806!7.45e-07!6;CL:0000807!7.45e-07!6;CL:0000805!7.45e-07!6;CL:0002425!7.45e-07!6;CL:0002436!7.45e-07!6;CL:0002427!7.45e-07!6;CL:0002428!7.45e-07!6;CL:0002429!7.45e-07!6;CL:0002433!7.45e-07!6;CL:0002431!7.45e-07!6;CL:0002432!7.45e-07!6
|ontology_enrichment_celltype_v019_2=CL:0000084,5.66e-32,11;CL:0000827,5.66e-32,11;CL:0000838,3.99e-29,12;CL:0000542,1.03e-26,13;CL:0000051,1.03e-26,13;CL:0000791,1.60e-26,9;CL:0000789,1.60e-26,9;CL:0002420,1.60e-26,9;CL:0002419,1.60e-26,9;CL:0000790,1.60e-26,9;CL:0000624,6.01e-24,8;CL:0000738,6.62e-20,17;CL:0002087,6.62e-20,17;CL:0000893,4.63e-18,6;CL:0002489,4.63e-18,6;CL:0000898,4.63e-18,6;CL:0000809,4.63e-18,6;CL:0000810,4.63e-18,6;CL:0000895,4.63e-18,6;CL:0000808,4.63e-18,6;CL:0000894,4.63e-18,6;CL:0000806,4.63e-18,6;CL:0000807,4.63e-18,6;CL:0000805,4.63e-18,6;CL:0002425,4.63e-18,6;CL:0002436,4.63e-18,6;CL:0002427,4.63e-18,6;CL:0002428,4.63e-18,6;CL:0002429,4.63e-18,6;CL:0002433,4.63e-18,6;CL:0002431,4.63e-18,6;CL:0002432,4.63e-18,6;CL:0002031,7.98e-13,25;CL:0000988,1.54e-09,32;CL:0002032,1.54e-09,32;CL:0000037,1.54e-09,32;CL:0000837,1.54e-09,32
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!2.87e-17!29;UBERON:0003408!6.22e-16!24;UBERON:0002370!2.92e-15!23;UBERON:0000974!2.92e-15!23;UBERON:0004807!2.92e-15!23;UBERON:0005058!2.92e-15!23;UBERON:0003351!2.92e-15!23;UBERON:0009113!2.92e-15!23;UBERON:0003295!2.92e-15!23;UBERON:0009722!2.92e-15!23;UBERON:0005562!2.92e-15!23;UBERON:0007690!2.92e-15!23;UBERON:0006562!2.98e-14!24;UBERON:0001557!2.98e-14!24;UBERON:0001042!2.98e-14!24;UBERON:0008814!2.98e-14!24;UBERON:0009145!2.98e-14!24;UBERON:0002193!3.30e-13!48;UBERON:0002390!1.75e-12!45;UBERON:0003061!1.75e-12!45;UBERON:0000072!1.05e-11!27;UBERON:0003081!1.46e-09!88;UBERON:0001004!4.73e-09!42;UBERON:0000065!1.61e-08!41;UBERON:0000063!4.97e-08!35;UBERON:0005057!1.60e-07!51;UBERON:0002405!4.30e-07!70
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.40e-48,23;UBERON:0000974,4.40e-48,23;UBERON:0004807,4.40e-48,23;UBERON:0005058,4.40e-48,23;UBERON:0003351,4.40e-48,23;UBERON:0009113,4.40e-48,23;UBERON:0003295,4.40e-48,23;UBERON:0009722,4.40e-48,23;UBERON:0005562,4.40e-48,23;UBERON:0007690,4.40e-48,23;UBERON:0006562,6.66e-46,24;UBERON:0003408,6.66e-46,24;UBERON:0001557,6.66e-46,24;UBERON:0001042,6.66e-46,24;UBERON:0008814,6.66e-46,24;UBERON:0009145,6.66e-46,24;UBERON:0004177,4.26e-41,29;UBERON:0005057,4.26e-41,29;UBERON:0000072,2.49e-40,27;UBERON:0000077,2.71e-33,35;UBERON:0007811,3.52e-29,36;UBERON:0002193,1.30e-25,48;UBERON:0002405,1.30e-25,48;UBERON:0000065,4.25e-25,41;UBERON:0002390,6.63e-25,45;UBERON:0003061,6.63e-25,45;UBERON:0001004,2.13e-24,42;UBERON:0000153,9.90e-24,43;UBERON:0003929,1.30e-17,55;UBERON:0002530,8.09e-16,65;UBERON:0002368,8.71e-16,60;UBERON:0000490,5.84e-14,66;UBERON:0003081,3.22e-13,87;UBERON:0005911,3.63e-13,69;UBERON:0000949,1.94e-12,72;UBERON:0001041,4.76e-12,80;UBERON:0000926,3.25e-09,120;UBERON:0004120,3.25e-09,120;UBERON:0006603,3.25e-09,120;UBERON:0004921,3.93e-07,114;UBERON:0001007,6.21e-07,116;UBERON:0001555,6.21e-07,116;UBERON:0007026,6.21e-07,116;UBERON:0001048,6.64e-07,134;UBERON:0004119,9.66e-07,118;UBERON:0000925,9.66e-07,118;UBERON:0006595,9.66e-07,118
|phase1_expression=0,0,0,0,0,0,0.233612640595526,13.1705789910408,19.5696323790817,17.0867104215055,44.0030178339548,26.9629897404237,1.88320802924326,1.22388563386596,0.333109761815663,0.607425802169478,0,0.630924330716475,0.959801035240171,0,0.595303031057488,3.47518329203099,17.7615856614476,0,0.45881856213434,0,0.430761996159075,0,0,0,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.7608642603403,4.03312558970957,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0.142371680799103,0,1.4387976733305,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.34255163915718,5.69663344023778,0.29688427812965,0,0,0,0,0,0,1.23597483867187,0.433798070759735,0,0,0.220841518460394,0,0,0.292780797011547,0,0,0.718890747035522,0,0.254140454146129,0.149790639404823,0,0,0,0,0,0,0.305518091550949,0.248813941220186,0,0,0,0.229902104433473,0,0,0,0,0.0937017245597288,0,0,0.189106080167819,0,0.43839146485515,0,0,0.411564272815887,0,0.702213187313235,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0.292399974850665,0,0.134206418760372,0,0,0.330418782983798,0,0,0,0.128867461322093,0,0,0,0.474529061544512,0,0.502670417600539,0.198956472041151,0,0,0.216138049874694,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0,0,0.739012760666419,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0,0.433947175744535,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41940085208269,0.178065603667255,0,0.659880491890142,0,0,0,0,0,0.614870295887855,0.258428293168221,0,0.356497378384721,0,0,0,0.340439605753788,0,0,0,0.177340233642274,0,0,0,0.23467170806371,0,0,0.16488625294148,0.161464426695906,0.0603129249281559,0,0,0,0.18542530201051,1.70870880797853,0.619160603889667,0.370389054739423,0,0.410082683163076,0.457556346413045,0.509935289981566,0.559805809294632,0.276399947608848,0,0,0,0,0.627264888043406,0.218362563746178,0.134864346384821,0,0,0,0.621339313086926,0,0.149516546043979,0.330916980914195,0,0.258319646955462,0,0,0,0,0,0,4.10814456816632,2.8381530140623,4.00572732942826,8.44485349355668,7.51912121803422,10.9274745129696,3.96644983415897,4.72606486958647,2.92802704849628,3.81034033274999,4.2346997757473,5.84747284438514,7.21588812302471,7.01261413089414,0,0,0,0,0,0.375364950902364,0.183151624267265,0.214368379079066,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0,0.206035057238894,0,0,0,0,0,0.128050304809739,0.114870937911227,0,0,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0.182927972872773,0.526139422875686,0,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0.429742108096597,0.191288332068843,0,0.231867835620421
|phase1_expression=0,0,0,0,0,0,0.233612640595526,13.1705789910408,19.5696323790817,17.0867104215055,44.0030178339548,26.9629897404237,1.88320802924326,1.22388563386596,0.333109761815663,0.607425802169478,0,0.630924330716475,0.959801035240171,0,0.595303031057488,3.47518329203099,17.7615856614476,0,0.45881856213434,0,0.430761996159075,0,0,0,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.7608642603403,4.03312558970957,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0.142371680799103,0,1.4387976733305,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.34255163915718,5.69663344023778,0.29688427812965,0,0,0,0,0,0,1.23597483867187,0.433798070759735,0,0,0.220841518460394,0,0,0.292780797011547,0,0,0.718890747035522,0,0.254140454146129,0.149790639404823,0,0,0,0,0,0,0.305518091550949,0.248813941220186,0,0,0,0.229902104433473,0,0,0,0,0.0937017245597288,0,0,0.189106080167819,0,0.43839146485515,0,0,0.411564272815887,0,0.702213187313235,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0.292399974850665,0,0.134206418760372,0,0,0.330418782983798,0,0,0,0.128867461322093,0,0,0,0.474529061544512,0,0.502670417600539,0.198956472041151,0,0,0.216138049874694,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0,0,0.739012760666419,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0,0.433947175744535,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41940085208269,0.178065603667255,0,0.659880491890142,0,0,0,0,0,0.614870295887855,0.258428293168221,0,0.356497378384721,0,0,0,0.340439605753788,0,0,0,0.177340233642274,0,0,0,0.23467170806371,0,0,0.16488625294148,0.161464426695906,0.0603129249281559,0,0,0,0.18542530201051,1.70870880797853,0.619160603889667,0.370389054739423,0,0.410082683163076,0.457556346413045,0.509935289981566,0.559805809294632,0.276399947608848,0,0,0,0,0.627264888043406,0.218362563746178,0.134864346384821,0,0,0,0.621339313086926,0,0.149516546043979,0.330916980914195,0,0.258319646955462,0,0,0,0,0,0,4.10814456816632,2.8381530140623,4.00572732942826,8.44485349355668,7.51912121803422,10.9274745129696,3.96644983415897,4.72606486958647,2.92802704849628,3.81034033274999,4.2346997757473,5.84747284438514,7.21588812302471,7.01261413089414,0,0,0,0,0,0.375364950902364,0.183151624267265,0.214368379079066,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0,0.206035057238894,0,0,0,0,0,0.128050304809739,0.114870937911227,0,0,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0.182927972872773,0.526139422875686,0,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0.429742108096597,0.191288332068843,0,0.231867835620421
|short_description=p1@Pdcd1
}}
}}

Latest revision as of 20:19, 1 October 2015

Short description:p1@Pdcd1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Pdcd1_5end
Coexpression cluster:MCL_coexpression_mm9:68
Association with transcript: -4bp_to_ENSMUST00000027507, NM_008798, uc007cev.1_5end
EntrezGene:Pdcd1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Pdcd1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E913.17
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E719.57
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F217.09
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E644.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F126.96
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.88
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.22
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.96
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.48
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I917.76
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I921.76
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.03
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D91.44
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H95.70
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I71.42
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G21.71
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B54.11
thymus, embryo E14.CNhs11041.402-44I42.84
thymus, embryo E15.CNhs11005.430-45I24.01
thymus, embryo E16.CNhs11002.456-26C58.44
thymus, embryo E17.CNhs10581.478-18C17.52
thymus, embryo E18.CNhs10595.1273-19G410.93
thymus, neonate N02.CNhs11181.1541-43F83.97
thymus, neonate N03.CNhs11137.2104-43C74.73
thymus, neonate N06.CNhs11197.681-26C42.93
thymus, neonate N07.CNhs11211.713-19D33.81
thymus, neonate N10.CNhs11194.748-24E44.23
thymus, neonate N20.CNhs11186.820-7A25.85
thymus, neonate N25.CNhs11125.1362-25G77.22
thymus, neonate N30.CNhs11132.1393-42G27.01
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
T cell5.66e-3211
pro-T cell5.66e-3211
lymphoid lineage restricted progenitor cell3.99e-2912
lymphocyte1.03e-2613
common lymphoid progenitor1.03e-2613
mature alpha-beta T cell1.60e-269
alpha-beta T cell1.60e-269
immature T cell1.60e-269
mature T cell1.60e-269
immature alpha-beta T cell1.60e-269
CD4-positive, alpha-beta T cell6.01e-248
leukocyte6.62e-2017
nongranular leukocyte6.62e-2017
thymocyte4.63e-186
double negative thymocyte4.63e-186
naive T cell4.63e-186
double-positive, alpha-beta thymocyte4.63e-186
CD4-positive, alpha-beta thymocyte4.63e-186
naive thymus-derived CD4-positive, alpha-beta T cell4.63e-186
DN4 thymocyte4.63e-186
DN1 thymic pro-T cell4.63e-186
DN2 thymocyte4.63e-186
DN3 thymocyte4.63e-186
immature single positive thymocyte4.63e-186
early T lineage precursor4.63e-186
mature CD4 single-positive thymocyte4.63e-186
resting double-positive thymocyte4.63e-186
double-positive blast4.63e-186
CD69-positive double-positive thymocyte4.63e-186
CD69-positive, CD4-positive single-positive thymocyte4.63e-186
CD4-positive, CD8-intermediate double-positive thymocyte4.63e-186
CD24-positive, CD4 single-positive thymocyte4.63e-186
hematopoietic lineage restricted progenitor cell7.98e-1325
hematopoietic cell1.54e-0932
hematopoietic oligopotent progenitor cell1.54e-0932
hematopoietic stem cell1.54e-0932
hematopoietic multipotent progenitor cell1.54e-0932

Uber anatomy
Ontology termp-valuen
thymus4.40e-4823
neck4.40e-4823
respiratory system epithelium4.40e-4823
hemolymphoid system gland4.40e-4823
pharyngeal epithelium4.40e-4823
thymic region4.40e-4823
pharyngeal gland4.40e-4823
entire pharyngeal arch endoderm4.40e-4823
thymus primordium4.40e-4823
early pharyngeal endoderm4.40e-4823
pharynx6.66e-4624
gland of gut6.66e-4624
upper respiratory tract6.66e-4624
chordate pharynx6.66e-4624
pharyngeal arch system6.66e-4624
pharyngeal region of foregut6.66e-4624
hemopoietic organ4.26e-4129
immune organ4.26e-4129
segment of respiratory tract2.49e-4027
mixed endoderm/mesoderm-derived structure2.71e-3335
craniocervical region3.52e-2936
hemolymphoid system1.30e-2548
immune system1.30e-2548
respiratory tract4.25e-2541
hematopoietic system6.63e-2545
blood island6.63e-2545
respiratory system2.13e-2442
anterior region of body9.90e-2443
gut epithelium1.30e-1755
gland8.09e-1665
endocrine gland8.71e-1660
unilaminar epithelium5.84e-1466
lateral plate mesoderm3.22e-1387
endo-epithelium3.63e-1369
endocrine system1.94e-1272
foregut4.76e-1280
mesoderm3.25e-09120
mesoderm-derived structure3.25e-09120
presumptive mesoderm3.25e-09120
subdivision of digestive tract3.93e-07114
digestive system6.21e-07116
digestive tract6.21e-07116
primitive gut6.21e-07116
primordium6.64e-07134
endoderm-derived structure9.66e-07118
endoderm9.66e-07118
presumptive endoderm9.66e-07118
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