FFCP PHASE1:Mm9::chrX:39855684..39855699,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20400 | |EntrezGene=20400 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=4 | |MCL_coexpression_id=4 | ||
|TSSclassifier=NA | |||
|UniProt=O88890 | |UniProt=O88890 | ||
|association_with_transcript=-39bp_to_ENSMUST00000005839_5end | |association_with_transcript=-39bp_to_ENSMUST00000005839_5end | ||
|cluster_id=chrX:39855684..39855699,+ | |||
|description=CAGE_peak_2_at_Sh2d1a_5end | |description=CAGE_peak_2_at_Sh2d1a_5end | ||
|id=chrX:39855684..39855699,+ | |id=chrX:39855684..39855699,+ | ||
|ontology_enrichment_celltype=CL:0000791!6.20e-14!9;CL:0000789!6.20e-14!9;CL:0002420!6.20e-14!9;CL:0002419!6.20e-14!9;CL:0000790!6.20e-14!9;CL:0000624!1.23e-12!8;CL:0000084!5.49e-11!11;CL:0000827!5.49e-11!11;CL:0000838!6.93e-10!12;CL:0000893!8.03e-10!6;CL:0002489!8.03e-10!6;CL:0000898!8.03e-10!6;CL:0000809!8.03e-10!6;CL:0000810!8.03e-10!6;CL:0000895!8.03e-10!6;CL:0000808!8.03e-10!6;CL:0000894!8.03e-10!6;CL:0000806!8.03e-10!6;CL:0000807!8.03e-10!6;CL:0000805!8.03e-10!6;CL:0002425!8.03e-10!6;CL:0002436!8.03e-10!6;CL:0002427!8.03e-10!6;CL:0002428!8.03e-10!6;CL:0002429!8.03e-10!6;CL:0002433!8.03e-10!6;CL:0002431!8.03e-10!6;CL:0002432!8.03e-10!6;CL:0000542!5.89e-09!13;CL:0000051!5.89e-09!13 | |ontology_enrichment_celltype=CL:0000791!6.20e-14!9;CL:0000789!6.20e-14!9;CL:0002420!6.20e-14!9;CL:0002419!6.20e-14!9;CL:0000790!6.20e-14!9;CL:0000624!1.23e-12!8;CL:0000084!5.49e-11!11;CL:0000827!5.49e-11!11;CL:0000838!6.93e-10!12;CL:0000893!8.03e-10!6;CL:0002489!8.03e-10!6;CL:0000898!8.03e-10!6;CL:0000809!8.03e-10!6;CL:0000810!8.03e-10!6;CL:0000895!8.03e-10!6;CL:0000808!8.03e-10!6;CL:0000894!8.03e-10!6;CL:0000806!8.03e-10!6;CL:0000807!8.03e-10!6;CL:0000805!8.03e-10!6;CL:0002425!8.03e-10!6;CL:0002436!8.03e-10!6;CL:0002427!8.03e-10!6;CL:0002428!8.03e-10!6;CL:0002429!8.03e-10!6;CL:0002433!8.03e-10!6;CL:0002431!8.03e-10!6;CL:0002432!8.03e-10!6;CL:0000542!5.89e-09!13;CL:0000051!5.89e-09!13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.04e-28,9;CL:0000789,1.04e-28,9;CL:0002420,1.04e-28,9;CL:0002419,1.04e-28,9;CL:0000790,1.04e-28,9;CL:0000624,7.53e-26,8;CL:0000084,3.03e-23,11;CL:0000827,3.03e-23,11;CL:0000838,3.40e-21,12;CL:0000893,1.15e-19,6;CL:0002489,1.15e-19,6;CL:0000898,1.15e-19,6;CL:0000809,1.15e-19,6;CL:0000810,1.15e-19,6;CL:0000895,1.15e-19,6;CL:0000808,1.15e-19,6;CL:0000894,1.15e-19,6;CL:0000806,1.15e-19,6;CL:0000807,1.15e-19,6;CL:0000805,1.15e-19,6;CL:0002425,1.15e-19,6;CL:0002436,1.15e-19,6;CL:0002427,1.15e-19,6;CL:0002428,1.15e-19,6;CL:0002429,1.15e-19,6;CL:0002433,1.15e-19,6;CL:0002431,1.15e-19,6;CL:0002432,1.15e-19,6;CL:0000542,1.85e-19,13;CL:0000051,1.85e-19,13;CL:0000738,1.49e-14,17;CL:0002087,1.49e-14,17;CL:0002031,1.89e-09,25;CL:0000988,4.44e-07,32;CL:0002032,4.44e-07,32;CL:0000037,4.44e-07,32;CL:0000837,4.44e-07,32 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!3.68e-28!29;UBERON:0002370!1.80e-26!23;UBERON:0000974!1.80e-26!23;UBERON:0004807!1.80e-26!23;UBERON:0005058!1.80e-26!23;UBERON:0003351!1.80e-26!23;UBERON:0009113!1.80e-26!23;UBERON:0003295!1.80e-26!23;UBERON:0009722!1.80e-26!23;UBERON:0005562!1.80e-26!23;UBERON:0007690!1.80e-26!23;UBERON:0006562!4.31e-25!24;UBERON:0003408!4.31e-25!24;UBERON:0001557!4.31e-25!24;UBERON:0001042!4.31e-25!24;UBERON:0008814!4.31e-25!24;UBERON:0009145!4.31e-25!24;UBERON:0000072!1.41e-21!27;UBERON:0002390!7.41e-20!45;UBERON:0003061!7.41e-20!45;UBERON:0002193!8.04e-20!48;UBERON:0000065!2.87e-19!41;UBERON:0001004!1.26e-18!42;UBERON:0000063!1.11e-16!35;UBERON:0005057!3.84e-14!51;UBERON:0002405!4.41e-12!70;UBERON:0003081!6.36e-12!88;UBERON:0005911!2.01e-09!69;UBERON:0003929!1.74e-08!55;UBERON:0001041!6.34e-08!92;UBERON:0002368!2.70e-07!60;UBERON:0000077!4.09e-07!97 | |ontology_enrichment_uberon=UBERON:0004177!3.68e-28!29;UBERON:0002370!1.80e-26!23;UBERON:0000974!1.80e-26!23;UBERON:0004807!1.80e-26!23;UBERON:0005058!1.80e-26!23;UBERON:0003351!1.80e-26!23;UBERON:0009113!1.80e-26!23;UBERON:0003295!1.80e-26!23;UBERON:0009722!1.80e-26!23;UBERON:0005562!1.80e-26!23;UBERON:0007690!1.80e-26!23;UBERON:0006562!4.31e-25!24;UBERON:0003408!4.31e-25!24;UBERON:0001557!4.31e-25!24;UBERON:0001042!4.31e-25!24;UBERON:0008814!4.31e-25!24;UBERON:0009145!4.31e-25!24;UBERON:0000072!1.41e-21!27;UBERON:0002390!7.41e-20!45;UBERON:0003061!7.41e-20!45;UBERON:0002193!8.04e-20!48;UBERON:0000065!2.87e-19!41;UBERON:0001004!1.26e-18!42;UBERON:0000063!1.11e-16!35;UBERON:0005057!3.84e-14!51;UBERON:0002405!4.41e-12!70;UBERON:0003081!6.36e-12!88;UBERON:0005911!2.01e-09!69;UBERON:0003929!1.74e-08!55;UBERON:0001041!6.34e-08!92;UBERON:0002368!2.70e-07!60;UBERON:0000077!4.09e-07!97 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.74e-58,23;UBERON:0000974,3.74e-58,23;UBERON:0004807,3.74e-58,23;UBERON:0005058,3.74e-58,23;UBERON:0003351,3.74e-58,23;UBERON:0009113,3.74e-58,23;UBERON:0003295,3.74e-58,23;UBERON:0009722,3.74e-58,23;UBERON:0005562,3.74e-58,23;UBERON:0007690,3.74e-58,23;UBERON:0006562,1.40e-55,24;UBERON:0003408,1.40e-55,24;UBERON:0001557,1.40e-55,24;UBERON:0001042,1.40e-55,24;UBERON:0008814,1.40e-55,24;UBERON:0009145,1.40e-55,24;UBERON:0000072,5.29e-49,27;UBERON:0004177,2.26e-45,29;UBERON:0005057,2.26e-45,29;UBERON:0000077,5.75e-37,35;UBERON:0007811,7.74e-36,36;UBERON:0000065,5.14e-31,41;UBERON:0001004,3.45e-30,42;UBERON:0000153,2.12e-29,43;UBERON:0002193,8.71e-29,48;UBERON:0002405,8.71e-29,48;UBERON:0002390,6.30e-28,45;UBERON:0003061,6.30e-28,45;UBERON:0003929,1.54e-24,55;UBERON:0002368,3.60e-22,60;UBERON:0002530,3.65e-20,65;UBERON:0000490,8.45e-20,66;UBERON:0005911,9.08e-19,69;UBERON:0000949,8.01e-18,72;UBERON:0001041,1.20e-15,80;UBERON:0003081,4.48e-14,87;UBERON:0004921,8.73e-10,114;UBERON:0001007,1.51e-09,116;UBERON:0001555,1.51e-09,116;UBERON:0007026,1.51e-09,116;UBERON:0004119,2.57e-09,118;UBERON:0000925,2.57e-09,118;UBERON:0006595,2.57e-09,118;UBERON:0000926,4.24e-09,120;UBERON:0004120,4.24e-09,120;UBERON:0006603,4.24e-09,120;UBERON:0001048,1.08e-08,134 | |||
|phase1_expression=0,0,0,0,0,0,0,4.39019299701359,2.956563165185,3.27690336850791,2.05461561870606,5.42450681168288,4.45121897821135,3.67165690159789,0,0,0,0.157731082679119,0.137114433605739,0.42438965179803,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.35217285206807,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.91347103775248,3.6251303710604,0,0,0,0,0,0,0,0,0,1.76922110389975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.162137619091711,0.292399974850665,0,0.134206418760372,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0.195133647857799,0.157635144106191,0,0,0.327726629431476,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0,0.170870880797853,0,0,0.188368457004691,0.136694227721025,0.686334519619568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.7050453390488,1.41907650703115,2.77319584345034,10.783428307157,19.1558564364205,23.8417625737518,19.231271923195,25.5502882012019,27.5638408358443,30.7113430819649,32.86933635461,27.2882066071307,47.5286497703228,52.1270983729798,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0,0,0,0,0.128050304809739,0.114870937911227,0,0,0.192909220463705,0,0.294397840268795,0,0,0.238436189947321,0,0.188218760830661,0.169229215783353,0.182927972872773,0.263069711437843,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,4.39019299701359,2.956563165185,3.27690336850791,2.05461561870606,5.42450681168288,4.45121897821135,3.67165690159789,0,0,0,0.157731082679119,0.137114433605739,0.42438965179803,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.35217285206807,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.91347103775248,3.6251303710604,0,0,0,0,0,0,0,0,0,1.76922110389975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.162137619091711,0.292399974850665,0,0.134206418760372,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0.195133647857799,0.157635144106191,0,0,0.327726629431476,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0,0.170870880797853,0,0,0.188368457004691,0.136694227721025,0.686334519619568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.7050453390488,1.41907650703115,2.77319584345034,10.783428307157,19.1558564364205,23.8417625737518,19.231271923195,25.5502882012019,27.5638408358443,30.7113430819649,32.86933635461,27.2882066071307,47.5286497703228,52.1270983729798,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0,0,0,0,0.128050304809739,0.114870937911227,0,0,0.192909220463705,0,0.294397840268795,0,0,0.238436189947321,0,0.188218760830661,0.169229215783353,0.182927972872773,0.263069711437843,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p2@Sh2d1a | |short_description=p2@Sh2d1a | ||
}} | }} |
Latest revision as of 20:49, 1 October 2015
Short description: | p2@Sh2d1a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sh2d1a_5end |
Coexpression cluster: | MCL_coexpression_mm9:4 |
Association with transcript: | -39bp_to_ENSMUST00000005839_5end |
EntrezGene: | Sh2d1a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data