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FFCP PHASE1:Mm9::chrX:45872422..45872458,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=19337
|EntrezGene=19337
|HGNC=
|HGNC=
|MCL_coexpression_id=87
|MCL_coexpression_id=87
|TSSclassifier=NA
|UniProt=P97950
|UniProt=P97950
|association_with_transcript=-3bp_to_ENSMUST00000033430_5end
|association_with_transcript=-3bp_to_ENSMUST00000033430_5end
|cluster_id=chrX:45872422..45872458,+
|description=CAGE_peak_3_at_Rab33a_5end
|description=CAGE_peak_3_at_Rab33a_5end
|id=chrX:45872422..45872458,+
|id=chrX:45872422..45872458,+
|ontology_enrichment_celltype=CL:0000117!3.75e-14!23;CL:0000337!3.75e-14!23;CL:0000540!2.96e-11!33;CL:0000047!2.96e-11!33;CL:0000031!2.96e-11!33;CL:0000404!2.96e-11!33;CL:0000221!5.73e-08!44;CL:0000133!5.73e-08!44;CL:0002319!5.81e-08!43;CL:0000393!6.37e-08!39;CL:0000211!6.37e-08!39
|ontology_enrichment_celltype=CL:0000117!3.75e-14!23;CL:0000337!3.75e-14!23;CL:0000540!2.96e-11!33;CL:0000047!2.96e-11!33;CL:0000031!2.96e-11!33;CL:0000404!2.96e-11!33;CL:0000221!5.73e-08!44;CL:0000133!5.73e-08!44;CL:0002319!5.81e-08!43;CL:0000393!6.37e-08!39;CL:0000211!6.37e-08!39
|ontology_enrichment_celltype_v019_2=CL:0000117,6.16e-18,23;CL:0000337,6.16e-18,23;CL:0000540,4.34e-12,33;CL:0000047,4.34e-12,33;CL:0000031,4.34e-12,33;CL:0000404,4.34e-12,33;CL:0000393,4.86e-09,39;CL:0000211,4.86e-09,39;CL:0002319,1.59e-07,43;CL:0000221,3.41e-07,44;CL:0000133,3.41e-07,44;CL:0002609,9.75e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!6.35e-22!71;UBERON:0003075!6.35e-22!71;UBERON:0007284!6.35e-22!71;UBERON:0004121!1.26e-17!102;UBERON:0000924!1.26e-17!102;UBERON:0006601!1.26e-17!102;UBERON:0001017!1.01e-16!73;UBERON:0005743!1.01e-16!73;UBERON:0000073!1.02e-16!75;UBERON:0001016!1.02e-16!75;UBERON:0001049!2.14e-15!52;UBERON:0005068!2.14e-15!52;UBERON:0006241!2.14e-15!52;UBERON:0007135!2.14e-15!52;UBERON:0002020!9.55e-15!34;UBERON:0000033!1.77e-14!63;UBERON:0003056!2.89e-14!49;UBERON:0000955!3.83e-13!50;UBERON:0006238!3.83e-13!50;UBERON:0002616!6.22e-13!49;UBERON:0003080!4.95e-12!40;UBERON:0002780!1.23e-11!39;UBERON:0001890!1.23e-11!39;UBERON:0006240!1.23e-11!39;UBERON:0002791!3.23e-11!29;UBERON:0003528!3.23e-11!29;UBERON:0001893!3.23e-11!29;UBERON:0000956!9.08e-08!21;UBERON:0001869!9.08e-08!21;UBERON:0000203!9.08e-08!21;UBERON:0000468!2.03e-07!333;UBERON:0000153!2.93e-07!94;UBERON:0007811!6.28e-07!86
|ontology_enrichment_uberon=UBERON:0002346!6.35e-22!71;UBERON:0003075!6.35e-22!71;UBERON:0007284!6.35e-22!71;UBERON:0004121!1.26e-17!102;UBERON:0000924!1.26e-17!102;UBERON:0006601!1.26e-17!102;UBERON:0001017!1.01e-16!73;UBERON:0005743!1.01e-16!73;UBERON:0000073!1.02e-16!75;UBERON:0001016!1.02e-16!75;UBERON:0001049!2.14e-15!52;UBERON:0005068!2.14e-15!52;UBERON:0006241!2.14e-15!52;UBERON:0007135!2.14e-15!52;UBERON:0002020!9.55e-15!34;UBERON:0000033!1.77e-14!63;UBERON:0003056!2.89e-14!49;UBERON:0000955!3.83e-13!50;UBERON:0006238!3.83e-13!50;UBERON:0002616!6.22e-13!49;UBERON:0003080!4.95e-12!40;UBERON:0002780!1.23e-11!39;UBERON:0001890!1.23e-11!39;UBERON:0006240!1.23e-11!39;UBERON:0002791!3.23e-11!29;UBERON:0003528!3.23e-11!29;UBERON:0001893!3.23e-11!29;UBERON:0000956!9.08e-08!21;UBERON:0001869!9.08e-08!21;UBERON:0000203!9.08e-08!21;UBERON:0000468!2.03e-07!333;UBERON:0000153!2.93e-07!94;UBERON:0007811!6.28e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.50e-21,34;UBERON:0000073,2.56e-19,54;UBERON:0002346,6.16e-19,64;UBERON:0003075,6.16e-19,64;UBERON:0007284,6.16e-19,64;UBERON:0010314,1.63e-18,92;UBERON:0001049,4.91e-18,52;UBERON:0005068,4.91e-18,52;UBERON:0006241,4.91e-18,52;UBERON:0007135,4.91e-18,52;UBERON:0003056,2.37e-17,49;UBERON:0003528,2.80e-16,29;UBERON:0002791,2.80e-16,29;UBERON:0001893,2.80e-16,29;UBERON:0001017,8.72e-16,73;UBERON:0010371,1.31e-15,73;UBERON:0003080,5.56e-15,40;UBERON:0001016,5.60e-15,75;UBERON:0002780,2.05e-14,39;UBERON:0001890,2.05e-14,39;UBERON:0006240,2.05e-14,39;UBERON:0002616,4.98e-14,46;UBERON:0004121,1.01e-13,95;UBERON:0000924,1.01e-13,95;UBERON:0006601,1.01e-13,95;UBERON:0000955,1.66e-13,47;UBERON:0006238,1.66e-13,47;UBERON:0000956,6.08e-12,21;UBERON:0001869,6.08e-12,21;UBERON:0000203,6.08e-12,21;UBERON:0002619,2.13e-09,17;UBERON:0002021,1.36e-08,10;UBERON:0000411,1.36e-08,10;UBERON:0001950,1.36e-08,10;UBERON:0001948,6.50e-07,5;UBERON:0002315,6.50e-07,5
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,0,0,0,0,0,0.286533439938757,0,6.67644320836673,9.52183762689659,3.80298842103708,0,0,0,0,0,0.299600110518405,0.768436610643109,1.97010263386108,2.8351247049655,2.52389953621658,11.9973413449598,10.1599528837742,5.02212276781312,3.45043695665651,6.43453150627015,2.20231761998777,1.40456071893706,0.921639199537461,6.72620067423989,7.95942499340964,5.73004707612436,0.558365998002762,1.12552522006336,1.5279824777681,5.00868595305235,5.55249555116501,9.50637173709033,0.37863096666592,0.453429360640713,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0.890652834388949,4.3371331691534,9.43842982767638,6.22661842591358,8.13902258984162,4.46837087115678,1.38233250462643,0,0.144599356919912,0,0.161766849947409,0,0,0,0.878342391034642,1.8850203613211,0,0,0,0,1.49790639404823,1.37250180845588,2.51308704225729,1.04294592115366,0.511430914660661,1.66230435647648,2.92034273521964,1.32391173005411,0.124406970610093,0,0.210441855886474,0.910843100738926,3.67843367093557,3.96136685571768,2.86339153887859,1.83698547708585,1.5373646434182,1.21812241927647,0,0.862271971731369,0.378212160335639,0.527853372491847,1.09597866213787,0.278047249225598,0.348252166522167,0.823128545631774,1.79130840136644,0,0,0,0.828503090142008,1.17263029990548,1.44049649168812,0.710234206755631,0.983821158737019,1.07986979021165,0.232533944750408,1.60964040839772,0.583826711835847,0.658239399653922,0.164167464079095,0,0,0,0,0,2.98423375899925,0,0,0.639864751605702,1.39342003116263,0.515469845288373,0.201683524623343,0,0.380451252225118,0,0,0.251335208800269,0,0,0,0,0,0.758671603812327,1.14248512609729,1.1270773567308,0.407302655690628,0.387904974335251,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0,0,0,0.196558995113203,0.224862112384854,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,1.13694847062291,0.651859905768103,0.339490171550376,0.234690248288502,0,0,0.195133647857799,0,0,0,0,0.172684981865896,0,0,0,0,0,0.80275294993896,2.46144541843627,0,0,0.94652465824877,0.390438744296638,0.215423397732799,0,0.445597348164788,0.566153061577665,0,0,1.18586333383957,0.963963949265421,2.12910127812403,2.31485284767432,0.488660878060728,0.164970122972535,0,1.21390318077491,2.11626489875326,1.13163047853539,2.65771703592696,1.22974059177571,0,0.727067458955011,0.712994756769443,0,0,0,0,0.540183282093931,0.388076051348264,1.28602221018955,0.532020700926821,0.178368817602071,1.48094118541909,0.304464949114599,0,0,0,0,0,0,0,0,0,0.927126510052548,0,0.619160603889667,0.185194527369712,0,0,0,0,0,0,0,1.89801596148681,0.813277868507395,0.432021363287205,0.418176592028937,0.436725127492355,0.134864346384821,0.247960367176008,0,0,0,0,1.04661582230785,1.48912641411388,1.75006069509643,2.71235629303235,1.35164900392623,1.40828686374905,0.13020438484395,0.419437377702843,0,0,0,1.01362607645082,1.1298205288131,0.25984164595559,0.358053391334963,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0.167884616364078,0.19318959403219,0,0.549454872801795,0,0,3.3885110557024,2.30162618253588,2.86447756719698,3.95262319390481,2.05524755931193,2.2661816921691,5.40018000185445,1.80128481289688,1.35942722695261,1.03552062350364,2.17953429926771,2.79317411380722,2.73173769206615,2.18796045361465,1.46729213839588,1.65459157605013,1.11123363900808,1.03017528619447,0.962757628775446,0.758091635291392,2.5347929989024,1.13175804831646,1.03005658216871,0.768301828858431,0.861532034334199,0.476293691283074,1.27472758539341,0.77163688185482,1.64834360321323,0.735994600671987,1.71434626192708,1.4198064492747,1.1921809497366,1.0174249164263,0.941093804153306,1.09998990259179,0.182927972872773,0.526139422875686,0.950628796921032,1.68342681497322,0.593175090620871,0.492522411877817,0.818462086339379,0.929621047115796,0.771626443924566,1.99848462350357,0.467863216890817,0.859484216193193,0.382576664137687,0.220591419119515,0.927471342481686
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,0,0,0,0,0,0.286533439938757,0,6.67644320836673,9.52183762689659,3.80298842103708,0,0,0,0,0,0.299600110518405,0.768436610643109,1.97010263386108,2.8351247049655,2.52389953621658,11.9973413449598,10.1599528837742,5.02212276781312,3.45043695665651,6.43453150627015,2.20231761998777,1.40456071893706,0.921639199537461,6.72620067423989,7.95942499340964,5.73004707612436,0.558365998002762,1.12552522006336,1.5279824777681,5.00868595305235,5.55249555116501,9.50637173709033,0.37863096666592,0.453429360640713,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0.890652834388949,4.3371331691534,9.43842982767638,6.22661842591358,8.13902258984162,4.46837087115678,1.38233250462643,0,0.144599356919912,0,0.161766849947409,0,0,0,0.878342391034642,1.8850203613211,0,0,0,0,1.49790639404823,1.37250180845588,2.51308704225729,1.04294592115366,0.511430914660661,1.66230435647648,2.92034273521964,1.32391173005411,0.124406970610093,0,0.210441855886474,0.910843100738926,3.67843367093557,3.96136685571768,2.86339153887859,1.83698547708585,1.5373646434182,1.21812241927647,0,0.862271971731369,0.378212160335639,0.527853372491847,1.09597866213787,0.278047249225598,0.348252166522167,0.823128545631774,1.79130840136644,0,0,0,0.828503090142008,1.17263029990548,1.44049649168812,0.710234206755631,0.983821158737019,1.07986979021165,0.232533944750408,1.60964040839772,0.583826711835847,0.658239399653922,0.164167464079095,0,0,0,0,0,2.98423375899925,0,0,0.639864751605702,1.39342003116263,0.515469845288373,0.201683524623343,0,0.380451252225118,0,0,0.251335208800269,0,0,0,0,0,0.758671603812327,1.14248512609729,1.1270773567308,0.407302655690628,0.387904974335251,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0,0,0,0.196558995113203,0.224862112384854,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,1.13694847062291,0.651859905768103,0.339490171550376,0.234690248288502,0,0,0.195133647857799,0,0,0,0,0.172684981865896,0,0,0,0,0,0.80275294993896,2.46144541843627,0,0,0.94652465824877,0.390438744296638,0.215423397732799,0,0.445597348164788,0.566153061577665,0,0,1.18586333383957,0.963963949265421,2.12910127812403,2.31485284767432,0.488660878060728,0.164970122972535,0,1.21390318077491,2.11626489875326,1.13163047853539,2.65771703592696,1.22974059177571,0,0.727067458955011,0.712994756769443,0,0,0,0,0.540183282093931,0.388076051348264,1.28602221018955,0.532020700926821,0.178368817602071,1.48094118541909,0.304464949114599,0,0,0,0,0,0,0,0,0,0.927126510052548,0,0.619160603889667,0.185194527369712,0,0,0,0,0,0,0,1.89801596148681,0.813277868507395,0.432021363287205,0.418176592028937,0.436725127492355,0.134864346384821,0.247960367176008,0,0,0,0,1.04661582230785,1.48912641411388,1.75006069509643,2.71235629303235,1.35164900392623,1.40828686374905,0.13020438484395,0.419437377702843,0,0,0,1.01362607645082,1.1298205288131,0.25984164595559,0.358053391334963,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0.167884616364078,0.19318959403219,0,0.549454872801795,0,0,3.3885110557024,2.30162618253588,2.86447756719698,3.95262319390481,2.05524755931193,2.2661816921691,5.40018000185445,1.80128481289688,1.35942722695261,1.03552062350364,2.17953429926771,2.79317411380722,2.73173769206615,2.18796045361465,1.46729213839588,1.65459157605013,1.11123363900808,1.03017528619447,0.962757628775446,0.758091635291392,2.5347929989024,1.13175804831646,1.03005658216871,0.768301828858431,0.861532034334199,0.476293691283074,1.27472758539341,0.77163688185482,1.64834360321323,0.735994600671987,1.71434626192708,1.4198064492747,1.1921809497366,1.0174249164263,0.941093804153306,1.09998990259179,0.182927972872773,0.526139422875686,0.950628796921032,1.68342681497322,0.593175090620871,0.492522411877817,0.818462086339379,0.929621047115796,0.771626443924566,1.99848462350357,0.467863216890817,0.859484216193193,0.382576664137687,0.220591419119515,0.927471342481686
|short_description=p3@Rab33a
|short_description=p3@Rab33a
}}
}}

Latest revision as of 21:10, 1 October 2015

Short description:p3@Rab33a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Rab33a_5end
Coexpression cluster:MCL_coexpression_mm9:87
Association with transcript: -3bp_to_ENSMUST00000033430_5end
EntrezGene:Rab33a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Rab33a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C36.68
Mouse Granule cells, donor2.CNhs12357.11731-123E39.52
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.97
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.84
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D510.16
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.02
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.45
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.40
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.73
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.96
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.73
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.01
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.55
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E19.51
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C54.34
adrenal gland, embryo E16.CNhs11004.1254-43D69.44
adrenal gland, embryo E17.CNhs11043.1263-45I16.23
adrenal gland, embryo E18.CNhs11026.1262-18F58.14
adrenal gland, neonate N00.CNhs11191.1311-23C14.47
adrenal gland, neonate N25.CNhs11223.1377-27I31.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.50
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F12.51
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B22.92
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.32
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E23.68
eyeball, embryo E15.CNhs10593.426-16C93.96
eyeball, embryo E17.CNhs11023.1261-18D42.86
eyeball, neonate N00.CNhs11207.633-15C61.84
eyeball, neonate N01.CNhs11140.1532-43E71.54
eyeball, neonate N02.CNhs11205.1551-44G81.22
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I61.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I91.44
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G12.98
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F81.14
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A32.46
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I72.13
ovary, embryo E18.CNhs11040.505-44H72.31
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G32.66
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.90
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C51.49
testis, embryo E16.CNhs11033.470-26G51.75
testis, embryo E17.CNhs11029.486-18I52.71
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B71.41
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I21.13
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.95
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I82.18
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H22.73
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gray matter1.50e-2134
regional part of nervous system2.56e-1954
neurectoderm6.16e-1964
neural plate6.16e-1964
presumptive neural plate6.16e-1964
structure with developmental contribution from neural crest1.63e-1892
neural tube4.91e-1852
neural rod4.91e-1852
future spinal cord4.91e-1852
neural keel4.91e-1852
pre-chordal neural plate2.37e-1749
brain grey matter2.80e-1629
regional part of telencephalon2.80e-1629
telencephalon2.80e-1629
central nervous system8.72e-1673
ecto-epithelium1.31e-1573
anterior neural tube5.56e-1540
nervous system5.60e-1575
regional part of forebrain2.05e-1439
forebrain2.05e-1439
future forebrain2.05e-1439
regional part of brain4.98e-1446
ectoderm-derived structure1.01e-1395
ectoderm1.01e-1395
presumptive ectoderm1.01e-1395
brain1.66e-1347
future brain1.66e-1347
cerebral cortex6.08e-1221
cerebral hemisphere6.08e-1221
pallium6.08e-1221
regional part of cerebral cortex2.13e-0917
occipital lobe1.36e-0810
visual cortex1.36e-0810
neocortex1.36e-0810
regional part of spinal cord6.50e-075
gray matter of spinal cord6.50e-075
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