FFCP PHASE1:Mm9::chr5:124637159..124637234,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19679 | |EntrezGene=19679 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=Q6ZPQ6 | |UniProt=Q6ZPQ6 | ||
|association_with_transcript=0bp_to_ENSMUST00000047820,ENSMUST00000161938,uc008zpb.2_5end | |association_with_transcript=0bp_to_ENSMUST00000047820,ENSMUST00000161938,uc008zpb.2_5end | ||
|cluster_id=chr5:124637159..124637234,- | |||
|description=CAGE_peak_2_at_Pitpnm2_5end | |description=CAGE_peak_2_at_Pitpnm2_5end | ||
|id=chr5:124637159..124637234,- | |id=chr5:124637159..124637234,- | ||
|ontology_enrichment_celltype=CL:0002319!1.99e-13!43;CL:0000221!1.43e-12!44;CL:0000133!1.43e-12!44;CL:0000117!1.80e-12!23;CL:0000337!1.80e-12!23;CL:0000540!3.99e-11!33;CL:0000047!3.99e-11!33;CL:0000031!3.99e-11!33;CL:0000404!3.99e-11!33;CL:0000055!2.12e-08!50;CL:0000393!9.10e-07!39;CL:0000211!9.10e-07!39 | |ontology_enrichment_celltype=CL:0002319!1.99e-13!43;CL:0000221!1.43e-12!44;CL:0000133!1.43e-12!44;CL:0000117!1.80e-12!23;CL:0000337!1.80e-12!23;CL:0000540!3.99e-11!33;CL:0000047!3.99e-11!33;CL:0000031!3.99e-11!33;CL:0000404!3.99e-11!33;CL:0000055!2.12e-08!50;CL:0000393!9.10e-07!39;CL:0000211!9.10e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,5.41e-14,43;CL:0000117,7.53e-14,23;CL:0000337,7.53e-14,23;CL:0000221,2.77e-13,44;CL:0000133,2.77e-13,44;CL:0000540,2.18e-11,33;CL:0000047,2.18e-11,33;CL:0000031,2.18e-11,33;CL:0000404,2.18e-11,33;CL:0000393,1.00e-07,39;CL:0000211,1.00e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.62e-32!73;UBERON:0005743!1.62e-32!73;UBERON:0000073!8.89e-31!75;UBERON:0001016!8.89e-31!75;UBERON:0001049!6.41e-27!52;UBERON:0005068!6.41e-27!52;UBERON:0006241!6.41e-27!52;UBERON:0007135!6.41e-27!52;UBERON:0000955!1.65e-26!50;UBERON:0006238!1.65e-26!50;UBERON:0004121!3.39e-26!102;UBERON:0000924!3.39e-26!102;UBERON:0006601!3.39e-26!102;UBERON:0002616!1.04e-25!49;UBERON:0000033!1.20e-25!63;UBERON:0002346!6.49e-25!71;UBERON:0003075!6.49e-25!71;UBERON:0007284!6.49e-25!71;UBERON:0007811!1.01e-20!86;UBERON:0003056!1.11e-20!49;UBERON:0003080!1.45e-20!40;UBERON:0002020!1.65e-20!34;UBERON:0002780!6.21e-20!39;UBERON:0001890!6.21e-20!39;UBERON:0006240!6.21e-20!39;UBERON:0000153!9.30e-20!94;UBERON:0002791!3.04e-18!29;UBERON:0003528!3.04e-18!29;UBERON:0001893!3.04e-18!29;UBERON:0000956!2.95e-14!21;UBERON:0001869!2.95e-14!21;UBERON:0000203!2.95e-14!21;UBERON:0002619!9.29e-12!17;UBERON:0002021!4.13e-08!10;UBERON:0000411!4.13e-08!10;UBERON:0001950!4.13e-08!10;UBERON:0003076!7.36e-07!12;UBERON:0003057!7.36e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.31e-34,73;UBERON:0001016,1.01e-32,75;UBERON:0000073,5.40e-31,54;UBERON:0001049,1.74e-29,52;UBERON:0005068,1.74e-29,52;UBERON:0006241,1.74e-29,52;UBERON:0007135,1.74e-29,52;UBERON:0002346,5.54e-29,64;UBERON:0003075,5.54e-29,64;UBERON:0007284,5.54e-29,64;UBERON:0004121,8.29e-29,95;UBERON:0000924,8.29e-29,95;UBERON:0006601,8.29e-29,95;UBERON:0000955,7.36e-27,47;UBERON:0006238,7.36e-27,47;UBERON:0002616,5.60e-26,46;UBERON:0010371,1.27e-25,73;UBERON:0002020,6.57e-23,34;UBERON:0003080,2.43e-22,40;UBERON:0002780,1.24e-21,39;UBERON:0001890,1.24e-21,39;UBERON:0006240,1.24e-21,39;UBERON:0003056,1.39e-21,49;UBERON:0003528,2.36e-20,29;UBERON:0002791,2.36e-20,29;UBERON:0001893,2.36e-20,29;UBERON:0010314,8.06e-19,92;UBERON:0000956,7.33e-16,21;UBERON:0001869,7.33e-16,21;UBERON:0000203,7.33e-16,21;UBERON:0002619,4.79e-13,17;UBERON:0002021,6.11e-09,10;UBERON:0000411,6.11e-09,10;UBERON:0001950,6.11e-09,10;UBERON:0003076,1.56e-07,12;UBERON:0003057,1.56e-07,12;UBERON:0000025,4.33e-07,114 | |||
|phase1_expression=3.20297694209588,0,0,0,0,0,0,1.80772652818207,0,0,0,0,0.513602189793617,0.874204024189974,0.333109761815663,0.202475267389826,0,0,0,0.42438965179803,10.4603246885816,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.04152209913235,14.171635164729,7.68901639570651,10.6936444490856,8.53917171914711,11.5002051491977,0,2.17608642603403,0,0,0,0,10.7227724255587,11.6378015439847,8.87363964908651,0,0.889294796111139,0,0,0,12.583204641773,45.3377600279434,27.788816098672,26.4611639130114,25.4493203235172,8.85518051651791,13.0312439161452,15.4338407010842,15.0477389498631,21.1420320920305,22.0231761998777,21.4514727983115,18.279177457493,9.75958529203434,7.593474419,7.29278718779464,7.53794097303729,21.9477417912355,20.933359945423,12.0797720044204,8.68467252874528,7.26957838718672,0,0.377857800533928,1.44932244350839,0,0,0,0,0,2.80888840263504,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0.258937883647172,2.22663208597237,0.173485326766136,0.608930956624282,0.922461989024234,0.60289056221049,1.52865319276416,0.628332956648377,0,5.63937491987655,0,3.39710384889559,0.662524555381181,2.42437626567611,0,18.1524094147159,15.9179497178226,0.766371165625774,0,0,0,22.6183865501282,71.3700940397057,20.6073137465098,72.1370928797947,74.6689135404565,25.7657175253855,46.0765187112432,1.12023300235348,1.99051152976149,2.52722758433675,4.20883711772948,0.520481771850815,0.919608417733892,2.16074555766419,2.86339153887859,3.12967896096108,3.45907044769094,2.99845518591132,7.24369438069244,0,0,0.703804496655795,0.876782929710299,5.00485048606076,5.57203466435466,13.5816210029243,0.199034266818493,0,0,0,0.414251545071004,0.234526059981096,0.36012412292203,1.18372367792605,0.590292695242212,1.23413690309903,0.465067889500816,2.14618721119695,1.40118410840603,0.658239399653922,1.31333971263276,1.70244500046297,1.16959989940266,2.63460138349261,1.8788898626452,119.654980732988,32.8265713489917,0,0.264450566663544,0.639864751605702,0.232236671860439,0.77320476793256,1.00841762311671,1.11189021922435,0.760902504450237,0.949058123089023,1.31759163779209,2.01068167040216,1.1937388322469,1.75467678407208,0.898819408654221,0.432276099749388,0.398282546508734,0,0.342745537829186,0,0.407302655690628,1.16371492300575,0.280543279561274,0.632365371242573,0.442830443938806,0.156998727841375,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0.358794827043824,0,1.84753190166605,0.568474235311454,0.162964976442026,0.509235257325564,0,1.17254380209271,0.714130922658041,0.390267295715598,0.472905432318573,0.664394068946325,0.797273843287435,1.96635977658886,1.03610989119537,0.578596234326046,0,0,0,0,11.7201930691088,14.5342491374332,0,2.27223834483936,1.89304931649754,1.17131623288992,5.38558494331997,0.955875191810208,0.445597348164788,0.283076530788832,2.42886421004937,3.50707029493574,1.97643888973262,83.5435422696698,1.98716119291576,0,0.81443479676788,3.29940245945071,0,0.485561272309963,0.302323556964751,0.188605079755898,0.885905678642318,0.922305443831782,1.29214146584111,1.09060118843252,1.42598951353889,1.58018378967908,0,0,9.87274856685985,0.900305470156551,1.4229455216103,2.7863814554107,2.12808280370728,3.74574516964348,4.44282355625727,6.39376393140658,0.23467170806371,0,0.661585194164886,2.30840754118072,2.58343082713449,1.08563264870681,1.55184047204077,0.820704498725306,1.45740418314925,16.3174265769249,0.683483523191411,1.03193433981611,0.370389054739423,0.565105371014073,0.136694227721025,0,0.339956859987711,0.279902904647316,0,0.954670618015114,0.316335993581135,2.23651413839534,0.86404272657441,1.46361807210128,1.31017538247707,1.75323650300267,3.80205896336545,1.04702376793612,0.518459893167171,0.621339313086926,0,0.299033092087958,0,0.388902376688095,0.258319646955462,0.168956125490778,0.821500670520278,0.911430693907651,1.36317147753424,0.724752362478018,0,4.4241556887945,0,1.23253148597793,3.89762468933385,3.93858730468459,2.78153896693771,3.60586348559907,5.61220203263393,2.62512769865184,4.72482201260999,4.63800451629466,2.82627854145282,3.07877893249054,3.15567635890236,5.44152920676507,0,0,0,2.31827512838629,0,0.36630324853453,0.643105137237198,0,75.1119950680698,67.667809766555,77.3408943143185,65.6479156552887,63.7126743386697,72.5178141494113,74.9274975257304,77.4552469545659,62.9867948488044,60.5779564749629,1.14166082342594,3.19219898720825,1.70733605754134,2.43106717068294,1.67690530102386,1.83843508450014,4.00044110042907,3.7086310303001,4.81378814387723,5.55933865880354,3.29523089857312,4.33840585187975,3.37109426891577,4.8018864303652,3.27382173046996,2.85776214769844,3.59241410429052,4.24400285020151,4.12085900803307,4.12156976376312,2.40008476669791,3.37204031702741,5.7224685587357,3.34296758254356,3.76437521661322,3.72304274723377,4.75612729469209,4.20911538300549,3.12349461845482,5.05028044491965,3.79632057997357,3.64466584789585,4.50154147486658,3.87342102964915,4.05103883060397,9.49280196164194,1.87145286756327,4.72716318906256,5.35607329792761,3.97064554415128,2.78241402744506 | |phase1_expression=3.20297694209588,0,0,0,0,0,0,1.80772652818207,0,0,0,0,0.513602189793617,0.874204024189974,0.333109761815663,0.202475267389826,0,0,0,0.42438965179803,10.4603246885816,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.04152209913235,14.171635164729,7.68901639570651,10.6936444490856,8.53917171914711,11.5002051491977,0,2.17608642603403,0,0,0,0,10.7227724255587,11.6378015439847,8.87363964908651,0,0.889294796111139,0,0,0,12.583204641773,45.3377600279434,27.788816098672,26.4611639130114,25.4493203235172,8.85518051651791,13.0312439161452,15.4338407010842,15.0477389498631,21.1420320920305,22.0231761998777,21.4514727983115,18.279177457493,9.75958529203434,7.593474419,7.29278718779464,7.53794097303729,21.9477417912355,20.933359945423,12.0797720044204,8.68467252874528,7.26957838718672,0,0.377857800533928,1.44932244350839,0,0,0,0,0,2.80888840263504,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0.258937883647172,2.22663208597237,0.173485326766136,0.608930956624282,0.922461989024234,0.60289056221049,1.52865319276416,0.628332956648377,0,5.63937491987655,0,3.39710384889559,0.662524555381181,2.42437626567611,0,18.1524094147159,15.9179497178226,0.766371165625774,0,0,0,22.6183865501282,71.3700940397057,20.6073137465098,72.1370928797947,74.6689135404565,25.7657175253855,46.0765187112432,1.12023300235348,1.99051152976149,2.52722758433675,4.20883711772948,0.520481771850815,0.919608417733892,2.16074555766419,2.86339153887859,3.12967896096108,3.45907044769094,2.99845518591132,7.24369438069244,0,0,0.703804496655795,0.876782929710299,5.00485048606076,5.57203466435466,13.5816210029243,0.199034266818493,0,0,0,0.414251545071004,0.234526059981096,0.36012412292203,1.18372367792605,0.590292695242212,1.23413690309903,0.465067889500816,2.14618721119695,1.40118410840603,0.658239399653922,1.31333971263276,1.70244500046297,1.16959989940266,2.63460138349261,1.8788898626452,119.654980732988,32.8265713489917,0,0.264450566663544,0.639864751605702,0.232236671860439,0.77320476793256,1.00841762311671,1.11189021922435,0.760902504450237,0.949058123089023,1.31759163779209,2.01068167040216,1.1937388322469,1.75467678407208,0.898819408654221,0.432276099749388,0.398282546508734,0,0.342745537829186,0,0.407302655690628,1.16371492300575,0.280543279561274,0.632365371242573,0.442830443938806,0.156998727841375,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0.358794827043824,0,1.84753190166605,0.568474235311454,0.162964976442026,0.509235257325564,0,1.17254380209271,0.714130922658041,0.390267295715598,0.472905432318573,0.664394068946325,0.797273843287435,1.96635977658886,1.03610989119537,0.578596234326046,0,0,0,0,11.7201930691088,14.5342491374332,0,2.27223834483936,1.89304931649754,1.17131623288992,5.38558494331997,0.955875191810208,0.445597348164788,0.283076530788832,2.42886421004937,3.50707029493574,1.97643888973262,83.5435422696698,1.98716119291576,0,0.81443479676788,3.29940245945071,0,0.485561272309963,0.302323556964751,0.188605079755898,0.885905678642318,0.922305443831782,1.29214146584111,1.09060118843252,1.42598951353889,1.58018378967908,0,0,9.87274856685985,0.900305470156551,1.4229455216103,2.7863814554107,2.12808280370728,3.74574516964348,4.44282355625727,6.39376393140658,0.23467170806371,0,0.661585194164886,2.30840754118072,2.58343082713449,1.08563264870681,1.55184047204077,0.820704498725306,1.45740418314925,16.3174265769249,0.683483523191411,1.03193433981611,0.370389054739423,0.565105371014073,0.136694227721025,0,0.339956859987711,0.279902904647316,0,0.954670618015114,0.316335993581135,2.23651413839534,0.86404272657441,1.46361807210128,1.31017538247707,1.75323650300267,3.80205896336545,1.04702376793612,0.518459893167171,0.621339313086926,0,0.299033092087958,0,0.388902376688095,0.258319646955462,0.168956125490778,0.821500670520278,0.911430693907651,1.36317147753424,0.724752362478018,0,4.4241556887945,0,1.23253148597793,3.89762468933385,3.93858730468459,2.78153896693771,3.60586348559907,5.61220203263393,2.62512769865184,4.72482201260999,4.63800451629466,2.82627854145282,3.07877893249054,3.15567635890236,5.44152920676507,0,0,0,2.31827512838629,0,0.36630324853453,0.643105137237198,0,75.1119950680698,67.667809766555,77.3408943143185,65.6479156552887,63.7126743386697,72.5178141494113,74.9274975257304,77.4552469545659,62.9867948488044,60.5779564749629,1.14166082342594,3.19219898720825,1.70733605754134,2.43106717068294,1.67690530102386,1.83843508450014,4.00044110042907,3.7086310303001,4.81378814387723,5.55933865880354,3.29523089857312,4.33840585187975,3.37109426891577,4.8018864303652,3.27382173046996,2.85776214769844,3.59241410429052,4.24400285020151,4.12085900803307,4.12156976376312,2.40008476669791,3.37204031702741,5.7224685587357,3.34296758254356,3.76437521661322,3.72304274723377,4.75612729469209,4.20911538300549,3.12349461845482,5.05028044491965,3.79632057997357,3.64466584789585,4.50154147486658,3.87342102964915,4.05103883060397,9.49280196164194,1.87145286756327,4.72716318906256,5.35607329792761,3.97064554415128,2.78241402744506 | ||
|short_description=p2@Pitpnm2 | |short_description=p2@Pitpnm2 | ||
}} | }} |
Latest revision as of 21:31, 1 October 2015
Short description: | p2@Pitpnm2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Pitpnm2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 0bp_to_ENSMUST00000047820, ENSMUST00000161938, uc008zpb.2_5end |
EntrezGene: | Pitpnm2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 5.41e-14 | 43 |
CNS neuron (sensu Vertebrata) | 7.53e-14 | 23 |
neuroblast (sensu Vertebrata) | 7.53e-14 | 23 |
ectodermal cell | 2.77e-13 | 44 |
neurectodermal cell | 2.77e-13 | 44 |
neuron | 2.18e-11 | 33 |
neuronal stem cell | 2.18e-11 | 33 |
neuroblast | 2.18e-11 | 33 |
electrically signaling cell | 2.18e-11 | 33 |
electrically responsive cell | 1.00e-07 | 39 |
electrically active cell | 1.00e-07 | 39 |