FFCP PHASE1:Mm9::chr6:90686772..90686811,-: Difference between revisions
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{{FFCP|EntrezGene=232227|HGNC=|MCL_coexpression_id=602|UniProt=|association_with_transcript=-91bp_to_ENSMUST00000133492_5end|description=CAGE_peak_2_at_Iqsec1_5end|id=chr6:90686772..90686811,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000025!3.68e-18!114;UBERON:0004111!2.40e-17!122;UBERON:0000468!9.74e-10!333;UBERON:0000033!2.03e-09!63;UBERON:0001049!3.88e-09!52;UBERON:0005068!3.88e-09!52;UBERON:0006241!3.88e-09!52;UBERON:0007135!3.88e-09!52;UBERON:0003103!7.29e-09!43;UBERON:0004535!9.71e-09!23;UBERON:0001009!9.71e-09!23;UBERON:0000955!1.69e-08!50;UBERON:0006238!1.69e-08!50;UBERON:0004121!1.95e-08!102;UBERON:0000924!1.95e-08!102;UBERON:0006601!1.95e-08!102;UBERON:0002346!2.50e-08!71;UBERON:0003075!2.50e-08!71;UBERON:0007284!2.50e-08!71;UBERON:0002616!4.22e-08!49;UBERON:0001017!7.34e-08!73;UBERON:0005743!7.34e-08!73;UBERON:0000922!9.61e-08!328;UBERON:0003076!1.34e-07!12;UBERON:0003057!1.34e-07!12;UBERON:0007100!3.33e-07!18;UBERON:0000948!3.33e-07!18;UBERON:0005498!3.33e-07!18;UBERON:0004140!3.33e-07!18;UBERON:0009881!3.33e-07!18;UBERON:0004141!3.33e-07!18;UBERON:0003084!3.33e-07!18;UBERON:0007005!3.33e-07!18;UBERON:0004139!3.33e-07!18;UBERON:0004291!3.33e-07!18;UBERON:0000073!4.03e-07!75;UBERON:0001016!4.03e-07!75|ontology_enrichment_uberon_v019_2=UBERON:0000025,3.31e-18,114;UBERON:0004111,2.17e-17,122;UBERON:0010314,7.55e-14,92;UBERON:0000073,3.39e-10,54;UBERON:0001049,3.70e-09,52;UBERON:0005068,3.70e-09,52;UBERON:0006241,3.70e-09,52;UBERON:0007135,3.70e-09,52;UBERON:0003103,6.96e-09,43;UBERON:0002346,8.77e-09,64;UBERON:0003075,8.77e-09,64;UBERON:0007284,8.77e-09,64;UBERON:0004535,9.28e-09,23;UBERON:0001009,9.28e-09,23;UBERON:0004121,1.78e-08,95;UBERON:0000924,1.78e-08,95;UBERON:0006601,1.78e-08,95;UBERON:0010371,5.52e-08,73;UBERON:0003076,1.29e-07,12;UBERON:0003057,1.29e-07,12;UBERON:0001017,1.53e-07,73;UBERON:0007100,3.21e-07,18;UBERON:0000948,3.21e-07,18;UBERON:0005498,3.21e-07,18;UBERON:0004140,3.21e-07,18;UBERON:0009881,3.21e-07,18;UBERON:0004141,3.21e-07,18;UBERON:0003084,3.21e-07,18;UBERON:0007005,3.21e-07,18;UBERON:0004139,3.21e-07,18;UBERON:0004291,3.21e-07,18;UBERON:0000922,3.73e-07,320;UBERON:0000955,4.84e-07,47;UBERON:0006238,4.84e-07,47;UBERON:0001016,7.99e-07,75|phase1_expression=3.68342348341026,0.348975407639361,0,0,0,2.18243053485457,1.63528848416868,0.129123323441576,1.40788722151667,0.936258105287974,1.19852577757853,1.7549874978974,1.19840510951844,1.48614684112296,0.666219523631325,0,0,0,0.548457734422955,0.42438965179803,12.0761472014519,0,0,0,0,0,0,0.430942465371778,0.380046838912748,0.252030129759931,0.221730510655305,0,1.23012957516914,0,0.288851619751275,0.664938581433969,1.22501613757421,0,0,0,0,0,0,21.7801495097749,21.7960402121956,7.70896359079063,11.7358701652206,28.5612954858385,32.5135550447018,39.4692695120795,25.0575694709399,12.9377307928474,0,0.725362142011344,0.336093799142464,5.65970759279083,4.87106847895886,11.3447860301037,11.3297218081375,11.6378015439847,10.775133859605,6.77689064138264,8.89294796111139,8.99899717281399,9.88866362566974,10.6572017241915,13.1824048628098,11.5265491596466,4.87341177849845,4.59020190327748,3.36519938162211,23.7090317055157,22.7494597180162,4.16468717330844,6.3258010872036,3.67687514644008,34.1359231098105,57.4593021383345,63.4394982348286,10.9465618816061,12.8082701043374,10.939180781692,55.8365998002762,16.8828783009504,33.1572197675678,17.6777151284201,22.9218406086556,17.335148461753,1.28734528666413,2.04043212288321,8.98579914975201,9.46466264679525,4.75979933595425,12.9528765993076,12.3457519315057,9.85659151614138,11.2355536105401,2.04516387093669,1.29893002301434,1.41335829804136,4.22530259330042,5.13305909657271,2.54805239706646,0,2.59789249213457,1.01343946190039,1.51657333504435,13.4736978068491,1.8125651855302,9.94562331734326,3.29622120855658,4.87144765299426,4.15107895060905,4.6724018571313,7.64326596382081,11.0586600370114,23.2363269670311,52.7787652757678,2.65383165584962,9.70601099684455,3.75430581382669,2.42437626567611,14.9113408974498,27.2286141220739,20.3163305609051,1.53274233125155,0.11981512450592,0,0.127070227073065,56.620861695023,26.992535566299,16.3350657746724,11.9938780932671,10.4843337505436,57.141712253879,29.8523924044674,6.92507674182151,4.60305791257344,6.06534620240819,54.9253243863697,7.41686524887411,7.58676944630461,6.12211241338187,9.79581315932148,10.9538763633638,10.6334387836425,7.12133106653939,25.8703370739016,4.095791865724,6.24050064553804,8.79755620819744,6.79506770525482,6.11703948296315,5.57203466435466,5.76189981942242,5.57295947091781,0,0,0,9.73491130916859,13.1334593589414,11.1638478105829,15.6251525486239,21.0537727969722,20.9803273526834,20.6955210827863,26.8273401399619,19.1495161482158,24.1902979372816,19.8642631535705,29.1847714365081,29.3861974724918,36.2257690230234,35.9673202277796,12.4071069652835,13.377599609307,0.991256348951394,1.05780226665418,5.97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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=232227 | |||
|HGNC= | |||
|MCL_coexpression_id=602 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-91bp_to_ENSMUST00000133492_5end | |||
|cluster_id=chr6:90686772..90686811,- | |||
|description=CAGE_peak_2_at_Iqsec1_5end | |||
|id=chr6:90686772..90686811,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!3.68e-18!114;UBERON:0004111!2.40e-17!122;UBERON:0000468!9.74e-10!333;UBERON:0000033!2.03e-09!63;UBERON:0001049!3.88e-09!52;UBERON:0005068!3.88e-09!52;UBERON:0006241!3.88e-09!52;UBERON:0007135!3.88e-09!52;UBERON:0003103!7.29e-09!43;UBERON:0004535!9.71e-09!23;UBERON:0001009!9.71e-09!23;UBERON:0000955!1.69e-08!50;UBERON:0006238!1.69e-08!50;UBERON:0004121!1.95e-08!102;UBERON:0000924!1.95e-08!102;UBERON:0006601!1.95e-08!102;UBERON:0002346!2.50e-08!71;UBERON:0003075!2.50e-08!71;UBERON:0007284!2.50e-08!71;UBERON:0002616!4.22e-08!49;UBERON:0001017!7.34e-08!73;UBERON:0005743!7.34e-08!73;UBERON:0000922!9.61e-08!328;UBERON:0003076!1.34e-07!12;UBERON:0003057!1.34e-07!12;UBERON:0007100!3.33e-07!18;UBERON:0000948!3.33e-07!18;UBERON:0005498!3.33e-07!18;UBERON:0004140!3.33e-07!18;UBERON:0009881!3.33e-07!18;UBERON:0004141!3.33e-07!18;UBERON:0003084!3.33e-07!18;UBERON:0007005!3.33e-07!18;UBERON:0004139!3.33e-07!18;UBERON:0004291!3.33e-07!18;UBERON:0000073!4.03e-07!75;UBERON:0001016!4.03e-07!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000025,3.31e-18,114;UBERON:0004111,2.17e-17,122;UBERON:0010314,7.55e-14,92;UBERON:0000073,3.39e-10,54;UBERON:0001049,3.70e-09,52;UBERON:0005068,3.70e-09,52;UBERON:0006241,3.70e-09,52;UBERON:0007135,3.70e-09,52;UBERON:0003103,6.96e-09,43;UBERON:0002346,8.77e-09,64;UBERON:0003075,8.77e-09,64;UBERON:0007284,8.77e-09,64;UBERON:0004535,9.28e-09,23;UBERON:0001009,9.28e-09,23;UBERON:0004121,1.78e-08,95;UBERON:0000924,1.78e-08,95;UBERON:0006601,1.78e-08,95;UBERON:0010371,5.52e-08,73;UBERON:0003076,1.29e-07,12;UBERON:0003057,1.29e-07,12;UBERON:0001017,1.53e-07,73;UBERON:0007100,3.21e-07,18;UBERON:0000948,3.21e-07,18;UBERON:0005498,3.21e-07,18;UBERON:0004140,3.21e-07,18;UBERON:0009881,3.21e-07,18;UBERON:0004141,3.21e-07,18;UBERON:0003084,3.21e-07,18;UBERON:0007005,3.21e-07,18;UBERON:0004139,3.21e-07,18;UBERON:0004291,3.21e-07,18;UBERON:0000922,3.73e-07,320;UBERON:0000955,4.84e-07,47;UBERON:0006238,4.84e-07,47;UBERON:0001016,7.99e-07,75 | |||
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| |||
|short_description=p2@Iqsec1 | |||
}} |
Latest revision as of 22:02, 1 October 2015
Short description: | p2@Iqsec1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Iqsec1_5end |
Coexpression cluster: | MCL_coexpression_mm9:602 |
Association with transcript: | -91bp_to_ENSMUST00000133492_5end |
EntrezGene: | Iqsec1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tube | 3.31e-18 | 114 |
anatomical conduit | 2.17e-17 | 122 |
structure with developmental contribution from neural crest | 7.55e-14 | 92 |
regional part of nervous system | 3.39e-10 | 54 |
neural tube | 3.70e-09 | 52 |
neural rod | 3.70e-09 | 52 |
future spinal cord | 3.70e-09 | 52 |
neural keel | 3.70e-09 | 52 |
compound organ | 6.96e-09 | 43 |
neurectoderm | 8.77e-09 | 64 |
neural plate | 8.77e-09 | 64 |
presumptive neural plate | 8.77e-09 | 64 |
cardiovascular system | 9.28e-09 | 23 |
circulatory system | 9.28e-09 | 23 |
ectoderm-derived structure | 1.78e-08 | 95 |
ectoderm | 1.78e-08 | 95 |
presumptive ectoderm | 1.78e-08 | 95 |
ecto-epithelium | 5.52e-08 | 73 |
posterior neural tube | 1.29e-07 | 12 |
chordal neural plate | 1.29e-07 | 12 |
central nervous system | 1.53e-07 | 73 |
primary circulatory organ | 3.21e-07 | 18 |
heart | 3.21e-07 | 18 |
primitive heart tube | 3.21e-07 | 18 |
primary heart field | 3.21e-07 | 18 |
anterior lateral plate mesoderm | 3.21e-07 | 18 |
heart tube | 3.21e-07 | 18 |
heart primordium | 3.21e-07 | 18 |
cardiac mesoderm | 3.21e-07 | 18 |
cardiogenic plate | 3.21e-07 | 18 |
heart rudiment | 3.21e-07 | 18 |
embryo | 3.73e-07 | 320 |
brain | 4.84e-07 | 47 |
future brain | 4.84e-07 | 47 |
nervous system | 7.99e-07 | 75 |