FFCP PHASE1:Mm9::chrX:54465287..54465318,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=21947 | |EntrezGene=21947 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt=P27548,Q0VEI3 | |UniProt=P27548,Q0VEI3 | ||
|association_with_transcript=-1bp_to_ENSMUST00000033466,NM_011616,uc009thb.1_5end | |association_with_transcript=-1bp_to_ENSMUST00000033466,NM_011616,uc009thb.1_5end | ||
|cluster_id=chrX:54465287..54465318,+ | |||
|description=CAGE_peak_2_at_Cd40lg_5end | |description=CAGE_peak_2_at_Cd40lg_5end | ||
|id=chrX:54465287..54465318,+ | |id=chrX:54465287..54465318,+ | ||
|ontology_enrichment_celltype=CL:0000791!2.61e-15!9;CL:0000789!2.61e-15!9;CL:0002420!2.61e-15!9;CL:0002419!2.61e-15!9;CL:0000790!2.61e-15!9;CL:0000624!3.64e-14!8;CL:0000838!4.04e-13!12;CL:0000084!4.44e-12!11;CL:0000827!4.44e-12!11;CL:0000542!6.72e-12!13;CL:0000051!6.72e-12!13;CL:0000893!3.77e-11!6;CL:0002489!3.77e-11!6;CL:0000898!3.77e-11!6;CL:0000809!3.77e-11!6;CL:0000810!3.77e-11!6;CL:0000895!3.77e-11!6;CL:0000808!3.77e-11!6;CL:0000894!3.77e-11!6;CL:0000806!3.77e-11!6;CL:0000807!3.77e-11!6;CL:0000805!3.77e-11!6;CL:0002425!3.77e-11!6;CL:0002436!3.77e-11!6;CL:0002427!3.77e-11!6;CL:0002428!3.77e-11!6;CL:0002429!3.77e-11!6;CL:0002433!3.77e-11!6;CL:0002431!3.77e-11!6;CL:0002432!3.77e-11!6;CL:0002031!4.62e-10!25;CL:0000738!1.80e-08!17;CL:0002087!1.80e-08!17;CL:0000988!4.93e-07!32;CL:0002032!4.93e-07!32;CL:0000037!4.93e-07!32;CL:0000566!4.93e-07!32;CL:0000837!4.93e-07!32 | |ontology_enrichment_celltype=CL:0000791!2.61e-15!9;CL:0000789!2.61e-15!9;CL:0002420!2.61e-15!9;CL:0002419!2.61e-15!9;CL:0000790!2.61e-15!9;CL:0000624!3.64e-14!8;CL:0000838!4.04e-13!12;CL:0000084!4.44e-12!11;CL:0000827!4.44e-12!11;CL:0000542!6.72e-12!13;CL:0000051!6.72e-12!13;CL:0000893!3.77e-11!6;CL:0002489!3.77e-11!6;CL:0000898!3.77e-11!6;CL:0000809!3.77e-11!6;CL:0000810!3.77e-11!6;CL:0000895!3.77e-11!6;CL:0000808!3.77e-11!6;CL:0000894!3.77e-11!6;CL:0000806!3.77e-11!6;CL:0000807!3.77e-11!6;CL:0000805!3.77e-11!6;CL:0002425!3.77e-11!6;CL:0002436!3.77e-11!6;CL:0002427!3.77e-11!6;CL:0002428!3.77e-11!6;CL:0002429!3.77e-11!6;CL:0002433!3.77e-11!6;CL:0002431!3.77e-11!6;CL:0002432!3.77e-11!6;CL:0002031!4.62e-10!25;CL:0000738!1.80e-08!17;CL:0002087!1.80e-08!17;CL:0000988!4.93e-07!32;CL:0002032!4.93e-07!32;CL:0000037!4.93e-07!32;CL:0000566!4.93e-07!32;CL:0000837!4.93e-07!32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000624,3.11e-30,8;CL:0000791,9.57e-27,9;CL:0000789,9.57e-27,9;CL:0002420,9.57e-27,9;CL:0002419,9.57e-27,9;CL:0000790,9.57e-27,9;CL:0000893,2.37e-23,6;CL:0002489,2.37e-23,6;CL:0000898,2.37e-23,6;CL:0000809,2.37e-23,6;CL:0000810,2.37e-23,6;CL:0000895,2.37e-23,6;CL:0000808,2.37e-23,6;CL:0000894,2.37e-23,6;CL:0000806,2.37e-23,6;CL:0000807,2.37e-23,6;CL:0000805,2.37e-23,6;CL:0002425,2.37e-23,6;CL:0002436,2.37e-23,6;CL:0002427,2.37e-23,6;CL:0002428,2.37e-23,6;CL:0002429,2.37e-23,6;CL:0002433,2.37e-23,6;CL:0002431,2.37e-23,6;CL:0002432,2.37e-23,6;CL:0000084,1.15e-21,11;CL:0000827,1.15e-21,11;CL:0000838,9.22e-20,12;CL:0000542,3.78e-18,13;CL:0000051,3.78e-18,13;CL:0000738,1.37e-13,17;CL:0002087,1.37e-13,17;CL:0002031,1.56e-13,25;CL:0000988,3.46e-10,32;CL:0002032,3.46e-10,32;CL:0000037,3.46e-10,32;CL:0000837,3.46e-10,32 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!9.00e-21!29;UBERON:0003408!4.63e-19!24;UBERON:0002193!3.20e-18!48;UBERON:0002370!6.44e-18!23;UBERON:0000974!6.44e-18!23;UBERON:0004807!6.44e-18!23;UBERON:0005058!6.44e-18!23;UBERON:0003351!6.44e-18!23;UBERON:0009113!6.44e-18!23;UBERON:0003295!6.44e-18!23;UBERON:0009722!6.44e-18!23;UBERON:0005562!6.44e-18!23;UBERON:0007690!6.44e-18!23;UBERON:0001004!1.23e-17!42;UBERON:0006562!5.99e-17!24;UBERON:0001557!5.99e-17!24;UBERON:0001042!5.99e-17!24;UBERON:0008814!5.99e-17!24;UBERON:0009145!5.99e-17!24;UBERON:0002390!9.41e-17!45;UBERON:0003061!9.41e-17!45;UBERON:0000065!1.26e-16!41;UBERON:0000072!1.75e-14!27;UBERON:0000063!6.16e-13!35;UBERON:0002405!5.02e-11!70;UBERON:0005057!3.37e-10!51;UBERON:0001041!6.04e-10!92;UBERON:0001007!9.24e-10!128;UBERON:0001555!9.24e-10!128;UBERON:0007026!9.24e-10!128;UBERON:0000077!1.02e-09!97;UBERON:0004119!1.90e-09!130;UBERON:0000925!1.90e-09!130;UBERON:0006595!1.90e-09!130;UBERON:0004921!2.09e-09!126;UBERON:0004185!2.09e-09!126;UBERON:0003081!2.68e-09!88;UBERON:0005911!8.88e-09!69;UBERON:0002530!2.93e-07!65;UBERON:0003104!4.69e-07!131;UBERON:0009142!4.69e-07!131 | |ontology_enrichment_uberon=UBERON:0004177!9.00e-21!29;UBERON:0003408!4.63e-19!24;UBERON:0002193!3.20e-18!48;UBERON:0002370!6.44e-18!23;UBERON:0000974!6.44e-18!23;UBERON:0004807!6.44e-18!23;UBERON:0005058!6.44e-18!23;UBERON:0003351!6.44e-18!23;UBERON:0009113!6.44e-18!23;UBERON:0003295!6.44e-18!23;UBERON:0009722!6.44e-18!23;UBERON:0005562!6.44e-18!23;UBERON:0007690!6.44e-18!23;UBERON:0001004!1.23e-17!42;UBERON:0006562!5.99e-17!24;UBERON:0001557!5.99e-17!24;UBERON:0001042!5.99e-17!24;UBERON:0008814!5.99e-17!24;UBERON:0009145!5.99e-17!24;UBERON:0002390!9.41e-17!45;UBERON:0003061!9.41e-17!45;UBERON:0000065!1.26e-16!41;UBERON:0000072!1.75e-14!27;UBERON:0000063!6.16e-13!35;UBERON:0002405!5.02e-11!70;UBERON:0005057!3.37e-10!51;UBERON:0001041!6.04e-10!92;UBERON:0001007!9.24e-10!128;UBERON:0001555!9.24e-10!128;UBERON:0007026!9.24e-10!128;UBERON:0000077!1.02e-09!97;UBERON:0004119!1.90e-09!130;UBERON:0000925!1.90e-09!130;UBERON:0006595!1.90e-09!130;UBERON:0004921!2.09e-09!126;UBERON:0004185!2.09e-09!126;UBERON:0003081!2.68e-09!88;UBERON:0005911!8.88e-09!69;UBERON:0002530!2.93e-07!65;UBERON:0003104!4.69e-07!131;UBERON:0009142!4.69e-07!131 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.00e-33,23;UBERON:0000974,1.00e-33,23;UBERON:0004807,1.00e-33,23;UBERON:0005058,1.00e-33,23;UBERON:0003351,1.00e-33,23;UBERON:0009113,1.00e-33,23;UBERON:0003295,1.00e-33,23;UBERON:0009722,1.00e-33,23;UBERON:0005562,1.00e-33,23;UBERON:0007690,1.00e-33,23;UBERON:0004177,1.75e-33,29;UBERON:0005057,1.75e-33,29;UBERON:0006562,3.34e-32,24;UBERON:0003408,3.34e-32,24;UBERON:0001557,3.34e-32,24;UBERON:0001042,3.34e-32,24;UBERON:0008814,3.34e-32,24;UBERON:0009145,3.34e-32,24;UBERON:0000072,2.61e-28,27;UBERON:0000077,3.36e-27,35;UBERON:0002193,6.43e-27,48;UBERON:0002405,6.43e-27,48;UBERON:0002390,7.89e-26,45;UBERON:0003061,7.89e-26,45;UBERON:0007811,1.62e-20,36;UBERON:0000065,3.85e-20,41;UBERON:0001004,1.37e-19,42;UBERON:0000153,1.05e-16,43;UBERON:0003929,2.00e-12,55;UBERON:0003081,1.20e-11,87;UBERON:0001041,1.88e-11,80;UBERON:0002368,3.79e-11,60;UBERON:0005911,1.03e-10,69;UBERON:0002530,4.57e-10,65;UBERON:0000490,7.18e-10,66;UBERON:0004921,4.69e-09,114;UBERON:0001007,7.80e-09,116;UBERON:0001555,7.80e-09,116;UBERON:0007026,7.80e-09,116;UBERON:0000949,8.34e-09,72;UBERON:0004119,1.28e-08,118;UBERON:0000925,1.28e-08,118;UBERON:0006595,1.28e-08,118;UBERON:0001155,1.74e-07,2;UBERON:0000059,1.74e-07,2;UBERON:0000926,1.90e-07,120;UBERON:0004120,1.90e-07,120;UBERON:0006603,1.90e-07,120 | |||
|phase1_expression=0,0,0,0,0,0,0,5.55230290798778,1168.26481641453,813.374228968927,130.125655851384,143.829202668592,69.3362956221383,65.2156202045721,0,0.404950534779652,0,3.62781490161973,2.19383093769182,0.42438965179803,0.255129870453209,0,0,0.159992422793407,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,30.4652099644765,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,17.3488382043605,0.148442139064825,0,0,0,0,0,0,0,0.289198713839823,0,0.161766849947409,0,0,1.86391761218122,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268412837520744,0,0,0.660837565967596,0,0,0,0,0,0,0,0,0,0,0,0.58489226135736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47802552133284,0,0,0,0,0,0,0,0.472905432318573,0.221464689648775,0.159454768657487,0.327726629431476,0.172684981865896,0.723245292907558,0,0,0.983528546038072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0.712994756769443,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.32977250588296,0,0,0,0,0.291480836629851,0,1.19609616558497,0,0,0.376736914009382,1.36694227721025,0.915112692826091,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,3.79213344753814,0,0,0.129920822977795,0,0.79472541912506,4.68762253127878,3.83992770653901,3.73575864808146,2.74344503957999,5.04130925684203,6.72459377104292,5.38786313185845,6.19447581562315,0,0,0,0,0,0,0.183151624267265,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,5.55230290798778,1168.26481641453,813.374228968927,130.125655851384,143.829202668592,69.3362956221383,65.2156202045721,0,0.404950534779652,0,3.62781490161973,2.19383093769182,0.42438965179803,0.255129870453209,0,0,0.159992422793407,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,30.4652099644765,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,17.3488382043605,0.148442139064825,0,0,0,0,0,0,0,0.289198713839823,0,0.161766849947409,0,0,1.86391761218122,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268412837520744,0,0,0.660837565967596,0,0,0,0,0,0,0,0,0,0,0,0.58489226135736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47802552133284,0,0,0,0,0,0,0,0.472905432318573,0.221464689648775,0.159454768657487,0.327726629431476,0.172684981865896,0.723245292907558,0,0,0.983528546038072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0.712994756769443,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.32977250588296,0,0,0,0,0.291480836629851,0,1.19609616558497,0,0,0.376736914009382,1.36694227721025,0.915112692826091,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,3.79213344753814,0,0,0.129920822977795,0,0.79472541912506,4.68762253127878,3.83992770653901,3.73575864808146,2.74344503957999,5.04130925684203,6.72459377104292,5.38786313185845,6.19447581562315,0,0,0,0,0,0,0.183151624267265,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@Cd40lg | |short_description=p2@Cd40lg | ||
}} | }} |
Latest revision as of 22:08, 1 October 2015
Short description: | p2@Cd40lg |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cd40lg_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | -1bp_to_ENSMUST00000033466, NM_011616, uc009thb.1_5end |
EntrezGene: | Cd40lg |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data