FFCP PHASE1:Mm9::chr19:12873064..12873079,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr19:12873064..12873079,+ to FFCP PHASE1:Mm9::chr19:12873064..12873079,+: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=107321 | |EntrezGene=107321 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=404 | |||
|TSSclassifier=NA | |||
|UniProt=Q99N69 | |UniProt=Q99N69 | ||
|association_with_transcript=-16bp_to_ENSMUST00000025601_5end | |||
|cluster_id=chr19:12873064..12873079,+ | |||
|description=CAGE_peak_1_at_Lpxn_5end | |||
|id=chr19:12873064..12873079,+ | |||
|ontology_enrichment_celltype=CL:0000988!2.19e-12!32;CL:0002032!2.19e-12!32;CL:0000037!2.19e-12!32;CL:0000566!2.19e-12!32;CL:0000837!2.19e-12!32;CL:0002031!5.02e-10!25;CL:0000738!1.90e-09!17;CL:0002087!1.90e-09!17;CL:0000838!2.26e-08!12;CL:0000084!1.06e-07!11;CL:0000827!1.06e-07!11;CL:0000542!1.69e-07!13;CL:0000051!1.69e-07!13;CL:0002320!1.72e-07!46;CL:0000134!1.72e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.22e-15,32;CL:0002032,1.22e-15,32;CL:0000037,1.22e-15,32;CL:0000837,1.22e-15,32;CL:0002031,6.08e-13,25;CL:0000738,7.10e-11,17;CL:0002087,7.10e-11,17;CL:0002320,7.97e-11,46;CL:0000134,7.97e-11,46;CL:0000838,9.84e-10,12;CL:0000084,6.29e-09,11;CL:0000827,6.29e-09,11;CL:0000542,1.53e-08,13;CL:0000051,1.53e-08,13;CL:0000049,2.20e-08,19;CL:0000219,5.93e-08,54;CL:0000791,1.27e-07,9;CL:0000789,1.27e-07,9;CL:0002420,1.27e-07,9;CL:0002419,1.27e-07,9;CL:0000790,1.27e-07,9;CL:0000624,7.51e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!9.38e-22!48;UBERON:0002390!6.09e-20!45;UBERON:0003061!6.09e-20!45;UBERON:0002405!8.28e-19!70;UBERON:0003081!2.34e-13!88;UBERON:0004177!8.65e-11!29;UBERON:0002371!3.65e-10!16;UBERON:0005057!6.33e-09!51;UBERON:0001474!1.02e-08!22;UBERON:0004765!1.02e-08!22;UBERON:0001434!1.02e-08!22;UBERON:0000926!1.04e-08!193;UBERON:0004120!1.04e-08!193;UBERON:0006603!1.04e-08!193;UBERON:0003408!1.54e-08!24;UBERON:0002370!3.96e-08!23;UBERON:0000974!3.96e-08!23;UBERON:0004807!3.96e-08!23;UBERON:0005058!3.96e-08!23;UBERON:0003351!3.96e-08!23;UBERON:0009113!3.96e-08!23;UBERON:0003295!3.96e-08!23;UBERON:0009722!3.96e-08!23;UBERON:0005562!3.96e-08!23;UBERON:0007690!3.96e-08!23;UBERON:0006562!6.13e-08!24;UBERON:0001557!6.13e-08!24;UBERON:0001042!6.13e-08!24;UBERON:0008814!6.13e-08!24;UBERON:0009145!6.13e-08!24;UBERON:0002204!1.32e-07!32;UBERON:0002384!1.72e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.50e-27,48;UBERON:0002405,3.50e-27,48;UBERON:0002390,5.58e-25,45;UBERON:0003061,5.58e-25,45;UBERON:0004177,8.02e-14,29;UBERON:0005057,8.02e-14,29;UBERON:0003081,8.80e-14,87;UBERON:0002371,7.02e-12,16;UBERON:0003408,4.49e-11,24;UBERON:0000077,4.51e-11,35;UBERON:0002384,7.97e-11,46;UBERON:0002370,1.42e-10,23;UBERON:0000974,1.42e-10,23;UBERON:0004807,1.42e-10,23;UBERON:0005058,1.42e-10,23;UBERON:0003351,1.42e-10,23;UBERON:0009113,1.42e-10,23;UBERON:0003295,1.42e-10,23;UBERON:0009722,1.42e-10,23;UBERON:0005562,1.42e-10,23;UBERON:0007690,1.42e-10,23;UBERON:0001474,1.73e-10,22;UBERON:0004765,1.73e-10,22;UBERON:0001434,1.73e-10,22;UBERON:0000926,8.57e-10,120;UBERON:0004120,8.57e-10,120;UBERON:0006603,8.57e-10,120;UBERON:0006562,9.41e-10,24;UBERON:0001557,9.41e-10,24;UBERON:0001042,9.41e-10,24;UBERON:0008814,9.41e-10,24;UBERON:0009145,9.41e-10,24;UBERON:0002204,1.94e-09,32;UBERON:0001004,5.72e-08,42;UBERON:0000072,1.06e-07,27;UBERON:0000065,1.50e-07,41;UBERON:0001041,1.76e-07,80 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,50.6163427890979,17.5985902689583,17.3207749478275,7.19115466547121,7.17949430958028,17.462474452983,23.3412474458723,10.6595123781012,13.5658429151183,6.29605690315332,72.7140291150738,64.1695549274857,75.5413580200494,2.04103896362567,11.3191684369009,20.8959831311148,10.239515058778,10.3234176480227,0.57423196411502,0,0,1.90023419456374,3.02436155711917,3.32595765982957,0,0,0,0,0,0,3.76678467663217,15.626706890476,3.14114246384279,1.17646297606203,0.683045484958446,1.45653105909346,0,0.101376931219515,0,0.782391344348039,0,0,0,0.139986421625363,0,68.2875206654987,30.4652099644765,34.2815675125313,0.771778308107841,2.86533439938757,3.09403255366465,0,0,0,0,0,24.7472422252385,45.4878526780808,32.6820852875206,4.79360176829448,3.07374644257244,0,0.135005938331691,0,0.285650984403804,0.441737081903227,0,0,0,0,0.893811366596314,0.614426133024974,0.131886287730194,0,0,0,1.68828783009504,0.45839474333043,0,0.142371680799103,0.745597783301202,3.71058347332602,0.906858721281426,0.289864488701678,1.72084775396277,0.679971333707751,0,0.649776417447669,0,2.52799956237153,0,0,0,0,0,0,0,0,0,0,3.53970027129086,80.7886196979176,4.30482203287992,0.346970653532272,0,0.922461989024234,0.60289056221049,1.64624189989987,1.38233250462643,0.247194967734374,4.33798070759735,6.19227386364912,1.7794353494215,2.65009822152472,1.45462575940567,1.86391761218122,0,0,4.34276993854605,12.2211426996039,8.99854096490112,15.1213570216947,0.748953197024114,0,0,0.521472960576829,0.511430914660661,0.62336413367868,0.486723789203273,1.42575109390443,5.84712761867437,1.51633655060205,1.89397670297827,0.130120442962704,0,0,0.30140963567143,0.204109497453984,0.384341160854549,0.281105173679186,0.517406741478031,0,0.567318240503458,0,0.43839146485515,1.66828349535359,0.696504333044333,3.70407845534298,0,11.2354109970118,9.77922047035918,12.7873574728017,0.207125772535502,0.703578179943289,0.720248245844059,0.710234206755631,0.787056926989615,0.462801338662135,0.232533944750408,0.268273401399619,1.05088808130453,0.329119699826961,0.985004784474571,0.891756905004413,1.16959989940266,2.63460138349261,2.28150911892632,0.841159794256509,0.205809224758569,6.27795687669216,0.264450566663544,0.426576501070468,0.464473343720877,0.128867461322093,1.4117846723634,1.11189021922435,0.760902504450237,0.474529061544512,0.658795818896044,0.754005626400808,1.39269530428806,1.9496408711912,2.69645822596266,1.51296634912286,1.99141273254367,0,0.114248512609729,0,0.814605311381257,0,0.49095073923223,0.632365371242573,0.442830443938806,1.255989822731,0.740382983530803,2.66807364378434,0.333690211432188,0.393117990226406,0.899448449539415,1.21716072833102,0.482354319504834,0.763877555344259,2.5892652370573,4.05338066937588,2.47105271869273,2.87536413054709,5.20997326735905,4.36852742360385,1.26289438973556,2.15276896226295,2.8946611281802,7.02062122633098,0.189491411770485,0,0.169745085775188,0.938760993154008,0.670025029767263,1.19021820443007,1.95133647857799,1.41871629695572,2.43611158613652,2.07291199254733,4.91589944147214,6.90739927463582,5.93061140184197,144.759632581701,125.642212962122,3.93411418415229,3.58717770196152,0.963303539926752,0.937693492737625,0,1.26235463602186,0,0,0,0,0,0,0,0,0,1.28528526568723,1.56134093729095,0.534196811001766,0.977321756121456,2.63952196756057,0,0.485561272309963,0.302323556964751,1.13163047853539,0,1.53717573971964,2.84271122485043,1.45413491791002,0.356497378384721,2.84433082142234,1.05418608574999,1.03135543248187,1.36175842301515,0.36012218806262,0,0.428674070063185,0.532020700926821,0.891844088010353,0.493647061806363,0,0.704015124191131,0.42366414172764,0.882113592219848,3.62749756471256,4.03661066739764,1.14594557363496,1.07435109602823,1.31312719796049,2.04036585640896,0.927126510052548,16.7453463181896,3.50857675537478,5.92622487583077,6.2161590811548,12.5758689503343,15.7856939512501,3.0596117398894,3.91864066506242,2.07299960706636,0,0.158167996790568,0.609958401380546,0.648032044930808,0.836353184057875,0.218362563746178,0.269728692769641,1.81837602595739,1.83229159388821,1.16653475962614,6.83473244395618,0,0.149516546043979,0.496375471371293,0.194451188344048,0,0.337912250981556,0.352071715937262,0.13020438484395,0.524296722128554,0.724752362478018,0.288030006257865,14.5365115488962,3.64905387522296,5.13554785824136,7.27556608675652,9.30938817470904,10.7287931581883,14.7840402909562,9.89519832069667,13.5295042930518,13.56481158459,16.5354943624418,18.6144552212927,19.3385801697062,21.7391038057718,0.906921534460845,0,0,0,2.51146472241848,2.43987218086537,2.56412273974171,1.71494703263253,3.00943262421218,0.564751842617067,0,0.572895513439397,0.859265911718438,0,0.755393897389701,0.675022500231806,0.900642406448441,0,0,0.103787347584177,0,0.512200817262403,0.729320151204882,0.419226325255965,1.2869045591501,0.888986911206461,1.03017528619447,0.962757628775446,0.758091635291392,0,0.943131706930381,0.936415074698824,0.832326981263301,0.804096565378586,1.42888107384922,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|phase1_expression=0.320297694209588,0,0,0,0,0,0,50.6163427890979,17.5985902689583,17.3207749478275,7.19115466547121,7.17949430958028,17.462474452983,23.3412474458723,10.6595123781012,13.5658429151183,6.29605690315332,72.7140291150738,64.1695549274857,75.5413580200494,2.04103896362567,11.3191684369009,20.8959831311148,10.239515058778,10.3234176480227,0.57423196411502,0,0,1.90023419456374,3.02436155711917,3.32595765982957,0,0,0,0,0,0,3.76678467663217,15.626706890476,3.14114246384279,1.17646297606203,0.683045484958446,1.45653105909346,0,0.101376931219515,0,0.782391344348039,0,0,0,0.139986421625363,0,68.2875206654987,30.4652099644765,34.2815675125313,0.771778308107841,2.86533439938757,3.09403255366465,0,0,0,0,0,24.7472422252385,45.4878526780808,32.6820852875206,4.79360176829448,3.07374644257244,0,0.135005938331691,0,0.285650984403804,0.441737081903227,0,0,0,0,0.893811366596314,0.614426133024974,0.131886287730194,0,0,0,1.68828783009504,0.45839474333043,0,0.142371680799103,0.745597783301202,3.71058347332602,0.906858721281426,0.289864488701678,1.72084775396277,0.679971333707751,0,0.649776417447669,0,2.52799956237153,0,0,0,0,0,0,0,0,0,0,3.53970027129086,80.7886196979176,4.30482203287992,0.346970653532272,0,0.922461989024234,0.60289056221049,1.64624189989987,1.38233250462643,0.247194967734374,4.33798070759735,6.19227386364912,1.7794353494215,2.65009822152472,1.45462575940567,1.86391761218122,0,0,4.34276993854605,12.2211426996039,8.99854096490112,15.1213570216947,0.748953197024114,0,0,0.521472960576829,0.511430914660661,0.62336413367868,0.486723789203273,1.42575109390443,5.84712761867437,1.51633655060205,1.89397670297827,0.130120442962704,0,0,0.30140963567143,0.204109497453984,0.384341160854549,0.281105173679186,0.517406741478031,0,0.567318240503458,0,0.43839146485515,1.66828349535359,0.696504333044333,3.70407845534298,0,11.2354109970118,9.77922047035918,12.7873574728017,0.207125772535502,0.703578179943289,0.720248245844059,0.710234206755631,0.787056926989615,0.462801338662135,0.232533944750408,0.268273401399619,1.05088808130453,0.329119699826961,0.985004784474571,0.891756905004413,1.16959989940266,2.63460138349261,2.28150911892632,0.841159794256509,0.205809224758569,6.27795687669216,0.264450566663544,0.426576501070468,0.464473343720877,0.128867461322093,1.4117846723634,1.11189021922435,0.760902504450237,0.474529061544512,0.658795818896044,0.754005626400808,1.39269530428806,1.9496408711912,2.69645822596266,1.51296634912286,1.99141273254367,0,0.114248512609729,0,0.814605311381257,0,0.49095073923223,0.632365371242573,0.442830443938806,1.255989822731,0.740382983530803,2.66807364378434,0.333690211432188,0.393117990226406,0.899448449539415,1.21716072833102,0.482354319504834,0.763877555344259,2.5892652370573,4.05338066937588,2.47105271869273,2.87536413054709,5.20997326735905,4.36852742360385,1.26289438973556,2.15276896226295,2.8946611281802,7.02062122633098,0.189491411770485,0,0.169745085775188,0.938760993154008,0.670025029767263,1.19021820443007,1.95133647857799,1.41871629695572,2.43611158613652,2.07291199254733,4.91589944147214,6.90739927463582,5.93061140184197,144.759632581701,125.642212962122,3.93411418415229,3.58717770196152,0.963303539926752,0.937693492737625,0,1.26235463602186,0,0,0,0,0,0,0,0,0,1.28528526568723,1.56134093729095,0.534196811001766,0.977321756121456,2.63952196756057,0,0.485561272309963,0.302323556964751,1.13163047853539,0,1.53717573971964,2.84271122485043,1.45413491791002,0.356497378384721,2.84433082142234,1.05418608574999,1.03135543248187,1.36175842301515,0.36012218806262,0,0.428674070063185,0.532020700926821,0.891844088010353,0.493647061806363,0,0.704015124191131,0.42366414172764,0.882113592219848,3.62749756471256,4.03661066739764,1.14594557363496,1.07435109602823,1.31312719796049,2.04036585640896,0.927126510052548,16.7453463181896,3.50857675537478,5.92622487583077,6.2161590811548,12.5758689503343,15.7856939512501,3.0596117398894,3.91864066506242,2.07299960706636,0,0.158167996790568,0.609958401380546,0.648032044930808,0.836353184057875,0.218362563746178,0.269728692769641,1.81837602595739,1.83229159388821,1.16653475962614,6.83473244395618,0,0.149516546043979,0.496375471371293,0.194451188344048,0,0.337912250981556,0.352071715937262,0.13020438484395,0.524296722128554,0.724752362478018,0.288030006257865,14.5365115488962,3.64905387522296,5.13554785824136,7.27556608675652,9.30938817470904,10.7287931581883,14.7840402909562,9.89519832069667,13.5295042930518,13.56481158459,16.5354943624418,18.6144552212927,19.3385801697062,21.7391038057718,0.906921534460845,0,0,0,2.51146472241848,2.43987218086537,2.56412273974171,1.71494703263253,3.00943262421218,0.564751842617067,0,0.572895513439397,0.859265911718438,0,0.755393897389701,0.675022500231806,0.900642406448441,0,0,0.103787347584177,0,0.512200817262403,0.729320151204882,0.419226325255965,1.2869045591501,0.888986911206461,1.03017528619447,0.962757628775446,0.758091635291392,0,0.943131706930381,0.936415074698824,0.832326981263301,0.804096565378586,1.42888107384922,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| ||
|short_description=p1@Lpxn | |||
}} | }} |
Latest revision as of 22:36, 1 October 2015
Short description: | p1@Lpxn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Lpxn_5end |
Coexpression cluster: | MCL_coexpression_mm9:404 |
Association with transcript: | -16bp_to_ENSMUST00000025601_5end |
EntrezGene: | Lpxn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.22e-15 | 32 |
hematopoietic oligopotent progenitor cell | 1.22e-15 | 32 |
hematopoietic stem cell | 1.22e-15 | 32 |
hematopoietic multipotent progenitor cell | 1.22e-15 | 32 |
hematopoietic lineage restricted progenitor cell | 6.08e-13 | 25 |
leukocyte | 7.10e-11 | 17 |
nongranular leukocyte | 7.10e-11 | 17 |
connective tissue cell | 7.97e-11 | 46 |
mesenchymal cell | 7.97e-11 | 46 |
lymphoid lineage restricted progenitor cell | 9.84e-10 | 12 |
T cell | 6.29e-09 | 11 |
pro-T cell | 6.29e-09 | 11 |
lymphocyte | 1.53e-08 | 13 |
common lymphoid progenitor | 1.53e-08 | 13 |
common myeloid progenitor | 2.20e-08 | 19 |
motile cell | 5.93e-08 | 54 |
mature alpha-beta T cell | 1.27e-07 | 9 |
alpha-beta T cell | 1.27e-07 | 9 |
immature T cell | 1.27e-07 | 9 |
mature T cell | 1.27e-07 | 9 |
immature alpha-beta T cell | 1.27e-07 | 9 |
CD4-positive, alpha-beta T cell | 7.51e-07 | 8 |