FFCP PHASE1:Mm9::chrX:99266527..99266543,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=331474 | |EntrezGene=331474 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3768 | |MCL_coexpression_id=3768 | ||
|TSSclassifier=NA | |||
|UniProt=Q5DTT4 | |UniProt=Q5DTT4 | ||
|association_with_transcript=0bp_to_ENSMUST00000113631_5end | |association_with_transcript=0bp_to_ENSMUST00000113631_5end | ||
|cluster_id=chrX:99266527..99266543,- | |||
|description=CAGE_peak_1_at_Rgag4_5end | |description=CAGE_peak_1_at_Rgag4_5end | ||
|id=chrX:99266527..99266543,- | |id=chrX:99266527..99266543,- | ||
|ontology_enrichment_celltype=CL:0000117!1.35e-13!23;CL:0000337!1.35e-13!23;CL:0000540!2.14e-13!33;CL:0000047!2.14e-13!33;CL:0000031!2.14e-13!33;CL:0000404!2.14e-13!33;CL:0000393!9.39e-12!39;CL:0000211!9.39e-12!39;CL:0000221!1.98e-07!44;CL:0000133!1.98e-07!44;CL:0002319!5.55e-07!43 | |ontology_enrichment_celltype=CL:0000117!1.35e-13!23;CL:0000337!1.35e-13!23;CL:0000540!2.14e-13!33;CL:0000047!2.14e-13!33;CL:0000031!2.14e-13!33;CL:0000404!2.14e-13!33;CL:0000393!9.39e-12!39;CL:0000211!9.39e-12!39;CL:0000221!1.98e-07!44;CL:0000133!1.98e-07!44;CL:0002319!5.55e-07!43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.11e-14,23;CL:0000337,5.11e-14,23;CL:0000540,8.19e-14,33;CL:0000047,8.19e-14,33;CL:0000031,8.19e-14,33;CL:0000404,8.19e-14,33;CL:0000393,4.11e-12,39;CL:0000211,4.11e-12,39;CL:0000221,5.63e-07,44;CL:0000133,5.63e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.70e-21!73;UBERON:0005743!1.70e-21!73;UBERON:0002346!2.36e-21!71;UBERON:0003075!2.36e-21!71;UBERON:0007284!2.36e-21!71;UBERON:0000033!2.79e-20!63;UBERON:0000073!4.13e-20!75;UBERON:0001016!4.13e-20!75;UBERON:0001049!9.31e-20!52;UBERON:0005068!9.31e-20!52;UBERON:0006241!9.31e-20!52;UBERON:0007135!9.31e-20!52;UBERON:0004121!2.08e-19!102;UBERON:0000924!2.08e-19!102;UBERON:0006601!2.08e-19!102;UBERON:0003056!2.61e-19!49;UBERON:0000955!3.48e-19!50;UBERON:0006238!3.48e-19!50;UBERON:0002616!1.67e-18!49;UBERON:0003080!2.94e-18!40;UBERON:0002780!1.30e-17!39;UBERON:0001890!1.30e-17!39;UBERON:0006240!1.30e-17!39;UBERON:0002020!2.37e-13!34;UBERON:0002791!4.14e-11!29;UBERON:0003528!4.14e-11!29;UBERON:0001893!4.14e-11!29;UBERON:0000153!2.67e-10!94;UBERON:0007811!6.00e-09!86;UBERON:0001894!6.48e-08!10;UBERON:0006222!6.48e-08!10;UBERON:0000025!8.25e-08!114;UBERON:0000468!9.86e-08!333;UBERON:0004111!3.40e-07!122;UBERON:0000007!8.93e-07!8;UBERON:0003296!8.93e-07!8;UBERON:0010133!8.93e-07!8 | |ontology_enrichment_uberon=UBERON:0001017!1.70e-21!73;UBERON:0005743!1.70e-21!73;UBERON:0002346!2.36e-21!71;UBERON:0003075!2.36e-21!71;UBERON:0007284!2.36e-21!71;UBERON:0000033!2.79e-20!63;UBERON:0000073!4.13e-20!75;UBERON:0001016!4.13e-20!75;UBERON:0001049!9.31e-20!52;UBERON:0005068!9.31e-20!52;UBERON:0006241!9.31e-20!52;UBERON:0007135!9.31e-20!52;UBERON:0004121!2.08e-19!102;UBERON:0000924!2.08e-19!102;UBERON:0006601!2.08e-19!102;UBERON:0003056!2.61e-19!49;UBERON:0000955!3.48e-19!50;UBERON:0006238!3.48e-19!50;UBERON:0002616!1.67e-18!49;UBERON:0003080!2.94e-18!40;UBERON:0002780!1.30e-17!39;UBERON:0001890!1.30e-17!39;UBERON:0006240!1.30e-17!39;UBERON:0002020!2.37e-13!34;UBERON:0002791!4.14e-11!29;UBERON:0003528!4.14e-11!29;UBERON:0001893!4.14e-11!29;UBERON:0000153!2.67e-10!94;UBERON:0007811!6.00e-09!86;UBERON:0001894!6.48e-08!10;UBERON:0006222!6.48e-08!10;UBERON:0000025!8.25e-08!114;UBERON:0000468!9.86e-08!333;UBERON:0004111!3.40e-07!122;UBERON:0000007!8.93e-07!8;UBERON:0003296!8.93e-07!8;UBERON:0010133!8.93e-07!8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.96e-21,73;UBERON:0002346,2.97e-21,64;UBERON:0003075,2.97e-21,64;UBERON:0007284,2.97e-21,64;UBERON:0000073,5.96e-21,54;UBERON:0001016,8.06e-20,75;UBERON:0001049,1.04e-19,52;UBERON:0005068,1.04e-19,52;UBERON:0006241,1.04e-19,52;UBERON:0007135,1.04e-19,52;UBERON:0003056,1.44e-19,49;UBERON:0010371,6.92e-19,73;UBERON:0003080,1.86e-18,40;UBERON:0004121,5.08e-18,95;UBERON:0000924,5.08e-18,95;UBERON:0006601,5.08e-18,95;UBERON:0002780,8.62e-18,39;UBERON:0001890,8.62e-18,39;UBERON:0006240,8.62e-18,39;UBERON:0000955,2.57e-17,47;UBERON:0006238,2.57e-17,47;UBERON:0010314,9.58e-17,92;UBERON:0002616,1.23e-16,46;UBERON:0002020,2.05e-13,34;UBERON:0003528,4.19e-11,29;UBERON:0002791,4.19e-11,29;UBERON:0001893,4.19e-11,29;UBERON:0001894,3.86e-08,10;UBERON:0006222,3.86e-08,10;UBERON:0000025,3.27e-07,114;UBERON:0000007,5.83e-07,8;UBERON:0003296,5.83e-07,8;UBERON:0010133,5.83e-07,8;UBERON:0002420,9.64e-07,8;UBERON:0007245,9.64e-07,8;UBERON:0010009,9.64e-07,8;UBERON:0010011,9.64e-07,8;UBERON:0000454,9.64e-07,8 | |||
|phase1_expression=11.0502704502308,0,0,0,0,0.16787927191189,0.233612640595526,0.258246646883153,11.2630977721333,14.9801296846076,0,0.0797721589953364,0,0,0.333109761815663,0.202475267389826,0,0.473193248037357,0.411343300817216,0.42438965179803,4.33720779770456,0.297872853602656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02152363141385,2.12891555560981,4.22157529971868,0.782391344348039,0.218025156380447,0.439372365468944,0.388859798148567,0.279972843250725,0,0.167782606057736,0.725362142011344,0.336093799142464,2.82985379639542,1.14613375975503,1.54701627683233,20.2316460859598,17.9856932952491,17.1134478946668,0.677689064138264,0.889294796111139,3.1496490104849,3.9554654502679,1.4209602298922,0.299600110518405,0.384218305321555,11.9243054154749,12.8255641415106,8.41299845405528,7.42692559449889,10.3808214247258,14.4539143073646,13.2266750005166,18.3843757322004,18.7196997698961,14.939418555967,16.4358990584181,48.4022675969811,30.1909223887952,42.7148963856543,19.5428099300967,23.6360296213306,21.2389564409766,13.258286346315,9.5389026135399,15.8439528951505,0.227178579999552,0.453429360640713,1.73918693221007,0,0,0.539703191637817,0.649776417447669,0,1.12355536105401,0.170430322578058,0,0,19.0138616698519,0,0,0,0,0,0,1.25602267690966,5.17875767294343,6.67989625791711,5.03107447621794,6.08930956624282,2.53677046981664,4.22023393547343,4.46837087115678,1.13099932196708,1.23597483867187,0.86759614151947,0.884610551949874,1.7794353494215,2.42925670306433,1.45462575940567,0,1.46390398505774,1.8850203613211,0.255457055208591,0.838705871541442,1.79970819298022,1.65191295194984,22.7681771895331,23.33253074375,25.8847965352501,10.081810571152,6.39288643325826,22.0255327233134,18.1710214635889,5.49932564791708,4.35424397135326,12.8888606801174,3.15662783829711,7.54698569183682,5.51765050640335,8.64298223065676,6.17889753126432,5.51095643125756,4.74020765053944,4.68508622798644,2.58703370739016,2.80238390812695,10.2117283290622,11.6127741948206,4.60311038097907,8.06337022754234,2.78601733217733,3.90986059175093,7.36426787228425,0,0.51469581422943,0,4.34964122324554,3.75241695969754,5.22179978236943,3.07768156260773,2.16440654922144,1.69693824176116,1.39520366850245,1.60964040839772,1.5179494507732,1.15191894939436,1.64167464079095,1.13496333364198,0.877199924551994,0.878200461164203,0.536825675041487,4.83666881697493,9.15851050175631,0.330418782983798,0.264450566663544,6.39864751605702,4.18026009348789,5.28356591420583,5.44545516483025,4.89231696458715,1.14135375667535,0,1.31759163779209,1.75934646160189,1.79060824837036,1.16978452271472,0,0.648414149624083,0.398282546508734,5.69003702859245,7.08340778180319,10.1436962105772,6.92414514674068,6.98228953803453,4.62896411276103,8.34722290040196,4.87113488332687,4.55296310739987,3.33172342588861,0,1.33476084572875,2.16214894624523,0.449724224769707,0.608580364165509,0.72353147925725,1.2731292589071,0,1.13494658742525,0,5.75072826109418,0.744281895337007,1.87222603868736,0,0.179397413521912,0,1.10851914099963,5.49525094134406,4.72598431681875,4.75286240170527,7.51008794523207,4.69017520837084,5.47500374037832,5.07347484430277,2.52216230569906,3.98636441367795,2.87018583583477,1.3109065177259,1.38147985492716,1.59113964439663,1.50791283939272,3.80733978673097,2.95058563811422,1.37968373152366,13.1651483789989,13.5965556446956,0.327869890753351,0,3.15508219416257,3.51394869866975,6.46270193198397,2.62865677747807,3.11918143715352,3.39691836946599,4.45291771842384,6.72188473196017,5.92931666919785,29.8828824272281,2.41298144854057,9.08134578703002,4.72372182125371,4.12425307431339,1.32745138339963,8.25454162926937,3.02323556964751,4.71512699389745,5.02013217897314,3.3817866273832,1.80899805217755,2.90826983582004,2.13898427030833,1.8962205476149,0,2.06271086496374,45.9593467767614,29.3499583271036,42.170930913178,30.2215219394545,42.7389963077879,31.2145430803623,24.517804069716,23.4438010818241,0.23467170806371,0.42366414172764,1.32317038832977,3.95727007059552,1.13025098687134,0.844380948994182,0.716234064018819,0.328281799490123,0.874442509889552,15.2048747648618,1.19609616558497,7.42992724667601,7.03739204004904,0.376736914009382,0.27338845544205,1.37266903923914,1.35982743995084,1.81936888020755,1.93479963326193,1.90934123603023,7.43389584915668,7.72613975082025,5.83228840437727,3.13632444021703,4.58561383866973,2.29269388854195,2.72756403893609,0.785267825952089,0.388844919875379,1.24267862617385,0,2.0932316446157,1.32366792365678,2.13896307178452,1.16243841129958,1.35164900392623,1.99507305697782,0.781226309063701,0.734015410979976,0,0,0.316011120628178,1.62180172232131,1.74608627180206,0.51968329191118,0.358053391334963,0.39736270956253,0.240390899039938,0.738447635872886,0.403865799792591,0.228620419965,0.201652370273681,0.292373642219257,0,0,0.226730383615211,0,0.179427713218951,0.167884616364078,2.70465431645067,2.064507229963,2.01466786693992,0.214368379079066,0,5.0827665835536,9.66682996665071,6.87474616127276,11.5141632170271,5.48066015816514,11.3309084608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| ||
|short_description=p1@Rgag4 | |short_description=p1@Rgag4 | ||
}} | }} |
Latest revision as of 01:01, 2 October 2015
Short description: | p1@Rgag4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rgag4_5end |
Coexpression cluster: | MCL_coexpression_mm9:3768 |
Association with transcript: | 0bp_to_ENSMUST00000113631_5end |
EntrezGene: | Rgag4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.11e-14 | 23 |
neuroblast (sensu Vertebrata) | 5.11e-14 | 23 |
neuron | 8.19e-14 | 33 |
neuronal stem cell | 8.19e-14 | 33 |
neuroblast | 8.19e-14 | 33 |
electrically signaling cell | 8.19e-14 | 33 |
electrically responsive cell | 4.11e-12 | 39 |
electrically active cell | 4.11e-12 | 39 |
ectodermal cell | 5.63e-07 | 44 |
neurectodermal cell | 5.63e-07 | 44 |