FF:11475-119C8: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00004962 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00004962 | ||
|accession_numbers=CAGE;DRX008099;DRR008971;DRZ000396;DRZ001781;DRZ011746;DRZ013131 | |||
|accession_numbers_RNASeq=sRNA-Seq;DRX037006;DRR041372;DRZ007014 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0003688,UBERON:0002100,UBERON:0002384,UBERON:0000479,UBERON:0000064,UBERON:0000466,UBERON:0000062,UBERON:0000475,UBERON:0004120,UBERON:0004457,UBERON:0000061,UBERON:0000465,UBERON:0000063,UBERON:0004923,UBERON:0002553,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0009569,UBERON:0002323,UBERON:0000042,UBERON:0000464,UBERON:0004458,UBERON:0010317,UBERON:0002417,UBERON:0002358,UBERON:0000916,UBERON:0003684,UBERON:0001178 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0002320,CL:0002371,CL:0000325,CL:0000255,CL:0000136,CL:0002615 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000039 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 44: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Adipocyte%2520-%2520omental%252c%2520donor3.CNhs12068.11475-119C8.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Adipocyte%2520-%2520omental%252c%2520donor3.CNhs12068.11475-119C8.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Adipocyte%2520-%2520omental%252c%2520donor3.CNhs12068.11475-119C8.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Adipocyte%2520-%2520omental%252c%2520donor3.CNhs12068.11475-119C8.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Adipocyte%2520-%2520omental%252c%2520donor3.CNhs12068.11475-119C8.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11475-119C8 | |id=FF:11475-119C8 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000039 | ||
|is_obsolete= | |||
|library_id=CNhs12068 | |||
|library_id_phase_based=2:CNhs12068 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11475 | |||
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10002.GTGAAA.11475 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11475 | |||
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10002.GTGAAA.11475 | |||
|name=Adipocyte - omental, donor3 | |name=Adipocyte - omental, donor3 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 65: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12068,LSID838,release011,COMPLETED | |profile_hcage=CNhs12068,LSID838,release011,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=SRhi10002,,, | |profile_srnaseq=SRhi10002,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=119 | |rna_box=119 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 56: | Line 82: | ||
|rna_tube_id=119C8 | |rna_tube_id=119C8 | ||
|rna_weight_ug=20.7 | |rna_weight_ug=20.7 | ||
|rnaseq_library_id=SRhi10002.GTGAAA | |||
|sample_age= | |sample_age= | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 97: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.33659760494439e-223!GO:0005737;cytoplasm;3.48005157699908e-192!GO:0044444;cytoplasmic part;3.59577250856263e-164!GO:0043231;intracellular membrane-bound organelle;4.12114560140457e-146!GO:0043227;membrane-bound organelle;7.60915529437942e-146!GO:0043226;organelle;2.24570573799114e-143!GO:0043229;intracellular organelle;4.51216730717145e-143!GO:0044422;organelle part;1.72900078219987e-104!GO:0044446;intracellular organelle part;3.13935775176617e-103!GO:0005739;mitochondrion;7.35072332966284e-83!GO:0044237;cellular metabolic process;2.01967148161265e-68!GO:0030529;ribonucleoprotein complex;4.15816042388227e-67!GO:0032991;macromolecular complex;3.43205060983827e-66!GO:0044238;primary metabolic process;1.63688817002993e-65!GO:0031090;organelle membrane;5.93894804830704e-60!GO:0005515;protein binding;1.1178173070694e-57!GO:0043233;organelle lumen;1.39173196631056e-57!GO:0031974;membrane-enclosed lumen;1.39173196631056e-57!GO:0044429;mitochondrial part;1.95322623667472e-57!GO:0043170;macromolecule metabolic process;4.93402913312818e-51!GO:0009058;biosynthetic process;3.69367735166395e-48!GO:0003723;RNA binding;1.27834043875958e-47!GO:0005840;ribosome;8.14069263362176e-46!GO:0031967;organelle envelope;1.67285287544289e-43!GO:0031975;envelope;4.1516758130205e-43!GO:0006412;translation;4.51460650656176e-43!GO:0044249;cellular biosynthetic process;1.62226047966691e-42!GO:0003735;structural constituent of ribosome;1.7347395910515e-41!GO:0019538;protein metabolic process;2.09729121627066e-41!GO:0044428;nuclear part;4.47752397485841e-40!GO:0005829;cytosol;7.96529631187342e-40!GO:0005740;mitochondrial envelope;1.00566185125034e-38!GO:0015031;protein transport;2.44132753860565e-38!GO:0009059;macromolecule biosynthetic process;4.51392557402996e-38!GO:0044260;cellular macromolecule metabolic process;1.47828233138218e-37!GO:0031966;mitochondrial membrane;4.46276080617673e-37!GO:0033036;macromolecule localization;8.08448030688437e-37!GO:0033279;ribosomal subunit;8.22100370255618e-37!GO:0045184;establishment of protein localization;4.89780041739921e-36!GO:0044267;cellular protein metabolic process;1.22516999676427e-35!GO:0008104;protein localization;7.78104516858453e-35!GO:0016043;cellular component organization and biogenesis;6.21179298642264e-33!GO:0019866;organelle inner membrane;2.23781541327586e-32!GO:0005743;mitochondrial inner membrane;2.83828753068447e-32!GO:0043234;protein complex;4.31931541416712e-31!GO:0006396;RNA processing;1.39658598814614e-30!GO:0005783;endoplasmic reticulum;3.53533864160156e-30!GO:0005634;nucleus;2.53153115936324e-29!GO:0046907;intracellular transport;3.3276761549421e-29!GO:0005830;cytosolic ribosome (sensu Eukaryota);8.43995127470102e-26!GO:0031981;nuclear lumen;1.17634924078823e-25!GO:0016071;mRNA metabolic process;1.20700589603276e-25!GO:0006886;intracellular protein transport;1.79458394938567e-25!GO:0006119;oxidative phosphorylation;2.38921010702117e-24!GO:0044432;endoplasmic reticulum part;1.3413668524924e-23!GO:0008380;RNA splicing;1.83169703107061e-23!GO:0031980;mitochondrial lumen;2.27602944275348e-23!GO:0005759;mitochondrial matrix;2.27602944275348e-23!GO:0012505;endomembrane system;3.85620779542384e-22!GO:0010467;gene expression;4.58892347018911e-22!GO:0044455;mitochondrial membrane part;5.37349584644617e-22!GO:0006397;mRNA processing;9.96580276590929e-22!GO:0051186;cofactor metabolic process;1.36609059648057e-21!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.10234999285717e-20!GO:0044445;cytosolic part;2.62014903372969e-20!GO:0065003;macromolecular complex assembly;1.88094291615788e-19!GO:0006457;protein folding;2.88584049273166e-19!GO:0005746;mitochondrial respiratory chain;4.11196164517689e-19!GO:0015934;large ribosomal subunit;6.72549931713696e-19!GO:0015935;small ribosomal subunit;7.74272905087063e-19!GO:0016491;oxidoreductase activity;2.98560302875005e-18!GO:0043283;biopolymer metabolic process;3.6926290147758e-18!GO:0048770;pigment granule;4.89434142341865e-18!GO:0042470;melanosome;4.89434142341865e-18!GO:0006732;coenzyme metabolic process;6.53306270462651e-18!GO:0022607;cellular component assembly;1.50895115218755e-17!GO:0009055;electron carrier activity;2.84835946639656e-17!GO:0042175;nuclear envelope-endoplasmic reticulum network;5.21635459892614e-17!GO:0051649;establishment of cellular localization;5.33993842122143e-17!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;5.98995754100301e-17!GO:0006091;generation of precursor metabolites and energy;8.61709663633868e-17!GO:0051641;cellular localization;9.86534837371139e-17!GO:0005789;endoplasmic reticulum membrane;1.34701976685519e-16!GO:0005794;Golgi apparatus;1.58711523081165e-16!GO:0050136;NADH dehydrogenase (quinone) activity;2.10382251722369e-16!GO:0003954;NADH dehydrogenase activity;2.10382251722369e-16!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.10382251722369e-16!GO:0005681;spliceosome;7.46422778596242e-16!GO:0005654;nucleoplasm;1.51800302313242e-15!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.51800302313242e-15!GO:0048193;Golgi vesicle transport;9.30032085926962e-15!GO:0030964;NADH dehydrogenase complex (quinone);1.24578068620056e-14!GO:0045271;respiratory chain complex I;1.24578068620056e-14!GO:0005747;mitochondrial respiratory chain complex I;1.24578068620056e-14!GO:0042775;organelle ATP synthesis coupled electron transport;1.34618602482061e-14!GO:0042773;ATP synthesis coupled electron transport;1.34618602482061e-14!GO:0044248;cellular catabolic process;1.90365191407702e-14!GO:0022618;protein-RNA complex assembly;2.40842371229169e-14!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;4.25623450104181e-14!GO:0016874;ligase activity;4.62697098150571e-14!GO:0051082;unfolded protein binding;4.96922951201735e-14!GO:0005761;mitochondrial ribosome;5.05574379614079e-14!GO:0000313;organellar ribosome;5.05574379614079e-14!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;9.4521551717819e-14!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.0033508608041e-13!GO:0016817;hydrolase activity, acting on acid anhydrides;1.37899961939555e-13!GO:0016462;pyrophosphatase activity;1.41901028373309e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.47500966907881e-13!GO:0000502;proteasome complex (sensu Eukaryota);2.48983668510007e-13!GO:0044451;nucleoplasm part;2.74040996606345e-13!GO:0006996;organelle organization and biogenesis;3.38565911616074e-13!GO:0017111;nucleoside-triphosphatase activity;3.72042099205839e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);3.79877828022905e-13!GO:0008134;transcription factor binding;5.30922419984873e-13!GO:0008135;translation factor activity, nucleic acid binding;8.34056550335257e-13!GO:0006605;protein targeting;8.70615362288704e-13!GO:0006512;ubiquitin cycle;1.71713791920009e-12!GO:0044265;cellular macromolecule catabolic process;2.6278734927635e-12!GO:0016192;vesicle-mediated transport;2.83833279120113e-12!GO:0000166;nucleotide binding;6.87871889842947e-12!GO:0043285;biopolymer catabolic process;1.04789533344316e-11!GO:0051603;proteolysis involved in cellular protein catabolic process;1.21522704686848e-11!GO:0005793;ER-Golgi intermediate compartment;1.49517403198517e-11!GO:0044257;cellular protein catabolic process;2.34378947214888e-11!GO:0019941;modification-dependent protein catabolic process;2.52624887492876e-11!GO:0043632;modification-dependent macromolecule catabolic process;2.52624887492876e-11!GO:0009057;macromolecule catabolic process;3.34275803305554e-11!GO:0006511;ubiquitin-dependent protein catabolic process;3.83164336898671e-11!GO:0043228;non-membrane-bound organelle;6.18202644687892e-11!GO:0043232;intracellular non-membrane-bound organelle;6.18202644687892e-11!GO:0005730;nucleolus;7.08793059921471e-11!GO:0009060;aerobic respiration;2.59162976928152e-10!GO:0030163;protein catabolic process;2.90735037237494e-10!GO:0045333;cellular respiration;3.09696190104213e-10!GO:0008565;protein transporter activity;3.52375502697393e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;5.8920180996838e-10!GO:0012501;programmed cell death;6.87512706533111e-10!GO:0003743;translation initiation factor activity;8.24088967343149e-10!GO:0006413;translational initiation;9.06934987006205e-10!GO:0015980;energy derivation by oxidation of organic compounds;1.00553461007688e-09!GO:0051188;cofactor biosynthetic process;1.1461195558099e-09!GO:0006915;apoptosis;1.47341351697942e-09!GO:0044262;cellular carbohydrate metabolic process;1.54141407387887e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.68802196061591e-09!GO:0051187;cofactor catabolic process;1.7861837939084e-09!GO:0009109;coenzyme catabolic process;2.10690521874434e-09!GO:0008219;cell death;2.33074243181945e-09!GO:0016265;death;2.33074243181945e-09!GO:0006082;organic acid metabolic process;2.85025656049093e-09!GO:0019752;carboxylic acid metabolic process;3.09227686865396e-09!GO:0009056;catabolic process;3.35437942704416e-09!GO:0005788;endoplasmic reticulum lumen;4.1776336088702e-09!GO:0005768;endosome;4.20448672440079e-09!GO:0009199;ribonucleoside triphosphate metabolic process;4.28069290108521e-09!GO:0006446;regulation of translational initiation;4.95229043886659e-09!GO:0015986;ATP synthesis coupled proton transport;5.8534047674255e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;5.8534047674255e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;6.00447830432458e-09!GO:0009144;purine nucleoside triphosphate metabolic process;6.00447830432458e-09!GO:0000398;nuclear mRNA splicing, via spliceosome;7.10123620085695e-09!GO:0000375;RNA splicing, via transesterification reactions;7.10123620085695e-09!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;7.10123620085695e-09!GO:0009141;nucleoside triphosphate metabolic process;9.34601057770481e-09!GO:0009142;nucleoside triphosphate biosynthetic process;9.55223980274655e-09!GO:0009201;ribonucleoside triphosphate biosynthetic process;9.55223980274655e-09!GO:0006084;acetyl-CoA metabolic process;1.05767781081236e-08!GO:0009150;purine ribonucleotide metabolic process;1.22269903579879e-08!GO:0009259;ribonucleotide metabolic process;1.26031401334818e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.34193068411947e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.34193068411947e-08!GO:0006099;tricarboxylic acid cycle;1.35490854957707e-08!GO:0046356;acetyl-CoA catabolic process;1.35490854957707e-08!GO:0006163;purine nucleotide metabolic process;1.35576883435005e-08!GO:0005773;vacuole;1.72374227179837e-08!GO:0008654;phospholipid biosynthetic process;1.84083733519742e-08!GO:0008610;lipid biosynthetic process;3.61794484426604e-08!GO:0017076;purine nucleotide binding;3.87013842981054e-08!GO:0006888;ER to Golgi vesicle-mediated transport;4.49133997277298e-08!GO:0007005;mitochondrion organization and biogenesis;4.96864536552202e-08!GO:0046034;ATP metabolic process;5.65198837371089e-08!GO:0003712;transcription cofactor activity;6.14751185762324e-08!GO:0048523;negative regulation of cellular process;7.16119538823244e-08!GO:0009152;purine ribonucleotide biosynthetic process;8.01822911513498e-08!GO:0006461;protein complex assembly;8.82032136491264e-08!GO:0019829;cation-transporting ATPase activity;9.00956331944517e-08!GO:0009108;coenzyme biosynthetic process;9.01792855921436e-08!GO:0006164;purine nucleotide biosynthetic process;9.05504173735834e-08!GO:0006754;ATP biosynthetic process;1.01653796474295e-07!GO:0006753;nucleoside phosphate metabolic process;1.01653796474295e-07!GO:0006752;group transfer coenzyme metabolic process;1.50696876800537e-07!GO:0015078;hydrogen ion transmembrane transporter activity;1.50743098433965e-07!GO:0043412;biopolymer modification;1.59079159738584e-07!GO:0009260;ribonucleotide biosynthetic process;1.84273499464974e-07!GO:0005635;nuclear envelope;1.85969932488513e-07!GO:0019867;outer membrane;1.97056766766849e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.02430002941739e-07!GO:0044255;cellular lipid metabolic process;2.19169558616412e-07!GO:0006118;electron transport;2.48179835286081e-07!GO:0016023;cytoplasmic membrane-bound vesicle;2.75835542428605e-07!GO:0031988;membrane-bound vesicle;2.86600045254365e-07!GO:0031968;organelle outer membrane;2.93955199912848e-07!GO:0019787;small conjugating protein ligase activity;2.93955199912848e-07!GO:0008639;small protein conjugating enzyme activity;2.93955199912848e-07!GO:0000323;lytic vacuole;2.97771000886867e-07!GO:0005764;lysosome;2.97771000886867e-07!GO:0016887;ATPase activity;3.00028971943582e-07!GO:0044431;Golgi apparatus part;3.00185466313606e-07!GO:0048475;coated membrane;3.13777328854759e-07!GO:0030117;membrane coat;3.13777328854759e-07!GO:0016604;nuclear body;3.47769810778206e-07!GO:0032553;ribonucleotide binding;3.68035937915164e-07!GO:0032555;purine ribonucleotide binding;3.68035937915164e-07!GO:0030120;vesicle coat;4.05481066124607e-07!GO:0030662;coated vesicle membrane;4.05481066124607e-07!GO:0042254;ribosome biogenesis and assembly;4.22552837342057e-07!GO:0004842;ubiquitin-protein ligase activity;4.93961778838723e-07!GO:0042623;ATPase activity, coupled;5.23467953326672e-07!GO:0008361;regulation of cell size;5.32985024772265e-07!GO:0016049;cell growth;5.32985024772265e-07!GO:0006464;protein modification process;5.34627560478133e-07!GO:0006913;nucleocytoplasmic transport;1.01095958766557e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.06111022993994e-06!GO:0048519;negative regulation of biological process;1.11021473898708e-06!GO:0005798;Golgi-associated vesicle;1.29419768993178e-06!GO:0017038;protein import;1.30096351276291e-06!GO:0006399;tRNA metabolic process;1.40143359052436e-06!GO:0005741;mitochondrial outer membrane;1.40834566636364e-06!GO:0005770;late endosome;1.56997159752296e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.62550155540383e-06!GO:0051169;nuclear transport;1.62661884914891e-06!GO:0031965;nuclear membrane;1.74091351718361e-06!GO:0031982;vesicle;1.81554560190426e-06!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.99595058086423e-06!GO:0016070;RNA metabolic process;1.99640988654755e-06!GO:0031410;cytoplasmic vesicle;2.05181396642788e-06!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;2.05181396642788e-06!GO:0003714;transcription corepressor activity;2.18564830602649e-06!GO:0045259;proton-transporting ATP synthase complex;2.36063876422665e-06!GO:0030133;transport vesicle;2.41323969624238e-06!GO:0003676;nucleic acid binding;2.48422607599465e-06!GO:0044440;endosomal part;2.58939203785815e-06!GO:0010008;endosome membrane;2.58939203785815e-06!GO:0001558;regulation of cell growth;2.91046322495126e-06!GO:0016881;acid-amino acid ligase activity;3.26816714448484e-06!GO:0016853;isomerase activity;3.52112153708161e-06!GO:0006629;lipid metabolic process;3.69470191846264e-06!GO:0051246;regulation of protein metabolic process;4.16604974130552e-06!GO:0043067;regulation of programmed cell death;4.31577141577061e-06!GO:0016607;nuclear speck;5.20647317675048e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;5.68092573017857e-06!GO:0004812;aminoacyl-tRNA ligase activity;5.68092573017857e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;5.68092573017857e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;5.79656661873875e-06!GO:0003924;GTPase activity;5.82323545078905e-06!GO:0050662;coenzyme binding;5.87039126165498e-06!GO:0042981;regulation of apoptosis;6.10554336445634e-06!GO:0030532;small nuclear ribonucleoprotein complex;6.31628432278051e-06!GO:0045454;cell redox homeostasis;6.34345504991112e-06!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;6.49925665636264e-06!GO:0043069;negative regulation of programmed cell death;7.30851802501652e-06!GO:0031252;leading edge;7.30851802501652e-06!GO:0051789;response to protein stimulus;8.05075778087933e-06!GO:0006986;response to unfolded protein;8.05075778087933e-06!GO:0009117;nucleotide metabolic process;8.92223943882791e-06!GO:0046474;glycerophospholipid biosynthetic process;9.11479610061719e-06!GO:0043038;amino acid activation;9.64705185684638e-06!GO:0006418;tRNA aminoacylation for protein translation;9.64705185684638e-06!GO:0043039;tRNA aminoacylation;9.64705185684638e-06!GO:0005762;mitochondrial large ribosomal subunit;1.12132054723502e-05!GO:0000315;organellar large ribosomal subunit;1.12132054723502e-05!GO:0032787;monocarboxylic acid metabolic process;1.17269474280194e-05!GO:0043066;negative regulation of apoptosis;1.24237908299465e-05!GO:0005791;rough endoplasmic reticulum;1.315789187733e-05!GO:0065002;intracellular protein transport across a membrane;1.80574662789331e-05!GO:0043687;post-translational protein modification;1.89747124203263e-05!GO:0005839;proteasome core complex (sensu Eukaryota);1.90201272272355e-05!GO:0030554;adenyl nucleotide binding;2.1048437528406e-05!GO:0019843;rRNA binding;2.2614891428258e-05!GO:0006259;DNA metabolic process;2.34368456014265e-05!GO:0048037;cofactor binding;2.47716032003296e-05!GO:0006066;alcohol metabolic process;2.81930997647429e-05!GO:0006613;cotranslational protein targeting to membrane;2.86068886282227e-05!GO:0045786;negative regulation of progression through cell cycle;3.32103547504532e-05!GO:0005525;GTP binding;3.78293806557053e-05!GO:0005048;signal sequence binding;3.93015682224864e-05!GO:0000139;Golgi membrane;4.00629648855701e-05!GO:0044453;nuclear membrane part;4.17731460384407e-05!GO:0032446;protein modification by small protein conjugation;4.42911468387614e-05!GO:0000151;ubiquitin ligase complex;4.62715807466048e-05!GO:0016564;transcription repressor activity;4.82015245282121e-05!GO:0016567;protein ubiquitination;4.82932363667051e-05!GO:0006366;transcription from RNA polymerase II promoter;5.08333005408759e-05!GO:0030867;rough endoplasmic reticulum membrane;5.83878344419611e-05!GO:0016787;hydrolase activity;6.07456992069723e-05!GO:0005975;carbohydrate metabolic process;6.39421868024433e-05!GO:0006916;anti-apoptosis;6.51280730079317e-05!GO:0040008;regulation of growth;6.88274252005949e-05!GO:0004298;threonine endopeptidase activity;8.07930793062875e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;8.57284884905723e-05!GO:0008026;ATP-dependent helicase activity;8.71451103031391e-05!GO:0006979;response to oxidative stress;9.2073322417225e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;9.23205842422684e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;9.53316019592766e-05!GO:0015399;primary active transmembrane transporter activity;9.53316019592766e-05!GO:0046467;membrane lipid biosynthetic process;9.53316019592766e-05!GO:0016859;cis-trans isomerase activity;9.75140174004254e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.000100424087629191!GO:0016126;sterol biosynthetic process;0.000113450534562467!GO:0051287;NAD binding;0.000113450534562467!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.000118224128624091!GO:0033116;ER-Golgi intermediate compartment membrane;0.000134777891180951!GO:0032559;adenyl ribonucleotide binding;0.000135118448203507!GO:0000314;organellar small ribosomal subunit;0.000136623779609759!GO:0005763;mitochondrial small ribosomal subunit;0.000136623779609759!GO:0000245;spliceosome assembly;0.000139091579133378!GO:0005905;coated pit;0.000140204306394146!GO:0006974;response to DNA damage stimulus;0.000143237079292044!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000161828614413845!GO:0030036;actin cytoskeleton organization and biogenesis;0.000185474554532752!GO:0006364;rRNA processing;0.000185745759626535!GO:0043284;biopolymer biosynthetic process;0.000188957279549655!GO:0032561;guanyl ribonucleotide binding;0.000191604694337539!GO:0019001;guanyl nucleotide binding;0.000191604694337539!GO:0005524;ATP binding;0.000192363301904795!GO:0005667;transcription factor complex;0.000233057369092567!GO:0019318;hexose metabolic process;0.000233693701122575!GO:0046489;phosphoinositide biosynthetic process;0.000235421265400121!GO:0004576;oligosaccharyl transferase activity;0.00028688152624027!GO:0016072;rRNA metabolic process;0.000292685605047983!GO:0051170;nuclear import;0.000304692938826288!GO:0006818;hydrogen transport;0.000316396029983228!GO:0006631;fatty acid metabolic process;0.000347461495686113!GO:0005996;monosaccharide metabolic process;0.000361432135508793!GO:0015992;proton transport;0.000361738470458813!GO:0006612;protein targeting to membrane;0.000375135186076681!GO:0016614;oxidoreductase activity, acting on CH-OH group of donors;0.000398790194283284!GO:0006606;protein import into nucleus;0.00039913588622061!GO:0009719;response to endogenous stimulus;0.000404361928030913!GO:0006839;mitochondrial transport;0.000416096685292403!GO:0003697;single-stranded DNA binding;0.000442664067063632!GO:0006790;sulfur metabolic process;0.000451578244385798!GO:0006635;fatty acid beta-oxidation;0.000455934876566888!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000462515710939587!GO:0007050;cell cycle arrest;0.000495155147964002!GO:0006650;glycerophospholipid metabolic process;0.000505331226854698!GO:0008250;oligosaccharyl transferase complex;0.000517341912626736!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000532195487459093!GO:0046930;pore complex;0.000548963377684965!GO:0022890;inorganic cation transmembrane transporter activity;0.000549178694331793!GO:0043021;ribonucleoprotein binding;0.000564729733824933!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000592043485040499!GO:0006695;cholesterol biosynthetic process;0.000628287986259415!GO:0005643;nuclear pore;0.000681484278123013!GO:0043566;structure-specific DNA binding;0.000684379400573081!GO:0051540;metal cluster binding;0.000695010935601472!GO:0051536;iron-sulfur cluster binding;0.000695010935601472!GO:0030663;COPI coated vesicle membrane;0.000698839067029907!GO:0030126;COPI vesicle coat;0.000698839067029907!GO:0016044;membrane organization and biogenesis;0.00074970553124148!GO:0051920;peroxiredoxin activity;0.000772133482458291!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000859697640009877!GO:0030137;COPI-coated vesicle;0.000863999073084258!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.000863999073084258!GO:0016125;sterol metabolic process;0.000879613424861978!GO:0006626;protein targeting to mitochondrion;0.000897225551830145!GO:0030029;actin filament-based process;0.000897225551830145!GO:0000074;regulation of progression through cell cycle;0.000915778927875392!GO:0043681;protein import into mitochondrion;0.000915778927875392!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000918400096703232!GO:0043492;ATPase activity, coupled to movement of substances;0.000926552315701862!GO:0051726;regulation of cell cycle;0.000980169044608548!GO:0003724;RNA helicase activity;0.00100240864637767!GO:0031324;negative regulation of cellular metabolic process;0.0010608804298393!GO:0031902;late endosome membrane;0.00107020052322839!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00108952047837865!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00108952047837865!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00108952047837865!GO:0050794;regulation of cellular process;0.00110551898298435!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00111364823352806!GO:0016740;transferase activity;0.00114152058207559!GO:0004386;helicase activity;0.00114152058207559!GO:0005769;early endosome;0.00114773913268448!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0012498911555909!GO:0009165;nucleotide biosynthetic process;0.00127309646491894!GO:0005885;Arp2/3 protein complex;0.00128291209531!GO:0005774;vacuolar membrane;0.00132256993043771!GO:0004177;aminopeptidase activity;0.00139538420092933!GO:0018196;peptidyl-asparagine modification;0.00140808428083108!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00140808428083108!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00157371582787336!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00164687187089253!GO:0015002;heme-copper terminal oxidase activity;0.00164687187089253!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00164687187089253!GO:0004129;cytochrome-c oxidase activity;0.00164687187089253!GO:0043623;cellular protein complex assembly;0.00166033052647887!GO:0006414;translational elongation;0.00177810409004426!GO:0030176;integral to endoplasmic reticulum membrane;0.00178418774348!GO:0051427;hormone receptor binding;0.00186241510313128!GO:0048522;positive regulation of cellular process;0.00188336917064986!GO:0008092;cytoskeletal protein binding;0.00194490943714919!GO:0007243;protein kinase cascade;0.00194564143631338!GO:0005777;peroxisome;0.00196145638899888!GO:0042579;microbody;0.00196145638899888!GO:0006006;glucose metabolic process;0.00199651228968044!GO:0044438;microbody part;0.00202726501039467!GO:0044439;peroxisomal part;0.00202726501039467!GO:0030308;negative regulation of cell growth;0.00203254840179971!GO:0006643;membrane lipid metabolic process;0.00204166276680497!GO:0007040;lysosome organization and biogenesis;0.00206049219062378!GO:0045792;negative regulation of cell size;0.0021811183733872!GO:0019899;enzyme binding;0.00226334124432866!GO:0000096;sulfur amino acid metabolic process;0.00231680338139856!GO:0016779;nucleotidyltransferase activity;0.00232650682107445!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.00241793335188804!GO:0006644;phospholipid metabolic process;0.00248496656165685!GO:0007179;transforming growth factor beta receptor signaling pathway;0.00268956707801137!GO:0050657;nucleic acid transport;0.00281277291936006!GO:0051236;establishment of RNA localization;0.00281277291936006!GO:0050658;RNA transport;0.00281277291936006!GO:0016310;phosphorylation;0.00284213524588201!GO:0006506;GPI anchor biosynthetic process;0.00284571753819569!GO:0006403;RNA localization;0.00292075656718836!GO:0006793;phosphorus metabolic process;0.00294507184025467!GO:0006796;phosphate metabolic process;0.00294507184025467!GO:0003713;transcription coactivator activity;0.00308156758639681!GO:0007006;mitochondrial membrane organization and biogenesis;0.00308670447767265!GO:0006891;intra-Golgi vesicle-mediated transport;0.00316861812090991!GO:0031903;microbody membrane;0.00317063166451162!GO:0005778;peroxisomal membrane;0.00317063166451162!GO:0035257;nuclear hormone receptor binding;0.00324105552368732!GO:0001726;ruffle;0.00326900407088077!GO:0007049;cell cycle;0.00327755789984079!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00364216902290386!GO:0044437;vacuolar part;0.00364992038185601!GO:0035258;steroid hormone receptor binding;0.00372700005885746!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.00373867109094682!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00380846594886943!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00380846594886943!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00382202104928802!GO:0030132;clathrin coat of coated pit;0.00382547563021355!GO:0006281;DNA repair;0.00384943433207284!GO:0009892;negative regulation of metabolic process;0.00394769626423131!GO:0006892;post-Golgi vesicle-mediated transport;0.00394774950685922!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00417688004412711!GO:0048471;perinuclear region of cytoplasm;0.00425770371084508!GO:0030027;lamellipodium;0.00426853621800047!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00434086917874357!GO:0005765;lysosomal membrane;0.00453605910351677!GO:0042158;lipoprotein biosynthetic process;0.00453605910351677!GO:0016860;intramolecular oxidoreductase activity;0.0046760358885373!GO:0048500;signal recognition particle;0.00470515392093488!GO:0046483;heterocycle metabolic process;0.00471159815779158!GO:0006505;GPI anchor metabolic process;0.00471159815779158!GO:0008652;amino acid biosynthetic process;0.00481064041105112!GO:0048487;beta-tubulin binding;0.00481898252904139!GO:0007033;vacuole organization and biogenesis;0.00482098813647982!GO:0050789;regulation of biological process;0.00496055792275791!GO:0016197;endosome transport;0.00541951673892533!GO:0003899;DNA-directed RNA polymerase activity;0.00612625118416095!GO:0045926;negative regulation of growth;0.00648420940008744!GO:0051539;4 iron, 4 sulfur cluster binding;0.00661282947636644!GO:0030384;phosphoinositide metabolic process;0.00675218125714305!GO:0030118;clathrin coat;0.00679905838780233!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00687726297970893!GO:0007178;transmembrane receptor protein serine/threonine kinase signaling pathway;0.00688380286174289!GO:0008203;cholesterol metabolic process;0.00688380286174289!GO:0006497;protein amino acid lipidation;0.00688380286174289!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.00688380286174289!GO:0003729;mRNA binding;0.00693161769371128!GO:0031072;heat shock protein binding;0.00695680985844263!GO:0019395;fatty acid oxidation;0.00729246529148145!GO:0030134;ER to Golgi transport vesicle;0.00730293285698753!GO:0048468;cell development;0.00779646180765424!GO:0006749;glutathione metabolic process;0.00797742303306264!GO:0005586;collagen type III;0.0081228228425079!GO:0005869;dynactin complex;0.00817549203007928!GO:0030145;manganese ion binding;0.0082146477462908!GO:0017166;vinculin binding;0.00824050590886723!GO:0006509;membrane protein ectodomain proteolysis;0.00825345747930654!GO:0033619;membrane protein proteolysis;0.00825345747930654!GO:0030658;transport vesicle membrane;0.00835544119483581!GO:0006740;NADPH regeneration;0.00837439181240861!GO:0006098;pentose-phosphate shunt;0.00837439181240861!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00896189662422152!GO:0016903;oxidoreductase activity, acting on the aldehyde or oxo group of donors;0.00930747486568488!GO:0009967;positive regulation of signal transduction;0.00931477266775301!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00957053446455917!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00964759596807571!GO:0045047;protein targeting to ER;0.00964759596807571!GO:0043488;regulation of mRNA stability;0.00996537073234876!GO:0043487;regulation of RNA stability;0.00996537073234876!GO:0030127;COPII vesicle coat;0.0102720615373527!GO:0012507;ER to Golgi transport vesicle membrane;0.0102720615373527!GO:0030880;RNA polymerase complex;0.0104208236242187!GO:0045936;negative regulation of phosphate metabolic process;0.0104930771691457!GO:0001527;microfibril;0.0104960661612233!GO:0008186;RNA-dependent ATPase activity;0.0105345278698179!GO:0006383;transcription from RNA polymerase III promoter;0.010873584638158!GO:0006778;porphyrin metabolic process;0.0110249220504245!GO:0033013;tetrapyrrole metabolic process;0.0110249220504245!GO:0043433;negative regulation of transcription factor activity;0.0116472502367825!GO:0046394;carboxylic acid biosynthetic process;0.0119424426059382!GO:0016053;organic acid biosynthetic process;0.0119424426059382!GO:0050811;GABA receptor binding;0.0121536658267623!GO:0006767;water-soluble vitamin metabolic process;0.0121536658267623!GO:0016408;C-acyltransferase activity;0.0121536658267623!GO:0003746;translation elongation factor activity;0.012266992711614!GO:0031901;early endosome membrane;0.0129006796810079!GO:0016646;oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor;0.0133453900891758!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0133657802398522!GO:0008139;nuclear localization sequence binding;0.0138205575213659!GO:0033559;unsaturated fatty acid metabolic process;0.0139158978151091!GO:0006636;unsaturated fatty acid biosynthetic process;0.0139158978151091!GO:0051252;regulation of RNA metabolic process;0.0142944151453728!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0145610623152111!GO:0045045;secretory pathway;0.0147935997637953!GO:0051028;mRNA transport;0.015468165841743!GO:0051128;regulation of cellular component organization and biogenesis;0.0162266486421247!GO:0030503;regulation of cell redox homeostasis;0.0162279792366623!GO:0031406;carboxylic acid binding;0.0162441504277719!GO:0006633;fatty acid biosynthetic process;0.016298105546464!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0163201623081299!GO:0016620;oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor;0.0164538072799043!GO:0016272;prefoldin complex;0.0169054924061502!GO:0006807;nitrogen compound metabolic process;0.0171096797304257!GO:0035035;histone acetyltransferase binding;0.0173891658314462!GO:0000902;cell morphogenesis;0.0174193724645572!GO:0032989;cellular structure morphogenesis;0.0174193724645572!GO:0006693;prostaglandin metabolic process;0.0174193724645572!GO:0006692;prostanoid metabolic process;0.0174193724645572!GO:0004448;isocitrate dehydrogenase activity;0.0174648794831922!GO:0016563;transcription activator activity;0.0174648794831922!GO:0008312;7S RNA binding;0.0178503455703012!GO:0008286;insulin receptor signaling pathway;0.018401439501745!GO:0009081;branched chain family amino acid metabolic process;0.0184407924100824!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0186741285292639!GO:0007160;cell-matrix adhesion;0.0186973936880834!GO:0044420;extracellular matrix part;0.0188038184008333!GO:0000049;tRNA binding;0.019361760996659!GO:0051329;interphase of mitotic cell cycle;0.019795154821392!GO:0006520;amino acid metabolic process;0.0201681674094711!GO:0022408;negative regulation of cell-cell adhesion;0.0202355256671767!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0204342343898433!GO:0000428;DNA-directed RNA polymerase complex;0.0204342343898433!GO:0030660;Golgi-associated vesicle membrane;0.020462280503566!GO:0005583;fibrillar collagen;0.0205350171261433!GO:0048518;positive regulation of biological process;0.0205350171261433!GO:0006739;NADP metabolic process;0.0208250334384842!GO:0000030;mannosyltransferase activity;0.0210892112056443!GO:0046870;cadmium ion binding;0.0211197822307126!GO:0031589;cell-substrate adhesion;0.0212155218230476!GO:0042326;negative regulation of phosphorylation;0.0213957795050423!GO:0006897;endocytosis;0.021729607525615!GO:0010324;membrane invagination;0.021729607525615!GO:0008320;protein transmembrane transporter activity;0.0222140044140925!GO:0046519;sphingoid metabolic process;0.0225200604238497!GO:0003711;transcription elongation regulator activity;0.0226218031999377!GO:0042168;heme metabolic process;0.0227423569017099!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.0228020769624589!GO:0033673;negative regulation of kinase activity;0.0228020769624589!GO:0006469;negative regulation of protein kinase activity;0.0228020769624589!GO:0004004;ATP-dependent RNA helicase activity;0.0229533967849298!GO:0005684;U2-dependent spliceosome;0.0229736468929826!GO:0003857;3-hydroxyacyl-CoA dehydrogenase activity;0.0231564930003227!GO:0006518;peptide metabolic process;0.0233213532578681!GO:0001953;negative regulation of cell-matrix adhesion;0.0235225008844777!GO:0006733;oxidoreduction coenzyme metabolic process;0.0240959339333765!GO:0006595;polyamine metabolic process;0.0241208995575213!GO:0006779;porphyrin biosynthetic process;0.0244642339147337!GO:0033014;tetrapyrrole biosynthetic process;0.0244642339147337!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0251192753983228!GO:0004228;gelatinase A activity;0.0251192753983228!GO:0001955;blood vessel maturation;0.0251192753983228!GO:0051087;chaperone binding;0.0251192753983228!GO:0006007;glucose catabolic process;0.0251771443620738!GO:0006402;mRNA catabolic process;0.025230225796591!GO:0008180;signalosome;0.0252566834273313!GO:0008147;structural constituent of bone;0.0255512972630438!GO:0030041;actin filament polymerization;0.0261735861396701!GO:0016051;carbohydrate biosynthetic process;0.0262015333615014!GO:0005595;collagen type XII;0.0262015333615014!GO:0031418;L-ascorbic acid binding;0.0262218778381925!GO:0016568;chromatin modification;0.0264144038561267!GO:0051348;negative regulation of transferase activity;0.0264144038561267!GO:0004029;aldehyde dehydrogenase (NAD) activity;0.0264199410218314!GO:0003988;acetyl-CoA C-acyltransferase activity;0.026752506351464!GO:0051325;interphase;0.0271343411156688!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.0271343411156688!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.0271343411156688!GO:0031970;organelle envelope lumen;0.0274885695345713!GO:0007034;vacuolar transport;0.0274885695345713!GO:0000097;sulfur amino acid biosynthetic process;0.0274885695345713!GO:0043068;positive regulation of programmed cell death;0.0275554302767988!GO:0030659;cytoplasmic vesicle membrane;0.0277710139810599!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0281182249528564!GO:0006354;RNA elongation;0.0284321186602779!GO:0030119;AP-type membrane coat adaptor complex;0.028677152771502!GO:0006950;response to stress;0.0288511112376481!GO:0009308;amine metabolic process;0.0290499733848633!GO:0005758;mitochondrial intermembrane space;0.0290499733848633!GO:0006769;nicotinamide metabolic process;0.0296590267704006!GO:0008033;tRNA processing;0.0296958577878303!GO:0005520;insulin-like growth factor binding;0.0301143299394031!GO:0043065;positive regulation of apoptosis;0.0301167614438911!GO:0005862;muscle thin filament tropomyosin;0.0302191959480469!GO:0016481;negative regulation of transcription;0.0311695375775291!GO:0030518;steroid hormone receptor signaling pathway;0.0320070210241916!GO:0007264;small GTPase mediated signal transduction;0.03245048129087!GO:0051168;nuclear export;0.0344383599087797!GO:0003779;actin binding;0.0344383599087797!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0344383599087797!GO:0010257;NADH dehydrogenase complex assembly;0.0344383599087797!GO:0033108;mitochondrial respiratory chain complex assembly;0.0344383599087797!GO:0043086;negative regulation of catalytic activity;0.0346822668669588!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0348718484981918!GO:0005801;cis-Golgi network;0.0350234120902!GO:0016721;oxidoreductase activity, acting on superoxide radicals as acceptor;0.0352144292481626!GO:0004784;superoxide dismutase activity;0.0352144292481626!GO:0047115;trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity;0.0356796423228313!GO:0005813;centrosome;0.0357700630581595!GO:0050681;androgen receptor binding;0.0360234554443548!GO:0006325;establishment and/or maintenance of chromatin architecture;0.0365071342125883!GO:0030140;trans-Golgi network transport vesicle;0.0365093733509046!GO:0005507;copper ion binding;0.0365093733509046!GO:0043022;ribosome binding;0.0365175010335713!GO:0006720;isoprenoid metabolic process;0.0369970975538146!GO:0030508;thiol-disulfide exchange intermediate activity;0.037536040692348!GO:0006417;regulation of translation;0.0379959706610657!GO:0000082;G1/S transition of mitotic cell cycle;0.0384124899302374!GO:0000303;response to superoxide;0.0384124899302374!GO:0065004;protein-DNA complex assembly;0.0386084692748495!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0386084692748495!GO:0006672;ceramide metabolic process;0.0397534839095515!GO:0000339;RNA cap binding;0.0398297923135442!GO:0030521;androgen receptor signaling pathway;0.0398333005206295!GO:0048144;fibroblast proliferation;0.0398333005206295!GO:0048145;regulation of fibroblast proliferation;0.0398333005206295!GO:0005832;chaperonin-containing T-complex;0.0399892220619342!GO:0015923;mannosidase activity;0.0402710365148248!GO:0003690;double-stranded DNA binding;0.040457435977801!GO:0022402;cell cycle process;0.0407065696326486!GO:0065009;regulation of a molecular function;0.0407065696326486!GO:0007030;Golgi organization and biogenesis;0.0407419416476237!GO:0031272;regulation of pseudopodium formation;0.0407419416476237!GO:0031269;pseudopodium formation;0.0407419416476237!GO:0031344;regulation of cell projection organization and biogenesis;0.0407419416476237!GO:0031268;pseudopodium organization and biogenesis;0.0407419416476237!GO:0031346;positive regulation of cell projection organization and biogenesis;0.0407419416476237!GO:0031274;positive regulation of pseudopodium formation;0.0407419416476237!GO:0001725;stress fiber;0.0414491079579773!GO:0032432;actin filament bundle;0.0414491079579773!GO:0044264;cellular polysaccharide metabolic process;0.0416863828370314!GO:0016363;nuclear matrix;0.0417208131776008!GO:0008430;selenium binding;0.0421062727637921!GO:0005159;insulin-like growth factor receptor binding;0.0423720755457762!GO:0005581;collagen;0.0443263578057873!GO:0008632;apoptotic program;0.0447149242717913!GO:0032940;secretion by cell;0.0447525193188112!GO:0030131;clathrin adaptor complex;0.0448152877869228!GO:0004300;enoyl-CoA hydratase activity;0.0453085028094441!GO:0008629;induction of apoptosis by intracellular signals;0.0459214290237911!GO:0031529;ruffle organization and biogenesis;0.0463078941616193!GO:0000209;protein polyubiquitination;0.0466956397536308!GO:0015036;disulfide oxidoreductase activity;0.0468235130024859!GO:0003817;complement factor D activity;0.0471123724865458!GO:0009889;regulation of biosynthetic process;0.0483283481853881!GO:0006783;heme biosynthetic process;0.0483738436053031!GO:0005976;polysaccharide metabolic process;0.049017798244622!GO:0030125;clathrin vesicle coat;0.0492963014397303!GO:0030665;clathrin coated vesicle membrane;0.0492963014397303!GO:0031326;regulation of cellular biosynthetic process;0.0494207035845475!GO:0003756;protein disulfide isomerase activity;0.0495559292639918!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0495559292639918!GO:0006352;transcription initiation;0.0495608980794536!GO:0015248;sterol transporter activity;0.0496535085524238 | |||
|sample_id=11475 | |sample_id=11475 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 105: | ||
|sample_tissue= | |sample_tissue= | ||
|top_motifs=RXRA_VDR{dimer}:2.45957886027;GZF1:2.26333883646;ESR1:2.16002827729;NKX2-2,8:2.1257120864;UFEwm:2.11543210444;EBF1:2.1107399591;PAX1,9:2.05993085514;HES1:2.01045080548;IKZF1:1.97942383037;SMAD1..7,9:1.9527721518;TFAP4:1.94962762397;XBP1:1.91675021886;SRF:1.86026581531;ATF6:1.82768378661;TAL1_TCF{3,4,12}:1.79459058473;MAFB:1.75203521901;HIF1A:1.7008239556;GLI1..3:1.63494106248;ZNF238:1.5426498173;AR:1.50802200831;NR3C1:1.50594670901;GCM1,2:1.48885186775;KLF4:1.44903558987;TEAD1:1.41413401143;FOXL1:1.41349841019;ARID5B:1.3257414434;RXR{A,B,G}:1.26921188743;HOX{A5,B5}:1.21543632264;ESRRA:1.2036598752;TFCP2:1.19192809779;TP53:1.13374251494;TFAP2{A,C}:1.07677493727;ZNF423:1.00440641808;NFE2L1:0.987375817938;LHX3,4:0.98706246346;bHLH_family:0.960649341091;NKX3-1:0.958165327059;SPZ1:0.953177920537;MYBL2:0.926518150844;HMGA1,2:0.91875881588;TLX1..3_NFIC{dimer}:0.910426673719;PAX6:0.904607981029;MAZ:0.880535594784;NR6A1:0.837670104422;MTF1:0.817979848718;HMX1:0.815365086981;PAX5:0.814918867603;MTE{core}:0.780574065169;NFATC1..3:0.780156417434;EVI1:0.753654612087;NHLH1,2:0.748025506182;TEF:0.74698958752;ZBTB6:0.729451503628;STAT2,4,6:0.715210655325;GTF2I:0.69696867148;FOXO1,3,4:0.689361489053;NR1H4:0.689115197877;ALX4:0.672529022601;NANOG{mouse}:0.645312987782;GFI1B:0.642482866988;ZNF148:0.639191416121;NKX2-1,4:0.59169307823;DBP:0.54007536302;PATZ1:0.519726912694;HOXA9_MEIS1:0.513329720525;HOX{A6,A7,B6,B7}:0.496960523642;ZIC1..3:0.466883495838;HNF4A_NR2F1,2:0.450821503164;GTF2A1,2:0.434310729165;HOX{A4,D4}:0.412725654793;EN1,2:0.390627842286;TBP:0.382965153897;PPARG:0.376191945338;TFAP2B:0.349585806756;TBX4,5:0.32056086171;HIC1:0.320477814188;GATA4:0.306460548517;HLF:0.275057466126;HSF1,2:0.270544978791;NFIX:0.255356447746;MZF1:0.236084337478;MYFfamily:0.233381404833;NKX3-2:0.224898663062;POU6F1:0.212937102494;RORA:0.174837298494;REST:0.165875487733;FOXP3:0.129084134162;STAT1,3:0.128384150797;MEF2{A,B,C,D}:0.127870321415;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.0762781407292;FOXA2:0.0666878530563;SOX5:0.0564252009415;NFE2L2:0.050551612956;NR5A1,2:0.0491600364981;SREBF1,2:0.0391321434777;SOX17:0.0124399359015;TGIF1:0.0111097423525;HAND1,2:-0.0480689511161;CDC5L:-0.0753068024304;ZNF384:-0.0792523994415;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.094845581857;MED-1{core}:-0.163679695492;PRDM1:-0.17723530856;HNF1A:-0.178640765382;SP1:-0.182068006107;RREB1:-0.203327526431;EP300:-0.204601280951;NFIL3:-0.242292839621;FOXD3:-0.268916179101;ZNF143:-0.301496952215;MYB:-0.301689789541;FOX{D1,D2}:-0.335140270934;ATF4:-0.336988657741;YY1:-0.338300726885;AHR_ARNT_ARNT2:-0.349836327307;CEBPA,B_DDIT3:-0.36190049429;BACH2:-0.380941437255;ELK1,4_GABP{A,B1}:-0.428305268376;CRX:-0.445690516487;NFE2:-0.479078151412;IRF1,2:-0.480403180435;TLX2:-0.508601315758;NRF1:-0.521672146886;XCPE1{core}:-0.526220752358;PAX3,7:-0.537264395166;RFX1:-0.539104261126;FOXM1:-0.55333846827;JUN:-0.570733948509;PAX2:-0.575697668541;NFKB1_REL_RELA:-0.595123116877;SNAI1..3:-0.617455560659;PRRX1,2:-0.625271781021;GFI1:-0.625636980152;GATA6:-0.640080208963;POU3F1..4:-0.644665605037;BREu{core}:-0.657324727552;FOS_FOS{B,L1}_JUN{B,D}:-0.664265227414;AIRE:-0.670336628334;ONECUT1,2:-0.671005393246;ATF2:-0.675682248935;ATF5_CREB3:-0.695211666605;FOSL2:-0.697724026362;RFX2..5_RFXANK_RFXAP:-0.703018829967;CREB1:-0.707680751474;SOX2:-0.712498669159;SPI1:-0.735102472303;ETS1,2:-0.739196694024;RUNX1..3:-0.747747491672;ZFP161:-0.755918351485;ELF1,2,4:-0.767988264969;SPIB:-0.776981709004;LMO2:-0.810584475136;RBPJ:-0.815763033448;NKX6-1,2:-0.826086980312;FOXP1:-0.843447204567;EGR1..3:-0.843984442261;DMAP1_NCOR{1,2}_SMARC:-0.865299829061;FOX{I1,J2}:-0.866580913165;IKZF2:-0.875062396849;STAT5{A,B}:-0.934825477359;IRF7:-0.936023065403;PDX1:-0.995855849473;PAX4:-1.00068936604;ZBTB16:-1.00730959158;NFY{A,B,C}:-1.04524943668;ZEB1:-1.05349278142;FOX{F1,F2,J1}:-1.08516344654;POU5F1:-1.10076459286;MYOD1:-1.14541153829;ADNP_IRX_SIX_ZHX:-1.1476910602;PBX1:-1.1867169811;PITX1..3:-1.22825235656;OCT4_SOX2{dimer}:-1.25342831127;TFDP1:-1.28021287511;CDX1,2,4:-1.29275472234;TOPORS:-1.30410531136;FOXN1:-1.31571105304;BPTF:-1.35230846179;T:-1.35485792853;LEF1_TCF7_TCF7L1,2:-1.45854681001;ALX1:-1.47339987609;PAX8:-1.4858445857;SOX{8,9,10}:-1.49315259959;HBP1_HMGB_SSRP1_UBTF:-1.5010250135;CUX2:-1.51589381886;E2F1..5:-1.5383539469;POU1F1:-1.60440203278;VSX1,2:-1.60801763566;NKX2-3_NKX2-5:-1.63902267617;NANOG:-1.67923918772;FOXQ1:-1.6962434076;POU2F1..3:-2.26159261065 | |top_motifs=RXRA_VDR{dimer}:2.45957886027;GZF1:2.26333883646;ESR1:2.16002827729;NKX2-2,8:2.1257120864;UFEwm:2.11543210444;EBF1:2.1107399591;PAX1,9:2.05993085514;HES1:2.01045080548;IKZF1:1.97942383037;SMAD1..7,9:1.9527721518;TFAP4:1.94962762397;XBP1:1.91675021886;SRF:1.86026581531;ATF6:1.82768378661;TAL1_TCF{3,4,12}:1.79459058473;MAFB:1.75203521901;HIF1A:1.7008239556;GLI1..3:1.63494106248;ZNF238:1.5426498173;AR:1.50802200831;NR3C1:1.50594670901;GCM1,2:1.48885186775;KLF4:1.44903558987;TEAD1:1.41413401143;FOXL1:1.41349841019;ARID5B:1.3257414434;RXR{A,B,G}:1.26921188743;HOX{A5,B5}:1.21543632264;ESRRA:1.2036598752;TFCP2:1.19192809779;TP53:1.13374251494;TFAP2{A,C}:1.07677493727;ZNF423:1.00440641808;NFE2L1:0.987375817938;LHX3,4:0.98706246346;bHLH_family:0.960649341091;NKX3-1:0.958165327059;SPZ1:0.953177920537;MYBL2:0.926518150844;HMGA1,2:0.91875881588;TLX1..3_NFIC{dimer}:0.910426673719;PAX6:0.904607981029;MAZ:0.880535594784;NR6A1:0.837670104422;MTF1:0.817979848718;HMX1:0.815365086981;PAX5:0.814918867603;MTE{core}:0.780574065169;NFATC1..3:0.780156417434;EVI1:0.753654612087;NHLH1,2:0.748025506182;TEF:0.74698958752;ZBTB6:0.729451503628;STAT2,4,6:0.715210655325;GTF2I:0.69696867148;FOXO1,3,4:0.689361489053;NR1H4:0.689115197877;ALX4:0.672529022601;NANOG{mouse}:0.645312987782;GFI1B:0.642482866988;ZNF148:0.639191416121;NKX2-1,4:0.59169307823;DBP:0.54007536302;PATZ1:0.519726912694;HOXA9_MEIS1:0.513329720525;HOX{A6,A7,B6,B7}:0.496960523642;ZIC1..3:0.466883495838;HNF4A_NR2F1,2:0.450821503164;GTF2A1,2:0.434310729165;HOX{A4,D4}:0.412725654793;EN1,2:0.390627842286;TBP:0.382965153897;PPARG:0.376191945338;TFAP2B:0.349585806756;TBX4,5:0.32056086171;HIC1:0.320477814188;GATA4:0.306460548517;HLF:0.275057466126;HSF1,2:0.270544978791;NFIX:0.255356447746;MZF1:0.236084337478;MYFfamily:0.233381404833;NKX3-2:0.224898663062;POU6F1:0.212937102494;RORA:0.174837298494;REST:0.165875487733;FOXP3:0.129084134162;STAT1,3:0.128384150797;MEF2{A,B,C,D}:0.127870321415;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.0762781407292;FOXA2:0.0666878530563;SOX5:0.0564252009415;NFE2L2:0.050551612956;NR5A1,2:0.0491600364981;SREBF1,2:0.0391321434777;SOX17:0.0124399359015;TGIF1:0.0111097423525;HAND1,2:-0.0480689511161;CDC5L:-0.0753068024304;ZNF384:-0.0792523994415;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.094845581857;MED-1{core}:-0.163679695492;PRDM1:-0.17723530856;HNF1A:-0.178640765382;SP1:-0.182068006107;RREB1:-0.203327526431;EP300:-0.204601280951;NFIL3:-0.242292839621;FOXD3:-0.268916179101;ZNF143:-0.301496952215;MYB:-0.301689789541;FOX{D1,D2}:-0.335140270934;ATF4:-0.336988657741;YY1:-0.338300726885;AHR_ARNT_ARNT2:-0.349836327307;CEBPA,B_DDIT3:-0.36190049429;BACH2:-0.380941437255;ELK1,4_GABP{A,B1}:-0.428305268376;CRX:-0.445690516487;NFE2:-0.479078151412;IRF1,2:-0.480403180435;TLX2:-0.508601315758;NRF1:-0.521672146886;XCPE1{core}:-0.526220752358;PAX3,7:-0.537264395166;RFX1:-0.539104261126;FOXM1:-0.55333846827;JUN:-0.570733948509;PAX2:-0.575697668541;NFKB1_REL_RELA:-0.595123116877;SNAI1..3:-0.617455560659;PRRX1,2:-0.625271781021;GFI1:-0.625636980152;GATA6:-0.640080208963;POU3F1..4:-0.644665605037;BREu{core}:-0.657324727552;FOS_FOS{B,L1}_JUN{B,D}:-0.664265227414;AIRE:-0.670336628334;ONECUT1,2:-0.671005393246;ATF2:-0.675682248935;ATF5_CREB3:-0.695211666605;FOSL2:-0.697724026362;RFX2..5_RFXANK_RFXAP:-0.703018829967;CREB1:-0.707680751474;SOX2:-0.712498669159;SPI1:-0.735102472303;ETS1,2:-0.739196694024;RUNX1..3:-0.747747491672;ZFP161:-0.755918351485;ELF1,2,4:-0.767988264969;SPIB:-0.776981709004;LMO2:-0.810584475136;RBPJ:-0.815763033448;NKX6-1,2:-0.826086980312;FOXP1:-0.843447204567;EGR1..3:-0.843984442261;DMAP1_NCOR{1,2}_SMARC:-0.865299829061;FOX{I1,J2}:-0.866580913165;IKZF2:-0.875062396849;STAT5{A,B}:-0.934825477359;IRF7:-0.936023065403;PDX1:-0.995855849473;PAX4:-1.00068936604;ZBTB16:-1.00730959158;NFY{A,B,C}:-1.04524943668;ZEB1:-1.05349278142;FOX{F1,F2,J1}:-1.08516344654;POU5F1:-1.10076459286;MYOD1:-1.14541153829;ADNP_IRX_SIX_ZHX:-1.1476910602;PBX1:-1.1867169811;PITX1..3:-1.22825235656;OCT4_SOX2{dimer}:-1.25342831127;TFDP1:-1.28021287511;CDX1,2,4:-1.29275472234;TOPORS:-1.30410531136;FOXN1:-1.31571105304;BPTF:-1.35230846179;T:-1.35485792853;LEF1_TCF7_TCF7L1,2:-1.45854681001;ALX1:-1.47339987609;PAX8:-1.4858445857;SOX{8,9,10}:-1.49315259959;HBP1_HMGB_SSRP1_UBTF:-1.5010250135;CUX2:-1.51589381886;E2F1..5:-1.5383539469;POU1F1:-1.60440203278;VSX1,2:-1.60801763566;NKX2-3_NKX2-5:-1.63902267617;NANOG:-1.67923918772;FOXQ1:-1.6962434076;POU2F1..3:-2.26159261065 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11475-119C8;search_select_hide=table117:FF:11475-119C8 | |||
}} | }} | ||
Latest revision as of 18:03, 4 June 2020
| Name: | Adipocyte - omental, donor3 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12068 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| RNA-Seq Accession numbers | ||||||||||||||||||||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12068
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12068
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.856 |
| 10 | 10 | 0.842 |
| 100 | 100 | 0.7 |
| 101 | 101 | 0.267 |
| 102 | 102 | 0.0512 |
| 103 | 103 | 0.602 |
| 104 | 104 | 0.768 |
| 105 | 105 | 0.186 |
| 106 | 106 | 0.182 |
| 107 | 107 | 0.111 |
| 108 | 108 | 0.327 |
| 109 | 109 | 0.638 |
| 11 | 11 | 0.649 |
| 110 | 110 | 0.614 |
| 111 | 111 | 0.66 |
| 112 | 112 | 0.207 |
| 113 | 113 | 0.723 |
| 114 | 114 | 0.518 |
| 115 | 115 | 0.00808 |
| 116 | 116 | 0.0649 |
| 117 | 117 | 0.605 |
| 118 | 118 | 0.564 |
| 119 | 119 | 0.547 |
| 12 | 12 | 0.728 |
| 120 | 120 | 0.673 |
| 121 | 121 | 0.657 |
| 122 | 122 | 0.36 |
| 123 | 123 | 0.0599 |
| 124 | 124 | 0.927 |
| 125 | 125 | 0.0573 |
| 126 | 126 | 0.783 |
| 127 | 127 | 0.41 |
| 128 | 128 | 0.231 |
| 129 | 129 | 0.492 |
| 13 | 13 | 0.997 |
| 130 | 130 | 0.885 |
| 131 | 131 | 0.893 |
| 132 | 132 | 0.39 |
| 133 | 133 | 0.447 |
| 134 | 134 | 0.456 |
| 135 | 135 | 0.691 |
| 136 | 136 | 0.234 |
| 137 | 137 | 0.406 |
| 138 | 138 | 0.7 |
| 139 | 139 | 0.425 |
| 14 | 14 | 0.458 |
| 140 | 140 | 0.084 |
| 141 | 141 | 0.611 |
| 142 | 142 | 0.6 |
| 143 | 143 | 0.858 |
| 144 | 144 | 0.903 |
| 145 | 145 | 0.279 |
| 146 | 146 | 0.96 |
| 147 | 147 | 0.319 |
| 148 | 148 | 0.562 |
| 149 | 149 | 1.47989e-4 |
| 15 | 15 | 0.688 |
| 150 | 150 | 0.674 |
| 151 | 151 | 0.785 |
| 152 | 152 | 0.0845 |
| 153 | 153 | 0.761 |
| 154 | 154 | 0.338 |
| 155 | 155 | 0.0497 |
| 156 | 156 | 0.168 |
| 157 | 157 | 0.968 |
| 158 | 158 | 0.0376 |
| 159 | 159 | 0.754 |
| 16 | 16 | 0.00896 |
| 160 | 160 | 0.37 |
| 161 | 161 | 0.557 |
| 162 | 162 | 0.583 |
| 163 | 163 | 0.474 |
| 164 | 164 | 0.192 |
| 165 | 165 | 0.491 |
| 166 | 166 | 0.0916 |
| 167 | 167 | 0.316 |
| 168 | 168 | 0.749 |
| 169 | 169 | 0.018 |
| 17 | 17 | 0.469 |
| 18 | 18 | 0.385 |
| 19 | 19 | 0.00202 |
| 2 | 2 | 0.128 |
| 20 | 20 | 0.264 |
| 21 | 21 | 0.671 |
| 22 | 22 | 0.0504 |
| 23 | 23 | 0.12 |
| 24 | 24 | 0.403 |
| 25 | 25 | 0.429 |
| 26 | 26 | 0.94 |
| 27 | 27 | 0.275 |
| 28 | 28 | 0.152 |
| 29 | 29 | 0.781 |
| 3 | 3 | 0.772 |
| 30 | 30 | 0.155 |
| 31 | 31 | 0.335 |
| 32 | 32 | 9.69114e-15 |
| 33 | 33 | 0.661 |
| 34 | 34 | 0.596 |
| 35 | 35 | 0.566 |
| 36 | 36 | 0.0983 |
| 37 | 37 | 0.117 |
| 38 | 38 | 0.982 |
| 39 | 39 | 0.108 |
| 4 | 4 | 0.74 |
| 40 | 40 | 0.8 |
| 41 | 41 | 0.84 |
| 42 | 42 | 0.21 |
| 43 | 43 | 0.274 |
| 44 | 44 | 0.233 |
| 45 | 45 | 0.655 |
| 46 | 46 | 0.889 |
| 47 | 47 | 0.723 |
| 48 | 48 | 0.946 |
| 49 | 49 | 0.876 |
| 5 | 5 | 0.636 |
| 50 | 50 | 0.565 |
| 51 | 51 | 0.981 |
| 52 | 52 | 0.39 |
| 53 | 53 | 0.181 |
| 54 | 54 | 0.953 |
| 55 | 55 | 0.394 |
| 56 | 56 | 0.467 |
| 57 | 57 | 0.966 |
| 58 | 58 | 0.876 |
| 59 | 59 | 0.0761 |
| 6 | 6 | 0.721 |
| 60 | 60 | 0.348 |
| 61 | 61 | 0.556 |
| 62 | 62 | 0.761 |
| 63 | 63 | 0.313 |
| 64 | 64 | 0.865 |
| 65 | 65 | 0.176 |
| 66 | 66 | 0.0427 |
| 67 | 67 | 0.452 |
| 68 | 68 | 0.48 |
| 69 | 69 | 0.705 |
| 7 | 7 | 0.857 |
| 70 | 70 | 0.895 |
| 71 | 71 | 0.465 |
| 72 | 72 | 0.28 |
| 73 | 73 | 0.0304 |
| 74 | 74 | 0.623 |
| 75 | 75 | 0.776 |
| 76 | 76 | 0.494 |
| 77 | 77 | 0.00319 |
| 78 | 78 | 0.914 |
| 79 | 79 | 0.0541 |
| 8 | 8 | 0.42 |
| 80 | 80 | 0.456 |
| 81 | 81 | 0.469 |
| 82 | 82 | 0.307 |
| 83 | 83 | 0.483 |
| 84 | 84 | 0.21 |
| 85 | 85 | 0.00918 |
| 86 | 86 | 0.372 |
| 87 | 87 | 0.194 |
| 88 | 88 | 0.773 |
| 89 | 89 | 0.114 |
| 9 | 9 | 0.445 |
| 90 | 90 | 0.936 |
| 91 | 91 | 0.456 |
| 92 | 92 | 0.116 |
| 93 | 93 | 0.589 |
| 94 | 94 | 0.594 |
| 95 | 95 | 0.734 |
| 96 | 96 | 0.894 |
| 97 | 97 | 0.368 |
| 98 | 98 | 0.841 |
| 99 | 99 | 0.0233 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12068
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000039 human adipocyte of omentum tissue sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000325 (stuff accumulating cell)
0000255 (eukaryotic cell)
0000136 (fat cell)
0002615 (adipocyte of omentum tissue)
UBERON: Anatomy
0000468 (multi-cellular organism)
0003688 (omentum)
0002100 (trunk)
0002384 (connective tissue)
0000479 (tissue)
0000064 (organ part)
0000466 (immaterial anatomical entity)
0000062 (organ)
0000475 (organism subdivision)
0004120 (mesoderm-derived structure)
0004457 (cavity lining)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000063 (organ segment)
0004923 (organ component layer)
0002553 (anatomical cavity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0009569 (subdivision of trunk)
0002323 (body cavity)
0000042 (serous membrane)
0000464 (anatomical space)
0004458 (body cavity or lining)
0010317 (germ layer / neural crest derived structure)
0002417 (abdominal segment of trunk)
0002358 (peritoneum)
0000916 (abdomen)
0003684 (abdominal cavity)
0001178 (visceral peritoneum)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000039 (human adipocyte of omentum tissue sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
