FF:11565-120D8: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet= | |DRA_sample_Accession=CAGE@SAMD00004690 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00004690 | ||
|accession_numbers=CAGE;DRX008332;DRR009204;DRZ000629;DRZ002014;DRZ011979;DRZ013364 | |||
|accession_numbers_RNASeq=sRNA-Seq;DRX037131;DRR041497;DRZ007139 | |||
|ancestors_in_anatomy_facet= | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0000151,CL:0002371,CL:0000766,CL:0002274,CL:0000219,CL:0000163,CL:0000457,CL:0000738,CL:0000255,CL:0000097 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000260,FF:0000261 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 44: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Mast%2520cell%252c%2520donor2.CNhs12594.11565-120D8.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Mast%2520cell%252c%2520donor2.CNhs12594.11565-120D8.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Mast%2520cell%252c%2520donor2.CNhs12594.11565-120D8.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Mast%2520cell%252c%2520donor2.CNhs12594.11565-120D8.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Mast%2520cell%252c%2520donor2.CNhs12594.11565-120D8.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11565-120D8 | |id=FF:11565-120D8 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000210;;FF:0000261 | ||
|is_obsolete= | |||
|library_id=CNhs12594 | |||
|library_id_phase_based=2:CNhs12594 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11565 | |||
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10009.GCCAAT.11565 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11565 | |||
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10009.GCCAAT.11565 | |||
|name=Mast cell, donor2 | |name=Mast cell, donor2 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 65: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12594,LSID912,release011,COMPLETED | |profile_hcage=CNhs12594,LSID912,release011,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=SRhi10009,,, | |profile_srnaseq=SRhi10009,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=120 | |rna_box=120 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 56: | Line 82: | ||
|rna_tube_id=120D8 | |rna_tube_id=120D8 | ||
|rna_weight_ug=8.67744 | |rna_weight_ug=8.67744 | ||
|rnaseq_library_id=SRhi10009.GCCAAT | |||
|sample_age=76 | |sample_age=76 | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 97: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition=control, untreated cells | |sample_experimental_condition=control, untreated cells | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.59424071298258e-226!GO:0043227;membrane-bound organelle;1.64469930523141e-189!GO:0043231;intracellular membrane-bound organelle;3.15402304593814e-189!GO:0043226;organelle;6.89061207971125e-186!GO:0043229;intracellular organelle;2.98200482514491e-185!GO:0005737;cytoplasm;5.40539758600109e-137!GO:0005634;nucleus;1.0014158134473e-104!GO:0043170;macromolecule metabolic process;4.12860845576493e-99!GO:0044422;organelle part;5.34174036377489e-97!GO:0044446;intracellular organelle part;2.65432868722431e-95!GO:0044238;primary metabolic process;1.00798757122661e-92!GO:0044237;cellular metabolic process;6.46568695614955e-91!GO:0044444;cytoplasmic part;1.19175270523713e-85!GO:0005515;protein binding;1.40791817683698e-79!GO:0043283;biopolymer metabolic process;2.67099644764209e-74!GO:0010467;gene expression;3.32397280436358e-65!GO:0032991;macromolecular complex;4.16849728767299e-65!GO:0044428;nuclear part;2.5312335887036e-62!GO:0003723;RNA binding;5.3349052778178e-61!GO:0030529;ribonucleoprotein complex;1.92685717435349e-57!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;5.34096427177493e-57!GO:0043233;organelle lumen;4.27213656038986e-50!GO:0031974;membrane-enclosed lumen;4.27213656038986e-50!GO:0003676;nucleic acid binding;1.06611993621983e-45!GO:0033036;macromolecule localization;1.23185480227822e-45!GO:0015031;protein transport;1.01824836756074e-44!GO:0019538;protein metabolic process;1.24429913929161e-44!GO:0045184;establishment of protein localization;7.97705297250135e-43!GO:0016070;RNA metabolic process;5.15557121115292e-42!GO:0008104;protein localization;5.60996000211171e-42!GO:0044267;cellular protein metabolic process;8.50426290852592e-42!GO:0044260;cellular macromolecule metabolic process;9.65863580076225e-41!GO:0031981;nuclear lumen;6.4967953306745e-40!GO:0006396;RNA processing;2.20447469479612e-39!GO:0016043;cellular component organization and biogenesis;2.2809110924116e-38!GO:0016071;mRNA metabolic process;8.34249555822421e-38!GO:0008380;RNA splicing;3.5504479630033e-34!GO:0031090;organelle membrane;1.00328432729992e-33!GO:0046907;intracellular transport;2.24970561668021e-33!GO:0006412;translation;3.84568615976986e-33!GO:0005739;mitochondrion;9.28206795761259e-33!GO:0043234;protein complex;5.31150893877631e-32!GO:0006397;mRNA processing;1.73968922964728e-31!GO:0050794;regulation of cellular process;3.59199302619221e-31!GO:0005829;cytosol;1.07324954296702e-29!GO:0005840;ribosome;3.35608156111446e-29!GO:0006886;intracellular protein transport;1.51493352943266e-28!GO:0006996;organelle organization and biogenesis;1.81034346918398e-27!GO:0005654;nucleoplasm;2.49303307110659e-26!GO:0009059;macromolecule biosynthetic process;8.86548897135423e-26!GO:0008134;transcription factor binding;2.08149165521873e-25!GO:0065003;macromolecular complex assembly;2.51316964963182e-25!GO:0031967;organelle envelope;5.96480953116931e-25!GO:0031975;envelope;9.61216897028343e-25!GO:0003735;structural constituent of ribosome;1.0904198368002e-24!GO:0000166;nucleotide binding;1.50081759482282e-24!GO:0005681;spliceosome;1.91440047513886e-24!GO:0006259;DNA metabolic process;2.64850016080501e-24!GO:0050789;regulation of biological process;4.77008759430652e-24!GO:0051649;establishment of cellular localization;1.41921891885642e-23!GO:0033279;ribosomal subunit;2.77049469071059e-23!GO:0051641;cellular localization;4.96481753780073e-23!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.7639110274499e-22!GO:0022607;cellular component assembly;2.12436341770026e-22!GO:0019222;regulation of metabolic process;2.76806626644037e-22!GO:0044429;mitochondrial part;1.16505891646341e-21!GO:0044451;nucleoplasm part;2.35910473282042e-21!GO:0009058;biosynthetic process;2.83273171682636e-21!GO:0043412;biopolymer modification;2.83273171682636e-21!GO:0022613;ribonucleoprotein complex biogenesis and assembly;5.59106605821774e-21!GO:0044249;cellular biosynthetic process;1.30012484280133e-20!GO:0006464;protein modification process;2.39372896517122e-19!GO:0043687;post-translational protein modification;3.63871229170815e-19!GO:0006512;ubiquitin cycle;5.05546535173179e-19!GO:0044445;cytosolic part;5.83105420228938e-19!GO:0031323;regulation of cellular metabolic process;9.32343669504675e-19!GO:0032553;ribonucleotide binding;2.36908681931321e-18!GO:0032555;purine ribonucleotide binding;2.36908681931321e-18!GO:0048770;pigment granule;4.01943893270383e-18!GO:0042470;melanosome;4.01943893270383e-18!GO:0043228;non-membrane-bound organelle;4.07618076302351e-18!GO:0043232;intracellular non-membrane-bound organelle;4.07618076302351e-18!GO:0006350;transcription;6.18578869589542e-18!GO:0065007;biological regulation;1.4247180353463e-17!GO:0017111;nucleoside-triphosphatase activity;3.02018469242128e-17!GO:0003712;transcription cofactor activity;3.05683122699033e-17!GO:0016462;pyrophosphatase activity;3.44167483247797e-17!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;4.55564299576419e-17!GO:0010468;regulation of gene expression;4.55564299576419e-17!GO:0016817;hydrolase activity, acting on acid anhydrides;5.30169764253603e-17!GO:0048523;negative regulation of cellular process;7.626818112501e-17!GO:0017076;purine nucleotide binding;8.39193788648348e-17!GO:0012501;programmed cell death;1.07159725400716e-16!GO:0006915;apoptosis;1.66176556795806e-16!GO:0006366;transcription from RNA polymerase II promoter;4.39055224135522e-16!GO:0005740;mitochondrial envelope;4.44519167986544e-16!GO:0008219;cell death;5.74310100499927e-16!GO:0016265;death;5.74310100499927e-16!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;6.95523120723689e-16!GO:0016192;vesicle-mediated transport;8.03513441884603e-16!GO:0032774;RNA biosynthetic process;9.5835851371838e-16!GO:0051603;proteolysis involved in cellular protein catabolic process;1.01507606446362e-15!GO:0006351;transcription, DNA-dependent;1.20691774179407e-15!GO:0019941;modification-dependent protein catabolic process;1.56901397491326e-15!GO:0043632;modification-dependent macromolecule catabolic process;1.56901397491326e-15!GO:0006511;ubiquitin-dependent protein catabolic process;1.60585007134605e-15!GO:0048519;negative regulation of biological process;1.89638948646272e-15!GO:0044257;cellular protein catabolic process;1.90345206466849e-15!GO:0022618;protein-RNA complex assembly;2.66867622351322e-15!GO:0031966;mitochondrial membrane;4.2351262026445e-15!GO:0006325;establishment and/or maintenance of chromatin architecture;4.64877818430449e-15!GO:0012505;endomembrane system;5.91398865978443e-15!GO:0005794;Golgi apparatus;6.61370667446669e-15!GO:0019866;organelle inner membrane;1.00760850952438e-14!GO:0016874;ligase activity;1.59283532542074e-14!GO:0006605;protein targeting;2.48448632533516e-14!GO:0007049;cell cycle;2.76536124274125e-14!GO:0045449;regulation of transcription;2.94960483503019e-14!GO:0006323;DNA packaging;3.10503050863985e-14!GO:0044265;cellular macromolecule catabolic process;3.30639305996294e-14!GO:0006119;oxidative phosphorylation;4.13361602295529e-14!GO:0016604;nuclear body;7.89758971248487e-14!GO:0006793;phosphorus metabolic process;8.42461712163362e-14!GO:0006796;phosphate metabolic process;8.42461712163362e-14!GO:0006355;regulation of transcription, DNA-dependent;2.23387796135004e-13!GO:0043285;biopolymer catabolic process;2.28223840621492e-13!GO:0005524;ATP binding;3.10585952792735e-13!GO:0051276;chromosome organization and biogenesis;3.71243707929605e-13!GO:0005743;mitochondrial inner membrane;5.10920938097567e-13!GO:0005730;nucleolus;5.37006314922621e-13!GO:0006457;protein folding;7.98276818438024e-13!GO:0032559;adenyl ribonucleotide binding;1.07119019142791e-12!GO:0015934;large ribosomal subunit;1.21845390778329e-12!GO:0016568;chromatin modification;1.32869802901746e-12!GO:0016607;nuclear speck;1.76350204907567e-12!GO:0008270;zinc ion binding;2.6043162875919e-12!GO:0008135;translation factor activity, nucleic acid binding;2.92455565013985e-12!GO:0007242;intracellular signaling cascade;4.83917005690231e-12!GO:0006913;nucleocytoplasmic transport;5.58637373641254e-12!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);5.84116620873007e-12!GO:0007243;protein kinase cascade;6.20240359372068e-12!GO:0051169;nuclear transport;9.50457832411708e-12!GO:0030163;protein catabolic process;1.2443188217145e-11!GO:0016310;phosphorylation;1.40949718589908e-11!GO:0015935;small ribosomal subunit;1.72286226975378e-11!GO:0044455;mitochondrial membrane part;2.2064950078604e-11!GO:0006974;response to DNA damage stimulus;2.31638134792937e-11!GO:0048193;Golgi vesicle transport;2.64121311775877e-11!GO:0030554;adenyl nucleotide binding;3.06117549133541e-11!GO:0016563;transcription activator activity;3.10022446710691e-11!GO:0000398;nuclear mRNA splicing, via spliceosome;3.6478323061353e-11!GO:0000375;RNA splicing, via transesterification reactions;3.6478323061353e-11!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;3.6478323061353e-11!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);5.10977543864473e-11!GO:0003713;transcription coactivator activity;1.01492994833881e-10!GO:0003677;DNA binding;1.36278368909832e-10!GO:0007264;small GTPase mediated signal transduction;1.44920113390791e-10!GO:0009057;macromolecule catabolic process;1.88174999913028e-10!GO:0005768;endosome;2.39053535243736e-10!GO:0016564;transcription repressor activity;2.61179567261364e-10!GO:0031324;negative regulation of cellular metabolic process;4.92271589921727e-10!GO:0006446;regulation of translational initiation;5.51915872351735e-10!GO:0006413;translational initiation;6.34952815007714e-10!GO:0005635;nuclear envelope;7.33898227983064e-10!GO:0022402;cell cycle process;1.01272215992625e-09!GO:0016772;transferase activity, transferring phosphorus-containing groups;1.39745260510386e-09!GO:0042981;regulation of apoptosis;1.65828017756993e-09!GO:0016481;negative regulation of transcription;2.18373047637831e-09!GO:0051082;unfolded protein binding;2.25483872103667e-09!GO:0003743;translation initiation factor activity;2.25483872103667e-09!GO:0043067;regulation of programmed cell death;2.26362213168088e-09!GO:0051726;regulation of cell cycle;2.37295160667814e-09!GO:0000074;regulation of progression through cell cycle;3.2643360750942e-09!GO:0000502;proteasome complex (sensu Eukaryota);3.37397444179183e-09!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.52895268370517e-09!GO:0005746;mitochondrial respiratory chain;3.96564282671312e-09!GO:0008639;small protein conjugating enzyme activity;4.04974017877883e-09!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;4.11976771627141e-09!GO:0009892;negative regulation of metabolic process;4.25953689559858e-09!GO:0031965;nuclear membrane;4.42264113241258e-09!GO:0003924;GTPase activity;4.91980508009886e-09!GO:0006281;DNA repair;5.04810840803541e-09!GO:0007249;I-kappaB kinase/NF-kappaB cascade;5.11942920009508e-09!GO:0004842;ubiquitin-protein ligase activity;8.26434259184321e-09!GO:0017038;protein import;9.69277649688767e-09!GO:0005525;GTP binding;1.27951917621962e-08!GO:0046914;transition metal ion binding;1.28412520331598e-08!GO:0019899;enzyme binding;1.67850577631624e-08!GO:0019787;small conjugating protein ligase activity;1.75383273192082e-08!GO:0006333;chromatin assembly or disassembly;2.50577663423263e-08!GO:0004386;helicase activity;2.7909903013416e-08!GO:0045786;negative regulation of progression through cell cycle;2.83150272567376e-08!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.83150272567376e-08!GO:0006357;regulation of transcription from RNA polymerase II promoter;3.00143132913762e-08!GO:0043566;structure-specific DNA binding;3.09570055109748e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.62365863101354e-08!GO:0065004;protein-DNA complex assembly;3.77527109425505e-08!GO:0044248;cellular catabolic process;3.84710741483663e-08!GO:0005783;endoplasmic reticulum;4.45643443575008e-08!GO:0050136;NADH dehydrogenase (quinone) activity;4.54029354991426e-08!GO:0003954;NADH dehydrogenase activity;4.54029354991426e-08!GO:0008137;NADH dehydrogenase (ubiquinone) activity;4.54029354991426e-08!GO:0008565;protein transporter activity;4.62478259951083e-08!GO:0031988;membrane-bound vesicle;5.52055481577713e-08!GO:0051246;regulation of protein metabolic process;5.86768560592217e-08!GO:0005793;ER-Golgi intermediate compartment;7.17663981133388e-08!GO:0050657;nucleic acid transport;7.64441994780868e-08!GO:0051236;establishment of RNA localization;7.64441994780868e-08!GO:0050658;RNA transport;7.64441994780868e-08!GO:0031982;vesicle;7.89569862896104e-08!GO:0005694;chromosome;8.45231322012073e-08!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;8.67558662537318e-08!GO:0032561;guanyl ribonucleotide binding;9.17985323109084e-08!GO:0019001;guanyl nucleotide binding;9.17985323109084e-08!GO:0009719;response to endogenous stimulus;1.0830501448997e-07!GO:0031980;mitochondrial lumen;1.13406892838256e-07!GO:0005759;mitochondrial matrix;1.13406892838256e-07!GO:0006403;RNA localization;1.22513751068868e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.32408814338598e-07!GO:0016887;ATPase activity;1.45278850508363e-07!GO:0019829;cation-transporting ATPase activity;1.45881287271057e-07!GO:0042623;ATPase activity, coupled;1.72769653344219e-07!GO:0044453;nuclear membrane part;1.80073499740587e-07!GO:0044431;Golgi apparatus part;2.04961314056327e-07!GO:0016023;cytoplasmic membrane-bound vesicle;2.08361062244258e-07!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.30660633674548e-07!GO:0008026;ATP-dependent helicase activity;2.46532357982471e-07!GO:0051170;nuclear import;2.71292189793597e-07!GO:0016740;transferase activity;3.22587317795799e-07!GO:0006606;protein import into nucleus;3.3158185833101e-07!GO:0016881;acid-amino acid ligase activity;3.39087959426864e-07!GO:0042254;ribosome biogenesis and assembly;3.78995799770815e-07!GO:0031410;cytoplasmic vesicle;3.81852137816934e-07!GO:0016197;endosome transport;4.24219395330202e-07!GO:0043069;negative regulation of programmed cell death;4.48773599655112e-07!GO:0065009;regulation of a molecular function;4.53213340453686e-07!GO:0051789;response to protein stimulus;4.53213340453686e-07!GO:0006986;response to unfolded protein;4.53213340453686e-07!GO:0003714;transcription corepressor activity;4.90931897285331e-07!GO:0045892;negative regulation of transcription, DNA-dependent;5.00071748218505e-07!GO:0042775;organelle ATP synthesis coupled electron transport;5.19778321476441e-07!GO:0042773;ATP synthesis coupled electron transport;5.19778321476441e-07!GO:0030120;vesicle coat;5.51968401571643e-07!GO:0030662;coated vesicle membrane;5.51968401571643e-07!GO:0004674;protein serine/threonine kinase activity;6.71130891202379e-07!GO:0043066;negative regulation of apoptosis;7.51168893687546e-07!GO:0003697;single-stranded DNA binding;7.98293166358974e-07!GO:0005773;vacuole;8.30484284899493e-07!GO:0030964;NADH dehydrogenase complex (quinone);8.92766394019453e-07!GO:0045271;respiratory chain complex I;8.92766394019453e-07!GO:0005747;mitochondrial respiratory chain complex I;8.92766394019453e-07!GO:0015986;ATP synthesis coupled proton transport;9.27711426816765e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;9.27711426816765e-07!GO:0009966;regulation of signal transduction;9.33241243161134e-07!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;9.57701323778144e-07!GO:0006916;anti-apoptosis;1.02913526858054e-06!GO:0005643;nuclear pore;1.14962735389307e-06!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.258988964214e-06!GO:0030695;GTPase regulator activity;1.35825899253119e-06!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.62273353663316e-06!GO:0048522;positive regulation of cellular process;1.77183311192773e-06!GO:0006461;protein complex assembly;1.82374633196903e-06!GO:0051028;mRNA transport;1.85228942448828e-06!GO:0048475;coated membrane;1.85492984714731e-06!GO:0030117;membrane coat;1.85492984714731e-06!GO:0006260;DNA replication;2.08904313639987e-06!GO:0044427;chromosomal part;2.45059221523291e-06!GO:0006888;ER to Golgi vesicle-mediated transport;2.4784627393759e-06!GO:0000785;chromatin;3.35925847253762e-06!GO:0044432;endoplasmic reticulum part;4.45680307074679e-06!GO:0007265;Ras protein signal transduction;5.46398864250649e-06!GO:0005813;centrosome;5.46398864250649e-06!GO:0016301;kinase activity;8.09437921705215e-06!GO:0044440;endosomal part;8.23213444430972e-06!GO:0010008;endosome membrane;8.23213444430972e-06!GO:0000323;lytic vacuole;8.41756844198651e-06!GO:0005764;lysosome;8.41756844198651e-06!GO:0016469;proton-transporting two-sector ATPase complex;9.54258333560048e-06!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;9.58928382277961e-06!GO:0007005;mitochondrion organization and biogenesis;1.02150449235842e-05!GO:0015630;microtubule cytoskeleton;1.18166197942619e-05!GO:0005769;early endosome;1.19230812479778e-05!GO:0006364;rRNA processing;1.24387799131458e-05!GO:0003724;RNA helicase activity;1.35847512050793e-05!GO:0016072;rRNA metabolic process;1.42364150177971e-05!GO:0015078;hydrogen ion transmembrane transporter activity;1.47399080246921e-05!GO:0005770;late endosome;1.48049101367234e-05!GO:0005798;Golgi-associated vesicle;1.67097725046286e-05!GO:0030532;small nuclear ribonucleoprotein complex;1.70998864945568e-05!GO:0051427;hormone receptor binding;1.73407363645787e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.74010077758576e-05!GO:0005083;small GTPase regulator activity;1.74010077758576e-05!GO:0006754;ATP biosynthetic process;1.75800281212258e-05!GO:0006753;nucleoside phosphate metabolic process;1.75800281212258e-05!GO:0006164;purine nucleotide biosynthetic process;1.90145194884818e-05!GO:0009967;positive regulation of signal transduction;1.96699310964484e-05!GO:0006163;purine nucleotide metabolic process;2.04238974241763e-05!GO:0051186;cofactor metabolic process;2.05998137617794e-05!GO:0006402;mRNA catabolic process;2.13355759457701e-05!GO:0008047;enzyme activator activity;2.33818214530268e-05!GO:0009152;purine ribonucleotide biosynthetic process;2.54501495444928e-05!GO:0031252;leading edge;2.73488770935855e-05!GO:0009150;purine ribonucleotide metabolic process;2.85951924816756e-05!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.90186744920643e-05!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.90186744920643e-05!GO:0035257;nuclear hormone receptor binding;2.95528747519199e-05!GO:0046930;pore complex;3.27316340232642e-05!GO:0032446;protein modification by small protein conjugation;3.3884367013567e-05!GO:0050790;regulation of catalytic activity;3.42321628322869e-05!GO:0000139;Golgi membrane;3.69842550525912e-05!GO:0005096;GTPase activator activity;3.90515741606199e-05!GO:0000245;spliceosome assembly;3.90515741606199e-05!GO:0016773;phosphotransferase activity, alcohol group as acceptor;3.91489760555273e-05!GO:0005815;microtubule organizing center;4.16011873270391e-05!GO:0009259;ribonucleotide metabolic process;4.25053691618947e-05!GO:0016363;nuclear matrix;4.4593186171541e-05!GO:0065002;intracellular protein transport across a membrane;4.56549708719263e-05!GO:0009260;ribonucleotide biosynthetic process;4.75234824134503e-05!GO:0009142;nucleoside triphosphate biosynthetic process;4.92438041948635e-05!GO:0009201;ribonucleoside triphosphate biosynthetic process;4.92438041948635e-05!GO:0006613;cotranslational protein targeting to membrane;5.6859223736864e-05!GO:0033673;negative regulation of kinase activity;6.02141643574504e-05!GO:0006469;negative regulation of protein kinase activity;6.02141643574504e-05!GO:0046034;ATP metabolic process;6.07738012530892e-05!GO:0048518;positive regulation of biological process;6.25377753618033e-05!GO:0005761;mitochondrial ribosome;6.28535591366694e-05!GO:0000313;organellar ribosome;6.28535591366694e-05!GO:0009205;purine ribonucleoside triphosphate metabolic process;6.38026882224991e-05!GO:0009144;purine nucleoside triphosphate metabolic process;6.38026882224991e-05!GO:0016567;protein ubiquitination;6.41067156291669e-05!GO:0042175;nuclear envelope-endoplasmic reticulum network;8.32653974215177e-05!GO:0030036;actin cytoskeleton organization and biogenesis;8.60133233482815e-05!GO:0005789;endoplasmic reticulum membrane;8.75891096807935e-05!GO:0000278;mitotic cell cycle;9.05461449199398e-05!GO:0000151;ubiquitin ligase complex;9.39535984125586e-05!GO:0009199;ribonucleoside triphosphate metabolic process;0.000101128923417118!GO:0051168;nuclear export;0.000119437779397759!GO:0051348;negative regulation of transferase activity;0.000145841796372822!GO:0016787;hydrolase activity;0.000155445347376318!GO:0003690;double-stranded DNA binding;0.000155910325752456!GO:0003729;mRNA binding;0.00015644340260932!GO:0008186;RNA-dependent ATPase activity;0.000158234608963689!GO:0009141;nucleoside triphosphate metabolic process;0.000161061149252475!GO:0006399;tRNA metabolic process;0.000165725291825407!GO:0007050;cell cycle arrest;0.000175557186130496!GO:0045259;proton-transporting ATP synthase complex;0.000182704293190502!GO:0006732;coenzyme metabolic process;0.000191384297466806!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.000213502579555006!GO:0004812;aminoacyl-tRNA ligase activity;0.000213502579555006!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.000213502579555006!GO:0031497;chromatin assembly;0.000221250958221629!GO:0006334;nucleosome assembly;0.000232224803106851!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.000234687629990059!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000257411361129426!GO:0008654;phospholipid biosynthetic process;0.000280697230654288!GO:0016779;nucleotidyltransferase activity;0.000318688049681905!GO:0045333;cellular respiration;0.000320487300747594!GO:0009060;aerobic respiration;0.000323139423662027!GO:0003702;RNA polymerase II transcription factor activity;0.000328540532991646!GO:0006650;glycerophospholipid metabolic process;0.000336160566282974!GO:0008234;cysteine-type peptidase activity;0.000336160566282974!GO:0048471;perinuclear region of cytoplasm;0.000337307560182531!GO:0030384;phosphoinositide metabolic process;0.000345238300152915!GO:0006401;RNA catabolic process;0.00036034508177077!GO:0043038;amino acid activation;0.000375750767946066!GO:0006418;tRNA aminoacylation for protein translation;0.000375750767946066!GO:0043039;tRNA aminoacylation;0.000375750767946066!GO:0006468;protein amino acid phosphorylation;0.000400184666626004!GO:0045893;positive regulation of transcription, DNA-dependent;0.000415064809485456!GO:0004004;ATP-dependent RNA helicase activity;0.000478323685671429!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000497757437449042!GO:0001726;ruffle;0.000504716925621936!GO:0008287;protein serine/threonine phosphatase complex;0.000509023604390667!GO:0030518;steroid hormone receptor signaling pathway;0.00052079449407827!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000553488902290068!GO:0006352;transcription initiation;0.000556696453160711!GO:0006612;protein targeting to membrane;0.000560717238419223!GO:0015631;tubulin binding;0.00056466678962309!GO:0008361;regulation of cell size;0.000569782129129821!GO:0006950;response to stress;0.00058210634962512!GO:0045941;positive regulation of transcription;0.000585105900258287!GO:0051188;cofactor biosynthetic process;0.000661586100047867!GO:0030029;actin filament-based process;0.000735380894101699!GO:0005839;proteasome core complex (sensu Eukaryota);0.000751146355546669!GO:0060090;molecular adaptor activity;0.000770548543092723!GO:0016251;general RNA polymerase II transcription factor activity;0.000771902704026584!GO:0030659;cytoplasmic vesicle membrane;0.000793251773494603!GO:0030658;transport vesicle membrane;0.000830203712891832!GO:0005667;transcription factor complex;0.000834593315741807!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000885964163185512!GO:0016049;cell growth;0.000906699524027854!GO:0012506;vesicle membrane;0.000906699524027854!GO:0009056;catabolic process;0.000912307226732365!GO:0004428;inositol or phosphatidylinositol kinase activity;0.00102042784554047!GO:0006643;membrane lipid metabolic process;0.00108218366381194!GO:0005885;Arp2/3 protein complex;0.00110919421841439!GO:0009055;electron carrier activity;0.00115142109632835!GO:0006891;intra-Golgi vesicle-mediated transport;0.00125910110642381!GO:0006417;regulation of translation;0.00129575021374168!GO:0030521;androgen receptor signaling pathway;0.00135533370217746!GO:0006752;group transfer coenzyme metabolic process;0.00153515950337274!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.00160459933568894!GO:0031901;early endosome membrane;0.00162630814215256!GO:0051338;regulation of transferase activity;0.00163474403243867!GO:0001558;regulation of cell growth;0.00164843757517265!GO:0030522;intracellular receptor-mediated signaling pathway;0.0017147714073648!GO:0043623;cellular protein complex assembly;0.00185417529588035!GO:0043065;positive regulation of apoptosis;0.00186011119858098!GO:0043549;regulation of kinase activity;0.00198007844966572!GO:0044433;cytoplasmic vesicle part;0.00201277391186168!GO:0008017;microtubule binding;0.00201729387824536!GO:0046519;sphingoid metabolic process;0.00204354280893873!GO:0048468;cell development;0.00207826870470615!GO:0033116;ER-Golgi intermediate compartment membrane;0.00214622283421082!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00214917848970085!GO:0004672;protein kinase activity;0.00222026039348399!GO:0004298;threonine endopeptidase activity;0.00225244367118859!GO:0019783;small conjugating protein-specific protease activity;0.0023086749736468!GO:0005099;Ras GTPase activator activity;0.00233044621980346!GO:0046467;membrane lipid biosynthetic process;0.00241173506052957!GO:0043068;positive regulation of programmed cell death;0.00244937525870658!GO:0045859;regulation of protein kinase activity;0.00253263322045829!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00264327515180421!GO:0004843;ubiquitin-specific protease activity;0.00264327515180421!GO:0009108;coenzyme biosynthetic process;0.00275422977493368!GO:0006261;DNA-dependent DNA replication;0.00277592667424571!GO:0045792;negative regulation of cell size;0.00279199680599245!GO:0043021;ribonucleoprotein binding;0.00289591912091963!GO:0030133;transport vesicle;0.00299670472432598!GO:0006672;ceramide metabolic process;0.00302895351019157!GO:0007034;vacuolar transport;0.00307330631180116!GO:0030660;Golgi-associated vesicle membrane;0.00308740989278397!GO:0005741;mitochondrial outer membrane;0.00314367265566333!GO:0051252;regulation of RNA metabolic process;0.00322370989426186!GO:0016044;membrane organization and biogenesis;0.00323036479244472!GO:0006818;hydrogen transport;0.00323086259192328!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00323461058286175!GO:0005774;vacuolar membrane;0.00334580957998457!GO:0017091;AU-rich element binding;0.00338844172793967!GO:0050779;RNA destabilization;0.00338844172793967!GO:0000289;poly(A) tail shortening;0.00338844172793967!GO:0006099;tricarboxylic acid cycle;0.00341322900682253!GO:0046356;acetyl-CoA catabolic process;0.00341322900682253!GO:0030308;negative regulation of cell growth;0.00341576463597994!GO:0031326;regulation of cellular biosynthetic process;0.00341576463597994!GO:0046983;protein dimerization activity;0.00342856042600085!GO:0031072;heat shock protein binding;0.00346443726101539!GO:0015992;proton transport;0.00351733090644238!GO:0043407;negative regulation of MAP kinase activity;0.00354276959037011!GO:0006917;induction of apoptosis;0.00358986484490209!GO:0035258;steroid hormone receptor binding;0.00359631216713643!GO:0042802;identical protein binding;0.00377148518909378!GO:0031902;late endosome membrane;0.00401892373914499!GO:0016311;dephosphorylation;0.00403850168001265!GO:0005665;DNA-directed RNA polymerase II, core complex;0.00414589279420827!GO:0043488;regulation of mRNA stability;0.00439245189529182!GO:0043487;regulation of RNA stability;0.00439245189529182!GO:0005057;receptor signaling protein activity;0.00439332195319274!GO:0008286;insulin receptor signaling pathway;0.00446618358151157!GO:0006414;translational elongation;0.00458890372324879!GO:0009889;regulation of biosynthetic process;0.00472499714834146!GO:0046854;phosphoinositide phosphorylation;0.00474176471094892!GO:0018193;peptidyl-amino acid modification;0.00474176471094892!GO:0004261;cathepsin G activity;0.00479710972381035!GO:0030127;COPII vesicle coat;0.00479710972381035!GO:0012507;ER to Golgi transport vesicle membrane;0.00479710972381035!GO:0022403;cell cycle phase;0.00491749359710121!GO:0005048;signal sequence binding;0.00502058119036184!GO:0012502;induction of programmed cell death;0.00502058119036184!GO:0045926;negative regulation of growth;0.00502058119036184!GO:0030134;ER to Golgi transport vesicle;0.00511587968855993!GO:0030118;clathrin coat;0.00530067899091949!GO:0006338;chromatin remodeling;0.00535395390361463!GO:0004221;ubiquitin thiolesterase activity;0.00535395390361463!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00586117983741223!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00591378886568522!GO:0015399;primary active transmembrane transporter activity;0.00591378886568522!GO:0006084;acetyl-CoA metabolic process;0.006049247320525!GO:0043086;negative regulation of catalytic activity;0.00608267366479181!GO:0005070;SH3/SH2 adaptor activity;0.00613427034300774!GO:0045045;secretory pathway;0.00614861501459481!GO:0032940;secretion by cell;0.00620707000843579!GO:0051329;interphase of mitotic cell cycle;0.00631680610048372!GO:0030663;COPI coated vesicle membrane;0.00686879622661918!GO:0030126;COPI vesicle coat;0.00686879622661918!GO:0051301;cell division;0.00690532021934962!GO:0009893;positive regulation of metabolic process;0.00715078802973209!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00727497163534662!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00727497163534662!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00727497163534662!GO:0048500;signal recognition particle;0.0073097505489587!GO:0019210;kinase inhibitor activity;0.00744879240203738!GO:0030041;actin filament polymerization;0.00747159561190368!GO:0043087;regulation of GTPase activity;0.00767879544198208!GO:0004860;protein kinase inhibitor activity;0.00767879544198208!GO:0005874;microtubule;0.0078437387753509!GO:0031968;organelle outer membrane;0.00788046715768225!GO:0004722;protein serine/threonine phosphatase activity;0.00789392394149124!GO:0016859;cis-trans isomerase activity;0.00799103369739764!GO:0051325;interphase;0.00799103369739764!GO:0030374;ligand-dependent nuclear receptor transcription coactivator activity;0.00816214298785901!GO:0019867;outer membrane;0.00840944725916958!GO:0006611;protein export from nucleus;0.0086251371777571!GO:0046474;glycerophospholipid biosynthetic process;0.00866320643052182!GO:0008092;cytoskeletal protein binding;0.00889045147323023!GO:0003746;translation elongation factor activity;0.00893875920776291!GO:0022415;viral reproductive process;0.00915530166530613!GO:0003899;DNA-directed RNA polymerase activity;0.00923510264015045!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.009456064794699!GO:0035035;histone acetyltransferase binding;0.00952848965128673!GO:0040008;regulation of growth;0.00963943883106083!GO:0046966;thyroid hormone receptor binding;0.00963943883106083!GO:0051056;regulation of small GTPase mediated signal transduction;0.00987489805684762!GO:0044437;vacuolar part;0.00997138854595824!GO:0046834;lipid phosphorylation;0.0102379302919629!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0103385315749984!GO:0019843;rRNA binding;0.0103923291121253!GO:0007010;cytoskeleton organization and biogenesis;0.0105515691011034!GO:0016790;thiolester hydrolase activity;0.0105515691011034!GO:0051087;chaperone binding;0.0106932020291468!GO:0008637;apoptotic mitochondrial changes;0.0107748522086698!GO:0030867;rough endoplasmic reticulum membrane;0.0108912166740733!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0110118839182452!GO:0001516;prostaglandin biosynthetic process;0.0110693813596752!GO:0046457;prostanoid biosynthetic process;0.0110693813596752!GO:0016584;nucleosome positioning;0.0112375029866867!GO:0008632;apoptotic program;0.0112457904135055!GO:0030137;COPI-coated vesicle;0.0113089213252734!GO:0008333;endosome to lysosome transport;0.0114876283260267!GO:0022890;inorganic cation transmembrane transporter activity;0.0117142882083964!GO:0051336;regulation of hydrolase activity;0.0117309861357639!GO:0006470;protein amino acid dephosphorylation;0.0125720012408871!GO:0000118;histone deacetylase complex;0.0126136257864598!GO:0030119;AP-type membrane coat adaptor complex;0.0135694249295152!GO:0045746;negative regulation of Notch signaling pathway;0.0137015848394876!GO:0006839;mitochondrial transport;0.014180945854183!GO:0008139;nuclear localization sequence binding;0.0141910511963321!GO:0003682;chromatin binding;0.0143526934301626!GO:0040029;regulation of gene expression, epigenetic;0.0144209614676586!GO:0046489;phosphoinositide biosynthetic process;0.0144537690714679!GO:0007040;lysosome organization and biogenesis;0.0144537690714679!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0144899428661741!GO:0045047;protein targeting to ER;0.0144899428661741!GO:0031625;ubiquitin protein ligase binding;0.0146726774015399!GO:0046822;regulation of nucleocytoplasmic transport;0.0148290407484614!GO:0005637;nuclear inner membrane;0.01484000942456!GO:0048487;beta-tubulin binding;0.0152262714589684!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0154878219096084!GO:0009109;coenzyme catabolic process;0.0156615851966579!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.0158418495131737!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0160578696016161!GO:0007041;lysosomal transport;0.0160578696016161!GO:0005765;lysosomal membrane;0.0160578696016161!GO:0006376;mRNA splice site selection;0.016425292965895!GO:0000389;nuclear mRNA 3'-splice site recognition;0.016425292965895!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0166432266087761!GO:0022406;membrane docking;0.0167200483160292!GO:0048278;vesicle docking;0.0167200483160292!GO:0006509;membrane protein ectodomain proteolysis;0.0168033615553749!GO:0033619;membrane protein proteolysis;0.0168033615553749!GO:0051059;NF-kappaB binding;0.0171057332929923!GO:0008250;oligosaccharyl transferase complex;0.0176387634823899!GO:0005791;rough endoplasmic reticulum;0.0179736064277446!GO:0030258;lipid modification;0.0180559411329347!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0180559411329347!GO:0005942;phosphoinositide 3-kinase complex;0.0180918204764869!GO:0006661;phosphatidylinositol biosynthetic process;0.01839258986836!GO:0051098;regulation of binding;0.0186293038008916!GO:0006644;phospholipid metabolic process;0.0187805375483287!GO:0004576;oligosaccharyl transferase activity;0.0188069476285981!GO:0006405;RNA export from nucleus;0.0189066899119704!GO:0009266;response to temperature stimulus;0.0191521888876666!GO:0006383;transcription from RNA polymerase III promoter;0.0192630355628642!GO:0030880;RNA polymerase complex;0.0199428066669629!GO:0050681;androgen receptor binding;0.0200039173556452!GO:0046578;regulation of Ras protein signal transduction;0.0200336618255106!GO:0051052;regulation of DNA metabolic process;0.0202066695675034!GO:0006904;vesicle docking during exocytosis;0.0202366715960353!GO:0008312;7S RNA binding;0.0204487698726431!GO:0006354;RNA elongation;0.020466140270224!GO:0051187;cofactor catabolic process;0.0205415658954162!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0207615581982993!GO:0030176;integral to endoplasmic reticulum membrane;0.0212719862074009!GO:0030131;clathrin adaptor complex;0.0223207335255278!GO:0000209;protein polyubiquitination;0.0225955628563478!GO:0030125;clathrin vesicle coat;0.0233215835803619!GO:0030665;clathrin coated vesicle membrane;0.0233215835803619!GO:0050811;GABA receptor binding;0.0233352939565932!GO:0046456;icosanoid biosynthetic process;0.0237298707405886!GO:0000188;inactivation of MAPK activity;0.0240010203153964!GO:0042771;DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis;0.0244783544527273!GO:0031325;positive regulation of cellular metabolic process;0.0251017650752075!GO:0005657;replication fork;0.0251898032387204!GO:0043492;ATPase activity, coupled to movement of substances;0.0252909146593295!GO:0005669;transcription factor TFIID complex;0.0254106679392311!GO:0000059;protein import into nucleus, docking;0.0254106679392311!GO:0006897;endocytosis;0.0254106679392311!GO:0010324;membrane invagination;0.0254106679392311!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0254191116229668!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0261126715720002!GO:0008276;protein methyltransferase activity;0.0261126715720002!GO:0018196;peptidyl-asparagine modification;0.0261126715720002!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0261126715720002!GO:0006984;ER-nuclear signaling pathway;0.0261126715720002!GO:0003684;damaged DNA binding;0.0261126715720002!GO:0033367;protein localization in mast cell secretory granule;0.0261126715720002!GO:0033365;protein localization in organelle;0.0261126715720002!GO:0033371;T cell secretory granule organization and biogenesis;0.0261126715720002!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.0261126715720002!GO:0033375;protease localization in T cell secretory granule;0.0261126715720002!GO:0042629;mast cell granule;0.0261126715720002!GO:0033377;maintenance of protein localization in T cell secretory granule;0.0261126715720002!GO:0033364;mast cell secretory granule organization and biogenesis;0.0261126715720002!GO:0033380;granzyme B localization in T cell secretory granule;0.0261126715720002!GO:0033379;maintenance of protease localization in T cell secretory granule;0.0261126715720002!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.0261126715720002!GO:0033368;protease localization in mast cell secretory granule;0.0261126715720002!GO:0033366;protein localization in secretory granule;0.0261126715720002!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.0261126715720002!GO:0033374;protein localization in T cell secretory granule;0.0261126715720002!GO:0046488;phosphatidylinositol metabolic process;0.0262005861163805!GO:0033549;MAP kinase phosphatase activity;0.0263271699121352!GO:0017017;MAP kinase tyrosine/serine/threonine phosphatase activity;0.0263271699121352!GO:0005095;GTPase inhibitor activity;0.0265221112454735!GO:0008154;actin polymerization and/or depolymerization;0.0269765233824172!GO:0005020;stem cell factor receptor activity;0.0270116958264184!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0274722645320161!GO:0000428;DNA-directed RNA polymerase complex;0.0274722645320161!GO:0031647;regulation of protein stability;0.0277291262248243!GO:0016791;phosphoric monoester hydrolase activity;0.0279971776029956!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0286983044229952!GO:0035004;phosphoinositide 3-kinase activity;0.0288695000185488!GO:0016303;1-phosphatidylinositol-3-kinase activity;0.0288695000185488!GO:0003711;transcription elongation regulator activity;0.0305290364209053!GO:0005684;U2-dependent spliceosome;0.0306461300605883!GO:0016279;protein-lysine N-methyltransferase activity;0.0309346112971381!GO:0018024;histone-lysine N-methyltransferase activity;0.0309346112971381!GO:0016278;lysine N-methyltransferase activity;0.0309346112971381!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0311216359948663!GO:0045646;regulation of erythrocyte differentiation;0.0312406655682956!GO:0030218;erythrocyte differentiation;0.0314424543075452!GO:0007004;telomere maintenance via telomerase;0.0314424543075452!GO:0004721;phosphoprotein phosphatase activity;0.0320186575072157!GO:0000087;M phase of mitotic cell cycle;0.0325829790306075!GO:0007030;Golgi organization and biogenesis;0.0326414795020251!GO:0035026;leading edge cell differentiation;0.0328003036517595!GO:0004527;exonuclease activity;0.0330294648985224!GO:0030027;lamellipodium;0.0330294648985224!GO:0016570;histone modification;0.0330294648985224!GO:0019904;protein domain specific binding;0.033127470431672!GO:0000082;G1/S transition of mitotic cell cycle;0.0336185497766059!GO:0016569;covalent chromatin modification;0.0338819973613473!GO:0008629;induction of apoptosis by intracellular signals;0.0341567100247935!GO:0007266;Rho protein signal transduction;0.0347003945178138!GO:0045576;mast cell activation;0.0349648768194382!GO:0043022;ribosome binding;0.0355152261074553!GO:0006607;NLS-bearing substrate import into nucleus;0.0355152261074553!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0357193185408279!GO:0005819;spindle;0.0359152615278879!GO:0007067;mitosis;0.036789966728092!GO:0000159;protein phosphatase type 2A complex;0.0368041075990456!GO:0045454;cell redox homeostasis;0.0368327572033158!GO:0042026;protein refolding;0.0375359808354314!GO:0031301;integral to organelle membrane;0.0375359808354314!GO:0005762;mitochondrial large ribosomal subunit;0.0375359808354314!GO:0000315;organellar large ribosomal subunit;0.0375359808354314!GO:0007033;vacuole organization and biogenesis;0.037548694367117!GO:0019377;glycolipid catabolic process;0.0375630913272538!GO:0006665;sphingolipid metabolic process;0.0375630913272538!GO:0046426;negative regulation of JAK-STAT cascade;0.037655292620109!GO:0008601;protein phosphatase type 2A regulator activity;0.0381452957729882!GO:0047485;protein N-terminus binding;0.0382851870276983!GO:0019901;protein kinase binding;0.0383931691777613!GO:0008610;lipid biosynthetic process;0.0385196611208245!GO:0005869;dynactin complex;0.0387083902105061!GO:0006892;post-Golgi vesicle-mediated transport;0.0388735365502106!GO:0005484;SNAP receptor activity;0.0394496327097433!GO:0030145;manganese ion binding;0.0397248456858053!GO:0030503;regulation of cell redox homeostasis;0.0402317975943686!GO:0051235;maintenance of localization;0.0403373842013737!GO:0001727;lipid kinase activity;0.0405185814997317!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0407750187718821!GO:0030271;chymase activity;0.0417952280851771!GO:0043681;protein import into mitochondrion;0.0423000735469782!GO:0004177;aminopeptidase activity;0.0433466953483148!GO:0016601;Rac protein signal transduction;0.0444216634699226!GO:0015266;protein channel activity;0.0444272113603696!GO:0046934;phosphatidylinositol-4,5-bisphosphate 3-kinase activity;0.0445169841775469!GO:0000119;mediator complex;0.0446592524990718!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0447416689208713!GO:0051920;peroxiredoxin activity;0.044871813401191!GO:0004402;histone acetyltransferase activity;0.0455276123260763!GO:0004468;lysine N-acetyltransferase activity;0.0455276123260763!GO:0032318;regulation of Ras GTPase activity;0.046118210216084!GO:0015923;mannosidase activity;0.046118210216084!GO:0051219;phosphoprotein binding;0.0466340742887129!GO:0045603;positive regulation of endothelial cell differentiation;0.0466340742887129!GO:0030911;TPR domain binding;0.0472492997202291!GO:0005788;endoplasmic reticulum lumen;0.048294774185048!GO:0005955;calcineurin complex;0.0487497625635019!GO:0032507;maintenance of cellular protein localization;0.0487497625635019!GO:0006013;mannose metabolic process;0.0488182923695237!GO:0030019;tryptase activity;0.0489308875125658!GO:0051223;regulation of protein transport;0.0493311548455764!GO:0045815;positive regulation of gene expression, epigenetic;0.0496166749672875 | |||
|sample_id=11565 | |sample_id=11565 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 105: | ||
|sample_tissue=skin | |sample_tissue=skin | ||
|top_motifs=ATF4:3.33386738573;CREB1:2.799649005;GATA6:2.7538377651;PPARG:2.7271280513;NFKB1_REL_RELA:2.60623832437;HSF1,2:2.54663995702;PAX2:2.43599377068;ATF5_CREB3:2.35267094945;EGR1..3:2.059795822;MAFB:2.0442048434;RFX1:1.68572381835;JUN:1.61463279334;FOXN1:1.595046261;SREBF1,2:1.55115762463;EP300:1.52072147266;ATF2:1.50056038335;RXRA_VDR{dimer}:1.46937196628;RUNX1..3:1.46773143893;TGIF1:1.46737919695;PATZ1:1.44051844677;HIF1A:1.43294887023;XBP1:1.39341486397;RFX2..5_RFXANK_RFXAP:1.37442356885;FOX{D1,D2}:1.37416104883;ESRRA:1.30673967962;SPIB:1.29228497957;FOS_FOS{B,L1}_JUN{B,D}:1.28634651049;SPI1:1.28323992963;SP1:1.27906224961;FOSL2:1.26455246142;BACH2:1.24229410059;STAT1,3:1.23807169698;ESR1:1.23299396632;TFAP2{A,C}:1.21943982685;ELF1,2,4:1.21895614796;NFE2L1:1.16048573756;ATF6:1.12374773757;NFE2:1.09994087018;BPTF:1.0088244799;FOX{F1,F2,J1}:0.978044332501;ETS1,2:0.960445376417;TLX2:0.956305951121;HOXA9_MEIS1:0.927040206971;RXR{A,B,G}:0.925503033335;CDX1,2,4:0.911368314218;SPZ1:0.821927933489;MEF2{A,B,C,D}:0.803254082537;SMAD1..7,9:0.764890283247;MAZ:0.701618819367;NFATC1..3:0.682247449178;MYB:0.67701265319;NHLH1,2:0.632327164881;HES1:0.621511889131;TFAP4:0.613849995806;TBX4,5:0.609393406151;HBP1_HMGB_SSRP1_UBTF:0.607171090822;DMAP1_NCOR{1,2}_SMARC:0.605188333361;NANOG{mouse}:0.598983598252;TBP:0.579591265078;AR:0.579471486212;ZNF238:0.473485585569;TFCP2:0.461328808932;ZFP161:0.426684307029;SRF:0.424530586395;ZNF148:0.406955551858;NFIL3:0.344579607336;BREu{core}:0.343567030726;FOX{I1,J2}:0.319556692412;SOX2:0.297849226899;HMX1:0.279236564295;EBF1:0.277446854105;IKZF2:0.228792692227;TFAP2B:0.219179583271;MYFfamily:0.211957785869;ZIC1..3:0.208041312833;VSX1,2:0.203229135698;GLI1..3:0.180032286214;PAX3,7:0.171969052518;POU2F1..3:0.171301832844;XCPE1{core}:0.150560649632;PBX1:0.142395409392;MED-1{core}:0.135390257609;DBP:0.114693759948;HIC1:0.114551809852;NFE2L2:0.0973554988556;NFY{A,B,C}:0.0279272336843;PAX1,9:0.0133015045606;FOXQ1:0.00549935299057;CRX:-0.0196359087958;FOXO1,3,4:-0.0841977856756;bHLH_family:-0.0872233717113;TAL1_TCF{3,4,12}:-0.0888765723814;ZBTB6:-0.0987515706235;MTE{core}:-0.117917818278;MTF1:-0.122597176801;FOXP1:-0.151519890659;AHR_ARNT_ARNT2:-0.154851594561;RREB1:-0.157921171172;HOX{A6,A7,B6,B7}:-0.183295753204;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.213864363786;NR6A1:-0.245171878331;ALX1:-0.247889859408;GTF2I:-0.277180472887;IRF1,2:-0.293081658721;MZF1:-0.306437646206;NKX3-2:-0.371948147193;TLX1..3_NFIC{dimer}:-0.38802477235;REST:-0.389566865778;HLF:-0.391994556829;GZF1:-0.413776407087;LHX3,4:-0.434066693673;EN1,2:-0.43803921338;SOX5:-0.438887233382;ELK1,4_GABP{A,B1}:-0.439646892715;PAX5:-0.465962292631;RBPJ:-0.496145980472;HNF4A_NR2F1,2:-0.505906530885;ZNF384:-0.510434401085;STAT2,4,6:-0.531193617917;CEBPA,B_DDIT3:-0.552976995997;CUX2:-0.553213093218;TFDP1:-0.560300920441;EVI1:-0.565501558129;FOXL1:-0.612890074518;NRF1:-0.615649361746;NKX6-1,2:-0.616734155505;E2F1..5:-0.622225989106;PAX6:-0.624722454395;PRRX1,2:-0.644954913782;HOX{A5,B5}:-0.647841798742;ZNF423:-0.652714881178;FOXP3:-0.659408335296;TOPORS:-0.669688217503;NKX2-3_NKX2-5:-0.701124332191;PAX8:-0.711509279585;SOX{8,9,10}:-0.712825972983;HNF1A:-0.728352440392;PAX4:-0.731159949696;ZNF143:-0.734828173763;TP53:-0.741924503939;ZEB1:-0.746020358946;TEAD1:-0.756227490133;RORA:-0.789231296204;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.799807486876;GATA4:-0.827868310793;NKX3-1:-0.848522143134;NR5A1,2:-0.851636605308;PITX1..3:-0.85825196107;NKX2-1,4:-0.89482873524;IKZF1:-0.905389093062;LEF1_TCF7_TCF7L1,2:-0.922677656;POU5F1:-0.923281557818;T:-0.943800100838;PRDM1:-0.966970167827;SNAI1..3:-0.982430659219;POU6F1:-0.995853227555;GTF2A1,2:-1.02856632349;OCT4_SOX2{dimer}:-1.03050989347;HAND1,2:-1.04139289673;NANOG:-1.08845373292;ZBTB16:-1.09649331035;YY1:-1.14815829114;FOXM1:-1.16451176487;HOX{A4,D4}:-1.21806975913;ARID5B:-1.22561413294;NKX2-2,8:-1.229645039;IRF7:-1.26001563964;STAT5{A,B}:-1.27334540163;SOX17:-1.28121812057;GFI1:-1.31504476213;UFEwm:-1.35309539076;FOXA2:-1.36395594674;AIRE:-1.3805062835;ONECUT1,2:-1.45664843387;POU1F1:-1.48141657697;NFIX:-1.48698144643;MYOD1:-1.53885555302;NR3C1:-1.54007983816;FOXD3:-1.55757165927;HMGA1,2:-1.61783149538;ALX4:-1.73949601709;GCM1,2:-1.77193924695;MYBL2:-1.81156413647;NR1H4:-1.97703042797;POU3F1..4:-2.11417507353;GFI1B:-2.15348422062;KLF4:-2.21393068929;PDX1:-2.24955954679;ADNP_IRX_SIX_ZHX:-2.49032173364;CDC5L:-2.54061109569;LMO2:-2.6975593626;TEF:-3.06987263563 | |top_motifs=ATF4:3.33386738573;CREB1:2.799649005;GATA6:2.7538377651;PPARG:2.7271280513;NFKB1_REL_RELA:2.60623832437;HSF1,2:2.54663995702;PAX2:2.43599377068;ATF5_CREB3:2.35267094945;EGR1..3:2.059795822;MAFB:2.0442048434;RFX1:1.68572381835;JUN:1.61463279334;FOXN1:1.595046261;SREBF1,2:1.55115762463;EP300:1.52072147266;ATF2:1.50056038335;RXRA_VDR{dimer}:1.46937196628;RUNX1..3:1.46773143893;TGIF1:1.46737919695;PATZ1:1.44051844677;HIF1A:1.43294887023;XBP1:1.39341486397;RFX2..5_RFXANK_RFXAP:1.37442356885;FOX{D1,D2}:1.37416104883;ESRRA:1.30673967962;SPIB:1.29228497957;FOS_FOS{B,L1}_JUN{B,D}:1.28634651049;SPI1:1.28323992963;SP1:1.27906224961;FOSL2:1.26455246142;BACH2:1.24229410059;STAT1,3:1.23807169698;ESR1:1.23299396632;TFAP2{A,C}:1.21943982685;ELF1,2,4:1.21895614796;NFE2L1:1.16048573756;ATF6:1.12374773757;NFE2:1.09994087018;BPTF:1.0088244799;FOX{F1,F2,J1}:0.978044332501;ETS1,2:0.960445376417;TLX2:0.956305951121;HOXA9_MEIS1:0.927040206971;RXR{A,B,G}:0.925503033335;CDX1,2,4:0.911368314218;SPZ1:0.821927933489;MEF2{A,B,C,D}:0.803254082537;SMAD1..7,9:0.764890283247;MAZ:0.701618819367;NFATC1..3:0.682247449178;MYB:0.67701265319;NHLH1,2:0.632327164881;HES1:0.621511889131;TFAP4:0.613849995806;TBX4,5:0.609393406151;HBP1_HMGB_SSRP1_UBTF:0.607171090822;DMAP1_NCOR{1,2}_SMARC:0.605188333361;NANOG{mouse}:0.598983598252;TBP:0.579591265078;AR:0.579471486212;ZNF238:0.473485585569;TFCP2:0.461328808932;ZFP161:0.426684307029;SRF:0.424530586395;ZNF148:0.406955551858;NFIL3:0.344579607336;BREu{core}:0.343567030726;FOX{I1,J2}:0.319556692412;SOX2:0.297849226899;HMX1:0.279236564295;EBF1:0.277446854105;IKZF2:0.228792692227;TFAP2B:0.219179583271;MYFfamily:0.211957785869;ZIC1..3:0.208041312833;VSX1,2:0.203229135698;GLI1..3:0.180032286214;PAX3,7:0.171969052518;POU2F1..3:0.171301832844;XCPE1{core}:0.150560649632;PBX1:0.142395409392;MED-1{core}:0.135390257609;DBP:0.114693759948;HIC1:0.114551809852;NFE2L2:0.0973554988556;NFY{A,B,C}:0.0279272336843;PAX1,9:0.0133015045606;FOXQ1:0.00549935299057;CRX:-0.0196359087958;FOXO1,3,4:-0.0841977856756;bHLH_family:-0.0872233717113;TAL1_TCF{3,4,12}:-0.0888765723814;ZBTB6:-0.0987515706235;MTE{core}:-0.117917818278;MTF1:-0.122597176801;FOXP1:-0.151519890659;AHR_ARNT_ARNT2:-0.154851594561;RREB1:-0.157921171172;HOX{A6,A7,B6,B7}:-0.183295753204;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.213864363786;NR6A1:-0.245171878331;ALX1:-0.247889859408;GTF2I:-0.277180472887;IRF1,2:-0.293081658721;MZF1:-0.306437646206;NKX3-2:-0.371948147193;TLX1..3_NFIC{dimer}:-0.38802477235;REST:-0.389566865778;HLF:-0.391994556829;GZF1:-0.413776407087;LHX3,4:-0.434066693673;EN1,2:-0.43803921338;SOX5:-0.438887233382;ELK1,4_GABP{A,B1}:-0.439646892715;PAX5:-0.465962292631;RBPJ:-0.496145980472;HNF4A_NR2F1,2:-0.505906530885;ZNF384:-0.510434401085;STAT2,4,6:-0.531193617917;CEBPA,B_DDIT3:-0.552976995997;CUX2:-0.553213093218;TFDP1:-0.560300920441;EVI1:-0.565501558129;FOXL1:-0.612890074518;NRF1:-0.615649361746;NKX6-1,2:-0.616734155505;E2F1..5:-0.622225989106;PAX6:-0.624722454395;PRRX1,2:-0.644954913782;HOX{A5,B5}:-0.647841798742;ZNF423:-0.652714881178;FOXP3:-0.659408335296;TOPORS:-0.669688217503;NKX2-3_NKX2-5:-0.701124332191;PAX8:-0.711509279585;SOX{8,9,10}:-0.712825972983;HNF1A:-0.728352440392;PAX4:-0.731159949696;ZNF143:-0.734828173763;TP53:-0.741924503939;ZEB1:-0.746020358946;TEAD1:-0.756227490133;RORA:-0.789231296204;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.799807486876;GATA4:-0.827868310793;NKX3-1:-0.848522143134;NR5A1,2:-0.851636605308;PITX1..3:-0.85825196107;NKX2-1,4:-0.89482873524;IKZF1:-0.905389093062;LEF1_TCF7_TCF7L1,2:-0.922677656;POU5F1:-0.923281557818;T:-0.943800100838;PRDM1:-0.966970167827;SNAI1..3:-0.982430659219;POU6F1:-0.995853227555;GTF2A1,2:-1.02856632349;OCT4_SOX2{dimer}:-1.03050989347;HAND1,2:-1.04139289673;NANOG:-1.08845373292;ZBTB16:-1.09649331035;YY1:-1.14815829114;FOXM1:-1.16451176487;HOX{A4,D4}:-1.21806975913;ARID5B:-1.22561413294;NKX2-2,8:-1.229645039;IRF7:-1.26001563964;STAT5{A,B}:-1.27334540163;SOX17:-1.28121812057;GFI1:-1.31504476213;UFEwm:-1.35309539076;FOXA2:-1.36395594674;AIRE:-1.3805062835;ONECUT1,2:-1.45664843387;POU1F1:-1.48141657697;NFIX:-1.48698144643;MYOD1:-1.53885555302;NR3C1:-1.54007983816;FOXD3:-1.55757165927;HMGA1,2:-1.61783149538;ALX4:-1.73949601709;GCM1,2:-1.77193924695;MYBL2:-1.81156413647;NR1H4:-1.97703042797;POU3F1..4:-2.11417507353;GFI1B:-2.15348422062;KLF4:-2.21393068929;PDX1:-2.24955954679;ADNP_IRX_SIX_ZHX:-2.49032173364;CDC5L:-2.54061109569;LMO2:-2.6975593626;TEF:-3.06987263563 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11565-120D8;search_select_hide=table117:FF:11565-120D8 | |||
}} | }} | ||
Latest revision as of 18:09, 4 June 2020
| Name: | Mast cell, donor2 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12594 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8, 9, 10 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| Download raw sequence, BAM & CTSS | ||||||||||||||
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| RNA-Seq Accession numbers | ||||||||||||||||||||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12594
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12594
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.191 |
| 10 | 10 | 0.395 |
| 100 | 100 | 0.203 |
| 101 | 101 | 0.421 |
| 102 | 102 | 0.807 |
| 103 | 103 | 0.405 |
| 104 | 104 | 0.859 |
| 105 | 105 | 0.228 |
| 106 | 106 | 0.318 |
| 107 | 107 | 0.0331 |
| 108 | 108 | 0.156 |
| 109 | 109 | 0.868 |
| 11 | 11 | 0.42 |
| 110 | 110 | 0.269 |
| 111 | 111 | 0.191 |
| 112 | 112 | 0.731 |
| 113 | 113 | 0.505 |
| 114 | 114 | 0.127 |
| 115 | 115 | 0.717 |
| 116 | 116 | 0.0922 |
| 117 | 117 | 0.0898 |
| 118 | 118 | 0.322 |
| 119 | 119 | 0.164 |
| 12 | 12 | 0.604 |
| 120 | 120 | 0.0462 |
| 121 | 121 | 0.153 |
| 122 | 122 | 0.243 |
| 123 | 123 | 0.256 |
| 124 | 124 | 0.0247 |
| 125 | 125 | 0.249 |
| 126 | 126 | 0.295 |
| 127 | 127 | 0.771 |
| 128 | 128 | 0.774 |
| 129 | 129 | 0.0125 |
| 13 | 13 | 0.462 |
| 130 | 130 | 0.51 |
| 131 | 131 | 0.943 |
| 132 | 132 | 0.0623 |
| 133 | 133 | 0.0883 |
| 134 | 134 | 0.438 |
| 135 | 135 | 0.792 |
| 136 | 136 | 0.175 |
| 137 | 137 | 0.0446 |
| 138 | 138 | 0.256 |
| 139 | 139 | 0.838 |
| 14 | 14 | 0.66 |
| 140 | 140 | 0.241 |
| 141 | 141 | 0.225 |
| 142 | 142 | 0.139 |
| 143 | 143 | 0.86 |
| 144 | 144 | 0.997 |
| 145 | 145 | 0.411 |
| 146 | 146 | 0.318 |
| 147 | 147 | 0.134 |
| 148 | 148 | 0.737 |
| 149 | 149 | 0.0858 |
| 15 | 15 | 0.637 |
| 150 | 150 | 0.706 |
| 151 | 151 | 0.495 |
| 152 | 152 | 0.0305 |
| 153 | 153 | 0.551 |
| 154 | 154 | 0.849 |
| 155 | 155 | 0.209 |
| 156 | 156 | 0.826 |
| 157 | 157 | 0.934 |
| 158 | 158 | 0.185 |
| 159 | 159 | 0.828 |
| 16 | 16 | 0.211 |
| 160 | 160 | 0.0642 |
| 161 | 161 | 0.448 |
| 162 | 162 | 0.0663 |
| 163 | 163 | 0.115 |
| 164 | 164 | 0.432 |
| 165 | 165 | 0.767 |
| 166 | 166 | 0.021 |
| 167 | 167 | 0.411 |
| 168 | 168 | 0.312 |
| 169 | 169 | 0.851 |
| 17 | 17 | 0.647 |
| 18 | 18 | 0.32 |
| 19 | 19 | 0.298 |
| 2 | 2 | 0.118 |
| 20 | 20 | 0.377 |
| 21 | 21 | 0.741 |
| 22 | 22 | 0.604 |
| 23 | 23 | 0.78 |
| 24 | 24 | 0.928 |
| 25 | 25 | 0.885 |
| 26 | 26 | 0.519 |
| 27 | 27 | 0.264 |
| 28 | 28 | 0.613 |
| 29 | 29 | 0.412 |
| 3 | 3 | 0.249 |
| 30 | 30 | 0.473 |
| 31 | 31 | 0.462 |
| 32 | 32 | 0.00582 |
| 33 | 33 | 0.825 |
| 34 | 34 | 0.835 |
| 35 | 35 | 0.175 |
| 36 | 36 | 0.893 |
| 37 | 37 | 0.47 |
| 38 | 38 | 0.77 |
| 39 | 39 | 0.717 |
| 4 | 4 | 0.641 |
| 40 | 40 | 0.647 |
| 41 | 41 | 0.372 |
| 42 | 42 | 0.248 |
| 43 | 43 | 0.467 |
| 44 | 44 | 0.111 |
| 45 | 45 | 0.757 |
| 46 | 46 | 0.418 |
| 47 | 47 | 0.319 |
| 48 | 48 | 0.208 |
| 49 | 49 | 0.498 |
| 5 | 5 | 0.779 |
| 50 | 50 | 0.921 |
| 51 | 51 | 0.968 |
| 52 | 52 | 0.905 |
| 53 | 53 | 0.961 |
| 54 | 54 | 0.951 |
| 55 | 55 | 0.65 |
| 56 | 56 | 0.53 |
| 57 | 57 | 0.0981 |
| 58 | 58 | 0.657 |
| 59 | 59 | 0.818 |
| 6 | 6 | 0.647 |
| 60 | 60 | 0.867 |
| 61 | 61 | 0.638 |
| 62 | 62 | 0.934 |
| 63 | 63 | 0.301 |
| 64 | 64 | 0.47 |
| 65 | 65 | 0.629 |
| 66 | 66 | 0.789 |
| 67 | 67 | 0.619 |
| 68 | 68 | 0.756 |
| 69 | 69 | 0.202 |
| 7 | 7 | 0.814 |
| 70 | 70 | 0.308 |
| 71 | 71 | 0.516 |
| 72 | 72 | 0.287 |
| 73 | 73 | 0.111 |
| 74 | 74 | 0.0125 |
| 75 | 75 | 0.738 |
| 76 | 76 | 0.878 |
| 77 | 77 | 0.0681 |
| 78 | 78 | 0.914 |
| 79 | 79 | 0.4 |
| 8 | 8 | 0.103 |
| 80 | 80 | 0.393 |
| 81 | 81 | 0.293 |
| 82 | 82 | 0.812 |
| 83 | 83 | 0.939 |
| 84 | 84 | 0.269 |
| 85 | 85 | 0.841 |
| 86 | 86 | 0.0741 |
| 87 | 87 | 0.471 |
| 88 | 88 | 0.53 |
| 89 | 89 | 0.0593 |
| 9 | 9 | 0.649 |
| 90 | 90 | 0.321 |
| 91 | 91 | 1 |
| 92 | 92 | 0.521 |
| 93 | 93 | 0.583 |
| 94 | 94 | 0.957 |
| 95 | 95 | 0.0966 |
| 96 | 96 | 0.455 |
| 97 | 97 | 0.79 |
| 98 | 98 | 0.496 |
| 99 | 99 | 4.37843e-5 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12594
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0000261 mast cell- heparinase treated sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0000151 (secretory cell)
0002371 (somatic cell)
0000766 (myeloid leukocyte)
0002274 (histamine secreting cell)
0000219 (motile cell)
0000163 (endocrine cell)
0000457 (biogenic amine secreting cell)
0000738 (leukocyte)
0000255 (eukaryotic cell)
0000097 (mast cell)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000260 (mast cell sample)
0000261 (mast cell- heparinase treated sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)
