FF:11799-124C8: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet= | |DRA_sample_Accession=CAGE@SAMD00004679 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |accession_numbers=CAGE;DRX008166;DRR009038;DRZ000463;DRZ001848;DRZ011813;DRZ013198 | ||
|ancestors_in_anatomy_facet= | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000766,CL:0000219,CL:0000325,CL:0000473,CL:0000234,CL:0000738,CL:0002087,CL:0000255,CL:0000576,CL:0000860,CL:0002057 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0011111 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252bCD16-%2520Monocytes%252c%2520donor2.CNhs13216.11799-124C8.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252bCD16-%2520Monocytes%252c%2520donor2.CNhs13216.11799-124C8.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252bCD16-%2520Monocytes%252c%2520donor2.CNhs13216.11799-124C8.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14%252bCD16-%2520Monocytes%252c%2520donor2.CNhs13216.11799-124C8.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14%252bCD16-%2520Monocytes%252c%2520donor2.CNhs13216.11799-124C8.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11799-124C8 | |id=FF:11799-124C8 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0011111 | ||
|is_obsolete= | |||
|library_id=CNhs13216 | |||
|library_id_phase_based=2:CNhs13216 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11799 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11799 | |||
|name=CD14+CD16- Monocytes, donor2 | |name=CD14+CD16- Monocytes, donor2 | ||
|namespace= | |namespace= | ||
| Line 42: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs13216,LSID1005,release012,COMPLETED | |profile_hcage=CNhs13216,LSID1005,release012,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=124 | |rna_box=124 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 79: | ||
|rna_weight_ug=2.2696 | |rna_weight_ug=2.2696 | ||
|sample_age=23 | |sample_age=23 | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 92: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;7.33917666195449e-223!GO:0043227;membrane-bound organelle;8.07823829071559e-161!GO:0043231;intracellular membrane-bound organelle;1.48400745352112e-160!GO:0043226;organelle;3.01752765502791e-147!GO:0043229;intracellular organelle;1.771254200196e-146!GO:0005737;cytoplasm;2.65389229333353e-142!GO:0044444;cytoplasmic part;1.12750896542669e-104!GO:0044422;organelle part;8.90419173380282e-94!GO:0044446;intracellular organelle part;4.98677253820635e-92!GO:0044237;cellular metabolic process;2.18178488841521e-82!GO:0044238;primary metabolic process;9.00991983754873e-80!GO:0043170;macromolecule metabolic process;2.82841113039877e-78!GO:0032991;macromolecular complex;9.46131683928629e-75!GO:0030529;ribonucleoprotein complex;2.4989080227586e-69!GO:0003723;RNA binding;7.08484901303111e-68!GO:0005634;nucleus;7.62037310417651e-65!GO:0044428;nuclear part;2.62380585897774e-58!GO:0043233;organelle lumen;8.94259320014421e-54!GO:0031974;membrane-enclosed lumen;8.94259320014421e-54!GO:0006412;translation;4.45546086833845e-51!GO:0005739;mitochondrion;1.30824619530917e-50!GO:0005515;protein binding;1.36310595688297e-49!GO:0019538;protein metabolic process;2.00028844739106e-49!GO:0033036;macromolecule localization;3.83502635077612e-48!GO:0015031;protein transport;2.59093632512267e-47!GO:0045184;establishment of protein localization;1.08309843628061e-46!GO:0044260;cellular macromolecule metabolic process;4.10853178529106e-46!GO:0044267;cellular protein metabolic process;4.27575277194411e-46!GO:0010467;gene expression;9.33612423699325e-46!GO:0008104;protein localization;5.01530747379992e-45!GO:0043283;biopolymer metabolic process;7.86445400500222e-45!GO:0006396;RNA processing;1.5228036958528e-42!GO:0031090;organelle membrane;2.93582272786466e-40!GO:0005840;ribosome;5.4835766783434e-39!GO:0009059;macromolecule biosynthetic process;6.31732403315932e-39!GO:0005829;cytosol;5.56589951943442e-38!GO:0016071;mRNA metabolic process;1.97381192278649e-37!GO:0043234;protein complex;1.44495304241372e-36!GO:0044429;mitochondrial part;2.66210517832423e-36!GO:0031981;nuclear lumen;8.02650712641103e-36!GO:0009058;biosynthetic process;1.44255424899005e-35!GO:0044249;cellular biosynthetic process;3.38962882885103e-35!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.71203622846819e-35!GO:0003735;structural constituent of ribosome;5.2671383407951e-35!GO:0031967;organelle envelope;5.88787346213115e-35!GO:0031975;envelope;1.28001772514671e-34!GO:0008380;RNA splicing;2.94118836580492e-34!GO:0006397;mRNA processing;1.99113484337141e-32!GO:0033279;ribosomal subunit;7.48819183373625e-32!GO:0006886;intracellular protein transport;9.34041763356434e-30!GO:0046907;intracellular transport;7.6137934016189e-29!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.50283884787417e-27!GO:0016043;cellular component organization and biogenesis;7.71688280306174e-27!GO:0005740;mitochondrial envelope;1.74140584840506e-25!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.8092464923102e-25!GO:0065003;macromolecular complex assembly;3.15652787485688e-25!GO:0005681;spliceosome;4.51238143208953e-25!GO:0031966;mitochondrial membrane;2.20674206691721e-24!GO:0003676;nucleic acid binding;8.30347758015546e-24!GO:0005654;nucleoplasm;9.80844415658863e-24!GO:0019866;organelle inner membrane;1.43030266025966e-23!GO:0044445;cytosolic part;3.90936915875263e-23!GO:0051649;establishment of cellular localization;8.95467129773712e-22!GO:0006119;oxidative phosphorylation;1.87884447042758e-21!GO:0022607;cellular component assembly;2.5274124864384e-21!GO:0051641;cellular localization;2.6663762999185e-21!GO:0005743;mitochondrial inner membrane;5.73940649507757e-21!GO:0016070;RNA metabolic process;6.00661055424153e-21!GO:0000166;nucleotide binding;1.98608040435302e-20!GO:0006915;apoptosis;2.15463120611513e-20!GO:0012501;programmed cell death;2.43610854607244e-20!GO:0044451;nucleoplasm part;1.19623525786738e-19!GO:0022618;protein-RNA complex assembly;3.79260804271532e-19!GO:0008219;cell death;8.24067974600644e-19!GO:0016265;death;8.24067974600644e-19!GO:0006512;ubiquitin cycle;2.45520335790002e-18!GO:0044265;cellular macromolecule catabolic process;4.40897740775597e-18!GO:0043412;biopolymer modification;7.33271950237722e-18!GO:0044455;mitochondrial membrane part;1.37412518846385e-17!GO:0008134;transcription factor binding;1.99904117506694e-17!GO:0006996;organelle organization and biogenesis;5.15422920743716e-17!GO:0015935;small ribosomal subunit;8.07505312261618e-17!GO:0006605;protein targeting;2.61462684056854e-16!GO:0016192;vesicle-mediated transport;2.61462684056854e-16!GO:0006464;protein modification process;5.92385566466865e-16!GO:0015934;large ribosomal subunit;6.10391905181542e-16!GO:0016874;ligase activity;1.21771545847507e-15!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.37896808283645e-15!GO:0044248;cellular catabolic process;2.41830597224503e-15!GO:0016817;hydrolase activity, acting on acid anhydrides;2.88478901747089e-15!GO:0016462;pyrophosphatase activity;2.98644722442398e-15!GO:0006259;DNA metabolic process;4.53515205938289e-15!GO:0008135;translation factor activity, nucleic acid binding;4.9482003802057e-15!GO:0048770;pigment granule;6.14279599068087e-15!GO:0042470;melanosome;6.14279599068087e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);8.29310447019043e-15!GO:0017111;nucleoside-triphosphatase activity;9.14925968107703e-15!GO:0019941;modification-dependent protein catabolic process;1.02527545137038e-14!GO:0043632;modification-dependent macromolecule catabolic process;1.02527545137038e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;1.11895296026058e-14!GO:0016604;nuclear body;1.44911296027276e-14!GO:0006511;ubiquitin-dependent protein catabolic process;1.73605613715862e-14!GO:0005746;mitochondrial respiratory chain;2.07651113049609e-14!GO:0044257;cellular protein catabolic process;2.1365186102392e-14!GO:0032553;ribonucleotide binding;2.36528412924244e-14!GO:0032555;purine ribonucleotide binding;2.36528412924244e-14!GO:0043285;biopolymer catabolic process;3.36830622262139e-14!GO:0017076;purine nucleotide binding;4.03463255460754e-14!GO:0043687;post-translational protein modification;6.51708721839283e-14!GO:0000502;proteasome complex (sensu Eukaryota);6.61965308534025e-14!GO:0009057;macromolecule catabolic process;1.12724994958296e-13!GO:0006913;nucleocytoplasmic transport;1.1674794430378e-13!GO:0006457;protein folding;1.86595593280543e-13!GO:0031980;mitochondrial lumen;1.92680357421404e-13!GO:0005759;mitochondrial matrix;1.92680357421404e-13!GO:0051186;cofactor metabolic process;2.08758357907462e-13!GO:0051169;nuclear transport;2.23858114338547e-13!GO:0042981;regulation of apoptosis;2.69653209985094e-13!GO:0012505;endomembrane system;3.25714140915174e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);3.52746829183557e-13!GO:0003743;translation initiation factor activity;3.75671873289788e-13!GO:0006413;translational initiation;4.14311782645998e-13!GO:0050136;NADH dehydrogenase (quinone) activity;4.14311782645998e-13!GO:0003954;NADH dehydrogenase activity;4.14311782645998e-13!GO:0008137;NADH dehydrogenase (ubiquinone) activity;4.14311782645998e-13!GO:0043067;regulation of programmed cell death;4.72901176755418e-13!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;8.0194155219934e-13!GO:0016607;nuclear speck;8.40320232844817e-13!GO:0005773;vacuole;1.02030995622195e-12!GO:0005730;nucleolus;2.26700625593998e-12!GO:0042775;organelle ATP synthesis coupled electron transport;1.06891460678639e-11!GO:0042773;ATP synthesis coupled electron transport;1.06891460678639e-11!GO:0000323;lytic vacuole;1.132085851449e-11!GO:0005764;lysosome;1.132085851449e-11!GO:0030964;NADH dehydrogenase complex (quinone);1.98425261518063e-11!GO:0045271;respiratory chain complex I;1.98425261518063e-11!GO:0005747;mitochondrial respiratory chain complex I;1.98425261518063e-11!GO:0007243;protein kinase cascade;2.09513390339251e-11!GO:0006732;coenzyme metabolic process;2.79577031959441e-11!GO:0005794;Golgi apparatus;3.21753031218932e-11!GO:0006446;regulation of translational initiation;3.41180588284049e-11!GO:0005768;endosome;3.42414088958018e-11!GO:0006793;phosphorus metabolic process;4.26626863052293e-11!GO:0006796;phosphate metabolic process;4.26626863052293e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;5.0874367581637e-11!GO:0000398;nuclear mRNA splicing, via spliceosome;6.70166433618666e-11!GO:0000375;RNA splicing, via transesterification reactions;6.70166433618666e-11!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;6.70166433618666e-11!GO:0003712;transcription cofactor activity;7.27024972638901e-11!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;7.65859166960532e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;8.69385597479159e-11!GO:0016787;hydrolase activity;9.44143627799949e-11!GO:0005524;ATP binding;1.12919639971512e-10!GO:0030163;protein catabolic process;1.2831171158546e-10!GO:0050794;regulation of cellular process;1.29834856364274e-10!GO:0032559;adenyl ribonucleotide binding;1.61236844378111e-10!GO:0005783;endoplasmic reticulum;1.69314009308725e-10!GO:0007249;I-kappaB kinase/NF-kappaB cascade;2.01932528247912e-10!GO:0051246;regulation of protein metabolic process;2.07871284830461e-10!GO:0017038;protein import;2.88309654491297e-10!GO:0030554;adenyl nucleotide binding;3.20037135720955e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;4.39144831982043e-10!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;6.10539141596148e-10!GO:0043228;non-membrane-bound organelle;7.41880166426782e-10!GO:0043232;intracellular non-membrane-bound organelle;7.41880166426782e-10!GO:0048193;Golgi vesicle transport;1.26256123423393e-09!GO:0006974;response to DNA damage stimulus;1.27330990940318e-09!GO:0005635;nuclear envelope;1.30198779278866e-09!GO:0016310;phosphorylation;1.37222433351976e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.40752659566288e-09!GO:0008639;small protein conjugating enzyme activity;1.98490060803665e-09!GO:0019829;cation-transporting ATPase activity;2.48457020458781e-09!GO:0009259;ribonucleotide metabolic process;2.89745627876748e-09!GO:0065009;regulation of a molecular function;2.94909967122273e-09!GO:0009056;catabolic process;3.24825822197088e-09!GO:0042623;ATPase activity, coupled;4.40609148953995e-09!GO:0004842;ubiquitin-protein ligase activity;4.40846272765193e-09!GO:0015986;ATP synthesis coupled proton transport;4.61462006057489e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;4.61462006057489e-09!GO:0006163;purine nucleotide metabolic process;4.62587754310076e-09!GO:0009150;purine ribonucleotide metabolic process;5.12436043035864e-09!GO:0048523;negative regulation of cellular process;5.21852411888282e-09!GO:0051082;unfolded protein binding;5.29874945762448e-09!GO:0019787;small conjugating protein ligase activity;5.44606942319715e-09!GO:0006164;purine nucleotide biosynthetic process;5.49293954078244e-09!GO:0009152;purine ribonucleotide biosynthetic process;5.52683740711966e-09!GO:0016887;ATPase activity;6.40260956218932e-09!GO:0009260;ribonucleotide biosynthetic process;8.10829402296085e-09!GO:0044432;endoplasmic reticulum part;9.5386745606661e-09!GO:0007242;intracellular signaling cascade;1.04725834503699e-08!GO:0006325;establishment and/or maintenance of chromatin architecture;1.12786643616341e-08!GO:0044453;nuclear membrane part;1.3951972417152e-08!GO:0015078;hydrogen ion transmembrane transporter activity;1.43682617602277e-08!GO:0005761;mitochondrial ribosome;1.49634585790442e-08!GO:0000313;organellar ribosome;1.49634585790442e-08!GO:0043069;negative regulation of programmed cell death;1.62281080346112e-08!GO:0043066;negative regulation of apoptosis;1.83476735979367e-08!GO:0051170;nuclear import;1.95648648603422e-08!GO:0006417;regulation of translation;2.48685790141064e-08!GO:0019222;regulation of metabolic process;2.93922001915696e-08!GO:0006366;transcription from RNA polymerase II promoter;2.99853110293213e-08!GO:0008026;ATP-dependent helicase activity;3.00043615344196e-08!GO:0031965;nuclear membrane;3.12886820581526e-08!GO:0006323;DNA packaging;3.32610103125701e-08!GO:0009055;electron carrier activity;3.52282788029977e-08!GO:0006606;protein import into nucleus;3.84691742720735e-08!GO:0008565;protein transporter activity;4.23516139522643e-08!GO:0006754;ATP biosynthetic process;4.90996244774217e-08!GO:0006753;nucleoside phosphate metabolic process;4.90996244774217e-08!GO:0042254;ribosome biogenesis and assembly;4.90996244774217e-08!GO:0016568;chromatin modification;5.93673968538116e-08!GO:0016469;proton-transporting two-sector ATPase complex;6.19008747238565e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;6.26106949304388e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;6.26106949304388e-08!GO:0009142;nucleoside triphosphate biosynthetic process;6.54447252470306e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;6.54447252470306e-08!GO:0003713;transcription coactivator activity;6.81854599459649e-08!GO:0004386;helicase activity;7.56075725496615e-08!GO:0050657;nucleic acid transport;8.39650296015123e-08!GO:0051236;establishment of RNA localization;8.39650296015123e-08!GO:0050658;RNA transport;8.39650296015123e-08!GO:0009060;aerobic respiration;9.47906045371917e-08!GO:0051188;cofactor biosynthetic process;1.08553012093738e-07!GO:0006403;RNA localization;1.10256793685173e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.23241133648069e-07!GO:0009144;purine nucleoside triphosphate metabolic process;1.23241133648069e-07!GO:0009199;ribonucleoside triphosphate metabolic process;1.23804914006043e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.24157371115194e-07!GO:0005770;late endosome;1.6136147946666e-07!GO:0046034;ATP metabolic process;1.69672545387022e-07!GO:0048519;negative regulation of biological process;1.71864933571816e-07!GO:0006916;anti-apoptosis;1.82481955818538e-07!GO:0006281;DNA repair;2.33732200699933e-07!GO:0009141;nucleoside triphosphate metabolic process;2.43464244711762e-07!GO:0005839;proteasome core complex (sensu Eukaryota);2.48826715333564e-07!GO:0050789;regulation of biological process;2.51876728767429e-07!GO:0016881;acid-amino acid ligase activity;2.86349679959937e-07!GO:0007049;cell cycle;2.90335140677068e-07!GO:0006461;protein complex assembly;3.44569798576169e-07!GO:0005643;nuclear pore;3.7659902541833e-07!GO:0009615;response to virus;4.8621120609036e-07!GO:0008047;enzyme activator activity;5.17481892006213e-07!GO:0065002;intracellular protein transport across a membrane;5.32465336235753e-07!GO:0015077;monovalent inorganic cation transmembrane transporter activity;6.20875313380769e-07!GO:0006950;response to stress;6.64037543947659e-07!GO:0031326;regulation of cellular biosynthetic process;6.77114365873023e-07!GO:0051276;chromosome organization and biogenesis;7.21351770294301e-07!GO:0031324;negative regulation of cellular metabolic process;7.5004527450737e-07!GO:0042175;nuclear envelope-endoplasmic reticulum network;7.80247235232821e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;7.88997456357564e-07!GO:0005789;endoplasmic reticulum membrane;7.96479296117609e-07!GO:0009108;coenzyme biosynthetic process;1.05298577874879e-06!GO:0016564;transcription repressor activity;1.08092883832021e-06!GO:0006399;tRNA metabolic process;1.15138403558494e-06!GO:0045333;cellular respiration;1.30389741902398e-06!GO:0005793;ER-Golgi intermediate compartment;1.35725974202712e-06!GO:0004298;threonine endopeptidase activity;1.40336800789518e-06!GO:0031323;regulation of cellular metabolic process;1.78513967519573e-06!GO:0051726;regulation of cell cycle;1.85715261161514e-06!GO:0043566;structure-specific DNA binding;1.91592014084944e-06!GO:0051028;mRNA transport;2.12983008569635e-06!GO:0005525;GTP binding;2.32692298357974e-06!GO:0000074;regulation of progression through cell cycle;2.43975511395518e-06!GO:0030532;small nuclear ribonucleoprotein complex;2.48461178976381e-06!GO:0009889;regulation of biosynthetic process;2.49823188173584e-06!GO:0044440;endosomal part;2.49952254549933e-06!GO:0010008;endosome membrane;2.49952254549933e-06!GO:0048475;coated membrane;3.16070820690388e-06!GO:0030117;membrane coat;3.16070820690388e-06!GO:0005774;vacuolar membrane;3.23252788215947e-06!GO:0009719;response to endogenous stimulus;3.27285170943569e-06!GO:0006752;group transfer coenzyme metabolic process;3.32403865126981e-06!GO:0043065;positive regulation of apoptosis;3.35783721583561e-06!GO:0009967;positive regulation of signal transduction;3.57129292709797e-06!GO:0050790;regulation of catalytic activity;3.71082249513187e-06!GO:0032446;protein modification by small protein conjugation;4.05588844691626e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;4.09453010929442e-06!GO:0045259;proton-transporting ATP synthase complex;4.17518584271341e-06!GO:0043068;positive regulation of programmed cell death;4.59198325173858e-06!GO:0030120;vesicle coat;5.31246240506412e-06!GO:0030662;coated vesicle membrane;5.31246240506412e-06!GO:0006099;tricarboxylic acid cycle;5.31246240506412e-06!GO:0046356;acetyl-CoA catabolic process;5.31246240506412e-06!GO:0016740;transferase activity;5.49973270768569e-06!GO:0016563;transcription activator activity;5.73718157018791e-06!GO:0007264;small GTPase mediated signal transduction;5.82121691874931e-06!GO:0046930;pore complex;7.11032025434953e-06!GO:0016567;protein ubiquitination;7.50274920780973e-06!GO:0045786;negative regulation of progression through cell cycle;7.82722491771635e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;8.99840822141204e-06!GO:0003697;single-stranded DNA binding;9.66782877034033e-06!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;9.86242447091566e-06!GO:0051187;cofactor catabolic process;1.25605249561991e-05!GO:0044437;vacuolar part;1.27601601466493e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.45596351483083e-05!GO:0006084;acetyl-CoA metabolic process;1.56683879335848e-05!GO:0006917;induction of apoptosis;1.66543244394805e-05!GO:0016072;rRNA metabolic process;1.77661391285116e-05!GO:0003924;GTPase activity;1.83100972908404e-05!GO:0010468;regulation of gene expression;1.83506295663924e-05!GO:0006401;RNA catabolic process;1.98406391683883e-05!GO:0005765;lysosomal membrane;1.98406391683883e-05!GO:0009892;negative regulation of metabolic process;2.07893522504064e-05!GO:0000245;spliceosome assembly;2.12969064555311e-05!GO:0006888;ER to Golgi vesicle-mediated transport;2.18018891177947e-05!GO:0065007;biological regulation;2.32747362170333e-05!GO:0016481;negative regulation of transcription;2.33939044068081e-05!GO:0006613;cotranslational protein targeting to membrane;2.39978084972016e-05!GO:0012502;induction of programmed cell death;2.50781572361738e-05!GO:0008654;phospholipid biosynthetic process;2.5162256414802e-05!GO:0007005;mitochondrion organization and biogenesis;2.5162256414802e-05!GO:0006364;rRNA processing;2.61132553820619e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;2.61977360600266e-05!GO:0019899;enzyme binding;2.62571104784266e-05!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.8518999467906e-05!GO:0004812;aminoacyl-tRNA ligase activity;2.8518999467906e-05!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.8518999467906e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;2.98824104441738e-05!GO:0048522;positive regulation of cellular process;3.30410168633213e-05!GO:0009109;coenzyme catabolic process;3.79825734731219e-05!GO:0016197;endosome transport;3.92903044336021e-05!GO:0032561;guanyl ribonucleotide binding;3.94738889666771e-05!GO:0019001;guanyl nucleotide binding;3.94738889666771e-05!GO:0043038;amino acid activation;4.68986572267568e-05!GO:0006418;tRNA aminoacylation for protein translation;4.68986572267568e-05!GO:0043039;tRNA aminoacylation;4.68986572267568e-05!GO:0000151;ubiquitin ligase complex;4.81633706875289e-05!GO:0009117;nucleotide metabolic process;4.99411253425522e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;5.69960922886117e-05!GO:0015399;primary active transmembrane transporter activity;5.69960922886117e-05!GO:0016779;nucleotidyltransferase activity;8.59539753138834e-05!GO:0006818;hydrogen transport;8.72328972504601e-05!GO:0003724;RNA helicase activity;8.91423692025085e-05!GO:0016044;membrane organization and biogenesis;9.09599281093277e-05!GO:0015992;proton transport;9.41128001054994e-05!GO:0051336;regulation of hydrolase activity;0.000102057737488164!GO:0044262;cellular carbohydrate metabolic process;0.000103436144818857!GO:0031982;vesicle;0.000103436144818857!GO:0031902;late endosome membrane;0.000103506044821253!GO:0022402;cell cycle process;0.000105392281806548!GO:0005096;GTPase activator activity;0.000106446054322204!GO:0051168;nuclear export;0.000112487772640726!GO:0007034;vacuolar transport;0.000117936101607045!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000131967367950252!GO:0006612;protein targeting to membrane;0.000142008813320024!GO:0005798;Golgi-associated vesicle;0.000147853475252329!GO:0065004;protein-DNA complex assembly;0.000149815249850502!GO:0006350;transcription;0.000165518661623072!GO:0031252;leading edge;0.000176163995734273!GO:0005885;Arp2/3 protein complex;0.000184054078604204!GO:0022890;inorganic cation transmembrane transporter activity;0.000212565702265717!GO:0005769;early endosome;0.000214244226410415!GO:0005694;chromosome;0.000237692085182308!GO:0004674;protein serine/threonine kinase activity;0.000245554670749788!GO:0006091;generation of precursor metabolites and energy;0.000257694451606772!GO:0048518;positive regulation of biological process;0.000259852642705486!GO:0006333;chromatin assembly or disassembly;0.000293912415235478!GO:0044431;Golgi apparatus part;0.000339383213801881!GO:0008234;cysteine-type peptidase activity;0.00035188671601527!GO:0006402;mRNA catabolic process;0.000366989655446805!GO:0031988;membrane-bound vesicle;0.000388265220116825!GO:0046822;regulation of nucleocytoplasmic transport;0.000390602448232522!GO:0031410;cytoplasmic vesicle;0.000412540524146015!GO:0043021;ribonucleoprotein binding;0.000424314102553758!GO:0030695;GTPase regulator activity;0.000435969867832184!GO:0003714;transcription corepressor activity;0.000435993490994005!GO:0032940;secretion by cell;0.000477255653229444!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.000506349550958224!GO:0051427;hormone receptor binding;0.000555071638960581!GO:0043623;cellular protein complex assembly;0.000595711984286993!GO:0005667;transcription factor complex;0.000646432854199026!GO:0003729;mRNA binding;0.000663368098192812!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000676046671241049!GO:0016491;oxidoreductase activity;0.000694655700467071!GO:0009607;response to biotic stimulus;0.000743018113831068!GO:0008186;RNA-dependent ATPase activity;0.000793294348600763!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000833055724865726!GO:0043492;ATPase activity, coupled to movement of substances;0.00088974610393616!GO:0016023;cytoplasmic membrane-bound vesicle;0.000890967789908004!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000923862238195773!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000929781740710242!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000939203784884914!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000949141019595489!GO:0007041;lysosomal transport;0.00095924332286935!GO:0035257;nuclear hormone receptor binding;0.000977587573024423!GO:0016363;nuclear matrix;0.00100064982869137!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0010225691229102!GO:0003690;double-stranded DNA binding;0.00110106431549651!GO:0005741;mitochondrial outer membrane;0.00111065318458708!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00112965323038824!GO:0051090;regulation of transcription factor activity;0.00114735662305217!GO:0007265;Ras protein signal transduction;0.00114761849108394!GO:0008632;apoptotic program;0.00114944772046431!GO:0009966;regulation of signal transduction;0.00125035149514167!GO:0000785;chromatin;0.00125556617507561!GO:0019843;rRNA binding;0.00129496066978347!GO:0015980;energy derivation by oxidation of organic compounds;0.00131464182222359!GO:0007040;lysosome organization and biogenesis;0.00135514784418757!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00143626266313085!GO:0045454;cell redox homeostasis;0.00154945246502245!GO:0044427;chromosomal part;0.00170450144737052!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00189216861635267!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00189216861635267!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00189216861635267!GO:0030384;phosphoinositide metabolic process;0.00194637130156414!GO:0005762;mitochondrial large ribosomal subunit;0.00194943940271783!GO:0000315;organellar large ribosomal subunit;0.00194943940271783!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.00205835408918878!GO:0006650;glycerophospholipid metabolic process;0.0021299460224273!GO:0005637;nuclear inner membrane;0.00213656706890853!GO:0004004;ATP-dependent RNA helicase activity;0.00215595976814076!GO:0043087;regulation of GTPase activity;0.002205499694774!GO:0006897;endocytosis;0.0022874581385254!GO:0010324;membrane invagination;0.0022874581385254!GO:0030867;rough endoplasmic reticulum membrane;0.00250058515833726!GO:0046474;glycerophospholipid biosynthetic process;0.00250058515833726!GO:0009165;nucleotide biosynthetic process;0.00263357302986539!GO:0000287;magnesium ion binding;0.00268095015338008!GO:0005813;centrosome;0.00271936431729792!GO:0008270;zinc ion binding;0.00279996103142617!GO:0007050;cell cycle arrest;0.00281200280704263!GO:0005083;small GTPase regulator activity;0.00288135917373095!GO:0031968;organelle outer membrane;0.00294736269726551!GO:0033116;ER-Golgi intermediate compartment membrane;0.00303970729916499!GO:0003725;double-stranded RNA binding;0.00303970729916499!GO:0030041;actin filament polymerization;0.00317965686617891!GO:0006260;DNA replication;0.00329379925269657!GO:0001816;cytokine production;0.00338217013041023!GO:0046489;phosphoinositide biosynthetic process;0.00342059140856838!GO:0051223;regulation of protein transport;0.00377358787301927!GO:0019867;outer membrane;0.00385583739382687!GO:0043433;negative regulation of transcription factor activity;0.00406449454108888!GO:0006414;translational elongation;0.00406720530089697!GO:0007033;vacuole organization and biogenesis;0.00423167552095157!GO:0033157;regulation of intracellular protein transport;0.00458247415408963!GO:0042306;regulation of protein import into nucleus;0.00458247415408963!GO:0004177;aminopeptidase activity;0.00473496403100988!GO:0046467;membrane lipid biosynthetic process;0.0047783979201865!GO:0006611;protein export from nucleus;0.00484183935924063!GO:0043681;protein import into mitochondrion;0.00485389243844656!GO:0019318;hexose metabolic process;0.00496323870659506!GO:0051252;regulation of RNA metabolic process;0.00496437903939084!GO:0006891;intra-Golgi vesicle-mediated transport;0.00507306030804682!GO:0001726;ruffle;0.00522525030886587!GO:0000139;Golgi membrane;0.00528548196179088!GO:0043488;regulation of mRNA stability;0.00549310615379461!GO:0043487;regulation of RNA stability;0.00549310615379461!GO:0032774;RNA biosynthetic process;0.00554871989189836!GO:0045449;regulation of transcription;0.00555827697344382!GO:0045045;secretory pathway;0.00567671418134004!GO:0006351;transcription, DNA-dependent;0.0057320087667494!GO:0046914;transition metal ion binding;0.00580818366320873!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00581912129805611!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00581912129805611!GO:0031072;heat shock protein binding;0.00587146078184076!GO:0030658;transport vesicle membrane;0.00588396783880244!GO:0048500;signal recognition particle;0.00590457723792439!GO:0005996;monosaccharide metabolic process;0.00596939833589274!GO:0002376;immune system process;0.00647622721292319!GO:0046983;protein dimerization activity;0.0065278925258029!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.00672350605050834!GO:0000118;histone deacetylase complex;0.00692364406320631!GO:0005788;endoplasmic reticulum lumen;0.00705449163433685!GO:0006672;ceramide metabolic process;0.00720085323367015!GO:0006643;membrane lipid metabolic process;0.00720727420408877!GO:0030118;clathrin coat;0.00731984797617657!GO:0004185;serine carboxypeptidase activity;0.00821298437413783!GO:0016251;general RNA polymerase II transcription factor activity;0.00822922014985577!GO:0005815;microtubule organizing center;0.00822922014985577!GO:0043281;regulation of caspase activity;0.00831192077735077!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0083515669759706!GO:0045047;protein targeting to ER;0.0083515669759706!GO:0032318;regulation of Ras GTPase activity;0.00843331713844443!GO:0005975;carbohydrate metabolic process;0.00846378522231037!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0085652741456676!GO:0019883;antigen processing and presentation of endogenous antigen;0.00867605476264775!GO:0006383;transcription from RNA polymerase III promoter;0.00868098721159918!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00874704342260935!GO:0046519;sphingoid metabolic process;0.0088671314233395!GO:0008656;caspase activator activity;0.00932496056242956!GO:0051539;4 iron, 4 sulfur cluster binding;0.00936174390612438!GO:0018193;peptidyl-amino acid modification;0.00947120529397799!GO:0005099;Ras GTPase activator activity;0.00949832045585502!GO:0015631;tubulin binding;0.00952431294480543!GO:0008312;7S RNA binding;0.00966994618012188!GO:0006914;autophagy;0.00969248372537956!GO:0030663;COPI coated vesicle membrane;0.00975845790887156!GO:0030126;COPI vesicle coat;0.00975845790887156!GO:0007006;mitochondrial membrane organization and biogenesis;0.00975845790887156!GO:0006352;transcription initiation;0.00980514997866466!GO:0009893;positive regulation of metabolic process;0.0102564977470626!GO:0030036;actin cytoskeleton organization and biogenesis;0.0108135753815792!GO:0015036;disulfide oxidoreductase activity;0.0108135753815792!GO:0042613;MHC class II protein complex;0.0109447962089136!GO:0048487;beta-tubulin binding;0.0109703473348822!GO:0042802;identical protein binding;0.0109703473348822!GO:0004197;cysteine-type endopeptidase activity;0.0110407573037698!GO:0042990;regulation of transcription factor import into nucleus;0.0111420394499191!GO:0042991;transcription factor import into nucleus;0.0111420394499191!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0111774466156825!GO:0045892;negative regulation of transcription, DNA-dependent;0.0113212104214111!GO:0003746;translation elongation factor activity;0.0113212104214111!GO:0048002;antigen processing and presentation of peptide antigen;0.0114959614967319!GO:0045113;regulation of integrin biosynthetic process;0.0115286746790606!GO:0045112;integrin biosynthetic process;0.0115286746790606!GO:0016853;isomerase activity;0.0115888271969623!GO:0031625;ubiquitin protein ligase binding;0.0116189436186223!GO:0000314;organellar small ribosomal subunit;0.0118706991200638!GO:0005763;mitochondrial small ribosomal subunit;0.0118706991200638!GO:0048468;cell development;0.0118940074115519!GO:0046483;heterocycle metabolic process;0.0120748914407343!GO:0016301;kinase activity;0.0123983740835894!GO:0006607;NLS-bearing substrate import into nucleus;0.0124926706699592!GO:0005684;U2-dependent spliceosome;0.0125686304463015!GO:0005048;signal sequence binding;0.0127707706358529!GO:0030137;COPI-coated vesicle;0.0133275218855187!GO:0051098;regulation of binding;0.0133275218855187!GO:0051920;peroxiredoxin activity;0.0135424991572946!GO:0030660;Golgi-associated vesicle membrane;0.0136583672949822!GO:0008033;tRNA processing;0.0139725854596662!GO:0006626;protein targeting to mitochondrion;0.0148058011399528!GO:0016788;hydrolase activity, acting on ester bonds;0.0148058011399528!GO:0003899;DNA-directed RNA polymerase activity;0.0149013242559566!GO:0051338;regulation of transferase activity;0.0150184299896446!GO:0004518;nuclease activity;0.015172717103903!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0154762969914209!GO:0000209;protein polyubiquitination;0.0155258184471983!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0157245688356431!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0157771605570334!GO:0031497;chromatin assembly;0.0159384053260176!GO:0030176;integral to endoplasmic reticulum membrane;0.0160100935481747!GO:0016859;cis-trans isomerase activity;0.0160442765711528!GO:0033367;protein localization in mast cell secretory granule;0.0160470089692165!GO:0033365;protein localization in organelle;0.0160470089692165!GO:0033371;T cell secretory granule organization and biogenesis;0.0160470089692165!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.0160470089692165!GO:0033375;protease localization in T cell secretory granule;0.0160470089692165!GO:0042629;mast cell granule;0.0160470089692165!GO:0033377;maintenance of protein localization in T cell secretory granule;0.0160470089692165!GO:0033364;mast cell secretory granule organization and biogenesis;0.0160470089692165!GO:0033380;granzyme B localization in T cell secretory granule;0.0160470089692165!GO:0033379;maintenance of protease localization in T cell secretory granule;0.0160470089692165!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.0160470089692165!GO:0033368;protease localization in mast cell secretory granule;0.0160470089692165!GO:0033366;protein localization in secretory granule;0.0160470089692165!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.0160470089692165!GO:0033374;protein localization in T cell secretory granule;0.0160470089692165!GO:0006497;protein amino acid lipidation;0.0160599998426376!GO:0030258;lipid modification;0.0163299692657375!GO:0019377;glycolipid catabolic process;0.0165382445342522!GO:0002467;germinal center formation;0.0166971001421702!GO:0019882;antigen processing and presentation;0.0168338208105321!GO:0006740;NADPH regeneration;0.0173214932989139!GO:0006098;pentose-phosphate shunt;0.0173214932989139!GO:0043022;ribosome binding;0.0173867586112163!GO:0043300;regulation of leukocyte degranulation;0.0173998475245156!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0178046609651011!GO:0043549;regulation of kinase activity;0.0180841162552839!GO:0005057;receptor signaling protein activity;0.0181612995269509!GO:0006919;caspase activation;0.0182490728976631!GO:0017091;AU-rich element binding;0.0182824132037342!GO:0050779;RNA destabilization;0.0182824132037342!GO:0000289;poly(A) tail shortening;0.0182824132037342!GO:0046966;thyroid hormone receptor binding;0.0186721363211896!GO:0030027;lamellipodium;0.0191072703223304!GO:0005484;SNAP receptor activity;0.0193762168060378!GO:0004218;cathepsin S activity;0.0194432013436538!GO:0032763;regulation of mast cell cytokine production;0.019643106917787!GO:0032762;mast cell cytokine production;0.019643106917787!GO:0006334;nucleosome assembly;0.0198175149561469!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0201852454398638!GO:0010257;NADH dehydrogenase complex assembly;0.0201852454398638!GO:0033108;mitochondrial respiratory chain complex assembly;0.0201852454398638!GO:0016584;nucleosome positioning;0.0202515298239349!GO:0006405;RNA export from nucleus;0.0204883640710507!GO:0016791;phosphoric monoester hydrolase activity;0.0206564655256857!GO:0043280;positive regulation of caspase activity;0.0207153881832714!GO:0015923;mannosidase activity;0.0208058802657772!GO:0051707;response to other organism;0.0208358221051437!GO:0003711;transcription elongation regulator activity;0.021066085081383!GO:0005869;dynactin complex;0.0210735650974098!GO:0051789;response to protein stimulus;0.0210846791180563!GO:0006986;response to unfolded protein;0.0210846791180563!GO:0002274;myeloid leukocyte activation;0.0212276825733941!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0212276825733941!GO:0015002;heme-copper terminal oxidase activity;0.0212276825733941!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0212276825733941!GO:0004129;cytochrome-c oxidase activity;0.0212276825733941!GO:0004722;protein serine/threonine phosphatase activity;0.0213367258721184!GO:0051540;metal cluster binding;0.0218873326061427!GO:0051536;iron-sulfur cluster binding;0.0218873326061427!GO:0008017;microtubule binding;0.0220329681476845!GO:0008637;apoptotic mitochondrial changes;0.0221829251317524!GO:0005665;DNA-directed RNA polymerase II, core complex;0.022489194934555!GO:0051235;maintenance of localization;0.022529086497301!GO:0045893;positive regulation of transcription, DNA-dependent;0.0226172170153563!GO:0008333;endosome to lysosome transport;0.0226674191894177!GO:0006261;DNA-dependent DNA replication;0.0226674191894177!GO:0006213;pyrimidine nucleoside metabolic process;0.0229069398151566!GO:0007259;JAK-STAT cascade;0.0229528182801931!GO:0006458;'de novo' protein folding;0.0229930157189144!GO:0051084;'de novo' posttranslational protein folding;0.0229930157189144!GO:0001817;regulation of cytokine production;0.02378630518524!GO:0030133;transport vesicle;0.024480706721061!GO:0050811;GABA receptor binding;0.0247851692566701!GO:0045941;positive regulation of transcription;0.026029655686221!GO:0033033;negative regulation of myeloid cell apoptosis;0.0263291967284975!GO:0001803;regulation of type III hypersensitivity;0.0263291967284975!GO:0032733;positive regulation of interleukin-10 production;0.0263291967284975!GO:0033025;regulation of mast cell apoptosis;0.0263291967284975!GO:0001805;positive regulation of type III hypersensitivity;0.0263291967284975!GO:0033023;mast cell homeostasis;0.0263291967284975!GO:0002431;Fc receptor mediated stimulatory signaling pathway;0.0263291967284975!GO:0033032;regulation of myeloid cell apoptosis;0.0263291967284975!GO:0001802;type III hypersensitivity;0.0263291967284975!GO:0033028;myeloid cell apoptosis;0.0263291967284975!GO:0042590;antigen processing and presentation of exogenous peptide antigen via MHC class I;0.0263291967284975!GO:0033026;negative regulation of mast cell apoptosis;0.0263291967284975!GO:0033024;mast cell apoptosis;0.0263291967284975!GO:0030134;ER to Golgi transport vesicle;0.0265867884593833!GO:0045185;maintenance of protein localization;0.0266882711248074!GO:0031901;early endosome membrane;0.0269825503534423!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0269825503534423!GO:0008287;protein serine/threonine phosphatase complex;0.0271305923424896!GO:0043085;positive regulation of catalytic activity;0.0271305923424896!GO:0006644;phospholipid metabolic process;0.0272955093231426!GO:0046479;glycosphingolipid catabolic process;0.0272955093231426!GO:0030127;COPII vesicle coat;0.027561318203755!GO:0012507;ER to Golgi transport vesicle membrane;0.027561318203755!GO:0005791;rough endoplasmic reticulum;0.027561318203755!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0276019372012489!GO:0006007;glucose catabolic process;0.0277613528466912!GO:0045859;regulation of protein kinase activity;0.0281169107579359!GO:0051092;activation of NF-kappaB transcription factor;0.0282587789064848!GO:0016311;dephosphorylation;0.0286761564619003!GO:0006376;mRNA splice site selection;0.0286761564619003!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0286761564619003!GO:0032386;regulation of intracellular transport;0.0289270702865103!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0289270702865103!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.028955725065337!GO:0043621;protein self-association;0.0291051551999176!GO:0051101;regulation of DNA binding;0.0296592879786249!GO:0005669;transcription factor TFIID complex;0.0297546361908271!GO:0016272;prefoldin complex;0.0298983733165384!GO:0006289;nucleotide-excision repair;0.0299140204950691!GO:0006509;membrane protein ectodomain proteolysis;0.0304750999826042!GO:0033619;membrane protein proteolysis;0.0304750999826042!GO:0031325;positive regulation of cellular metabolic process;0.0304982813692721!GO:0017166;vinculin binding;0.0305120251983788!GO:0045947;negative regulation of translational initiation;0.0309428753958209!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0310048270163948!GO:0032760;positive regulation of tumor necrosis factor production;0.0310048270163948!GO:0016505;apoptotic protease activator activity;0.0311046142607509!GO:0045792;negative regulation of cell size;0.031116104588415!GO:0030119;AP-type membrane coat adaptor complex;0.0312065229089243!GO:0048471;perinuclear region of cytoplasm;0.0319456338287699!GO:0006013;mannose metabolic process;0.0323055847921158!GO:0030518;steroid hormone receptor signaling pathway;0.0325576978105406!GO:0000339;RNA cap binding;0.0326432872228576!GO:0006595;polyamine metabolic process;0.0326432872228576!GO:0040029;regulation of gene expression, epigenetic;0.0326432872228576!GO:0006839;mitochondrial transport;0.033054607454249!GO:0008320;protein transmembrane transporter activity;0.0333393536561832!GO:0045637;regulation of myeloid cell differentiation;0.0336590616062806!GO:0030099;myeloid cell differentiation;0.0340561082163759!GO:0008610;lipid biosynthetic process;0.0341538299255952!GO:0008624;induction of apoptosis by extracellular signals;0.0342755235873896!GO:0047485;protein N-terminus binding;0.0344038180760092!GO:0008139;nuclear localization sequence binding;0.0347958957064454!GO:0008629;induction of apoptosis by intracellular signals;0.0348180847629186!GO:0006506;GPI anchor biosynthetic process;0.0350315195685772!GO:0030125;clathrin vesicle coat;0.0351735278783398!GO:0030665;clathrin coated vesicle membrane;0.0351735278783398!GO:0009116;nucleoside metabolic process;0.0357227663627709!GO:0030308;negative regulation of cell growth;0.0358856396391012!GO:0051087;chaperone binding;0.0374809653999898!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0377008286816169!GO:0006354;RNA elongation;0.0377895593073172!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0386425133646233!GO:0030149;sphingolipid catabolic process;0.0389587864197306!GO:0032640;tumor necrosis factor production;0.0394202064258265!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.039529518850389!GO:0022415;viral reproductive process;0.0395406483417413!GO:0008538;proteasome activator activity;0.0405559238181161!GO:0042158;lipoprotein biosynthetic process;0.0408677921892179!GO:0042611;MHC protein complex;0.0410400683117346!GO:0032507;maintenance of cellular protein localization;0.0411452359984099!GO:0030833;regulation of actin filament polymerization;0.0415949701268136!GO:0019752;carboxylic acid metabolic process;0.041765790275924!GO:0006516;glycoprotein catabolic process;0.0417871343566309!GO:0019783;small conjugating protein-specific protease activity;0.0417897254345487!GO:0006355;regulation of transcription, DNA-dependent;0.04197167468456!GO:0030131;clathrin adaptor complex;0.0420449977554099!GO:0030880;RNA polymerase complex;0.0425249947957008!GO:0000305;response to oxygen radical;0.0425577732061913!GO:0030521;androgen receptor signaling pathway;0.0430201202876356!GO:0008097;5S rRNA binding;0.0430718602664304!GO:0006635;fatty acid beta-oxidation;0.0434281791256719!GO:0002757;immune response-activating signal transduction;0.0436486337983227!GO:0006082;organic acid metabolic process;0.0436884893749303!GO:0000278;mitotic cell cycle;0.0436955285545241!GO:0000049;tRNA binding;0.0438772171168267!GO:0002224;toll-like receptor signaling pathway;0.0439712839497044!GO:0002221;pattern recognition receptor signaling pathway;0.0439712839497044!GO:0002822;regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains.;0.0446828069843608!GO:0002819;regulation of adaptive immune response;0.0446828069843608!GO:0008180;signalosome;0.0447872284021589!GO:0015630;microtubule cytoskeleton;0.0453183899707562!GO:0051345;positive regulation of hydrolase activity;0.0454971616118854!GO:0006302;double-strand break repair;0.0460907884911955!GO:0045926;negative regulation of growth;0.0463396071409205!GO:0006955;immune response;0.0465526628651198!GO:0006505;GPI anchor metabolic process;0.0465526628651198!GO:0022884;macromolecule transmembrane transporter activity;0.0467463596057232!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0467463596057232!GO:0000303;response to superoxide;0.0469142357845164!GO:0001819;positive regulation of cytokine production;0.0469142357845164!GO:0004843;ubiquitin-specific protease activity;0.048562992274046!GO:0001891;phagocytic cup;0.0487531018766245!GO:0000726;non-recombinational repair;0.0497674569817627 | |||
|sample_id=11799 | |sample_id=11799 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 100: | ||
|sample_tissue=blood | |sample_tissue=blood | ||
|top_motifs=NFIL3:2.43478682076;SPIB:2.35931837514;SPI1:2.14536508969;DMAP1_NCOR{1,2}_SMARC:1.90796939477;CEBPA,B_DDIT3:1.86390059228;ETS1,2:1.83862174065;NANOG{mouse}:1.78439935649;ATF5_CREB3:1.64225631659;IRF1,2:1.62368601414;PAX2:1.56531887868;RUNX1..3:1.55818680696;MAFB:1.50863661119;FOXP3:1.50781248468;HMX1:1.49508468276;FOXN1:1.45328524314;SREBF1,2:1.27827662588;IRF7:1.27613548674;HIF1A:1.26967687863;ELF1,2,4:1.26530993408;HLF:1.18960792809;TGIF1:1.17716747346;EP300:1.15191318736;TLX2:1.12068474492;NFKB1_REL_RELA:1.0874135601;RFX2..5_RFXANK_RFXAP:1.07078421467;CREB1:0.956370526214;ESRRA:0.947588081089;ATF4:0.915267468191;FOXO1,3,4:0.89860299121;FOX{D1,D2}:0.892164994065;NFE2L2:0.855108697543;NFIX:0.837291438295;RXRA_VDR{dimer}:0.791321001349;NKX2-2,8:0.779696388141;FOX{I1,J2}:0.763629974487;TAL1_TCF{3,4,12}:0.761249024446;FOSL2:0.67304290988;NR6A1:0.669731357199;HBP1_HMGB_SSRP1_UBTF:0.638161071888;FOXA2:0.63269431754;HMGA1,2:0.628861724538;BACH2:0.573296175111;NFE2:0.562171897218;ALX1:0.533671032925;FOS_FOS{B,L1}_JUN{B,D}:0.51862108798;BPTF:0.449749863252;FOXD3:0.387697748961;NFE2L1:0.375111852444;CDX1,2,4:0.37389991264;GLI1..3:0.366251819314;FOX{F1,F2,J1}:0.363910208733;ALX4:0.339388273052;ATF2:0.326863555718;NR1H4:0.289312224782;PITX1..3:0.266333267397;TFAP4:0.257610847793;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.239884851525;FOXP1:0.203914872842;OCT4_SOX2{dimer}:0.187157417054;GATA4:0.168070851303;JUN:0.159275580425;ATF6:0.147607742997;STAT2,4,6:0.138786427935;TFCP2:0.123974585615;ZBTB16:0.0931964851392;MYB:0.0855659930072;IKZF2:0.0772763003986;HOXA9_MEIS1:0.0648327741591;NANOG:0.0163384412902;PPARG:-0.00755663591715;POU1F1:-0.0439315635281;EN1,2:-0.0655817971797;STAT5{A,B}:-0.0764208215665;ESR1:-0.108581556652;DBP:-0.115019496818;PAX4:-0.119024658029;FOXQ1:-0.138089353715;HNF4A_NR2F1,2:-0.160150631632;RORA:-0.163646722919;NKX3-1:-0.189729148376;VSX1,2:-0.233218888068;STAT1,3:-0.235573817051;RXR{A,B,G}:-0.238289447762;HES1:-0.26716592721;POU5F1:-0.315637822747;TOPORS:-0.3169086624;T:-0.326479407565;RFX1:-0.327281818898;AHR_ARNT_ARNT2:-0.328638677667;TFAP2{A,C}:-0.334212549728;ZNF148:-0.339808975933;SOX2:-0.347994709701;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.357924444848;GATA6:-0.384467720373;MYFfamily:-0.409415279855;PAX5:-0.420796579629;FOXL1:-0.433984609845;SRF:-0.44028983007;XBP1:-0.444543936724;CRX:-0.45432297992;SPZ1:-0.45951985061;EBF1:-0.46458581051;NHLH1,2:-0.467718413262;MEF2{A,B,C,D}:-0.472616487377;MYOD1:-0.484152389083;REST:-0.485947912931;NKX3-2:-0.518217695842;PRDM1:-0.519645480275;SMAD1..7,9:-0.528008903816;ELK1,4_GABP{A,B1}:-0.528226720803;HNF1A:-0.534826799589;CUX2:-0.56068957896;NKX6-1,2:-0.566684624358;MTF1:-0.572296208794;PAX3,7:-0.575402737151;NR5A1,2:-0.580772317378;PAX8:-0.617363295753;BREu{core}:-0.626264153625;MZF1:-0.650242168159;AIRE:-0.652770659618;ZNF238:-0.655835573335;PAX1,9:-0.659069609482;NFATC1..3:-0.678412503249;ZEB1:-0.697889721461;POU2F1..3:-0.70470900253;TEF:-0.710372692677;PATZ1:-0.71951124219;PRRX1,2:-0.720240843932;GCM1,2:-0.723967426967;YY1:-0.728492341205;SOX5:-0.758433662158;SP1:-0.795273160832;HOX{A5,B5}:-0.801629739596;ARID5B:-0.825609956506;RREB1:-0.835035723638;SOX{8,9,10}:-0.848602989104;PDX1:-0.850984633351;HAND1,2:-0.851004525374;KLF4:-0.875088751755;MTE{core}:-0.925712612516;NKX2-3_NKX2-5:-0.9357752862;NR3C1:-0.951319119792;ZBTB6:-0.968819917366;IKZF1:-0.973304701488;HSF1,2:-0.979796798434;TBX4,5:-0.995156546559;ZFP161:-1.00525262694;ZNF423:-1.01049688375;LEF1_TCF7_TCF7L1,2:-1.01603867397;ZIC1..3:-1.01619679592;MED-1{core}:-1.0198103628;AR:-1.0451639003;HOX{A6,A7,B6,B7}:-1.05379931513;NKX2-1,4:-1.05545514183;LHX3,4:-1.06118744271;SNAI1..3:-1.11772631761;E2F1..5:-1.118971252;MAZ:-1.14545918608;LMO2:-1.1839060353;TBP:-1.19794544734;RBPJ:-1.21152585259;TFAP2B:-1.21483787633;TLX1..3_NFIC{dimer}:-1.25966283313;GTF2I:-1.26224146319;TP53:-1.28215750646;PBX1:-1.28534012862;UFEwm:-1.3079197551;HIC1:-1.31084565502;GZF1:-1.31469830386;ADNP_IRX_SIX_ZHX:-1.31798627698;EGR1..3:-1.32695985595;NRF1:-1.3408414863;NFY{A,B,C}:-1.36800812573;TEAD1:-1.40101322971;GTF2A1,2:-1.40917089247;HOX{A4,D4}:-1.41018094172;FOXM1:-1.41787697988;ONECUT1,2:-1.42381393326;EVI1:-1.47618073853;ZNF143:-1.49317713559;MYBL2:-1.49615718458;PAX6:-1.50284233684;POU6F1:-1.51965387685;XCPE1{core}:-1.5400806495;TFDP1:-1.60664723408;GFI1:-1.61640478951;GFI1B:-1.66553556908;CDC5L:-1.84947635699;bHLH_family:-1.89007879071;SOX17:-1.94798355909;ZNF384:-1.97786255065;POU3F1..4:-2.25478435785 | |top_motifs=NFIL3:2.43478682076;SPIB:2.35931837514;SPI1:2.14536508969;DMAP1_NCOR{1,2}_SMARC:1.90796939477;CEBPA,B_DDIT3:1.86390059228;ETS1,2:1.83862174065;NANOG{mouse}:1.78439935649;ATF5_CREB3:1.64225631659;IRF1,2:1.62368601414;PAX2:1.56531887868;RUNX1..3:1.55818680696;MAFB:1.50863661119;FOXP3:1.50781248468;HMX1:1.49508468276;FOXN1:1.45328524314;SREBF1,2:1.27827662588;IRF7:1.27613548674;HIF1A:1.26967687863;ELF1,2,4:1.26530993408;HLF:1.18960792809;TGIF1:1.17716747346;EP300:1.15191318736;TLX2:1.12068474492;NFKB1_REL_RELA:1.0874135601;RFX2..5_RFXANK_RFXAP:1.07078421467;CREB1:0.956370526214;ESRRA:0.947588081089;ATF4:0.915267468191;FOXO1,3,4:0.89860299121;FOX{D1,D2}:0.892164994065;NFE2L2:0.855108697543;NFIX:0.837291438295;RXRA_VDR{dimer}:0.791321001349;NKX2-2,8:0.779696388141;FOX{I1,J2}:0.763629974487;TAL1_TCF{3,4,12}:0.761249024446;FOSL2:0.67304290988;NR6A1:0.669731357199;HBP1_HMGB_SSRP1_UBTF:0.638161071888;FOXA2:0.63269431754;HMGA1,2:0.628861724538;BACH2:0.573296175111;NFE2:0.562171897218;ALX1:0.533671032925;FOS_FOS{B,L1}_JUN{B,D}:0.51862108798;BPTF:0.449749863252;FOXD3:0.387697748961;NFE2L1:0.375111852444;CDX1,2,4:0.37389991264;GLI1..3:0.366251819314;FOX{F1,F2,J1}:0.363910208733;ALX4:0.339388273052;ATF2:0.326863555718;NR1H4:0.289312224782;PITX1..3:0.266333267397;TFAP4:0.257610847793;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.239884851525;FOXP1:0.203914872842;OCT4_SOX2{dimer}:0.187157417054;GATA4:0.168070851303;JUN:0.159275580425;ATF6:0.147607742997;STAT2,4,6:0.138786427935;TFCP2:0.123974585615;ZBTB16:0.0931964851392;MYB:0.0855659930072;IKZF2:0.0772763003986;HOXA9_MEIS1:0.0648327741591;NANOG:0.0163384412902;PPARG:-0.00755663591715;POU1F1:-0.0439315635281;EN1,2:-0.0655817971797;STAT5{A,B}:-0.0764208215665;ESR1:-0.108581556652;DBP:-0.115019496818;PAX4:-0.119024658029;FOXQ1:-0.138089353715;HNF4A_NR2F1,2:-0.160150631632;RORA:-0.163646722919;NKX3-1:-0.189729148376;VSX1,2:-0.233218888068;STAT1,3:-0.235573817051;RXR{A,B,G}:-0.238289447762;HES1:-0.26716592721;POU5F1:-0.315637822747;TOPORS:-0.3169086624;T:-0.326479407565;RFX1:-0.327281818898;AHR_ARNT_ARNT2:-0.328638677667;TFAP2{A,C}:-0.334212549728;ZNF148:-0.339808975933;SOX2:-0.347994709701;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.357924444848;GATA6:-0.384467720373;MYFfamily:-0.409415279855;PAX5:-0.420796579629;FOXL1:-0.433984609845;SRF:-0.44028983007;XBP1:-0.444543936724;CRX:-0.45432297992;SPZ1:-0.45951985061;EBF1:-0.46458581051;NHLH1,2:-0.467718413262;MEF2{A,B,C,D}:-0.472616487377;MYOD1:-0.484152389083;REST:-0.485947912931;NKX3-2:-0.518217695842;PRDM1:-0.519645480275;SMAD1..7,9:-0.528008903816;ELK1,4_GABP{A,B1}:-0.528226720803;HNF1A:-0.534826799589;CUX2:-0.56068957896;NKX6-1,2:-0.566684624358;MTF1:-0.572296208794;PAX3,7:-0.575402737151;NR5A1,2:-0.580772317378;PAX8:-0.617363295753;BREu{core}:-0.626264153625;MZF1:-0.650242168159;AIRE:-0.652770659618;ZNF238:-0.655835573335;PAX1,9:-0.659069609482;NFATC1..3:-0.678412503249;ZEB1:-0.697889721461;POU2F1..3:-0.70470900253;TEF:-0.710372692677;PATZ1:-0.71951124219;PRRX1,2:-0.720240843932;GCM1,2:-0.723967426967;YY1:-0.728492341205;SOX5:-0.758433662158;SP1:-0.795273160832;HOX{A5,B5}:-0.801629739596;ARID5B:-0.825609956506;RREB1:-0.835035723638;SOX{8,9,10}:-0.848602989104;PDX1:-0.850984633351;HAND1,2:-0.851004525374;KLF4:-0.875088751755;MTE{core}:-0.925712612516;NKX2-3_NKX2-5:-0.9357752862;NR3C1:-0.951319119792;ZBTB6:-0.968819917366;IKZF1:-0.973304701488;HSF1,2:-0.979796798434;TBX4,5:-0.995156546559;ZFP161:-1.00525262694;ZNF423:-1.01049688375;LEF1_TCF7_TCF7L1,2:-1.01603867397;ZIC1..3:-1.01619679592;MED-1{core}:-1.0198103628;AR:-1.0451639003;HOX{A6,A7,B6,B7}:-1.05379931513;NKX2-1,4:-1.05545514183;LHX3,4:-1.06118744271;SNAI1..3:-1.11772631761;E2F1..5:-1.118971252;MAZ:-1.14545918608;LMO2:-1.1839060353;TBP:-1.19794544734;RBPJ:-1.21152585259;TFAP2B:-1.21483787633;TLX1..3_NFIC{dimer}:-1.25966283313;GTF2I:-1.26224146319;TP53:-1.28215750646;PBX1:-1.28534012862;UFEwm:-1.3079197551;HIC1:-1.31084565502;GZF1:-1.31469830386;ADNP_IRX_SIX_ZHX:-1.31798627698;EGR1..3:-1.32695985595;NRF1:-1.3408414863;NFY{A,B,C}:-1.36800812573;TEAD1:-1.40101322971;GTF2A1,2:-1.40917089247;HOX{A4,D4}:-1.41018094172;FOXM1:-1.41787697988;ONECUT1,2:-1.42381393326;EVI1:-1.47618073853;ZNF143:-1.49317713559;MYBL2:-1.49615718458;PAX6:-1.50284233684;POU6F1:-1.51965387685;XCPE1{core}:-1.5400806495;TFDP1:-1.60664723408;GFI1:-1.61640478951;GFI1B:-1.66553556908;CDC5L:-1.84947635699;bHLH_family:-1.89007879071;SOX17:-1.94798355909;ZNF384:-1.97786255065;POU3F1..4:-2.25478435785 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11799-124C8;search_select_hide=table117:FF:11799-124C8 | |||
}} | }} | ||
Latest revision as of 18:21, 4 June 2020
| Name: | CD14+CD16- Monocytes, donor2 |
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| Species: | Human (Homo sapiens) |
| Library ID: | CNhs13216 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13216
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13216
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.105 |
| 10 | 10 | 0.0189 |
| 100 | 100 | 0.979 |
| 101 | 101 | 0.385 |
| 102 | 102 | 0.575 |
| 103 | 103 | 0.214 |
| 104 | 104 | 0.794 |
| 105 | 105 | 0.266 |
| 106 | 106 | 0.00483 |
| 107 | 107 | 0.354 |
| 108 | 108 | 0.706 |
| 109 | 109 | 0.0652 |
| 11 | 11 | 0.116 |
| 110 | 110 | 0.288 |
| 111 | 111 | 0.027 |
| 112 | 112 | 0.256 |
| 113 | 113 | 0.533 |
| 114 | 114 | 0.0112 |
| 115 | 115 | 0.125 |
| 116 | 116 | 0.757 |
| 117 | 117 | 0.0353 |
| 118 | 118 | 0.1 |
| 119 | 119 | 0.29 |
| 12 | 12 | 0.323 |
| 120 | 120 | 0.66 |
| 121 | 121 | 0.871 |
| 122 | 122 | 0.801 |
| 123 | 123 | 0.0291 |
| 124 | 124 | 0.827 |
| 125 | 125 | 0.11 |
| 126 | 126 | 0.289 |
| 127 | 127 | 0.258 |
| 128 | 128 | 0.0372 |
| 129 | 129 | 0.796 |
| 13 | 13 | 0.101 |
| 130 | 130 | 0.202 |
| 131 | 131 | 0.839 |
| 132 | 132 | 0.0605 |
| 133 | 133 | 0.972 |
| 134 | 134 | 0.478 |
| 135 | 135 | 0.0698 |
| 136 | 136 | 0.879 |
| 137 | 137 | 1.80623e-4 |
| 138 | 138 | 0.136 |
| 139 | 139 | 0.0377 |
| 14 | 14 | 0.289 |
| 140 | 140 | 0.151 |
| 141 | 141 | 0.332 |
| 142 | 142 | 0.974 |
| 143 | 143 | 0.0435 |
| 144 | 144 | 0.705 |
| 145 | 145 | 0.498 |
| 146 | 146 | 0.814 |
| 147 | 147 | 0.289 |
| 148 | 148 | 0.00641 |
| 149 | 149 | 0.654 |
| 15 | 15 | 0.0999 |
| 150 | 150 | 0.61 |
| 151 | 151 | 0.293 |
| 152 | 152 | 0.284 |
| 153 | 153 | 0.69 |
| 154 | 154 | 0.649 |
| 155 | 155 | 0.283 |
| 156 | 156 | 0.918 |
| 157 | 157 | 0.755 |
| 158 | 158 | 0.116 |
| 159 | 159 | 0.831 |
| 16 | 16 | 0.381 |
| 160 | 160 | 0.371 |
| 161 | 161 | 0.398 |
| 162 | 162 | 0.445 |
| 163 | 163 | 0.839 |
| 164 | 164 | 0.0973 |
| 165 | 165 | 0.111 |
| 166 | 166 | 0.756 |
| 167 | 167 | 0.181 |
| 168 | 168 | 0.345 |
| 169 | 169 | 0.00866 |
| 17 | 17 | 0.28 |
| 18 | 18 | 0.164 |
| 19 | 19 | 0.2 |
| 2 | 2 | 0.993 |
| 20 | 20 | 0.604 |
| 21 | 21 | 0.512 |
| 22 | 22 | 0.219 |
| 23 | 23 | 0.125 |
| 24 | 24 | 0.192 |
| 25 | 25 | 0.173 |
| 26 | 26 | 0.0292 |
| 27 | 27 | 0.485 |
| 28 | 28 | 0.548 |
| 29 | 29 | 0.0701 |
| 3 | 3 | 0.0637 |
| 30 | 30 | 0.52 |
| 31 | 31 | 0.667 |
| 32 | 32 | 0.79 |
| 33 | 33 | 0.194 |
| 34 | 34 | 0.486 |
| 35 | 35 | 0.136 |
| 36 | 36 | 0.0476 |
| 37 | 37 | 0.0641 |
| 38 | 38 | 0.427 |
| 39 | 39 | 0.734 |
| 4 | 4 | 0.885 |
| 40 | 40 | 0.103 |
| 41 | 41 | 0.0283 |
| 42 | 42 | 0.327 |
| 43 | 43 | 0.0786 |
| 44 | 44 | 0.774 |
| 45 | 45 | 0.859 |
| 46 | 46 | 0.151 |
| 47 | 47 | 0.388 |
| 48 | 48 | 0.365 |
| 49 | 49 | 0.118 |
| 5 | 5 | 0.106 |
| 50 | 50 | 0.986 |
| 51 | 51 | 0.317 |
| 52 | 52 | 0.343 |
| 53 | 53 | 0.22 |
| 54 | 54 | 0.374 |
| 55 | 55 | 0.505 |
| 56 | 56 | 0.741 |
| 57 | 57 | 0.656 |
| 58 | 58 | 0.081 |
| 59 | 59 | 0.136 |
| 6 | 6 | 0.59 |
| 60 | 60 | 0.0418 |
| 61 | 61 | 0.248 |
| 62 | 62 | 0.0293 |
| 63 | 63 | 0.473 |
| 64 | 64 | 0.317 |
| 65 | 65 | 0.216 |
| 66 | 66 | 0.127 |
| 67 | 67 | 0.472 |
| 68 | 68 | 0.774 |
| 69 | 69 | 0.719 |
| 7 | 7 | 0.136 |
| 70 | 70 | 0.0169 |
| 71 | 71 | 0.0214 |
| 72 | 72 | 0.289 |
| 73 | 73 | 0.139 |
| 74 | 74 | 0.0497 |
| 75 | 75 | 0.0702 |
| 76 | 76 | 0.222 |
| 77 | 77 | 0.464 |
| 78 | 78 | 0.149 |
| 79 | 79 | 0.0392 |
| 8 | 8 | 0.359 |
| 80 | 80 | 0.26 |
| 81 | 81 | 0.255 |
| 82 | 82 | 0.0733 |
| 83 | 83 | 0.536 |
| 84 | 84 | 0.581 |
| 85 | 85 | 0.0276 |
| 86 | 86 | 0.105 |
| 87 | 87 | 0.234 |
| 88 | 88 | 0.591 |
| 89 | 89 | 0.349 |
| 9 | 9 | 0.289 |
| 90 | 90 | 0.0405 |
| 91 | 91 | 0.35 |
| 92 | 92 | 0.336 |
| 93 | 93 | 0.486 |
| 94 | 94 | 0.0308 |
| 95 | 95 | 0.119 |
| 96 | 96 | 0.401 |
| 97 | 97 | 0.968 |
| 98 | 98 | 0.156 |
| 99 | 99 | 0.0481 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs13216
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0011111 human CD14-positive CD16-negative Monocytes sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000766 (myeloid leukocyte)
0000219 (motile cell)
0000325 (stuff accumulating cell)
0000473 (defensive cell)
0000234 (phagocyte)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0000255 (eukaryotic cell)
0000576 (monocyte)
0000860 (classical monocyte)
0002057 (CD14-positive, CD16-negative classical monocyte)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0011111 (human CD14-positive CD16-negative Monocytes sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)
CL:0002057 (CD14-positive, CD16-negative classical monocyte)
