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{{f5samples
{{f5samples
|id=FF:11879-125C7
|DRA_sample_Accession=CAGE@SAMD00004841
|name=CD14+ monocytes - treated with B-glucan, donor2
|accession_numbers=CAGE;DRX008136;DRR009008;DRZ000433;DRZ001818;DRZ011783;DRZ013168
|sample_id=11879
|ancestors_in_anatomy_facet=
|rna_tube_id=125C7
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000766,CL:0000219,CL:0000325,CL:0000473,CL:0000234,CL:0000738,CL:0002087,CL:0000255,CL:0000576,CL:0000860,CL:0002057
|rna_box=125
|rna_position=C7
|sample_cell_lot=
|sample_cell_catalog=
|sample_company=
|rna_lot_number=D4-10
|rna_catalog_number=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=
|sample_donor(cell lot)=donor2
|sample_sex=male
|sample_age=51
|sample_ethnicity=
|rna_rin=8.8
|rna_od260/230=1.52
|rna_od260/280=2.02
|sample_cell_type=monocyte
|sample_cell_line=
|sample_collaboration=Christine Wells (University of Queensland)
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_weight_ug=3.288015
|rna_concentration=0.73067
|sample_note=
|profile_hcage=CNhs13489,LSID1025,release012,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000037,CL:0000040,CL:0000048,CL:0000049,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000548,CL:0000557,CL:0000559,CL:0000566,CL:0000576,CL:0000723,CL:0000738,CL:0000763,CL:0000766,CL:0000837,CL:0000839,CL:0000860,CL:0000988,CL:0001012,CL:0002009,CL:0002031,CL:0002032,CL:0002057,CL:0002087,CL:0002194,CL:0002320,CL:0002371
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000479,UBERON:0000480,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0001062,UBERON:0001434,UBERON:0001474,UBERON:0002050,UBERON:0002193,UBERON:0002204,UBERON:0002371,UBERON:0002384,UBERON:0002390,UBERON:0002405,UBERON:0002532,UBERON:0004120,UBERON:0004765,UBERON:0005423
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000625,FF:0000350,FF:0000630,FF:0011102
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr2:68592406..68592424,+!p1@PLEK!3.17!1464.58!PLEK;;chr11:47400078..47400106,-!p1@SPI1!2.79!610.17!SPI1;;chr21:34442439..34442455,+!p1@OLIG1!2.56!364.29!OLIG1;;chr7:115670804..115670825,-!p1@TFEC!2.44!277.13!TFEC;;chr10:64576105..64576133,-!p1@EGR2!2.38!474.90!EGR2;;chr12:54778471..54778528,-!p1@ZNF385A!2.38!237.66!ZNF385A;;chr16:85932760..85932775,+!p1@IRF8!2.28!189.14!IRF8;;chr11:47399947..47399961,-!p3@SPI1!2.11!127.46!SPI1;;chr20:39317868..39317884,-!p1@MAFB!2.07!1277.91!MAFB;;chr11:47400062..47400077,-!p2@SPI1!2.07!115.54!SPI1;;chr6:106534192..106534224,+!p1@PRDM1!1.96!243.00!PRDM1;;chr21:34398234..34398250,+!p1@OLIG2!1.96!90.87!OLIG2;;chr10:64018918..64018936,+!p2@ZNF365!1.89!76.48!ZNF365;;chr11:47399996..47400014,-!p4@SPI1!1.86!71.54!SPI1;;chr19:50432132..50432217,+!p2@ATF5!1.83!78.94!ATF5;;chr1:25256756..25256774,-!p1@RUNX3!1.81!115.95!RUNX3;;chr11:47400032..47400043,-!p5@SPI1!1.78!58.80!SPI1;;chr10:35484053..35484076,+!p1@CREM!1.76!136.51!CREM;;chr10:31288370..31288393,-!p3@ZNF438!1.76!57.15!ZNF438;;chr10:31288398..31288455,-!p2@ZNF438!1.75!64.55!ZNF438;;chr2:70142232..70142251,+!p1@MXD1!1.74!290.28!MXD1;;chr3:12329397..12329433,+!p2@PPARG!1.72!114.72!PPARG;;chr19:45971246..45971265,+!p1@FOSB!1.71!884.42!FOSB;;chr14:35872453..35872485,-!p2@NFKBIA!1.71!120.06!NFKBIA;;chr9:102584159..102584174,+!p2@NR4A3!1.69!83.88!NR4A3;;chr12:52445218..52445237,+!p1@NR4A1!1.68!560.42!NR4A1;;chr2:157189180..157189290,-!p1@NR4A2!1.68!235.19!NR4A2;;chr12:72056800..72056834,+!p1@THAP2!1.68!62.09!THAP2;;chr2:145277640..145277771,-!p1@ZEB2!1.67!577.69!ZEB2;;chr2:68592394..68592405,+!p2@PLEK!1.67!45.64!PLEK;;chr6:106534230..106534254,+!p2@PRDM1!1.66!108.96!PRDM1;;chr1:212782094..212782109,+!p1@ATF3!1.60!995.85!ATF3;;chr16:31885093..31885165,+!p1@ZNF267!1.59!553.43!ZNF267;;chr2:145275162..145275202,-!p2@ZEB2!1.59!215.86!ZEB2;;chr14:35873947..35873965,-!p1@NFKBIA!1.57!2151.64!NFKBIA;;chr2:61108695..61108753,+!p1@REL!1.57!237.24!REL;;chr22:38597987..38598021,+!p2@MAFF!1.56!208.05!MAFF;;chr8:22550982..22550999,-!p1@EGR3!1.56!96.21!EGR3;;chr12:72056749..72056767,+!p6@THAP2!1.56!38.65!THAP2;;chr20:48599506..48599526,+!p1@SNAI1!1.55!213.40!SNAI1;;chr10:51572408..51572454,+!p3@NCOA4!1.55!192.02!NCOA4;;chr11:47400045..47400060,-!p6@SPI1!1.55!34.54!SPI1;;chr12:54778351..54778378,-!p6@ZNF385A!1.54!33.72!ZNF385A;;chr21:34442540..34442560,+!p2@OLIG1!1.54!33.72!OLIG1;;chr3:12330560..12330579,+!p1@PPARG!1.53!37.83!PPARG;;chr4:103422499..103422632,+!p1@NFKB1!1.51!627.44!NFKB1;;chr19:36391434..36391450,-!p1@NFKBID!1.50!58.39!NFKBID;;chr9:102584128..102584144,+!p3@NR4A3!1.49!56.33!NR4A3;;chr6:15246200..15246214,+!p2@JARID2!1.48!79.36!JARID2;;chr14:35872962..35873025,-!p3@NFKBIA!1.48!72.37!NFKBIA;;chr12:72056773..72056796,+!p3@THAP2!1.48!37.83!THAP2;;chr20:48807351..48807384,+!p1@CEBPB!1.47!2758.94!CEBPB;;chr7:128577972..128578047,+!p1@IRF5!1.47!43.99!IRF5;;chr6:144385698..144385742,-!p2@PLAGL1!1.47!34.54!PLAGL1;;chr6:44233252..44233296,-!p1@NFKBIE!1.45!254.92!NFKBIE;;chr10:104155480..104155534,+!p2@NFKB2!1.45!171.46!NFKB2;;chr9:102584262..102584276,+!p1@NR4A3!1.45!59.62!NR4A3;;chr21:30671690..30671762,+!p2@BACH1!1.44!87.99!BACH1;;chrX:153305787..153305807,-!p3@MECP2!1.44!26.73!MECP2;;chrX:129244454..129244488,-!p1@ELF4!1.42!176.39!ELF4;;chr10:51572339..51572376,+!p4@NCOA4!1.42!55.51!NCOA4;;chr21:30671235..30671253,+!p1@BACH1!1.40!296.45!BACH1;;chr19:54041669..54041697,+!p2@ZNF331!1.40!23.85!ZNF331;;chr19:19496539..19496576,+!p8@GATAD2A!1.39!40.71!GATAD2A;;chr10:104154246..104154347,+!p3@NFKB2!1.36!129.93!NFKB2;;chr7:50344289..50344323,+!p1@IKZF1!1.36!21.79!IKZF1;;chr19:45251395..45251432,+!p8@BCL3!1.36!21.79!BCL3;;chr21:36260295..36260310,-!p3@RUNX1!1.34!33.30!RUNX1;;chr13:41593425..41593480,-!p1@ELF1!1.33!126.64!ELF1;;chr19:33793430..33793447,-!p1@CEBPA!1.32!81.41!CEBPA;;chr19:54058073..54058088,+!p1@ZNF331!1.32!19.74!ZNF331;;chr9:129567282..129567353,+!p1@ZBTB43!1.31!244.64!ZBTB43;;chr2:97202480..97202499,+!p1@ARID5A!1.30!186.26!ARID5A;;chr12:48298765..48298783,-!p2@VDR!1.30!38.65!VDR;;chr6:12012170..12012245,+!p1@HIVEP1!1.28!89.63!HIVEP1;;chr10:104155659..104155676,+!p4@NFKB2!1.28!22.61!NFKB2;;chr4:106068026..106068084,+!p1@TET2!1.27!156.24!TET2;;chr18:3449720..3449749,+!p2@TGIF1!1.27!37.42!TGIF1;;chr11:47399920..47399931,-!p7@SPI1!1.27!17.68!SPI1;;chr11:65430554..65430579,-!p3@RELA!1.26!43.17!RELA;;chr1:221052776..221052799,+!p1@HLX!1.26!30.43!HLX;;chr8:80679993..80680011,-!p1@HEY1!1.26!24.67!HEY1;;chr20:48809000..48809053,+!p12@CEBPB!1.26!22.61!CEBPB;;chr17:38497662..38497713,+!p4@RARA!1.26!19.74!RARA;;chrX:129244430..129244442,-!p5@ELF4!1.26!17.27!ELF4;;chr6:106535598..106535637,+!p7@PRDM1!1.26!17.27!PRDM1;;chr1:38325227..38325246,-!p2@MTF1!1.25!23.03!MTF1;;chr1:37940170..37940190,+!p1@ZC3H12A!1.23!191.60!ZC3H12A;;chr6:12012249..12012266,+!p5@HIVEP1!1.23!27.96!HIVEP1;;chr5:142782823..142782854,-!p3@NR3C1!1.23!22.61!NR3C1;;chr7:17338266..17338282,+!p1@AHR!1.22!165.70!AHR;;chr12:11802753..11802834,+!p2@ETV6!1.22!75.24!ETV6;;chr2:70314240..70314256,+!p4@PCBP1!1.22!31.66!PCBP1;;chr6:391743..391759,+!p1@IRF4!1.22!15.62!IRF4;;chr8:53373491..53373506,-!p4@ST18!1.22!15.62!ST18;;chr1:157108130..157108173,-!p1@ETV3!1.21!108.14!ETV3;;chr21:36421535..36421610,-!p2@RUNX1!1.21!53.45!RUNX1;;chr19:45250948..45250998,+!p3@BCL3!1.21!38.24!BCL3;;chr8:72756637..72756664,-!p3@MSC!1.21!17.27!MSC;;chr2:238600933..238600985,+!p3@LRRFIP1!1.20!78.94!LRRFIP1;;chr19:45252008..45252024,+!p2@BCL3!1.20!48.52!BCL3;;chr8:72756063..72756125,-!p1@MSC!1.20!29.60!MSC;;chr20:48807456..48807475,+!p3@CEBPB!1.20!28.37!CEBPB;;chr19:50432104..50432126,+!p6@ATF5!1.20!14.80!ATF5;;chr1:25256439..25256476,-!p3@RUNX3!1.20!14.80!RUNX3;;chr20:48807648..48807671,+!p9@CEBPB!1.19!20.97!CEBPB;;chr14:35872926..35872951,-!p4@NFKBIA!1.18!19.74!NFKBIA;;chr1:221052733..221052749,+!p2@HLX!1.18!18.50!HLX;;chr10:31288329..31288353,-!p7@ZNF438!1.18!13.98!ZNF438;;chr10:35484090..35484104,+!p6@CREM!1.18!13.98!CREM;;chr7:17338324..17338341,+!p3@AHR!1.17!46.05!AHR;;chr2:192015701..192015743,-!p1@STAT4!1.17!18.91!STAT4;;chr2:28615716..28615733,+!p1@FOSL2!1.16!634.84!FOSL2;;chr3:170075436..170075520,+!p1@SKIL!1.16!289.05!SKIL;;chr12:96588219..96588263,+!p2@ELK3!1.16!97.04!ELK3;;chr2:145277882..145277967,-!p3@ZEB2!1.16!23.44!ZEB2;;chr2:113999360..113999386,-!p4@PAX8!1.16!13.57!PAX8;;chr18:77155922..77155939,+!p1@NFATC1!1.15!35.77!NFATC1;;chr10:3827371..3827386,-!p2@KLF6!1.14!107.31!KLF6;;chr6:12011943..12012015,+!p2@HIVEP1!1.14!41.53!HIVEP1;;chr14:64970670..64970712,-!p3@ZBTB25!1.14!27.96!ZBTB25;;chr6:15246217..15246228,+!p3@JARID2!1.14!22.61!JARID2;;chr2:61108808..61108821,+!p3@REL!1.14!16.04!REL;;chr14:64971014..64971044,+!p4@ZBTB1!1.12!20.15!ZBTB1;;chr18:3449586..3449617,+!p8@TGIF1!1.12!19.32!TGIF1;;chr18:3449618..3449634,+!p13@TGIF1!1.12!15.21!TGIF1;;chr21:30672433..30672464,+!p6@BACH1!1.12!12.34!BACH1;;chr2:238600998..238601013,+!p5@LRRFIP1!1.12!12.34!LRRFIP1;;chr9:110252035..110252057,-!p1@KLF4!1.11!189.55!KLF4;;chr19:19496624..19496660,+!p3@GATAD2A!1.11!54.69!GATAD2A;;chr10:104155455..104155479,+!p1@NFKB2!1.10!168.99!NFKB2;;chr12:48298785..48298828,-!p1@VDR!1.10!61.26!VDR;;chr9:102584241..102584261,+!p4@NR4A3!1.10!18.09!NR4A3;;chr2:61108771..61108789,+!p4@REL!1.10!17.68!REL;;chr2:102091566..102091581,-!p1@RFX8!1.10!11.51!RFX8;;chr2:231090471..231090504,+!p2@SP140!1.10!11.51!SP140;;chr13:41593392..41593403,-!p7@ELF1!1.10!11.51!ELF1;;chr11:615942..615957,-!p1@IRF7!1.09!106.08!IRF7;;chr1:156470515..156470542,-!p2@MEF2D!1.09!60.03!MEF2D;;chr20:48807615..48807644,+!p6@CEBPB!1.09!18.91!CEBPB;;chr6:15246261..15246312,+!p1@JARID2!1.08!267.67!JARID2;;chr3:69788576..69788648,+!p1@MITF!1.08!59.62!MITF;;chr20:48807171..48807234,+!p4@CEBPB!1.08!24.26!CEBPB;;chr2:68615063..68615089,+!p4@PLEK!1.08!11.10!PLEK;;chr3:126191157..126191171,-!p4@ZXDC!1.08!11.10!ZXDC;;chr2:28618532..28618610,+!p4@FOSL2!1.07!18.50!FOSL2;;chr12:96588279..96588299,+!p4@ELK3!1.06!50.16!ELK3;;chr17:79885537..79885554,-!p2@MAFG!1.06!20.56!MAFG;;chr18:3448455..3448480,+!p5@TGIF1!1.06!19.32!TGIF1;;chr7:149470641..149470694,-!p1@ZNF467!1.05!46.87!ZNF467;;chr17:79881332..79881348,-!p3@MAFG!1.05!15.21!MAFG;;chr5:71803177..71803255,-!p1@ZNF366!1.05!10.28!ZNF366;;chr7:115670792..115670797,-!p2@TFEC!1.05!10.28!TFEC;;chr3:101568349..101568365,+!p1@NFKBIZ!1.04!518.89!NFKBIZ;;chr21:36260980..36261011,-!p1@RUNX1!1.04!293.16!RUNX1;;chr17:38474489..38474548,+!p1@RARA!1.03!313.31!RARA;;chr3:12329358..12329393,+!p3@PPARG!1.03!24.26!PPARG;;chr18:3449527..3449582,+!p6@TGIF1!1.03!18.91!TGIF1;;chr18:3449695..3449712,+!p9@TGIF1!1.03!15.21!TGIF1;;chr1:156470494..156470505,-!p3@MEF2D!1.03!14.39!MEF2D;;chr3:39195037..39195069,-!p2@CSRNP1!1.02!60.44!CSRNP1;;chr6:20403916..20403965,+!p3@E2F3!1.02!43.58!E2F3;;chr2:208394817..208394834,+!p3@CREB1!1.02!38.65!CREB1;;chr12:96588368..96588394,+!p3@ELK3!1.02!25.90!ELK3;;chr3:101546827..101546847,+!p2@NFKBIZ!1.02!13.57!NFKBIZ;;chr14:35872494..35872511,-!p5@NFKBIA!1.02!12.75!NFKBIA;;chr2:145277589..145277612,-!p12@ZEB2!1.02!9.46!ZEB2;;chr3:12329464..12329472,+!p6@PPARG!1.02!9.46!PPARG;;chr19:36389839..36389857,-!p4@NFKBID!1.02!9.46!NFKBID;;chr6:106535687..106535706,+!p8@PRDM1!1.02!9.46!PRDM1;;chr21:40177845..40177863,+!p1@ETS2!1.01!550.14!ETS2;;chr2:157198916..157198978,-!p2@NR4A2!1.01!32.89!NR4A2;;chr10:35416142..35416169,+!p3@CREM!1.01!25.08!CREM;;chr20:48807430..48807439,+!p8@CEBPB!1.01!13.98!CEBPB;;chr19:42636586..42636607,-!p1@POU2F2!1.00!25.49!POU2F2;;chr9:110250697..110250738,-!p2@KLF4!1.00!10.69!KLF4;;chr8:72755203..72755239,-!p10@MSC!1.00!9.05!MSC;;chr1:25291620..25291635,-!p4@RUNX3!1.00!9.05!RUNX3;;chrX:153305962..153305995,-!p5@MECP2!1.00!9.05!MECP2;;chr19:45504688..45504782,+!p1@RELB!0.99!55.10!RELB;;chr10:35484804..35484902,+!p2@CREM!0.99!34.54!CREM;;chr8:123793988..123794016,+!p1@ZHX2!0.99!15.62!ZHX2;;chr3:150126101..150126118,+!p6@TSC22D2!0.99!14.39!TSC22D2;;chr3:5021113..5021180,+!p1@BHLHE40!0.98!611.00!BHLHE40;;chr1:935467..935484,-!p1@HES4!0.98!38.65!HES4;;chr4:103423079..103423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chr9:88969207..88969218,-!p7@ZCCHC6!0.35!1.23!ZCCHC6;;chr21:40191431..40191450,+!p7@ETS2!0.35!1.23!ETS2;;chr2:100759010..100759035,-!p1@AFF3!0.35!1.23!AFF3;;chr2:100759037..100759058,-!p2@AFF3!0.35!1.23!AFF3;;chr2:102091590..102091601,-!p5@RFX8!0.35!1.23!RFX8;;chr2:145276113..145276149,-!p28@ZEB2!0.35!1.23!ZEB2;;chr2:145277575..145277580,-!p22@ZEB2!0.35!1.23!ZEB2;;chr2:157189101..157189111,-!p15@NR4A2!0.35!1.23!NR4A2;;chr2:178129746..178129769,-!p13@NFE2L2!0.35!1.23!NFE2L2;;chr2:70165961..70165981,+!p8@MXD1!0.35!1.23!MXD1;;chr2:70166212..70166223,+!p16@MXD1!0.35!1.23!MXD1;;chr2:97203110..97203159,+!p4@ARID5A!0.35!1.23!ARID5A;;chr3:12392972..12392983,+!p16@PPARG!0.35!1.23!PPARG;;chr3:126191239..126191272,-!p11@ZXDC!0.35!1.23!ZXDC;;chr3:18465604..18465618,-!p9@SATB1!0.35!1.23!SATB1;;chr3:18466620..18466631,-!p16@SATB1!0.35!1.23!SATB1;;chr3:18487057..18487105,-!p4@SATB1!0.35!1.23!SATB1;;chr3:187455486..187455504,-!p6@BCL6!0.35!1.23!BCL6;;chr3:5022272..5022321,+!p7@BHLHE40!0.35!1.23!BHLHE40;;chr4:106066776..106066791,+!p9@TET2!0.35!1.23!TET2;;chr4:106156800..106156812,+!p17@TET2!0.35!1.23!TET2;;chr10:124768217..124768228,-!p2@IKZF5!0.35!1.23!IKZF5;;chr10:21822967..21822980,+!p12@MLLT10!0.35!1.23!MLLT10;;chr10:35416172..35416184,+!p13@CREM!0.35!1.23!CREM;;chr10:35485013..35485034,+!p15@CREM!0.35!1.23!CREM;;chr10:3818974..3818985,-!p25@KLF6!0.35!1.23!KLF6;;chr10:3823938..3823954,-!p13@KLF6!0.35!1.23!KLF6;;chr10:51585449..51585487,+!p6@NCOA4!0.35!1.23!NCOA4;;chr10:60144869..60144887,+!p3@TFAM!0.35!1.23!TFAM;;chr12:108154762..108154776,-!p4@PRDM4!0.35!1.23!PRDM4;;chr12:54691711..54691725,-!p7@NFE2!0.35!1.23!NFE2;;chr12:54694738..54694749,-!p5@NFE2!0.35!1.23!NFE2;;chr12:72056858..72056869,+!p14@THAP2!0.35!1.23!THAP2;;chr12:96649259..96649290,+!p9@ELK3!0.35!1.23!ELK3;;chr13:41635759..41635774,-!p21@ELF1!0.35!1.23!ELF1;;chr13:46626764..46626775,-!p16@ZC3H13!0.35!1.23!ZC3H13;;chr13:72440901..72440968,-!p4@DACH1!0.35!1.23!DACH1;;chr14:103059455..103059488,+!p5@RCOR1!0.35!1.23!RCOR1;;chr14:35874092..35874103,-!p16@NFKBIA!0.35!1.23!NFKBIA;;chr14:75746340..75746368,+!p3@FOS!0.35!1.23!FOS;;chr16:88752861..88752884,-!p2@SNAI3!0.35!1.23!SNAI3;;chr17:38487239..38487261,+!p12@RARA!0.35!1.23!RARA;;chr17:38497874..38497884,+!p30@RARA!0.35!1.23!RARA;;chr17:40440446..40440464,+!p5@STAT5A!0.35!1.23!STAT5A;;chr17:45810594..45810608,+!p1@TBX21!0.35!1.23!TBX21;;chr18:46477326..46477341,-!p2@SMAD7!0.35!1.23!SMAD7;;chr18:72922730..72922733,+!p5@TSHZ1!0.35!1.23!TSHZ1;;chr19:10416315..10416333,-!p1@ZGLP1!0.35!1.23!ZGLP1;;chr19:33864740..33864747,+!p4@CEBPG!0.35!1.23!CEBPG;;chr20:34359925..34359991,+!p1@PHF20!0.34!86.35!PHF20;;chr18:51750948..51751059,-!p1@MBD2!0.34!62.91!MBD2;;chr1:90460661..90460745,+!p1@ZNF326!0.34!56.33!ZNF326;;chr1:91487553..91487612,-!p1@ZNF644!0.34!32.89!ZNF644;;chr17:65821603..65821635,+!p1@BPTF!0.34!32.89!BPTF;;chr2:70314849..70314860,+!p3@PCBP1!0.34!28.78!PCBP1;;chr8:28747884..28747938,+!p1@HMBOX1!0.34!24.67!HMBOX1;;chr9:2015335..2015370,+!p1@SMARCA2!0.34!23.85!SMARCA2;;chr7:6676943..6676984,+!p1@ENST00000427912!0.34!17.68!ZNF316;;chr19:56146352..56146420,+!p2@ZNF580,p2@ZNF581!0.34!12.34!ZNF580;;chr15:85291544..85291598,+!p2@ZNF592!0.34!11.51!ZNF592;;chr18:74534479..74534551,+!p1@ZNF236!0.34!5.35!ZNF236;;chr1:158979851..158979865,+!p5@IFI16!0.34!3.70!IFI16;;chr7:86781778..86781789,+!p4@DMTF1!0.34!3.29!DMTF1;;chr6:108882364..108882391,+!p4@FOXO3!0.34!2.06!FOXO3;;
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000234;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000576;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000763;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000766;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000860;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002193;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002390;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002405
|ffid_belonging_in_development=CL:0000049,CL:0000134,CL:0002057
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 66: Line 41:
|fonse_treatment=EFO:0000369,FF:0000625,FF:0000630,FF:0011102,FF:11879-125C7
|fonse_treatment=EFO:0000369,FF:0000625,FF:0000630,FF:0011102,FF:11879-125C7
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|rna_box=125
|rna_catalog_number=
|rna_concentration=0.73067
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_lot_number=D4-10
|rna_od260/230=1.52
|rna_od260/280=2.02
|rna_position=C7
|rna_rin=8.8
|rna_sample_type=total RNA
|rna_tube_id=125C7
|rna_weight_ug=3.288015
|sample_age=51
|sample_category=primary cells
|sample_cell_catalog=
|sample_cell_line=
|sample_cell_lot=
|sample_cell_type=monocyte
|sample_collaboration=Christine Wells (University of Queensland)
|sample_company=
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=donor2
|sample_ethnicity=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.19635752422217e-269!GO:0005737;cytoplasm;5.8449984335039e-128!GO:0043227;membrane-bound organelle;4.7052569430969e-116!GO:0043231;intracellular membrane-bound organelle;1.02110484676916e-115!GO:0043226;organelle;2.09732774774566e-108!GO:0043229;intracellular organelle;1.33649212871165e-107!GO:0044444;cytoplasmic part;4.54234422077823e-82!GO:0005515;protein binding;6.50945671221779e-74!GO:0044422;organelle part;3.54321923889136e-68!GO:0044237;cellular metabolic process;7.43553782076549e-67!GO:0044446;intracellular organelle part;1.1806504581467e-66!GO:0044238;primary metabolic process;1.45239326722968e-65!GO:0043170;macromolecule metabolic process;3.55982360597679e-63!GO:0032991;macromolecular complex;8.44653236282966e-57!GO:0003723;RNA binding;1.40779546506736e-52!GO:0030529;ribonucleoprotein complex;2.69205254979205e-50!GO:0019538;protein metabolic process;9.58242928855962e-48!GO:0005634;nucleus;1.57775732008482e-47!GO:0044428;nuclear part;5.66582781116554e-46!GO:0044267;cellular protein metabolic process;1.20760747780653e-44!GO:0044260;cellular macromolecule metabolic process;2.30046241442997e-44!GO:0033036;macromolecule localization;1.63696539279234e-41!GO:0006412;translation;3.26874850966263e-40!GO:0045184;establishment of protein localization;5.49475755097631e-40!GO:0015031;protein transport;6.30485782851214e-40!GO:0008104;protein localization;1.81894218223338e-38!GO:0043233;organelle lumen;5.66418356129815e-37!GO:0031974;membrane-enclosed lumen;5.66418356129815e-37!GO:0005829;cytosol;1.45200399757461e-35!GO:0043283;biopolymer metabolic process;9.90847737108569e-34!GO:0006915;apoptosis;1.39904999674261e-33!GO:0012501;programmed cell death;1.53608400132237e-33!GO:0031090;organelle membrane;1.54120905748519e-33!GO:0010467;gene expression;2.71035796219173e-33!GO:0008219;cell death;5.50102974447538e-32!GO:0016265;death;5.50102974447538e-32!GO:0006396;RNA processing;8.28437034244228e-32!GO:0016071;mRNA metabolic process;2.59884977697561e-31!GO:0009059;macromolecule biosynthetic process;9.18190328265456e-30!GO:0031981;nuclear lumen;1.53358858307999e-29!GO:0044249;cellular biosynthetic process;5.38076597319973e-29!GO:0009058;biosynthetic process;8.86980371425009e-29!GO:0043234;protein complex;2.15364114468453e-28!GO:0016043;cellular component organization and biogenesis;2.17745171577571e-28!GO:0046907;intracellular transport;8.14206149239284e-28!GO:0008380;RNA splicing;2.54143506457354e-27!GO:0006886;intracellular protein transport;6.34787246346941e-27!GO:0006397;mRNA processing;1.12182161190524e-26!GO:0005840;ribosome;1.8075336811655e-26!GO:0005739;mitochondrion;1.79860046886899e-24!GO:0003735;structural constituent of ribosome;2.71389520654813e-24!GO:0031967;organelle envelope;2.95314076808887e-24!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.30760222292555e-24!GO:0031975;envelope;5.31679699131355e-24!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.46531888312178e-23!GO:0033279;ribosomal subunit;4.36545831111312e-23!GO:0042981;regulation of apoptosis;1.16437660543186e-22!GO:0043067;regulation of programmed cell death;2.64026025520625e-22!GO:0044445;cytosolic part;1.06267710463834e-21!GO:0065003;macromolecular complex assembly;1.14793882924694e-21!GO:0008134;transcription factor binding;1.40237209510993e-21!GO:0051649;establishment of cellular localization;1.45992548407627e-21!GO:0051641;cellular localization;7.03807682733467e-21!GO:0005654;nucleoplasm;1.73251803157931e-20!GO:0005681;spliceosome;1.8296272206621e-20!GO:0000166;nucleotide binding;1.88123237732674e-19!GO:0044429;mitochondrial part;1.83212402354906e-18!GO:0022607;cellular component assembly;3.80189299636956e-18!GO:0048770;pigment granule;4.31926952296165e-18!GO:0042470;melanosome;4.31926952296165e-18!GO:0022613;ribonucleoprotein complex biogenesis and assembly;5.0814955392827e-18!GO:0048523;negative regulation of cellular process;1.35383998819333e-17!GO:0016192;vesicle-mediated transport;1.36063529102201e-17!GO:0044451;nucleoplasm part;3.09812000356804e-17!GO:0007243;protein kinase cascade;6.61659667765948e-17!GO:0044265;cellular macromolecule catabolic process;1.34053229725067e-16!GO:0006119;oxidative phosphorylation;3.30388653132864e-16!GO:0006512;ubiquitin cycle;4.8051316832808e-16!GO:0048519;negative regulation of biological process;6.09359929338582e-16!GO:0043412;biopolymer modification;6.9092748754902e-16!GO:0005773;vacuole;2.84811342388015e-15!GO:0022618;protein-RNA complex assembly;2.92698048333555e-15!GO:0005740;mitochondrial envelope;3.31060602565975e-15!GO:0043069;negative regulation of programmed cell death;7.90338143972316e-15!GO:0043285;biopolymer catabolic process;8.16585388986711e-15!GO:0050794;regulation of cellular process;8.28336002663228e-15!GO:0043066;negative regulation of apoptosis;8.90902211960772e-15!GO:0006464;protein modification process;9.34591136166312e-15!GO:0007242;intracellular signaling cascade;1.10133544412728e-14!GO:0016070;RNA metabolic process;1.1539904408238e-14!GO:0017111;nucleoside-triphosphatase activity;1.17057198495519e-14!GO:0031966;mitochondrial membrane;1.2975540458743e-14!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.64925944460564e-14!GO:0043687;post-translational protein modification;1.64925944460564e-14!GO:0016462;pyrophosphatase activity;1.66250841472794e-14!GO:0016817;hydrolase activity, acting on acid anhydrides;2.4086986954663e-14!GO:0032553;ribonucleotide binding;2.42796159633793e-14!GO:0032555;purine ribonucleotide binding;2.42796159633793e-14!GO:0002376;immune system process;3.07630151024127e-14!GO:0009057;macromolecule catabolic process;4.69270899771981e-14!GO:0006605;protein targeting;6.65004934266705e-14!GO:0007249;I-kappaB kinase/NF-kappaB cascade;8.00866208449274e-14!GO:0019866;organelle inner membrane;8.83214164413087e-14!GO:0006913;nucleocytoplasmic transport;9.08940063986694e-14!GO:0016604;nuclear body;9.9183256866711e-14!GO:0003712;transcription cofactor activity;1.07239001659975e-13!GO:0006996;organelle organization and biogenesis;1.16259372227204e-13!GO:0019941;modification-dependent protein catabolic process;1.29809745698528e-13!GO:0043632;modification-dependent macromolecule catabolic process;1.29809745698528e-13!GO:0017076;purine nucleotide binding;1.45501528624298e-13!GO:0000323;lytic vacuole;1.52996136898388e-13!GO:0005764;lysosome;1.52996136898388e-13!GO:0044257;cellular protein catabolic process;1.71468215802232e-13!GO:0006511;ubiquitin-dependent protein catabolic process;1.79252458105507e-13!GO:0051603;proteolysis involved in cellular protein catabolic process;1.80160297416211e-13!GO:0051169;nuclear transport;1.85552897632211e-13!GO:0003676;nucleic acid binding;2.17470951104504e-13!GO:0065009;regulation of a molecular function;2.58639678605164e-13!GO:0016874;ligase activity;2.68726988637675e-13!GO:0012505;endomembrane system;4.87147120217609e-13!GO:0006950;response to stress;6.32287860721775e-13!GO:0044248;cellular catabolic process;9.91787629998671e-13!GO:0006366;transcription from RNA polymerase II promoter;1.27471751618751e-12!GO:0015934;large ribosomal subunit;1.48779193022725e-12!GO:0005794;Golgi apparatus;1.49978831714351e-12!GO:0008135;translation factor activity, nucleic acid binding;1.51816326034846e-12!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.56768750688303e-12!GO:0051246;regulation of protein metabolic process;1.75893262130528e-12!GO:0006457;protein folding;2.3250118563048e-12!GO:0050789;regulation of biological process;4.23450257472109e-12!GO:0006793;phosphorus metabolic process;4.41065220604669e-12!GO:0006796;phosphate metabolic process;4.41065220604669e-12!GO:0016607;nuclear speck;4.70388792766871e-12!GO:0006916;anti-apoptosis;5.34478611268624e-12!GO:0000502;proteasome complex (sensu Eukaryota);7.44358426491353e-12!GO:0005768;endosome;7.61104952064987e-12!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;7.65861915871608e-12!GO:0030163;protein catabolic process;9.61857527143218e-12!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.11172433304566e-11!GO:0015935;small ribosomal subunit;1.62502952499292e-11!GO:0005743;mitochondrial inner membrane;2.71607357820353e-11!GO:0003743;translation initiation factor activity;2.96823923948423e-11!GO:0006413;translational initiation;6.6303510778389e-11!GO:0016310;phosphorylation;7.25839893772335e-11!GO:0048522;positive regulation of cellular process;7.96105110913359e-11!GO:0065007;biological regulation;1.14657909093026e-10!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.17273086486309e-10!GO:0006955;immune response;1.22577777013212e-10!GO:0044455;mitochondrial membrane part;1.9580083775527e-10!GO:0051186;cofactor metabolic process;2.80684739519624e-10!GO:0006259;DNA metabolic process;3.10970943956078e-10!GO:0006446;regulation of translational initiation;3.35043482668607e-10!GO:0051082;unfolded protein binding;3.73795476011572e-10!GO:0048518;positive regulation of biological process;4.53248515589571e-10!GO:0005783;endoplasmic reticulum;5.14891018540694e-10!GO:0005524;ATP binding;5.29736582785966e-10!GO:0032559;adenyl ribonucleotide binding;6.69976312099581e-10!GO:0005730;nucleolus;7.16518744772175e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;9.46653318289638e-10!GO:0050790;regulation of catalytic activity;1.01960751232754e-09!GO:0006732;coenzyme metabolic process;1.82225117965015e-09!GO:0005770;late endosome;1.84352279925596e-09!GO:0005635;nuclear envelope;1.99732623010232e-09!GO:0031324;negative regulation of cellular metabolic process;2.72956321153369e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;3.13128764759119e-09!GO:0016787;hydrolase activity;3.5509948043738e-09!GO:0043065;positive regulation of apoptosis;3.63739547383672e-09!GO:0019829;cation-transporting ATPase activity;3.73672481532565e-09!GO:0030554;adenyl nucleotide binding;3.77419372454683e-09!GO:0000398;nuclear mRNA splicing, via spliceosome;3.88885778084327e-09!GO:0000375;RNA splicing, via transesterification reactions;3.88885778084327e-09!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;3.88885778084327e-09!GO:0048468;cell development;4.00104064004685e-09!GO:0015986;ATP synthesis coupled proton transport;4.5947176389393e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;4.5947176389393e-09!GO:0043068;positive regulation of programmed cell death;5.22164452769305e-09!GO:0008639;small protein conjugating enzyme activity;6.35534680274174e-09!GO:0048193;Golgi vesicle transport;7.57581103809541e-09!GO:0009056;catabolic process;9.28932999523019e-09!GO:0004842;ubiquitin-protein ligase activity;1.01812613782997e-08!GO:0007049;cell cycle;1.03066552377845e-08!GO:0005746;mitochondrial respiratory chain;1.0927747205424e-08!GO:0019787;small conjugating protein ligase activity;1.22326755916475e-08!GO:0017038;protein import;1.22326755916475e-08!GO:0009967;positive regulation of signal transduction;1.26408948221013e-08!GO:0006417;regulation of translation;1.53435132464609e-08!GO:0051170;nuclear import;1.67095841549579e-08!GO:0019899;enzyme binding;1.7961662152073e-08!GO:0003713;transcription coactivator activity;1.89916510392855e-08!GO:0016564;transcription repressor activity;2.93814750764359e-08!GO:0009152;purine ribonucleotide biosynthetic process;3.05469055059926e-08!GO:0009150;purine ribonucleotide metabolic process;3.48052436744698e-08!GO:0006164;purine nucleotide biosynthetic process;3.61546439411802e-08!GO:0006163;purine nucleotide metabolic process;3.68771758704901e-08!GO:0005774;vacuolar membrane;3.79266149577997e-08!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;3.79266149577997e-08!GO:0006606;protein import into nucleus;3.90887511096345e-08!GO:0009615;response to virus;4.72371552642525e-08!GO:0009892;negative regulation of metabolic process;4.9096345555961e-08!GO:0051726;regulation of cell cycle;5.90702673231351e-08!GO:0015078;hydrogen ion transmembrane transporter activity;6.22699387901653e-08!GO:0042623;ATPase activity, coupled;6.25805156553373e-08!GO:0006754;ATP biosynthetic process;6.45921839892658e-08!GO:0006753;nucleoside phosphate metabolic process;6.45921839892658e-08!GO:0008047;enzyme activator activity;6.57712840085032e-08!GO:0031965;nuclear membrane;7.0724430231063e-08!GO:0000074;regulation of progression through cell cycle;7.69969691420212e-08!GO:0016887;ATPase activity;8.23881543030954e-08!GO:0050136;NADH dehydrogenase (quinone) activity;8.33580101647131e-08!GO:0003954;NADH dehydrogenase activity;8.33580101647131e-08!GO:0008137;NADH dehydrogenase (ubiquinone) activity;8.33580101647131e-08!GO:0009259;ribonucleotide metabolic process;9.69797441856308e-08!GO:0044453;nuclear membrane part;9.98645277761063e-08!GO:0006917;induction of apoptosis;1.12746692837943e-07!GO:0016469;proton-transporting two-sector ATPase complex;1.27365126565411e-07!GO:0045786;negative regulation of progression through cell cycle;1.27365126565411e-07!GO:0019222;regulation of metabolic process;1.56075154102017e-07!GO:0044432;endoplasmic reticulum part;1.56075154102017e-07!GO:0009889;regulation of biosynthetic process;1.61063617969054e-07!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.61253920831988e-07!GO:0016881;acid-amino acid ligase activity;1.64634203823782e-07!GO:0009260;ribonucleotide biosynthetic process;1.67622968033911e-07!GO:0009607;response to biotic stimulus;1.71027489307365e-07!GO:0007264;small GTPase mediated signal transduction;1.81293200291403e-07!GO:0012502;induction of programmed cell death;1.81471756718062e-07!GO:0044437;vacuolar part;1.8942644304086e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.94154173018608e-07!GO:0016481;negative regulation of transcription;1.94725801654527e-07!GO:0051188;cofactor biosynthetic process;2.03379861438149e-07!GO:0008565;protein transporter activity;2.23948071529523e-07!GO:0006461;protein complex assembly;2.58722363230836e-07!GO:0003924;GTPase activity;2.61083465807169e-07!GO:0009108;coenzyme biosynthetic process;2.6390297454393e-07!GO:0005765;lysosomal membrane;2.69273144271096e-07!GO:0031326;regulation of cellular biosynthetic process;3.27663918098485e-07!GO:0043228;non-membrane-bound organelle;3.45683814457401e-07!GO:0043232;intracellular non-membrane-bound organelle;3.45683814457401e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;3.62093169760922e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;3.62093169760922e-07!GO:0009055;electron carrier activity;3.6212784002375e-07!GO:0046034;ATP metabolic process;3.7055289120816e-07!GO:0005793;ER-Golgi intermediate compartment;3.80871142378881e-07!GO:0009966;regulation of signal transduction;4.13339194716163e-07!GO:0009142;nucleoside triphosphate biosynthetic process;4.38417983308806e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;4.38417983308806e-07!GO:0005525;GTP binding;5.46169721072791e-07!GO:0042775;organelle ATP synthesis coupled electron transport;6.29460795745225e-07!GO:0042773;ATP synthesis coupled electron transport;6.29460795745225e-07!GO:0031982;vesicle;7.23803999904322e-07!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;7.3518076324767e-07!GO:0016563;transcription activator activity;8.2248285981723e-07!GO:0044440;endosomal part;8.47294860184888e-07!GO:0010008;endosome membrane;8.47294860184888e-07!GO:0030964;NADH dehydrogenase complex (quinone);9.76171875202813e-07!GO:0045271;respiratory chain complex I;9.76171875202813e-07!GO:0005747;mitochondrial respiratory chain complex I;9.76171875202813e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;9.76171875202813e-07!GO:0009144;purine nucleoside triphosphate metabolic process;9.76171875202813e-07!GO:0009199;ribonucleoside triphosphate metabolic process;1.1341795922373e-06!GO:0003714;transcription corepressor activity;1.23665116487849e-06!GO:0006752;group transfer coenzyme metabolic process;1.30921306645917e-06!GO:0050657;nucleic acid transport;1.75268522928729e-06!GO:0051236;establishment of RNA localization;1.75268522928729e-06!GO:0050658;RNA transport;1.75268522928729e-06!GO:0032446;protein modification by small protein conjugation;1.79170491029357e-06!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.90150607303234e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.97175137041741e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;2.09162837111458e-06!GO:0016568;chromatin modification;2.11089005688823e-06!GO:0005643;nuclear pore;2.12260936021112e-06!GO:0006403;RNA localization;2.16612738325089e-06!GO:0016044;membrane organization and biogenesis;2.61119756796046e-06!GO:0006325;establishment and/or maintenance of chromatin architecture;2.8443291441821e-06!GO:0009141;nucleoside triphosphate metabolic process;2.86199985750826e-06!GO:0016567;protein ubiquitination;3.08086894799265e-06!GO:0006357;regulation of transcription from RNA polymerase II promoter;3.79011147888342e-06!GO:0042175;nuclear envelope-endoplasmic reticulum network;4.2887451434064e-06!GO:0005789;endoplasmic reticulum membrane;4.96246625085945e-06!GO:0008026;ATP-dependent helicase activity;4.98285134512475e-06!GO:0031410;cytoplasmic vesicle;5.18813672945322e-06!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;5.97399935735765e-06!GO:0015399;primary active transmembrane transporter activity;5.97399935735765e-06!GO:0031252;leading edge;6.65318294871385e-06!GO:0032561;guanyl ribonucleotide binding;6.95662943926229e-06!GO:0019001;guanyl nucleotide binding;6.95662943926229e-06!GO:0006323;DNA packaging;8.08976864806557e-06!GO:0031988;membrane-bound vesicle;8.58138734294102e-06!GO:0006888;ER to Golgi vesicle-mediated transport;8.59567088130198e-06!GO:0004386;helicase activity;9.18460228870622e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;9.87387252488705e-06!GO:0005096;GTPase activator activity;1.24854196424625e-05!GO:0016197;endosome transport;1.66787395804306e-05!GO:0046930;pore complex;1.70986564517642e-05!GO:0006974;response to DNA damage stimulus;1.80268317688983e-05!GO:0031323;regulation of cellular metabolic process;1.88464587773991e-05!GO:0051789;response to protein stimulus;2.03547636966296e-05!GO:0006986;response to unfolded protein;2.03547636966296e-05!GO:0031902;late endosome membrane;2.0524315445131e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;2.14386916561939e-05!GO:0005839;proteasome core complex (sensu Eukaryota);2.16018325263034e-05!GO:0030695;GTPase regulator activity;2.39237354106456e-05!GO:0051028;mRNA transport;2.42470446067153e-05!GO:0051338;regulation of transferase activity;2.57476774622655e-05!GO:0022402;cell cycle process;2.90596695029423e-05!GO:0006954;inflammatory response;3.09422602639533e-05!GO:0016023;cytoplasmic membrane-bound vesicle;3.18774797986595e-05!GO:0031980;mitochondrial lumen;3.43849478024917e-05!GO:0005759;mitochondrial matrix;3.43849478024917e-05!GO:0005769;early endosome;3.85721658717233e-05!GO:0003724;RNA helicase activity;3.98145943583172e-05!GO:0030120;vesicle coat;4.12455174180429e-05!GO:0030662;coated vesicle membrane;4.12455174180429e-05!GO:0045321;leukocyte activation;4.22515032308161e-05!GO:0048475;coated membrane;4.27771591852853e-05!GO:0030117;membrane coat;4.27771591852853e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;4.51514145464799e-05!GO:0008632;apoptotic program;4.70989506988347e-05!GO:0009893;positive regulation of metabolic process;4.73182611435853e-05!GO:0030099;myeloid cell differentiation;5.08783023212144e-05!GO:0006897;endocytosis;5.15571082811405e-05!GO:0010324;membrane invagination;5.15571082811405e-05!GO:0046519;sphingoid metabolic process;6.07864107981996e-05!GO:0051168;nuclear export;6.07864107981996e-05!GO:0046822;regulation of nucleocytoplasmic transport;6.10158212721996e-05!GO:0043549;regulation of kinase activity;6.36223798382962e-05!GO:0043566;structure-specific DNA binding;6.84301622773563e-05!GO:0051336;regulation of hydrolase activity;7.11704982752521e-05!GO:0043492;ATPase activity, coupled to movement of substances;7.49296423647974e-05!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;7.70987760111924e-05!GO:0001816;cytokine production;8.01322282893346e-05!GO:0004298;threonine endopeptidase activity;8.49236499098305e-05!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;9.08486188261305e-05!GO:0045859;regulation of protein kinase activity;0.000100568338164991!GO:0042254;ribosome biogenesis and assembly;0.000102236116794572!GO:0006401;RNA catabolic process;0.000105842003215831!GO:0006672;ceramide metabolic process;0.00010876544463489!GO:0051427;hormone receptor binding;0.000116328580378466!GO:0030036;actin cytoskeleton organization and biogenesis;0.000122151356522784!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000127333332633519!GO:0006281;DNA repair;0.00012748660120653!GO:0006613;cotranslational protein targeting to membrane;0.000130778485878155!GO:0030097;hemopoiesis;0.000136828249676447!GO:0045259;proton-transporting ATP synthase complex;0.000149951347238384!GO:0003697;single-stranded DNA binding;0.000150387378323826!GO:0022890;inorganic cation transmembrane transporter activity;0.000152701385703703!GO:0051223;regulation of protein transport;0.000156251658395753!GO:0004674;protein serine/threonine kinase activity;0.000159344078401772!GO:0006818;hydrogen transport;0.000160152862382267!GO:0046983;protein dimerization activity;0.000162334505565006!GO:0007265;Ras protein signal transduction;0.000177259560374826!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000190663433924724!GO:0005083;small GTPase regulator activity;0.00019135939640745!GO:0035257;nuclear hormone receptor binding;0.000197994485669016!GO:0007050;cell cycle arrest;0.000209447344777856!GO:0016740;transferase activity;0.00022241099348682!GO:0009060;aerobic respiration;0.00023466453767749!GO:0044431;Golgi apparatus part;0.000238473093483534!GO:0005057;receptor signaling protein activity;0.000247076589001951!GO:0030532;small nuclear ribonucleoprotein complex;0.00025376825231657!GO:0001726;ruffle;0.000255321243328043!GO:0005885;Arp2/3 protein complex;0.000261088699129138!GO:0015992;proton transport;0.000267074893291093!GO:0065002;intracellular protein transport across a membrane;0.000267074893291093!GO:0000151;ubiquitin ligase complex;0.000273274140842249!GO:0051276;chromosome organization and biogenesis;0.000273274140842249!GO:0043085;positive regulation of catalytic activity;0.000276598159449058!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000307133893202406!GO:0045892;negative regulation of transcription, DNA-dependent;0.000310932493941006!GO:0010468;regulation of gene expression;0.000331579491461396!GO:0000245;spliceosome assembly;0.000335981288918467!GO:0007033;vacuole organization and biogenesis;0.000340072338803551!GO:0032940;secretion by cell;0.000348678513025191!GO:0008186;RNA-dependent ATPase activity;0.000361037139714606!GO:0060090;molecular adaptor activity;0.000361454824092295!GO:0007040;lysosome organization and biogenesis;0.000361454824092295!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.000419064786997028!GO:0004812;aminoacyl-tRNA ligase activity;0.000419064786997028!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.000419064786997028!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000432251090972161!GO:0003729;mRNA binding;0.000455674895920002!GO:0045941;positive regulation of transcription;0.000476494209376466!GO:0007034;vacuolar transport;0.000482062317031589!GO:0007041;lysosomal transport;0.000496992620113408!GO:0002757;immune response-activating signal transduction;0.000496992620113408!GO:0006952;defense response;0.000539671686900066!GO:0033157;regulation of intracellular protein transport;0.000569341588478757!GO:0042306;regulation of protein import into nucleus;0.000569341588478757!GO:0006402;mRNA catabolic process;0.000583566773777681!GO:0046649;lymphocyte activation;0.000592020302644181!GO:0016281;eukaryotic translation initiation factor 4F complex;0.000608975501538579!GO:0045333;cellular respiration;0.000629079211782349!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000636880210173943!GO:0005798;Golgi-associated vesicle;0.000644408610912006!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.00064574712691496!GO:0045893;positive regulation of transcription, DNA-dependent;0.000658468640644726!GO:0022415;viral reproductive process;0.000660229800289225!GO:0030149;sphingolipid catabolic process;0.000726443124284974!GO:0043038;amino acid activation;0.000751941129657539!GO:0006418;tRNA aminoacylation for protein translation;0.000751941129657539!GO:0043039;tRNA aminoacylation;0.000751941129657539!GO:0009117;nucleotide metabolic process;0.000775197581483732!GO:0031325;positive regulation of cellular metabolic process;0.000781409014070192!GO:0009719;response to endogenous stimulus;0.000809243958736817!GO:0001775;cell activation;0.000820146445114273!GO:0002764;immune response-regulating signal transduction;0.000848072855974855!GO:0016301;kinase activity;0.000990679949316181!GO:0019904;protein domain specific binding;0.00100443161515014!GO:0005741;mitochondrial outer membrane;0.001010808462631!GO:0018193;peptidyl-amino acid modification;0.0010299814624506!GO:0004004;ATP-dependent RNA helicase activity;0.00103597844122329!GO:0051707;response to other organism;0.001062030950892!GO:0005099;Ras GTPase activator activity;0.00112829051167635!GO:0002520;immune system development;0.00115214404489786!GO:0019221;cytokine and chemokine mediated signaling pathway;0.0011537884524915!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00116635197297927!GO:0031072;heat shock protein binding;0.00119656521468604!GO:0006399;tRNA metabolic process;0.0012722657654802!GO:0044262;cellular carbohydrate metabolic process;0.00127632893697332!GO:0002521;leukocyte differentiation;0.00129859581310837!GO:0030029;actin filament-based process;0.00131063554361791!GO:0033116;ER-Golgi intermediate compartment membrane;0.00134110012623607!GO:0002274;myeloid leukocyte activation;0.00136520010644086!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.00136707272913032!GO:0045637;regulation of myeloid cell differentiation;0.00136801052350289!GO:0006919;caspase activation;0.00142525896736192!GO:0048534;hemopoietic or lymphoid organ development;0.00150084405605694!GO:0006643;membrane lipid metabolic process;0.00150444648482531!GO:0005667;transcription factor complex;0.00151670754718706!GO:0042990;regulation of transcription factor import into nucleus;0.00163748315193168!GO:0042991;transcription factor import into nucleus;0.00163748315193168!GO:0043623;cellular protein complex assembly;0.00163748315193168!GO:0006350;transcription;0.00166731338213371!GO:0065004;protein-DNA complex assembly;0.00173499039140569!GO:0005761;mitochondrial ribosome;0.00173499039140569!GO:0000313;organellar ribosome;0.00173499039140569!GO:0051090;regulation of transcription factor activity;0.00175166856260585!GO:0043087;regulation of GTPase activity;0.00179759797502036!GO:0005637;nuclear inner membrane;0.00181031565916889!GO:0008654;phospholipid biosynthetic process;0.0018861939807366!GO:0007005;mitochondrion organization and biogenesis;0.00193168782650321!GO:0006612;protein targeting to membrane;0.0020679724239649!GO:0016072;rRNA metabolic process;0.00214221015819847!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.00215285472524909!GO:0002429;immune response-activating cell surface receptor signaling pathway;0.00219596794681761!GO:0042110;T cell activation;0.00220702163762677!GO:0009611;response to wounding;0.00238649248093241!GO:0016251;general RNA polymerase II transcription factor activity;0.0027161457800925!GO:0045454;cell redox homeostasis;0.0027161457800925!GO:0048487;beta-tubulin binding;0.00282341263685756!GO:0008234;cysteine-type peptidase activity;0.00282341263685756!GO:0031901;early endosome membrane;0.00282341263685756!GO:0043281;regulation of caspase activity;0.0028567438070623!GO:0043280;positive regulation of caspase activity;0.00289401900846288!GO:0006364;rRNA processing;0.0029319455885817!GO:0019867;outer membrane;0.00341729483150493!GO:0005070;SH3/SH2 adaptor activity;0.00357641367781078!GO:0008383;manganese superoxide dismutase activity;0.00357641367781078!GO:0001315;age-dependent response to reactive oxygen species;0.00357641367781078!GO:0002768;immune response-regulating cell surface receptor signaling pathway;0.00357820540360049!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00360996710059231!GO:0042802;identical protein binding;0.00369482078636226!GO:0009165;nucleotide biosynthetic process;0.00369858332999063!GO:0031968;organelle outer membrane;0.00378326640513205!GO:0042613;MHC class II protein complex;0.00402118739564303!GO:0001817;regulation of cytokine production;0.00429371181046503!GO:0019377;glycolipid catabolic process;0.00435562132726175!GO:0031625;ubiquitin protein ligase binding;0.00467149548034261!GO:0007259;JAK-STAT cascade;0.00480719494117518!GO:0032386;regulation of intracellular transport;0.00484425071593188!GO:0006099;tricarboxylic acid cycle;0.00490456389275246!GO:0046356;acetyl-CoA catabolic process;0.00490456389275246!GO:0000139;Golgi membrane;0.00490792452598127!GO:0046966;thyroid hormone receptor binding;0.00510824684603881!GO:0006468;protein amino acid phosphorylation;0.00517611119919474!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00533466026332098!GO:0051187;cofactor catabolic process;0.00563047793205828!GO:0006665;sphingolipid metabolic process;0.00570851882102499!GO:0006749;glutathione metabolic process;0.00577112554820692!GO:0002252;immune effector process;0.00599441814919581!GO:0006352;transcription initiation;0.00606863021514828!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00639543946019048!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00639543946019048!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00639543946019048!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00639543946019048!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.00642622412507553!GO:0006333;chromatin assembly or disassembly;0.00676092933711958!GO:0016791;phosphoric monoester hydrolase activity;0.00684457817945997!GO:0000082;G1/S transition of mitotic cell cycle;0.00700325422810223!GO:0046479;glycosphingolipid catabolic process;0.00708704657321183!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00735343775966462!GO:0016363;nuclear matrix;0.0074188560161653!GO:0033673;negative regulation of kinase activity;0.00764163129947545!GO:0006469;negative regulation of protein kinase activity;0.00764163129947545!GO:0019220;regulation of phosphate metabolic process;0.00781263866812597!GO:0051174;regulation of phosphorus metabolic process;0.00781263866812597!GO:0006891;intra-Golgi vesicle-mediated transport;0.0079654341575065!GO:0006607;NLS-bearing substrate import into nucleus;0.0081528666593315!GO:0019079;viral genome replication;0.00816923591624067!GO:0006611;protein export from nucleus;0.00821971182210453!GO:0001819;positive regulation of cytokine production;0.00844984957097353!GO:0004185;serine carboxypeptidase activity;0.00845209142526133!GO:0003690;double-stranded DNA binding;0.00858894639329795!GO:0051348;negative regulation of transferase activity;0.00882070952418155!GO:0051098;regulation of binding;0.00893120528303076!GO:0006091;generation of precursor metabolites and energy;0.00893532637702458!GO:0030218;erythrocyte differentiation;0.00894593328039434!GO:0030503;regulation of cell redox homeostasis;0.0091443892828287!GO:0048471;perinuclear region of cytoplasm;0.00920284016927207!GO:0051252;regulation of RNA metabolic process;0.00927404711878894!GO:0045045;secretory pathway;0.00932964173810924!GO:0003702;RNA polymerase II transcription factor activity;0.00946310689510022!GO:0046466;membrane lipid catabolic process;0.00958741071388032!GO:0050851;antigen receptor-mediated signaling pathway;0.00965943537514958!GO:0008139;nuclear localization sequence binding;0.00971919158511354!GO:0006458;'de novo' protein folding;0.0110335908551719!GO:0051084;'de novo' posttranslational protein folding;0.0110335908551719!GO:0000339;RNA cap binding;0.0110995638365527!GO:0006084;acetyl-CoA metabolic process;0.0111221673554632!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0111899390474866!GO:0030127;COPII vesicle coat;0.0113777951724219!GO:0012507;ER to Golgi transport vesicle membrane;0.0113777951724219!GO:0043021;ribonucleoprotein binding;0.0116254803093337!GO:0050900;leukocyte migration;0.0121992619803593!GO:0032318;regulation of Ras GTPase activity;0.0123369099068373!GO:0030134;ER to Golgi transport vesicle;0.0123931154786188!GO:0004860;protein kinase inhibitor activity;0.0124556054400033!GO:0004197;cysteine-type endopeptidase activity;0.0126549824264268!GO:0051049;regulation of transport;0.0126567762684483!GO:0030518;steroid hormone receptor signaling pathway;0.0127442599230636!GO:0030521;androgen receptor signaling pathway;0.0127442599230636!GO:0005048;signal sequence binding;0.0127476718949722!GO:0002444;myeloid leukocyte mediated immunity;0.0128725652071227!GO:0009109;coenzyme catabolic process;0.0131535173512064!GO:0043621;protein self-association;0.0132787490124254!GO:0030041;actin filament polymerization;0.0135465847693308!GO:0008637;apoptotic mitochondrial changes;0.0136452618695811!GO:0043433;negative regulation of transcription factor activity;0.0137210083815055!GO:0051345;positive regulation of hydrolase activity;0.0139531220880384!GO:0030867;rough endoplasmic reticulum membrane;0.0141572825583284!GO:0045639;positive regulation of myeloid cell differentiation;0.0144493659932615!GO:0002822;regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains.;0.0149541028715357!GO:0002819;regulation of adaptive immune response;0.0149541028715357!GO:0019882;antigen processing and presentation;0.0153149087806336!GO:0051092;activation of NF-kappaB transcription factor;0.0155123192593819!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0155452522705694!GO:0004177;aminopeptidase activity;0.0157114873606322!GO:0030258;lipid modification;0.0157854569035552!GO:0030658;transport vesicle membrane;0.0158130840518931!GO:0016779;nucleotidyltransferase activity;0.0161492163228846!GO:0030027;lamellipodium;0.016713549870143!GO:0017166;vinculin binding;0.0168416682904984!GO:0000209;protein polyubiquitination;0.0169555360579887!GO:0032763;regulation of mast cell cytokine production;0.0171317718132894!GO:0032762;mast cell cytokine production;0.0171317718132894!GO:0033367;protein localization in mast cell secretory granule;0.0171317718132894!GO:0033365;protein localization in organelle;0.0171317718132894!GO:0033371;T cell secretory granule organization and biogenesis;0.0171317718132894!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.0171317718132894!GO:0033375;protease localization in T cell secretory granule;0.0171317718132894!GO:0042629;mast cell granule;0.0171317718132894!GO:0033377;maintenance of protein localization in T cell secretory granule;0.0171317718132894!GO:0033364;mast cell secretory granule organization and biogenesis;0.0171317718132894!GO:0033380;granzyme B localization in T cell secretory granule;0.0171317718132894!GO:0033379;maintenance of protease localization in T cell secretory granule;0.0171317718132894!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.0171317718132894!GO:0033368;protease localization in mast cell secretory granule;0.0171317718132894!GO:0033366;protein localization in secretory granule;0.0171317718132894!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.0171317718132894!GO:0033374;protein localization in T cell secretory granule;0.0171317718132894!GO:0008286;insulin receptor signaling pathway;0.0172423569456334!GO:0002440;production of molecular mediator of immune response;0.0176465293791095!GO:0002250;adaptive immune response;0.0176503178266054!GO:0002460;adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains;0.0176503178266054!GO:0005813;centrosome;0.0178484794602353!GO:0045646;regulation of erythrocyte differentiation;0.0179407962181098!GO:0051059;NF-kappaB binding;0.0180254379969161!GO:0005484;SNAP receptor activity;0.0180383656845227!GO:0048500;signal recognition particle;0.0181371473594329!GO:0003725;double-stranded RNA binding;0.018400791960801!GO:0050811;GABA receptor binding;0.0185757328307426!GO:0019318;hexose metabolic process;0.0186703685828808!GO:0019210;kinase inhibitor activity;0.0189546453399313!GO:0019058;viral infectious cycle;0.0191365793291233!GO:0045576;mast cell activation;0.0191903240259!GO:0008361;regulation of cell size;0.0194211956088847!GO:0043488;regulation of mRNA stability;0.0195424547252713!GO:0043487;regulation of RNA stability;0.0195424547252713!GO:0048872;homeostasis of number of cells;0.0202757360285356!GO:0002443;leukocyte mediated immunity;0.0203950612917232!GO:0030663;COPI coated vesicle membrane;0.0206297800576824!GO:0030126;COPI vesicle coat;0.0206297800576824!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0211559751929027!GO:0000165;MAPKKK cascade;0.021566825773646!GO:0006354;RNA elongation;0.0218120546516291!GO:0005996;monosaccharide metabolic process;0.02197906482868!GO:0051347;positive regulation of transferase activity;0.02197906482868!GO:0019843;rRNA binding;0.0224587250200441!GO:0048146;positive regulation of fibroblast proliferation;0.0228005932949441!GO:0006405;RNA export from nucleus;0.022971182411789!GO:0030176;integral to endoplasmic reticulum membrane;0.022971182411789!GO:0006689;ganglioside catabolic process;0.0232455658454335!GO:0051101;regulation of DNA binding;0.0234461170741798!GO:0043022;ribosome binding;0.0234968773492976!GO:0000785;chromatin;0.0245264304875278!GO:0042348;NF-kappaB import into nucleus;0.0246052713244417!GO:0042345;regulation of NF-kappaB import into nucleus;0.0246052713244417!GO:0000287;magnesium ion binding;0.0248573869872334!GO:0051050;positive regulation of transport;0.025024861390713!GO:0051247;positive regulation of protein metabolic process;0.0250935904272162!GO:0035035;histone acetyltransferase binding;0.0254415061139401!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0256906542208141!GO:0045047;protein targeting to ER;0.0256906542208141!GO:0030660;Golgi-associated vesicle membrane;0.0257702862060701!GO:0043300;regulation of leukocyte degranulation;0.0259641321340474!GO:0002237;response to molecule of bacterial origin;0.0260391541386561!GO:0017091;AU-rich element binding;0.0261715006034585!GO:0050779;RNA destabilization;0.0261715006034585!GO:0000289;poly(A) tail shortening;0.0261715006034585!GO:0033549;MAP kinase phosphatase activity;0.0261715006034585!GO:0017017;MAP kinase tyrosine/serine/threonine phosphatase activity;0.0261715006034585!GO:0045792;negative regulation of cell size;0.02653814433338!GO:0042325;regulation of phosphorylation;0.0268542735471338!GO:0015923;mannosidase activity;0.0271484788257848!GO:0048144;fibroblast proliferation;0.0271484788257848!GO:0048145;regulation of fibroblast proliferation;0.0271484788257848!GO:0042221;response to chemical stimulus;0.0271853443075032!GO:0015631;tubulin binding;0.027466858366969!GO:0045449;regulation of transcription;0.0275463943743264!GO:0043299;leukocyte degranulation;0.0281016841166521!GO:0051329;interphase of mitotic cell cycle;0.0283607924425357!GO:0008333;endosome to lysosome transport;0.0283771741729599!GO:0051091;positive regulation of transcription factor activity;0.0284411106545432!GO:0002467;germinal center formation;0.0288043353476572!GO:0002824;positive regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains;0.0288043353476572!GO:0002821;positive regulation of adaptive immune response;0.0288043353476572!GO:0051051;negative regulation of transport;0.0295109747899642!GO:0008624;induction of apoptosis by extracellular signals;0.0302992191840758!GO:0051085;chaperone cofactor-dependent protein folding;0.0302992191840758!GO:0006414;translational elongation;0.0304616616022086!GO:0004563;beta-N-acetylhexosaminidase activity;0.0309685484895353!GO:0006351;transcription, DNA-dependent;0.0310492724119396!GO:0002573;myeloid leukocyte differentiation;0.0311360662069144!GO:0019901;protein kinase binding;0.0312091150929355!GO:0002224;toll-like receptor signaling pathway;0.0313921081035332!GO:0002221;pattern recognition receptor signaling pathway;0.0313921081035332!GO:0030118;clathrin coat;0.0316145821933707!GO:0030100;regulation of endocytosis;0.0319204536464464!GO:0030137;COPI-coated vesicle;0.031923305028478!GO:0019752;carboxylic acid metabolic process;0.0322442201170277!GO:0030308;negative regulation of cell growth;0.0323254770307614!GO:0000049;tRNA binding;0.032682971382407!GO:0046467;membrane lipid biosynthetic process;0.0328753767115224!GO:0005905;coated pit;0.0332231892375518!GO:0005788;endoplasmic reticulum lumen;0.0332460643296647!GO:0051235;maintenance of localization;0.0332460643296647!GO:0015036;disulfide oxidoreductase activity;0.0332539035536227!GO:0042611;MHC protein complex;0.0332723104460991!GO:0001776;leukocyte homeostasis;0.0336118453362549!GO:0030031;cell projection biogenesis;0.0339862813730571!GO:0006516;glycoprotein catabolic process;0.0350150079757677!GO:0032774;RNA biosynthetic process;0.0352980759536394!GO:0050727;regulation of inflammatory response;0.0357645488866282!GO:0031347;regulation of defense response;0.0357645488866282!GO:0002718;regulation of cytokine production during immune response;0.0359014603461351!GO:0002367;cytokine production during immune response;0.0359014603461351!GO:0002700;regulation of production of molecular mediator of immune response;0.0359014603461351!GO:0003727;single-stranded RNA binding;0.0359014603461351!GO:0032760;positive regulation of tumor necrosis factor production;0.03674498120432!GO:0051900;regulation of mitochondrial depolarization;0.03674498120432!GO:0045944;positive regulation of transcription from RNA polymerase II promoter;0.036917098283606!GO:0006007;glucose catabolic process;0.037673675266039!GO:0006984;ER-nuclear signaling pathway;0.0381460723574481!GO:0051881;regulation of mitochondrial membrane potential;0.0383311013634951!GO:0006082;organic acid metabolic process;0.038809475804632!GO:0006644;phospholipid metabolic process;0.0388643886765773!GO:0006509;membrane protein ectodomain proteolysis;0.038916051015617!GO:0033619;membrane protein proteolysis;0.038916051015617!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0396222979399138!GO:0016311;dephosphorylation;0.0396288709727066!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0399576288710257!GO:0043407;negative regulation of MAP kinase activity;0.040125166535934!GO:0030984;kininogen binding;0.0401613667098423!GO:0004213;cathepsin B activity;0.0401613667098423!GO:0006595;polyamine metabolic process;0.0403161156042454!GO:0045603;positive regulation of endothelial cell differentiation;0.0410653821482344!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0413027630532267!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0413027630532267!GO:0008312;7S RNA binding;0.041452549332431!GO:0046578;regulation of Ras protein signal transduction;0.0415192913910577!GO:0016049;cell growth;0.0415192913910577!GO:0042092;T-helper 2 type immune response;0.0415243359012645!GO:0035258;steroid hormone receptor binding;0.0415243359012645!GO:0042113;B cell activation;0.0415243359012645!GO:0030374;ligand-dependent nuclear receptor transcription coactivator activity;0.0417131169070357!GO:0005149;interleukin-1 receptor binding;0.0417586937948929!GO:0045746;negative regulation of Notch signaling pathway;0.0417586937948929!GO:0006650;glycerophospholipid metabolic process;0.0418785889613132!GO:0051056;regulation of small GTPase mediated signal transduction;0.042199423977637!GO:0030522;intracellular receptor-mediated signaling pathway;0.0423096620983558!GO:0045920;negative regulation of exocytosis;0.0425561181365283!GO:0043301;negative regulation of leukocyte degranulation;0.0425561181365283!GO:0043305;negative regulation of mast cell degranulation;0.0425561181365283!GO:0005669;transcription factor TFIID complex;0.0425561181365283!GO:0009306;protein secretion;0.0431264926536342!GO:0000278;mitotic cell cycle;0.0437377577668242!GO:0012506;vesicle membrane;0.0437645313561574!GO:0000118;histone deacetylase complex;0.0438804729772164!GO:0031647;regulation of protein stability;0.0441458377482957!GO:0008629;induction of apoptosis by intracellular signals;0.0441458377482957!GO:0033674;positive regulation of kinase activity;0.0444124794031058!GO:0030433;ER-associated protein catabolic process;0.0445867796522526!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0445867796522526!GO:0043071;positive regulation of non-apoptotic programmed cell death;0.0452000621642137!GO:0006914;autophagy;0.0455064098963361!GO:0006376;mRNA splice site selection;0.0455064098963361!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0455064098963361!GO:0003746;translation elongation factor activity;0.0456156163776904!GO:0008154;actin polymerization and/or depolymerization;0.0456987265938307!GO:0051325;interphase;0.0462280763877432!GO:0002697;regulation of immune effector process;0.0464739934555628!GO:0008538;proteasome activator activity;0.0464739934555628!GO:0033033;negative regulation of myeloid cell apoptosis;0.0464739934555628!GO:0001803;regulation of type III hypersensitivity;0.0464739934555628!GO:0032733;positive regulation of interleukin-10 production;0.0464739934555628!GO:0033025;regulation of mast cell apoptosis;0.0464739934555628!GO:0001805;positive regulation of type III hypersensitivity;0.0464739934555628!GO:0033023;mast cell homeostasis;0.0464739934555628!GO:0002431;Fc receptor mediated stimulatory signaling pathway;0.0464739934555628!GO:0033032;regulation of myeloid cell apoptosis;0.0464739934555628!GO:0001802;type III hypersensitivity;0.0464739934555628!GO:0033028;myeloid cell apoptosis;0.0464739934555628!GO:0042590;antigen processing and presentation of exogenous peptide antigen via MHC class I;0.0464739934555628!GO:0033026;negative regulation of mast cell apoptosis;0.0464739934555628!GO:0033024;mast cell apoptosis;0.0464739934555628!GO:0051087;chaperone binding;0.0467006363713237!GO:0007162;negative regulation of cell adhesion;0.0470493008037637!GO:0005815;microtubule organizing center;0.0473129464420128!GO:0001562;response to protozoan;0.0474451324713483!GO:0009299;mRNA transcription;0.0484587235587638!GO:0045309;protein phosphorylated amino acid binding;0.0488221245177696!GO:0000738;DNA catabolic process, exonucleolytic;0.0490068565008075!GO:0042108;positive regulation of cytokine biosynthetic process;0.0490717753312387!GO:0006661;phosphatidylinositol biosynthetic process;0.0490717753312387!GO:0051452;cellular pH reduction;0.0494530994086824!GO:0051453;regulation of cellular pH;0.0494530994086824!GO:0045851;pH reduction;0.0494530994086824
|sample_id=11879
|sample_note=
|sample_sex=male
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=
|top_motifs=NFE2:3.95286249579;SREBF1,2:3.83448302003;NFE2L2:3.78980147112;FOSL2:3.55196189912;BACH2:3.39890520715;PAX2:3.36841430663;CEBPA,B_DDIT3:3.05577737735;FOS_FOS{B,L1}_JUN{B,D}:2.9852034978;HLF:2.77326054733;SPIB:2.54611411988;SPI1:2.5458834239;ATF5_CREB3:2.40722778889;ATF4:2.28507741119;EP300:2.2809175944;NFE2L1:2.254936677;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:2.22957962368;CREB1:2.20599570433;NFKB1_REL_RELA:2.18379411337;FOXP3:2.16744372319;NANOG{mouse}:2.14991503339;ETS1,2:2.10812048112;ATF6:1.98445812595;FOXN1:1.98043602446;DMAP1_NCOR{1,2}_SMARC:1.77917249547;JUN:1.65950717829;RUNX1..3:1.49412931276;NR1H4:1.47650532311;NFIL3:1.37608496235;HES1:1.35854628799;MAFB:1.30091154883;PAX3,7:1.27606220393;STAT2,4,6:1.18950263271;HSF1,2:1.13457483934;BPTF:1.13261310601;ELF1,2,4:1.00551910219;ATF2:1.0042662376;IRF1,2:1.00045869026;HMX1:0.973765387675;RXRA_VDR{dimer}:0.970053520596;TGIF1:0.927504522713;GLI1..3:0.92284246524;SMAD1..7,9:0.868264757968;PDX1:0.852814734699;FOXD3:0.766739753369;ZBTB16:0.76031389023;IRF7:0.755842471526;ESR1:0.738054758971;NANOG:0.736907423904;TLX2:0.621851602655;HIF1A:0.619530783544;PITX1..3:0.586494797302;TFCP2:0.558938696106;ESRRA:0.519267347442;NFATC1..3:0.513604224728;ALX1:0.503756204117;PAX8:0.379304336009;TBP:0.377784312491;HMGA1,2:0.359449674338;PPARG:0.336533961714;HBP1_HMGB_SSRP1_UBTF:0.302485401199;FOXO1,3,4:0.281863524867;FOXP1:0.246322996408;AHR_ARNT_ARNT2:0.182322447059;EGR1..3:0.148239458934;ALX4:0.140208107989;XBP1:0.110037141494;IKZF2:0.0559135483181;HOX{A5,B5}:0.0470045882197;FOX{F1,F2,J1}:0.0237956296191;MEF2{A,B,C,D}:0.0222549399541;SRF:-0.0169035194609;PRDM1:-0.0292350586324;NR6A1:-0.0299772865649;FOX{D1,D2}:-0.0395131493732;CDX1,2,4:-0.0953543840427;STAT5{A,B}:-0.122304247117;OCT4_SOX2{dimer}:-0.12298074693;MYB:-0.22225463839;GATA4:-0.242942709197;EN1,2:-0.305587989711;FOXL1:-0.316422588316;RFX2..5_RFXANK_RFXAP:-0.32423331176;POU2F1..3:-0.371800839248;MZF1:-0.413089620874;NKX6-1,2:-0.416253009534;STAT1,3:-0.515945146605;PAX1,9:-0.5249461371;SPZ1:-0.534914357381;HOXA9_MEIS1:-0.56020213408;HNF4A_NR2F1,2:-0.597962266275;T:-0.599942450375;RREB1:-0.603678483664;FOXM1:-0.608299008959;RBPJ:-0.629202931174;MYFfamily:-0.66836797284;PAX4:-0.668434338753;VSX1,2:-0.689390523949;PATZ1:-0.696257077234;POU5F1:-0.702390815945;IKZF1:-0.70699618837;SOX2:-0.740049773083;REST:-0.746191146136;NKX3-1:-0.746531738891;RXR{A,B,G}:-0.758020111142;NHLH1,2:-0.808218642182;TFAP4:-0.810366786624;TBX4,5:-0.841024385336;ZNF238:-0.846411013433;ZNF148:-0.867551135146;HNF1A:-0.918342059361;MED-1{core}:-0.924805678073;RORA:-0.93557611074;PRRX1,2:-0.976063517734;GATA6:-0.976866307398;ZFP161:-0.986382379487;GZF1:-1.00423936282;CUX2:-1.01207460753;DBP:-1.0320080845;PAX6:-1.04165994633;MTF1:-1.06325529426;TFAP2B:-1.06376025277;POU6F1:-1.06961438608;ZBTB6:-1.07380658462;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.09939956554;ZIC1..3:-1.10197819246;MTE{core}:-1.10379828832;NFIX:-1.12220078537;TAL1_TCF{3,4,12}:-1.18511406268;TFAP2{A,C}:-1.20786332909;TOPORS:-1.2190436858;MYOD1:-1.23619465262;NKX2-2,8:-1.2377275054;GCM1,2:-1.24866539484;SP1:-1.26761402586;TFDP1:-1.26866334246;HOX{A6,A7,B6,B7}:-1.31261780455;GTF2A1,2:-1.33645720746;SOX5:-1.35649525741;GTF2I:-1.39111273969;ZNF384:-1.39173425771;SOX{8,9,10}:-1.4372030586;TEAD1:-1.43739169926;UFEwm:-1.45700214999;CRX:-1.45771927999;TLX1..3_NFIC{dimer}:-1.48242795941;ZEB1:-1.5124528782;AIRE:-1.52632755249;HIC1:-1.52878549071;XCPE1{core}:-1.53714952252;ONECUT1,2:-1.54021981981;TP53:-1.54495423059;KLF4:-1.55204100009;RFX1:-1.56204520661;MAZ:-1.56939275571;NKX2-3_NKX2-5:-1.58854656815;MYBL2:-1.58858421317;E2F1..5:-1.58960830704;POU3F1..4:-1.60534745656;BREu{core}:-1.60866170209;ELK1,4_GABP{A,B1}:-1.61783192417;NKX3-2:-1.67981662167;bHLH_family:-1.68207648659;FOXA2:-1.69716120616;NKX2-1,4:-1.69936844659;HOX{A4,D4}:-1.70690858069;NR3C1:-1.713415496;ADNP_IRX_SIX_ZHX:-1.71934171367;TEF:-1.75132120753;LMO2:-1.84796977945;SNAI1..3:-1.86346945346;EVI1:-1.9277762901;EBF1:-1.94361868912;AR:-1.94833456877;POU1F1:-1.95557636567;NR5A1,2:-1.99187063934;FOXQ1:-2.07182291755;PAX5:-2.10432755218;ZNF423:-2.14389694987;SOX17:-2.16834235258;ARID5B:-2.22720475319;NFY{A,B,C}:-2.23416633845;CDC5L:-2.28877504094;GFI1B:-2.33136843416;LHX3,4:-2.4752814735;YY1:-2.52766478961;FOX{I1,J2}:-2.53290572369;NRF1:-2.62892705689;PBX1:-2.76898064878;GFI1:-2.81556569166;HAND1,2:-2.89011028645;ZNF143:-3.12946887939;LEF1_TCF7_TCF7L1,2:-3.37374023792
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11879-125C7;search_select_hide=table117:FF:11879-125C7
}}
}}

Latest revision as of 18:26, 4 June 2020

Name:CD14+ monocytes - treated with B-glucan, donor2
Species:Human (Homo sapiens)
Library ID:CNhs13489
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueNA
dev stageNA
sexmale
age51
cell typemonocyte
cell lineNA
companyNA
collaborationChristine Wells (University of Queensland)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberD4-10
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00004841
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs13489 CAGE DRX008136 DRR009008
Accession ID Hg19

Library idBAMCTSS
CNhs13489 DRZ000433 DRZ001818
Accession ID Hg38

Library idBAMCTSS
CNhs13489 DRZ011783 DRZ013168
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0.422
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.0562
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0.485
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.493
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190.15
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40.212
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0.773
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.261
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0.422
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0.349
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.386
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.426
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.107
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.773
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40.261
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0.261
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.309
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0.15
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.137
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0.54
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.771
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0.485
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.784
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0.627
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.485
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0.897
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.494
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40.15
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.556
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0.773
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0.349
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40.302
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.705
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0.731
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340.261
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.742
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.228
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0.15
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0.54
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0.15
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.349
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0.15
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0.924
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0.15
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0.261
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0.15
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340.15
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0.15
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13489

Jaspar motifP-value
MA0002.23.07849e-6
MA0003.10.46
MA0004.10.14
MA0006.10.856
MA0007.10.775
MA0009.10.246
MA0014.10.911
MA0017.10.0816
MA0018.20.0315
MA0019.10.709
MA0024.10.00202
MA0025.10.00953
MA0027.10.881
MA0028.10.0628
MA0029.10.339
MA0030.10.2
MA0031.10.398
MA0035.20.281
MA0038.10.146
MA0039.20.79
MA0040.10.626
MA0041.10.278
MA0042.10.326
MA0043.13.69393e-6
MA0046.10.0109
MA0047.20.61
MA0048.10.814
MA0050.12.75947e-4
MA0051.10.13
MA0052.10.00128
MA0055.10.92
MA0057.10.445
MA0058.10.0275
MA0059.10.116
MA0060.12.5311e-9
MA0061.18.04001e-8
MA0062.20.763
MA0065.20.0155
MA0066.10.0666
MA0067.12.61233e-6
MA0068.10.157
MA0069.10.736
MA0070.10.0228
MA0071.10.291
MA0072.10.98
MA0073.10.438
MA0074.10.186
MA0076.10.0611
MA0077.10.221
MA0078.10.557
MA0079.20.328
MA0080.26.38771e-14
MA0081.14.06515e-4
MA0083.10.711
MA0084.10.408
MA0087.10.718
MA0088.10.333
MA0090.10.222
MA0091.10.489
MA0092.10.337
MA0093.10.146
MA0099.29.54845e-44
MA0100.10.47
MA0101.13.93478e-7
MA0102.25.49247e-7
MA0103.10.342
MA0104.20.262
MA0105.13.2548e-11
MA0106.10.979
MA0107.11.26037e-8
MA0108.20.341
MA0111.10.501
MA0112.26.33189e-5
MA0113.10.978
MA0114.10.189
MA0115.10.606
MA0116.15.02966e-4
MA0117.10.0684
MA0119.10.428
MA0122.10.81
MA0124.10.393
MA0125.10.303
MA0131.10.385
MA0135.10.81
MA0136.18.62818e-15
MA0137.20.465
MA0138.20.557
MA0139.10.806
MA0140.10.267
MA0141.10.12
MA0142.10.402
MA0143.10.623
MA0144.10.142
MA0145.10.378
MA0146.10.141
MA0147.10.387
MA0148.10.498
MA0149.10.151
MA0150.12.7555e-22
MA0152.10.855
MA0153.10.00485
MA0154.10.00165
MA0155.10.943
MA0156.13.45434e-7
MA0157.10.924
MA0159.10.0196
MA0160.10.0255
MA0162.10.705
MA0163.13.53616e-7
MA0164.10.562
MA0258.10.00506
MA0259.10.759



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13489

Novel motifP-value
10.101
100.0212
1000.773
1010.871
1020.604
1030.386
1040.604
1050.145
1063.19758e-4
1070.244
1080.969
1090.315
110.191
1100.255
1110.0358
1120.319
1130.421
1140.0193
1150.25
1160.944
1170.0667
1180.193
1190.106
120.352
1200.682
1210.474
1220.644
1230.0871
1240.455
1250.436
1260.284
1270.458
1280.031
1290.507
130.153
1300.128
1310.805
1320.0547
1330.704
1340.726
1350.759
1360.984
1370.0138
1380.289
1390.0337
140.511
1400.159
1410.346
1420.2
1430.0304
1440.602
1450.521
1460.479
1470.462
1480.0112
1490.81
150.159
1500.465
1510.384
1520.122
1530.416
1540.495
1550.671
1560.577
1570.293
1580.0132
1590.818
160.352
1600.428
1610.549
1620.248
1630.144
1640.0971
1650.23
1660.466
1670.142
1680.365
1690.0091
170.224
180.119
190.424
20.813
200.261
210.432
220.233
230.0473
240.342
250.413
260.054
270.718
280.434
290.359
30.139
300.495
310.779
320.721
330.475
340.583
350.163
360.161
370.0606
380.377
390.796
40.938
400.182
410.00974
420.428
430.0287
440.941
450.679
460.18
470.638
480.589
490.0994
50.314
500.945
510.463
520.33
530.383
540.39
550.553
560.685
570.77
580.144
590.188
60.657
600.0539
610.642
620.0732
630.534
640.414
650.217
660.301
670.56
680.827
690.831
70.294
700.0283
710.0335
720.287
730.109
740.227
750.12
760.163
770.507
780.0835
790.559
80.44
800.327
810.354
820.157
830.0245
840.205
850.011
860.0305
870.633
880.657
890.249
90.435
900.111
910.256
920.187
930.277
940.0556
950.457
960.361
970.799
980.126
990.0565



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs13489


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000766 (myeloid leukocyte)
0000219 (motile cell)
0000325 (stuff accumulating cell)
0000473 (defensive cell)
0000234 (phagocyte)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0000255 (eukaryotic cell)
0000576 (monocyte)
0000860 (classical monocyte)
0002057 (CD14-positive, CD16-negative classical monocyte)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000625 (experimental infection sample)
0000350 (experimentally modified sample)
0000630 (beta-glucan treatment sample)
0011102 (human CD14-positive monocytes - treated with B-glucan sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)
CL:0002057 (CD14-positive, CD16-negative classical monocyte)

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