FF:370-44C7: Difference between revisions
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{{f5samples | {{f5samples | ||
| | |DRA_sample_Accession=CAGE@SAMD00005549 | ||
| | |accession_numbers=CAGE;DRX009068;DRR009942;DRZ001367;DRZ002750;DRZ012717;DRZ014100 | ||
| | |ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0000955,UBERON:0000007,UBERON:0001894,UBERON:0000479,UBERON:0004121,UBERON:0003296,UBERON:0010133,UBERON:0010314,UBERON:0011216,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000481,UBERON:0000073,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0002368,UBERON:0002616,UBERON:0002780,UBERON:0002530,UBERON:0010317,UBERON:0001017,UBERON:0001016,UBERON:0001890,UBERON:0000949 | ||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
| | |ancestors_in_ff_facet=FF:0000102,FF:0000101,FF:0000103,FF:0000001,FF:0000999,FF:0000292,FF:0000004,FF:0000293,FF:0011325 | ||
|comment= | |||
|created_by= | |||
|creation_date= | |||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |||
|expression_enrichment_score=chr13:55932591..55932622,-!p1@Pitx1!2.24!206.72!Pitx1;;chr12:74040861..74040875,+!p1@Six6!2.13!132.72!Six6;;chr2:26062055..26062100,-!p1@Lhx3!2.06!112.80!Lhx3;;chr12:74147689..74147711,-!p1@Six1!2.04!228.32!Six1;;chr13:99124189..99124205,+!p1@Foxd1!1.99!145.40!Foxd1;;chr11:50767247..50767270,-!p1@Prop1!1.92!82.53!Prop1;;chr12:74040895..74040916,+!p2@Six6!1.89!75.93!Six6;;chrX:58146612..58146615,-!p1@Sox3!1.84!67.53!Sox3;;chr18:66098702..66098742,-!p1@Rax!1.82!64.94!Rax;;chr17:86020510..86020589,+!p3@Six3!1.74!54.33!Six3;;chr3:128916868..128916890,+!p1@Pitx2!1.62!54.72!Pitx2;;chr17:86087592..86087615,-!p1@Six2!1.61!39.71!Six2;;chrX:108009761..108009788,+!p1@Pou3f4!1.60!39.20!Pou3f4;;chr4:109650609..109650653,+!p1@Dmrta2!1.58!37.13!Dmrta2;;chr13:55932624..55932641,-!p2@Pitx1!1.50!30.79!Pitx1;;chr3:34548909..34548927,+!p1@Sox2!1.48!49.16!Sox2;;chr5:38215819..38215823,-!p1@Msx1!1.47!73.48!Msx1;;chr10:86956396..86956411,-!p1@Ascl1!1.46!42.30!Ascl1;;chr14:122874619..122874634,+!p1@Zic2!1.46!27.68!Zic2;;chr13:31898767..31898785,+!p4@Foxc1!1.44!32.21!Foxc1;;chr13:55937467..55937516,-!p3@Pitx1!1.44!26.26!Pitx1;;chr12:3891810..3891829,+!p2@Dnmt3a!1.41!37.77!Dnmt3a;;chr17:86020156..86020183,+!p1@Six3!1.41!24.84!Six3;;chr2:146047829..146047847,+!p1@Insm1!1.39!41.65!Insm1;;chr12:34642510..34642530,+!p1@Twist1!1.38!71.79!Twist1;;chr8:12395603..12395621,+!p1@Sox1!1.35!21.21!Sox1;;chr9:91260616..91260653,-!p2@Zic1!1.33!20.44!Zic1;;chr10:119913310..119913366,-!p1@Hmga2!1.32!151.87!Hmga2;;chr9:91260594..91260612,-!p1@Zic1!1.31!19.53!Zic1;;chr10:119913278..119913298,-!p2@Hmga2!1.27!39.07!Hmga2;;chr2:38206744..38206766,+!p1@Lhx2!1.26!20.70!Lhx2;;chr17:86020115..86020128,+!p2@Six3!1.26!17.08!Six3;;chr3:128917187..128917223,+!p2@Pitx2!1.24!19.27!Pitx2;;chr13:55937432..55937460,-!p4@Pitx1!1.21!15.39!Pitx1;;chr7:56892217..56892221,-!p1@Dbx1!1.20!15.01!Dbx1;;chr2:146911200..146911219,-!p1@Nkx2-4!1.20!14.75!Nkx2-4;;chr12:57636240..57636256,-!p4@Nkx2-1!1.19!14.36!Nkx2-1;;chr8:123640063..123640077,+!p1@Foxc2!1.18!25.74!Foxc2;;chr12:74147860..74147888,-!p2@Six1!1.18!14.23!Six1;;chr13:31717548..31717596,+!p1@Foxf2!1.17!27.42!Foxf2;;chr3:34548946..34548972,+!p2@Sox2!1.17!15.26!Sox2;;chr12:28027561..28027591,-!p1@Sox11!1.13!82.66!Sox11;;chr2:38206580..38206600,+!p2@Lhx2!1.13!15.39!Lhx2;;chr17:86020468..86020504,+!p6@Six3!1.10!11.51!Six3;;chr10:126778916..126778974,-!p1@Gli1!1.09!25.35!Gli1;;chr13:117099847..117099907,-!p1@Isl1!1.07!20.05!Isl1;;chr14:27813852..27813865,+!p1@Hesx1!1.04!9.96!Hesx1;;chr3:127336052..127336058,+!p1@Neurog2!1.03!9.83!Neurog2;;chr17:86012772..86012825,+!p4@Six3!1.03!9.83!Six3;;chr10:119913546..119913583,-!p3@Hmga2!1.02!20.31!Hmga2;;chr10:119914001..119914078,-!p4@Hmga2!1.02!12.94!Hmga2;;chr14:49287186..49287225,-!p1@Otx2!1.02!9.57!Otx2;;chr12:57636220..57636236,-!p3@Nkx2-1!1.02!9.57!Nkx2-1;;chr2:147190749..147190769,+!p1@Pax1!1.02!9.44!Pax1;;chr3:128902837..128902861,+!p3@Pitx2!1.01!9.31!Pitx2;;chr5:148000254..148000260,+!p1@Gsx1!1.01!9.18!Gsx1;;chr19:19185671..19185693,-!p1@Rorb!1.00!21.86!Rorb;;chr9:99776566..99776612,-!p1@Sox14!1.00!8.93!Sox14;;chr12:3891753..3891801,+!p4@Dnmt3a!0.99!14.36!Dnmt3a;;chr14:52948124..52948148,-!p7@Sall2!0.99!8.80!Sall2;;chr12:74040716..74040745,+!p3@Six6!0.99!8.67!Six6;;chr13:31898729..31898761,+!p1@Foxc1!0.98!21.47!Foxc1;;chr4:154335024..154335039,+!p1@Hes5!0.98!10.35!Hes5;;chr12:74147842..74147856,-!p3@Six1!0.98!8.54!Six1;;chr2:71384802..71384815,-!p1@Dlx2!0.97!10.48!Dlx2;;chr13:99124236..99124243,+!p2@Foxd1!0.97!8.28!Foxd1;;chr3:8666963..8666978,-!p1@Hey1!0.96!54.33!Hey1;;chr2:26063801..26063813,-!p2@Lhx3!0.96!8.02!Lhx3;;chr15:103164702..103164778,-!p3@Zfp385a!0.94!9.18!Zfp385a;;chr8:24780125..24780143,+!p1@Zmat4!0.93!11.00!Zmat4;;chr7:52471143..52471186,+!p1@Tead2!0.91!78.78!Tead2;;chr14:52634234..52634281,-!p3@Zfp219!0.91!20.44!Zfp219;;chr7:52472041..52472065,+!p2@Tead2!0.91!8.41!Tead2;;chrX:108009734..108009752,+!p2@Pou3f4!0.91!7.11!Pou3f4;;chr2:79296783..79296801,-!p1@Neurod1!0.89!6.73!Neurod1;;chr13:31898637..31898653,+!p2@Foxc1!0.88!12.16!Foxc1;;chr3:128916838..128916856,+!p4@Pitx2!0.87!6.47!Pitx2;;chr6:88148650..88148669,+!p1@Gata2!0.86!54.98!Gata2;;chr3:99057269..99057306,+!p1@Tbx15!0.86!7.76!Tbx15;;chrX:55284180..55284195,+!p2@Zic3!0.86!6.21!Zic3;;chr7:17647736..17647772,-!p1@Hif3a!0.85!22.64!Hif3a;;chr11:90251852..90251855,-!p4@Hlf!0.85!7.63!Hlf;;chr9:106356211..106356242,+!p1@Pcbp4!0.84!123.54!Pcbp4;;chr14:17407970..17408015,-!p2@Rarb!0.84!16.82!Rarb;;chr3:34549096..34549111,+!p3@Sox2!0.84!5.95!Sox2;;chr10:119913792..119913820,-!p5@Hmga2!0.82!10.09!Hmga2;;chr17:35031460..35031518,+!p1@Zbtb12!0.81!29.24!Zbtb12;;chr13:31898496..31898519,+!p3@Foxc1!0.81!9.06!Foxc1;;chr3:107398056..107398082,+!p1@Alx3!0.81!5.43!Alx3;;chr9:87626083..87626108,-!p1@Tbx18!0.80!12.29!Tbx18;;chr5:24107676..24107722,-!p4@Smarcd3!0.79!7.11!Smarcd3;;chr4:114581497..114581519,-!p2@Foxd2!0.79!5.17!Foxd2;;chr3:8666997..8667012,-!p2@Hey1!0.77!12.03!Hey1;;chrX:108009798..108009815,+!p3@Pou3f4!0.77!4.92!Pou3f4;;chr11:90252223..90252240,-!p1@Hlf!0.76!43.34!Hlf;;chr17:48061584..48061601,-!p2@Foxp4!0.76!33.76!Foxp4;;chr2:147190725..147190747,+!p2@Pax1!0.76!4.79!Pax1;;chr14:118636238..118636257,-!p2@Sox21!0.76!4.79!Sox21;;chr6:23198371..23198390,-!p1@Fezf1!0.76!4.79!Fezf1;;chr19:7342725..7342784,+!p1@Rcor2!0.75!20.70!Rcor2;;chr7:116154364..116154444,+!p1@Tub!0.75!8.41!Tub;;chr17:86020137..86020149,+!p5@Six3!0.75!4.66!Six3;;chr12:57796615..57796687,+!p1@Pax9!0.74!4.53!Pax9;;chr10:12810631..12810649,+!p1@Plagl1!0.73!127.55!Plagl1;;chr14:17407878..17407926,-!p1@Rarb!0.73!10.48!Rarb;;chr5:120121169..120121171,+!p4@Tbx3!0.73!8.28!Tbx3;;chr4:114581524..114581551,-!p1@Foxd2!0.73!6.86!Foxd2;;chr12:74147444..74147463,-!p4@Six1!0.73!4.40!Six1;;chr17:86020186..86020195,+!p9@Six3!0.73!4.40!Six3;;chr2:163028808..163028869,+!p1@Tox2!0.72!16.95!Tox2;;chr11:3189683..3189744,+!p2@Patz1!0.72!9.31!Patz1;;chr2:71367871..71367898,+!p1@Dlx1!0.72!4.27!Dlx1;;chr7:25292331..25292421,+!p1@Zfp428!0.71!33.25!Zfp428;;chr2:156666727..156666753,+!p2@Tgif2!0.71!6.47!Tgif2;;chr9:98855847..98855866,+!p3@Foxl2!0.71!4.14!Foxl2;;chr8:12395670..12395682,+!p3@Sox1!0.70!4.01!Sox1;;chr8:123651727..123651748,+!p1@ENSMUST00000062634!0.70!4.01!Foxl1;;chr18:66098673..66098684,-!p2@Rax!0.70!4.01!Rax;;chr14:122874593..122874610,+!p2@Zic2!0.70!4.01!Zic2;;chr13:31717597..31717613,+!p2@Foxf2!0.70!4.01!Foxf2;;chr13:48356475..48356492,+!p1@Id4!0.69!97.41!Id4;;chr5:120121446..120121461,+!p2@Tbx3!0.69!14.36!Tbx3;;chr17:35031524..35031539,+!p4@Zbtb12!0.69!5.30!Zbtb12;;chr19:59533221..59533271,+!p1@Emx2!0.69!4.92!Emx2;;chr14:52948033..52948045,-!p12@Sall2!0.69!3.88!Sall2;;chr14:52935876..52935928,-!p1@Sall2!0.68!35.57!Sall2;;chr2:130120884..130120972,+!p1@Ebf4!0.68!25.22!Ebf4;;chr11:90250944..90250982,-!p2@Hlf!0.68!6.73!Hlf;;chr3:101814061..101814094,+!p1@Nhlh2!0.68!3.75!Nhlh2;;chr15:75447162..75447217,+!p2@Zfp41!0.67!12.16!Zfp41;;chr8:90483459..90483475,-!p1@Zfp423!0.67!11.25!Zfp423;;chr16:18587076..18587106,-!p1@Tbx1!0.67!5.56!Tbx1;;chr1:42752574..42752621,+!p@chr1:42752574..42752621,+!0.67!4.79!Pou3f3;;chr4:150503457..150503498,-!p3@Camta1!0.67!4.27!Camta1;;chr7:6649134..6649167,-!p1@Zim1!0.66!22.38!Zim1;;chr7:135019147..135019187,-!p3@Zfp668!0.66!8.54!Zfp668;;chr9:98855868..98855895,+!p1@Foxl2!0.66!3.62!Foxl2;;chr9:55388997..55389016,+!p1@Isl2!0.65!3.49!Isl2;;chr7:77511234..77511302,-!p2@Nr2f2!0.64!26.26!Nr2f2;;chr2:152223783..152223812,-!p4@Sox12!0.64!8.67!Sox12;;chr17:27693746..27693759,+!p6@Hmga1-rs1,p7@Hmga1!0.64!7.37!Hmga1;;chr10:79896129..79896163,-!p6@Tcf3!0.64!5.56!Tcf3;;chr12:105711446..105711464,-!p1@Gsc!0.64!3.36!Gsc;;chr16:91225808..91225824,+!p1@Olig2!0.64!3.36!Olig2;;chr17:86020293..86020318,+!p7@Six3!0.64!3.36!Six3;;chr2:31495237..31495243,+!p1@Prdm12!0.64!3.36!Prdm12;;chr3:128902878..128902893,+!p6@Pitx2!0.64!3.36!Pitx2;;chr12:57636034..57636087,-!p1@Nkx2-1!0.64!3.36!Nkx2-1;;chr13:95645580..95645598,+!p1@Otp!0.64!3.36!Otp;;chr14:27813891..27813902,+!p3@Hesx1!0.64!3.36!Hesx1;;chr11:3190303..3190351,+!p3@Patz1!0.63!7.11!Patz1;;chr12:57637732..57637777,-!p5@Nkx2-1!0.63!3.23!Nkx2-1;;chr17:86087581..86087588,-!p2@Six2!0.63!3.23!Six2;;chr8:72356532..72356611,+!p1@Pbx4!0.62!15.26!Pbx4;;chr14:56443806..56443848,+!p1@Nfatc4!0.62!7.11!Nfatc4;;chr17:35031589..35031630,+!p2@Zbtb12!0.62!6.34!Zbtb12;;chr8:90483433..90483457,-!p2@Zfp423!0.62!4.53!Zfp423;;chr15:102034510..102034549,+!p4@Zfp740!0.61!8.41!Zfp740;;chr8:12395874..12395885,+!p2@Sox1!0.61!3.10!Sox1;;chr10:61595830..61595846,+!p1@Neurog3!0.61!3.10!Neurog3;;chr10:119913266..119913277,-!p6@Hmga2!0.61!3.10!Hmga2;;chr11:85646303..85646329,+!p1@Tbx2!0.60!23.80!Tbx2;;chr4:128483680..128483715,-!p3@Zfp362!0.60!12.81!Zfp362;;chr19:7342786..7342803,+!p2@Rcor2!0.60!4.27!Rcor2;;chr14:118636214..118636235,-!p1@Sox21!0.60!3.75!Sox21;;chrX:55283799..55283813,+!p1@Zic3!0.60!2.98!Zic3;;chr10:50614546..50614568,+!p@chr10:50614546..50614568,+!0.60!2.98!Sim1;;chr11:21901608..21901634,-!p1@Otx1!0.60!2.98!Otx1;;chr6:48395825..48395846,-!p3@Zfp467!0.59!13.07!Zfp467;;chr14:56443698..56443726,+!p2@Nfatc4!0.59!6.08!Nfatc4;;chr8:123640090..123640101,+!p2@Foxc2!0.59!3.36!Foxc2;;chr7:77505617..77505632,-!p1@Nr2f2!0.58!159.76!Nr2f2;;chr12:9581262..9581282,+!p1@Osr1!0.58!40.88!Osr1;;chr4:128483534..128483613,-!p1@Zfp362!0.58!23.93!Zfp362;;chr7:91558392..91558434,-!p1@Arnt2!0.58!9.06!Arnt2;;chr16:65520838..65520853,+!p1@ENSMUST00000004964!0.58!2.85!Pou1f1;;chr17:86020336..86020352,+!p8@Six3!0.58!2.85!Six3;;chr12:57636178..57636194,-!p2@Nkx2-1!0.58!2.85!Nkx2-1;;chr11:99092233..99092273,-!p2@Smarce1!0.57!15.91!Smarce1;;chr12:34642682..34642753,+!p2@Twist1!0.57!8.41!Twist1;;chr6:14851440..14851497,+!p2@Foxp2!0.57!7.63!Foxp2;;chr1:170361991..170362015,-!p6@Pbx1!0.57!6.99!Pbx1;;chr4:154010228..154010244,-!p4@Prdm16!0.57!4.01!Prdm16;;chr7:108966820..108966835,+!p1@Phox2a!0.57!2.72!Phox2a;;chr12:57637882..57637924,-!p6@Nkx2-1!0.57!2.72!Nkx2-1;;chr14:122874718..122874729,+!p3@Zic2!0.57!2.72!Zic2;;chr9:9977661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fp608!0.26!3.88!Zfp608;;chr2:166888481..166888548,-!p3@Znfx1!0.26!3.62!Znfx1;;chr10:127896315..127896333,+!p2@Smarcc2!0.26!3.62!Smarcc2;;chr9:63605691..63605705,-!p3@Smad3!0.26!3.49!Smad3;;chr8:81923398..81923409,-!p4@Smad1!0.26!3.36!Smad1;;chr11:87881818..87881834,+!p4@Vezf1!0.26!3.36!Vezf1;;chr14:76903992..76904056,+!p6@Tsc22d1!0.26!2.59!Tsc22d1;;chr7:87171256..87171280,+!p4@Zfp710!0.26!2.46!Zfp710;;chr7:25862363..25862382,+!p2@Zfp574!0.26!2.20!Zfp574;;chr4:54957886..54957907,+!p3@Zfp462!0.26!2.07!Zfp462;;chr8:72498017..72498059,-!p13@Gatad2a!0.26!1.94!Gatad2a;;chr11:85646469..85646488,+!p5@Tbx2!0.26!1.68!Tbx2;;chr6:99471223..99471254,-!p7@Foxp1!0.26!1.68!Foxp1;;chr15:103085660..103085681,-!p1@Nfe2!0.26!1.68!Nfe2;;chr10:119913839..119913869,-!p7@Hmga2!0.26!1.29!Hmga2;;chr16:98073382..98073395,-!p4@Prdm15!0.26!1.29!Prdm15;;chr6:14851344..14851364,+!p6@Foxp2!0.26!1.16!Foxp2;;chr7:26067803..26067814,+!p11@Cic!0.26!1.03!Cic;;chr17:57170891..57170961,-!p1@Khsrp!0.25!143.98!Khsrp;;chr9:21420674..21420725,+!p1@Smarca4!0.25!127.03!Smarca4;;chr19:53384985..53385042,+!p1@Mxi1!0.25!49.54!Mxi1;;chr8:108378986..108379049,+!p1@Thap11!0.25!37.26!Thap11;;chr9:113840108..113840184,+!p2@Ubp1!0.25!14.36!Ubp1;;chr14:55482892..55482988,-!p1@Homez!0.25!10.22!Homez;;chr14:52640373..52640412,-!p1@Zfp219!0.25!8.80!Zfp219;;chr14:100683672..100683717,-!p1@Klf12!0.25!6.86!Klf12;;chr9:32443818..32443854,+!p2@Ets1!0.25!6.47!Ets1;;chr4:151401741..151401793,-!p1@Zbtb48!0.25!6.21!Zbtb48;;chr15:57526469..57526534,+!p1@Zhx2!0.25!5.04!Zhx2;;chr17:56970339..56970428,-!p1@Rfx2!0.25!4.27!Rfx2;;chr6:117791276..117791304,+!p2@Zfp637!0.25!3.88!Zfp637;;chrX:98449805..98449834,+!p3@Foxo4!0.25!3.75!Foxo4;;chr13:22036953..22037009,+!p1@Zfp184!0.25!3.49!Zfp184;;chr11:5761979..5761992,+!p2@Aebp1!0.25!2.46!Aebp1;;chr2:181327403..181327432,-!p3@Znf512b!0.25!2.33!Znf512b;;chr7:4947625..4947634,-!p6@Zfp579!0.25!1.81!Zfp579;;chr8:124984566..124984595,-!p1@Snai3!0.25!1.68!Snai3;;chr8:72356384..72356434,+!p2@Pbx4!0.25!1.68!Pbx4;;chr7:52960663..52960677,+!p6@Dbp!0.25!0.78!Dbp;;chr8:87238155..87238187,-!p13@Nfix!0.25!0.78!Nfix;;chr9:91263649..91263666,+!p3@Zic4!0.25!0.78!Zic4;;chr19:55969923..55969944,+!p6@Tcf7l2!0.25!0.78!Tcf7l2;;chr2:181501988..181502026,+!p3@Myt1!0.25!0.78!Myt1;;chr19:59244875..59244895,-!p2@Vax1!0.25!0.78!Vax1;;chr19:59533139..59533152,+!p2@Emx2!0.25!0.78!Emx2;;chr1:169528823..169528860,+!p5@Rxrg!0.25!0.78!Rxrg;;chr19:59533163..59533185,+!p3@Emx2!0.25!0.78!Emx2;;chr15:102196790..102196799,-!p3@Sp7!0.25!0.78!Sp7;;chr12:57637595..57637608,-!p7@Nkx2-1!0.25!0.78!Nkx2-1;;chr15:37163124..37163153,+!p3@Grhl2!0.25!0.78!Grhl2;;chr12:30213247..30213333,+!p1@Myt1l!0.25!0.78!Myt1l;;chr3:99044284..99044308,+!p4@Tbx15!0.25!0.78!Tbx15;;chr4:22415290..22415307,-!p2@Pou3f2!0.25!0.78!Pou3f2;;chr6:144157991..144158007,-!p9@Sox5!0.25!0.78!Sox5;;chr6:85137520..85137563,+!p1@Emx1!0.25!0.78!Emx1;;chr1:136456767..136456790,+!p2@Kdm5b!0.24!32.34!Kdm5b;;chr5:143996822..143996930,+!p1@Zfp12!0.24!31.95!Zfp12;;chr12:16817746..16817784,+!p1@E2f6!0.24!27.04!E2f6;;chr4:118846783..118846826,-!p1@Zfp691!0.24!20.83!Zfp691;;chr5:134790384..134790418,-!p2@Gtf2i!0.24!19.66!Gtf2i;;chr16:4594683..4594735,+!p2@Glis2!0.24!19.66!Glis2;;chr2:181100122..181100143,+!p2@Zgpat!0.24!14.75!Zgpat;;chr17:4994904..4994953,+!p3@Arid1b!0.24!11.64!Arid1b;;chr3:94176733..94176794,+!p1@Rorc!0.24!11.51!Rorc;;chr16:22439654..22439676,-!p2@Etv5!0.24!8.67!Etv5;;chr16:17530781..17530882,-!p2@Thap7!0.24!8.54!Thap7;;chr3:94641455..94641486,+!p4@Pogz!0.24!3.36!Pogz;;chr9:32349240..32349276,-!p2@Fli1!0.24!2.98!Fli1;;chr12:87027598..87027652,+!p1@Batf!0.24!2.85!Batf;;chr10:80812991..80813004,-!p3@Hmg20b!0.24!2.46!Hmg20b;;chr18:60720468..60720472,+!p2@Rbm22!0.24!2.33!Rbm22;;chr2:30700881..30700916,+!p1@Prrx2!0.24!2.20!Prrx2;;chr11:85646427..85646451,+!p4@Tbx2!0.24!1.94!Tbx2;;chr11:121380594..121380609,-!p2@Zfp750!0.24!1.94!Zfp750;;chr8:111227493..111227517,+!p@chr8:111227493..111227517,+!0.24!1.94!Zfhx3;;chr18:14131045..14131062,-!p3@Zfp521!0.24!1.68!Zfp521;;chr19:28754600..28754612,-!p2@Glis3!0.24!1.68!Glis3;;chr7:5003102..5003113,+!p4@Zfp580!0.24!1.42!Zfp580;;chr6:98978189..98978198,-!p10@Foxp1!0.24!1.16!Foxp1;;chr6:144157924..144157955,-!p2@Sox5!0.24!1.16!Sox5;;chr17:48025139..48025166,-!p8@Foxp4!0.24!1.03!Foxp4;;chr17:37139519..37139531,+!p5@Zfp57!0.24!1.03!Zfp57;;chr15:37162834..37162849,+!p2@Grhl2!0.24!1.03!Grhl2;;chr11:69393894..69393921,+!p1@Trp53!0.23!142.29!Trp53;;chr8:72663586..72663633,+!p1@2310045N01Rik,p1@Mef2b!0.23!76.19!Mef2b;;chr9:110034519..110034606,+!p1@Smarcc1!0.23!66.62!Smarcc1;;chr12:114336410..114336478,+!p1@Mta1!0.23!48.90!Mta1;;chr17:57074836..57074927,-!p1@Mllt1!0.23!41.78!Mllt1;;chr5:138558139..138558214,+!p1@Zscan21!0.23!41.65!Zscan21;;chr11:23978022..23978076,+!p1@Bcl11a!0.23!32.73!Bcl11a;;chr7:134388025..134388092,+!p1@Zfp771!0.23!31.43!Zfp771;;chr17:3557742..3557775,-!p1@Tfb1m!0.23!20.96!Tfb1m;;chr10:79862175..79862221,-!p1@Mbd3!0.23!20.83!Mbd3;;chr10:80813050..80813114,-!p2@Hmg20b!0.23!16.17!Hmg20b;;chr15:102076870..102076941,-!p1@Rarg!0.23!16.04!Rarg;;chr5:138596922..138596968,-!p1@Zfp113!0.23!14.62!Zfp113;;chr1:170362242..170362256,-!p3@Pbx1!0.23!10.35!Pbx1;;chr18:80909801..80909819,-!p1@Nfatc1!0.23!8.41!Nfatc1;;chr14:55711198..55711258,-!p1@Zfhx2!0.23!8.15!Zfhx2;;chr7:26067619..26067702,+!p2@Cic!0.23!8.02!Cic;;chr17:48061409..48061431,-!p4@Foxp4!0.23!7.37!Foxp4;;chr5:147760305..147760324,+!p2@Gtf3a!0.23!6.73!Gtf3a;;chr8:87225670..87225697,+!p2@Lyl1!0.23!3.75!Lyl1;;chr4:126703093..126703158,+!p3@Sfpq!0.23!3.62!Sfpq;;chr4:128483731..128483757,-!p4@Zfp362!0.23!2.72!Zfp362;;chr7:144506077..144506128,-!p1@Ebf3!0.23!2.72!Ebf3;;chr10:75384291..75384298,-!p2@Smarcb1!0.23!2.59!Smarcb1;;chr17:3557785..3557797,-!p3@Tfb1m!0.23!2.20!Tfb1m;;chr2:35960919..35960954,-!p1@Lhx6!0.23!2.07!Lhx6;;chr2:91864449..91864492,-!p3@Creb3l1!0.23!1.68!Creb3l1;;chr16:4594853..4594884,+!p3@Glis2!0.23!1.68!Glis2;;chr17:37139455..37139469,+!p3@Zfp57!0.23!1.55!Zfp57;;chr12:109242296..109242307,-!p3@Bcl11b!0.23!1.42!Bcl11b;;chr11:98605517..98605539,+!p5@Thra!0.23!1.42!Thra;;chr7:4947786..4947797,-!p9@Zfp579!0.23!0.91!Zfp579;;chr2:181406327..181406350,-!p1@Sox18!0.22!46.70!Sox18;;chr9:20757246..20757278,-!p1@Dnmt1!0.22!43.46!Dnmt1;;chr15:81575487..81575561,+!p1@Zc3h7b!0.22!31.69!Zc3h7b;;chr3:96001503..96001557,-!p1@Bola1!0.22!31.30!Bola1;;chr7:13595144..13595205,-!p1@Zbtb45!0.22!28.59!Zbtb45;;chr7:13551180..13551243,+!p1@Zfp324!0.22!11.51!Zfp324;;chr5:24107779..24107825,-!p1@Smarcd3!0.22!9.31!Smarcd3;;chr8:72498266..72498306,-!p3@Gatad2a!0.22!9.31!Gatad2a;;chr14:65977498..65977528,+!p1@Zfp395!0.22!9.31!Zfp395;;chr18:83084030..83084056,+!p1@Zfp516!0.22!6.99!Zfp516;;chr7:148513409..148513455,-!p2@Deaf1!0.22!6.34!Deaf1;;chr4:135842030..135842065,+!p3@Zfp46!0.22!3.23!Zfp46;;chr10:30562571..30562597,-!p1@Hey2!0.22!2.72!Hey2;;chr15:98126545..98126588,-!p1@Zfp641!0.22!2.46!Zfp641;;chr11:101645830..101645881,-!p2@Etv4!0.22!1.94!Etv4;;chr11:70043257..70043263,-!p1@Bcl6b!0.22!1.81!Bcl6b;;chr18:76219118..76219155,+!p1@Zbtb7c!0.22!1.81!Zbtb7c;;chr2:127347067..127347093,-!p1@Kcnip3!0.22!1.68!Kcnip3;;chr18:76219161..76219176,+!p4@Zbtb7c!0.22!1.16!Zbtb7c;;chr18:14131020..14131033,-!p4@Zfp521!0.22!1.16!Zfp521;;chr10:127095407..127095440,+!p3@Stat6!0.22!1.03!Stat6;;chr7:25292246..25292259,+!p6@Zfp428!0.22!1.03!Zfp428;;chr4:133309775..133309784,-!p15@Arid1a!0.22!1.03!Arid1a;;chr13:78339134..78339185,-!p5@Nr2f1!0.22!1.03!Nr2f1;;chr12:12947199..12947213,-!p2@Mycn!0.22!0.65!Mycn;;chr15:76353005..76353021,-!p2@Scrt1!0.22!0.65!Scrt1;;chr15:76352740..76352781,-!p5@Scrt1!0.22!0.65!Scrt1;;chr12:39510042..39510069,+!p8@Etv1!0.22!0.65!Etv1;;chr12:57637700..57637717,-!p9@Nkx2-1!0.22!0.65!Nkx2-1;;chr12:56700411..56700416,+!p@chr12:56700411..56700416,+!0.22!0.65!Insm2;;chr12:57637649..57637665,-!p8@Nkx2-1!0.22!0.65!Nkx2-1;;chr14:122864676..122864708,-!p1@Zic5!0.22!0.65!Zic5;;chr9:74709695..74709722,+!p1@Onecut1!0.22!0.65!Onecut1;;chr9:63869510..63869530,-!p10@Smad6!0.22!0.65!Smad6;;chr9:62996985..62996990,-!p1@Skor1!0.22!0.65!Skor1;;chr8:12395287..12395295,+!p9@Sox1!0.22!0.65!Sox1;;chr9:118387969..118387984,+!p2@Eomes!0.22!0.65!Eomes;;chr7:30089006..30089022,+!p3@Dpf1!0.22!0.65!Dpf1;;chr9:87626109..87626120,-!p3@Tbx18!0.22!0.65!Tbx18;;chr16:65521021..65521032,+!p@chr16:65521021..65521032,+!0.22!0.65!Pou1f1;;chr1:167090920..167090924,-!p3@Tbx19!0.22!0.65!Tbx19;;chr2:105515826..105515837,+!p7@Pax6!0.22!0.65!Pax6;;chr1:169528720..169528749,+!p6@Rxrg!0.22!0.65!Rxrg;;chr1:169528457..169528482,+!p3@Rxrg!0.22!0.65!Rxrg;;chr19:59533429..59533470,+!p4@Emx2!0.22!0.65!Emx2;;chr11:59319796..59319801,-!p6@Zkscan17!0.22!0.65!Zkscan17;;chr10:42303385..42303401,-!p1@Nr2e1!0.22!0.65!Nr2e1;;chr11:23978291..23978323,+!p7@Bcl11a!0.22!0.65!Bcl11a;;chr11:98190918..98190951,-!p1@Neurod2!0.22!0.65!Neurod2;;chr10:62562530..62562540,+!p1@Atoh7!0.22!0.65!Atoh7;;chr4:21612929..21612952,-!p1@Prdm13!0.22!0.65!Prdm13;;chr2:71367979..71367993,+!p7@Dlx1!0.22!0.65!Dlx1;;chr4:97248607..97248649,+!p15@Nfia!0.22!0.65!Nfia;;chr3:130813756..130813767,+!p8@Lef1!0.22!0.65!Lef1;;chr4:22415443..22415506,-!p1@Pou3f2!0.22!0.65!Pou3f2;;chr7:147234982..147234988,-!p1@Msx3!0.22!0.65!Msx3;;chr6:15135215..15135244,+!p11@Foxp2!0.22!0.65!Foxp2;;chr7:135019127..135019137,-!p6@Zfp668!0.22!0.65!Zfp668;;chr5:98609885..98609900,+!p1@Prdm8!0.22!0.65!Prdm8;;chr10:116661536..116661555,-!p1@Yeats4!0.21!83.57!Yeats4;;chr5:147760216..147760292,+!p1@Gtf3a!0.21!65.33!Gtf3a;;chr18:14131126..14131211,-!p1@Zfp521!0.21!30.79!Zfp521;;chr7:4966247..4966286,-!p1@Fiz1!0.21!27.81!Fiz1;;chr6:117791192..117791269,+!p1@Zfp637!0.21!23.16!Zfp637;;chr10:22451142..22451191,-!p2@Tbpl1!0.21!13.97!Tbpl1;;chr7:13483149..13483234,+!p1@Zscan22!0.21!13.58!Zscan22;;chr5:134790355..134790369,-!p4@Gtf2i!0.21!6.34!Gtf2i;;chr10:92773818..92773906,-!p2@Elk3!0.21!6.21!Elk3;;chr7:134170038..134170055,-!p8@Maz!0.21!5.56!Maz;;chr7:134592623..134592680,-!p1@Zfp689!0.21!5.04!Zfp689;;chr7:4947697..4947718,-!p2@Zfp579!0.21!3.62!Zfp579;;chr12:110031207..110031224,+!p5@Yy1!0.21!3.49!Yy1;;chr7:16986617..16986632,+!p2@Zc3h4!0.21!3.36!Zc3h4;;chr19:5912834..5912852,-!p2@Dpf2!0.21!2.98!Dpf2;;chr7:50817629..50817652,+!p1@LOC100505180,p1@Zfp658!0.21!2.85!Zfp658;;chr8:111227738..111227793,+!p@chr8:111227738..111227793,+!0.21!2.85!Zfhx3;;chr7:148008023..148008092,-!p1@Zfp941!0.21!2.72!Zfp941;;chr7:56137011..56137041,-!p2@E2f8!0.21!2.07!E2f8;;chr11:102179350..102179375,-!p7@Ubtf!0.21!2.07!Ubtf;;chr2:153067138..153067147,-!p3@Plagl2!0.21!1.55!Plagl2;;chr14:65568567..65568588,-!p3@Hmbox1!0.21!1.42!Hmbox1;;chr5:122499831..122499891,-!p1@Cux2!0.21!1.42!Cux2;;chr7:77511622..77511657,-!p5@Nr2f2!0.21!1.03!Nr2f2;;chr7:38557752..38557793,-!p3@Zfp536!0.21!0.91!Zfp536;;chr1:120950149..120950160,-!p7@Gli2!0.21!0.78!Gli2;;chr10:128083021..128083044,-!p2@Ikzf4!0.21!0.78!Ikzf4;;chr8:26951227..26951266,-!p1@Ash2l!0.20!56.92!Ash2l;;chr8:73905806..73905876,-!p1@Nr2f6!0.20!29.75!Nr2f6;;chr16:22439681..22439698,-!p1@Etv5!0.20!24.71!Etv5;;chr6:47998498..47998527,-!p1@Zfp777!0.20!23.16!Zfp777;;chr15:76701830..76701883,-!p1@Zfp251!0.20!18.89!Zfp251;;chr4:116480137..116480178,-!p1@Toe1!0.20!14.88!Toe1;;chr5:145965392..145965443,+!p1@Zkscan5!0.20!12.29!Zkscan5;;chr10:75495343..75495405,+!p1@Zfp280b!0.20!11.38!Zfp280b;;chr9:122795920..122795977,+!p1@Zfp167!0.20!11.12!Zfp167;;chr14:98568971..98569025,-!p1@Dach1!0.20!10.48!Dach1;;chr4:135841976..135842029,+!p2@Zfp46!0.20!10.09!Zfp46;;chr2:91077082..91077122,-!p1@Ddb2!0.20!8.28!Ddb2;;chr7:31741761..31741800,-!p2@LOC100504922,p2@Usf2!0.20!8.28!Usf2;;chr2:154439063..154439105,+!p1@Zfp341!0.20!8.15!Zfp341;;chr13:44826095..44826185,+!p4@Jarid2!0.20!6.34!Jarid2;;chr8:72663098..72663160,-!p2@LOC100048268,p2@Rfxank!0.20!6.34!Rfxank;;chr6:133986088..133986122,+!p4@Etv6!0.20!5.30!Etv6;;chr7:25372631..25372684,-!p1@Zfp575!0.20!3.62!Zfp575;;chr9:63869850..63869873,-!p2@Smad6!0.20!3.49!Smad6;;chr6:48552000..48552042,+!p@chr6:48552000..48552042,+!0.20!3.49!Zfp775;;chr19:53384965..53384984,+!p4@Mxi1!0.20!3.36!Mxi1;;chr1:186556323..186556370,-!p2@Hlx!0.20!3.10!Hlx;;chr11:95170871..95170900,-!p2@Myst2!0.20!2.98!Myst2;;chr4:62626682..62626705,+!p2@Zfp618!0.20!2.46!Zfp618;;chr4:118846454..118846506,-!p2@Zfp691!0.20!2.46!Zfp691;;chr7:4947724..4947743,-!p3@Zfp579!0.20!2.46!Zfp579;;chr1:120949925..120949947,-!p4@Gli2!0.20!1.94!Gli2;;chr1:120879128..120879183,-!p3@Gli2!0.20!1.94!Gli2;;chr17:34729160..34729171,+!p3@Pbx2!0.20!1.94!Pbx2;;chr4:135840552..135840567,+!p4@Zfp46!0.20!1.42!Zfp46;;chr3:5218516..5218544,+!p2@Zfhx4!0.20!1.29!Zfhx4;;chr8:118231350..118231385,-!p7@Maf!0.20!1.29!Maf;;chr18:64499706..64499721,+!p2@Onecut2!0.20!1.16!Onecut2;;chr7:91558537..91558558,-!p4@Arnt2!0.20!0.91!Arnt2;;chr10:80809447..80809515,-!p5@Hmg20b!0.20!0.91!Hmg20b;;chr14:67853632..67853674,+!p3@Ebf2!0.20!0.91!Ebf2;;chr12:39506841..39506848,+!p7@Etv1!0.20!0.91!Etv1;;chrX:45245582..45245591,-!p4@Smarca1!0.20!0.91!Smarca1;;chr6:128312812..128312821,+!p5@Foxm1!0.20!0.78!Foxm1;;chr13:58503810..58503833,-!p2@Hnrnpk!0.19!74.25!Hnrnpk;;chr5:34530319..34530398,-!p1@Mxd4!0.19!67.78!Mxd4;;chr9:20757282..20757325,-!p2@Dnmt1!0.19!32.60!Dnmt1;;chr2:91864661..91864686,-!p1@Creb3l1!0.19!30.27!Creb3l1;;chr2:168780757..168780805,-!p1@LOC100502777,p1@Zfp64!0.19!19.66!Zfp64;;chr6:128312937..128313076,+!p1@Foxm1!0.19!19.02!Foxm1;;chr2:181327438..181327495,-!p1@Znf512b!0.19!18.11!Znf512b;;chr3:94641350..94641380,+!p1@Pogz!0.19!13.32!Pogz;;chr9:122832168..122832210,+!p1@Zfp105!0.19!10.09!Zfp105;;chr13:55431084..55431137,-!p1@Mxd3!0.19!10.09!Mxd3;;chr8:72520015..72520053,-!p2@Gatad2a!0.19!8.67!Gatad2a;;chr5:31754800..31754825,+!p2@Zfp512!0.19!6.34!Zfp512;;chr16:3847206..3847307,+!p1@Zfp174!0.19!5.95!Zfp174;;chr17:4994697..4994730,+!p4@Arid1b!0.19!5.82!Arid1b;;chr4:120624269..120624302,-!p1@Zfp69!0.19!4.27!Zfp69;;chr10:126725875..126725902,-!p3@Mbd6!0.19!4.27!Mbd6;;chr4:149862477..149862553,+!p3@Rere!0.19!4.14!Rere;;chr4:87678709..87678726,-!p4@Mllt3!0.19!3.62!Mllt3;;chr11:5761871..5761882,+!p3@Aebp1!0.19!2.85!Aebp1;;chr3:90097275..90097302,+!p2@Gatad2b!0.19!2.46!Gatad2b;;chr15:102087880..102087927,-!p2@Rarg!0.19!2.46!Rarg;;chr6:38204274..38204327,-!p3@D630045J12Rik!0.19!1.94!D630045J12Rik;;chr4:6917971..6918000,-!p3@Tox!0.19!1.94!Tox;;chr11:85646341..85646352,+!p3@Tbx2!0.19!1.94!Tbx2;;chr3:5218590..5218614,+!p3@Zfhx4!0.19!1.55!Zfhx4;;chr6:128312772..128312792,+!p2@Foxm1!0.19!1.55!Foxm1;;chr6:83391584..83391595,-!p2@Tet3!0.19!1.55!Tet3;;chr15:100382267..100382287,-!p3@Tfcp2!0.19!1.42!Tfcp2;;chr10:127176667..127176679,+!p2@Zbtb39!0.19!1.29!Zbtb39;;chr12:37835120..37835133,+!p2@Meox2!0.19!1.16!Meox2;;chr4:63071739..63071760,-!p5@Akna!0.19!1.16!Akna;;chr19:9018049..9018054,+!p5@Mta2!0.19!1.03!Mta2;;chr7:25292223..25292234,+!p7@Zfp428!0.19!0.91!Zfp428;;chr14:99698164..99698208,+!p2@Klf5!0.19!0.78!Klf5;;chr5:125343044..125343141,+!p1@Zfp664!0.18!59.12!Zfp664;;chr1:182499044..182499091,+!p1@Parp1!0.18!44.50!Parp1;;chr5:111082367..111082441,-!p1@Noc4l!0.18!31.69!Noc4l;;chr10:80813134..80813211,-!p1@Hmg20b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| |||
|ffid_belonging_in_development=UBERON:0002532,UBERON:0006601,UBERON:0010316,FF:0000294 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
Line 66: | Line 40: | ||
|fonse_treatment= | |fonse_treatment= | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |||
|id=FF:370-44C7 | |||
|is_a=EFO:0002091;;FF:0011325 | |||
|is_obsolete= | |||
|library_id=CNhs11009 | |||
|library_id_phase_based=2:CNhs11009 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/mouse#cage;sample;370 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/mouse#cage;sample;370 | |||
|mm10bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.tissue.hCAGE/pituitary%2520gland%252c%2520embryo%2520E13.CNhs11009.370-44C7.mm10.nobarcode.bam | |||
|mm10ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.tissue.hCAGE/pituitary%2520gland%252c%2520embryo%2520E13.CNhs11009.370-44C7.mm10.nobarcode.ctss.bed.gz | |||
|mm9bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/pituitary%2520gland%252c%2520embryo%2520E13.CNhs11009.370-44C7.mm9.nobarcode.bam | |||
|mm9ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/pituitary%2520gland%252c%2520embryo%2520E13.CNhs11009.370-44C7.mm9.ctss.bed.gz | |||
|mm9fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/pituitary%2520gland%252c%2520embryo%2520E13.CNhs11009.370-44C7.mm9.nobarcode.rdna.fa.gz | |||
|name=pituitary gland, embryo E13 | |||
|namespace=FANTOM5 | |||
|part_of= | |||
|profile_cagescan=,,, | |||
|profile_hcage=CNhs11009,LSID730,release008,COMPLETED | |||
|profile_rnaseq= | |||
|profile_srnaseq=,,, | |||
|repeat_enrich_byfamily=0.0964064946357865,0,0,0,0,0,-0.220717052035795,0,0,0,0,-0.0315073448417742,0,0,0,0,0,0,0.215039085173593,0,0,0,0,0,0,0,0,0,0,0,0,0.0093296895145921,-0.308942638013624,0,0,0,0,0,-0.0346185360612493,0.0838510141337896,-0.0503622102276218,0.69781235139661,0.252374222427063,0,0,0,0,0,0,0,0,0,0,0.0528318955547673,0,0.033922676995306,0,0,0,0,0.0570812694758716,0,0,0,0,0,-0.102514196138434,0.138213521238851,-0.158091042771083,-0.00595217411171993,0,0,0,0.0654812342161275,0.0528318955547673,0,0.0170584691429434,-0.0266216789805231,0.166483911743562,-0.0788315948399074,0,0,0,0,0,0,0.0999282245587464,0.519362697212777,0.124656682577935,0,0,0,0,0 | |||
|rna_box=44 | |||
|rna_catalog_number= | |||
|rna_concentration= | |||
|rna_extraction_protocol= | |||
|rna_lot_number= | |||
|rna_od260/230= | |||
|rna_od260/280= | |||
|rna_position=C7 | |||
|rna_rin= | |||
|rna_sample_type= | |||
|rna_tube_id=44C7 | |||
|rna_weight_ug= | |||
|sample_age= | |||
|sample_category=developmental | |||
|sample_cell_catalog= | |||
|sample_cell_line= | |||
|sample_cell_lot= | |||
|sample_cell_type=CELL MIXTURE - tissue sample | |||
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest) | |||
|sample_company= | |||
|sample_description= | |||
|sample_dev_stage=13 days embryo | |||
|sample_disease= | |||
|sample_donor(cell lot)= | |||
|sample_ethnicity= | |||
|sample_experimental_condition= | |||
|sample_id=370 | |||
|sample_note= | |||
|sample_sex=mixture | |||
|sample_species=Mouse (Mus musculus) | |||
|sample_strain=C57BL/6J | |||
|sample_tissue=pituitary gland | |||
|top_motifs=SOX{8,9,10}:1.80945751505;RXR{A,B,G}:1.65338200186;ZNF384:1.45559595684;VSX1,2:1.4389675879;ZIC1..3:1.37532525719;SOX2:1.34187808153;NFY{A,B,C}:1.31011702429;LHX3,4:1.23685459173;ZNF423:1.23616748264;CDC5L:1.19119107655;PATZ1:1.15063543164;RREB1:1.13843959145;PAX1,9:1.10699720578;PAX6:1.07490759602;NANOG{mouse}:1.02891225327;EP300:1.00948687366;KLF4:0.984640967018;NANOG:0.936784319571;HMX1:0.923702845503;MZF1:0.888159229642;ZNF143:0.876499501577;RFX1:0.874519653283;TOPORS:0.848703822853;LEF1_TCF7_TCF7L1,2:0.844240911328;SPZ1:0.797903792994;MYBL2:0.780337449676;MAZ:0.749486754183;HSF1,2:0.735773240625;NKX3-1:0.692800945138;SOX5:0.671943058787;TFDP1:0.664966089983;NRF1:0.63143400734;GTF2A1,2:0.607501833358;FOXM1:0.605233753062;TFAP2{A,C}:0.597889136224;MED-1{core}:0.597723156752;HES1:0.588012673655;ONECUT1,2:0.573977258566;POU2F1..3:0.567082139446;GATA4:0.538384020401;BREu{core}:0.534966681747;IKZF2:0.533859014218;IKZF1:0.53279787776;OCT4_SOX2{dimer}:0.529663411336;GZF1:0.527655989984;GFI1:0.52590884711;ELK1,4_GABP{A,B1}:0.524635589605;GTF2I:0.517909142895;ALX1:0.492640489473;LMO2:0.487026283819;HIF1A:0.46388862622;RFX2..5_RFXANK_RFXAP:0.447298714587;GLI1..3:0.44199059736;AHR_ARNT_ARNT2:0.420982279229;HIC1:0.414899289984;PRRX1,2:0.414166738633;YY1:0.41309701925;TBX4,5:0.396074096124;HOX{A5,B5}:0.390459803694;ADNP_IRX_SIX_ZHX:0.386145849167;SNAI1..3:0.375555985004;FOXD3:0.371270946843;TFAP4:0.368963659697;EN1,2:0.358000775937;EBF1:0.353321456003;ESR1:0.338154563609;XCPE1{core}:0.330620013255;HAND1,2:0.327598002763;ATF2:0.294834258828;REST:0.29260170367;SOX17:0.288911414835;SP1:0.280301703738;FOXL1:0.277496720525;UFEwm:0.261875969181;ZNF238:0.243761346141;E2F1..5:0.2414723628;PAX5:0.225358173341;RXRA_VDR{dimer}:0.219656384063;GCM1,2:0.216945721136;ZBTB6:0.187785330246;ZFP161:0.176948300825;DBP:0.17613281335;CUX2:0.146649221338;POU5F1:0.140687557623;MYOD1:0.116274518505;HOXA9_MEIS1:0.113043049003;TFAP2B:0.103715451618;CRX:0.0906439196477;NKX2-1,4:0.0886043969807;PITX1..3:0.0665814265547;EGR1..3:0.052515143855;NKX2-3_NKX2-5:0.0513631677865;MYB:0.0380323510824;SPIB:0.0374097745547;HMGA1,2:0.0315971818658;PAX4:0.0222725551629;PRDM1:0.0198358416829;JUN:-0.0010402815746;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.00523951803196;ZEB1:-0.00892279400253;TLX1..3_NFIC{dimer}:-0.0134712449649;FOXP3:-0.0158811445542;TEAD1:-0.0446246780096;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.053484841693;MTE{core}:-0.0577819557146;PAX8:-0.0628519842963;MTF1:-0.0698893488197;RORA:-0.0775302727588;STAT1,3:-0.0949287161768;ELF1,2,4:-0.113504554888;EVI1:-0.128337193765;T:-0.133047554868;TFCP2:-0.141476853323;NFE2L1:-0.176779548603;TBP:-0.19008616135;NKX3-2:-0.22386328373;SMAD1..7,9:-0.224241346274;FOXP1:-0.231131923338;HBP1_HMGB_SSRP1_UBTF:-0.237237117775;POU6F1:-0.258058750418;RUNX1..3:-0.271424386848;ALX4:-0.288954881619;RBPJ:-0.335848737357;ATF6:-0.336702301478;SPI1:-0.352988907663;bHLH_family:-0.360840699376;NR1H4:-0.36093480412;ETS1,2:-0.363563696018;GATA6:-0.37331710906;TLX2:-0.377636454465;HLF:-0.380004905082;TAL1_TCF{3,4,12}:-0.381650142484;TP53:-0.383480545299;GFI1B:-0.399969685353;NHLH1,2:-0.400041386937;ZNF148:-0.418982542806;PBX1:-0.425049981071;FOXO1,3,4:-0.434611417847;DMAP1_NCOR{1,2}_SMARC:-0.456641562086;CDX1,2,4:-0.477029453702;NR5A1,2:-0.478075663172;MYFfamily:-0.496588667035;HNF4A_NR2F1,2:-0.503619445741;NFIL3:-0.511047869519;PPARG:-0.511318307267;FOXQ1:-0.513834749883;NFKB1_REL_RELA:-0.51533378715;FOSL2:-0.522254407266;SRF:-0.52624493196;BPTF:-0.537621628224;NKX6-1,2:-0.561191429616;POU3F1..4:-0.593981587802;MEF2{A,B,C,D}:-0.594894761783;HNF1A:-0.596480415673;AR:-0.597260720758;STAT5{A,B}:-0.601645538828;POU1F1:-0.601917948624;ZBTB16:-0.604810027967;CREB1:-0.611193946637;NFIX:-0.643009561413;FOXN1:-0.66186821648;ATF4:-0.666419725465;BACH2:-0.668299789097;FOX{I1,J2}:-0.682309264532;FOX{F1,F2,J1}:-0.695015662566;TGIF1:-0.698534878022;FOX{D1,D2}:-0.735034606008;HOX{A4,D4}:-0.742839053498;ARID5B:-0.765080933771;ESRRA:-0.776874838779;PDX1:-0.784742178368;ATF5_CREB3:-0.788447230584;NFE2L2:-0.828301817887;FOS_FOS{B,L1}_JUN{B,D}:-0.882673049428;FOXA2:-0.885268047876;IRF1,2:-0.891425452066;NR6A1:-0.905939909316;MAFB:-0.910010322573;IRF7:-0.97215116934;NKX2-2,8:-0.990885053035;PAX2:-1.00539216052;SREBF1,2:-1.00878381501;NR3C1:-1.01498543973;TEF:-1.0342745826;AIRE:-1.13136591804;NFATC1..3:-1.15441059913;NFE2:-1.2273074685;STAT2,4,6:-1.23098016006;CEBPA,B_DDIT3:-1.42740911405 | |top_motifs=SOX{8,9,10}:1.80945751505;RXR{A,B,G}:1.65338200186;ZNF384:1.45559595684;VSX1,2:1.4389675879;ZIC1..3:1.37532525719;SOX2:1.34187808153;NFY{A,B,C}:1.31011702429;LHX3,4:1.23685459173;ZNF423:1.23616748264;CDC5L:1.19119107655;PATZ1:1.15063543164;RREB1:1.13843959145;PAX1,9:1.10699720578;PAX6:1.07490759602;NANOG{mouse}:1.02891225327;EP300:1.00948687366;KLF4:0.984640967018;NANOG:0.936784319571;HMX1:0.923702845503;MZF1:0.888159229642;ZNF143:0.876499501577;RFX1:0.874519653283;TOPORS:0.848703822853;LEF1_TCF7_TCF7L1,2:0.844240911328;SPZ1:0.797903792994;MYBL2:0.780337449676;MAZ:0.749486754183;HSF1,2:0.735773240625;NKX3-1:0.692800945138;SOX5:0.671943058787;TFDP1:0.664966089983;NRF1:0.63143400734;GTF2A1,2:0.607501833358;FOXM1:0.605233753062;TFAP2{A,C}:0.597889136224;MED-1{core}:0.597723156752;HES1:0.588012673655;ONECUT1,2:0.573977258566;POU2F1..3:0.567082139446;GATA4:0.538384020401;BREu{core}:0.534966681747;IKZF2:0.533859014218;IKZF1:0.53279787776;OCT4_SOX2{dimer}:0.529663411336;GZF1:0.527655989984;GFI1:0.52590884711;ELK1,4_GABP{A,B1}:0.524635589605;GTF2I:0.517909142895;ALX1:0.492640489473;LMO2:0.487026283819;HIF1A:0.46388862622;RFX2..5_RFXANK_RFXAP:0.447298714587;GLI1..3:0.44199059736;AHR_ARNT_ARNT2:0.420982279229;HIC1:0.414899289984;PRRX1,2:0.414166738633;YY1:0.41309701925;TBX4,5:0.396074096124;HOX{A5,B5}:0.390459803694;ADNP_IRX_SIX_ZHX:0.386145849167;SNAI1..3:0.375555985004;FOXD3:0.371270946843;TFAP4:0.368963659697;EN1,2:0.358000775937;EBF1:0.353321456003;ESR1:0.338154563609;XCPE1{core}:0.330620013255;HAND1,2:0.327598002763;ATF2:0.294834258828;REST:0.29260170367;SOX17:0.288911414835;SP1:0.280301703738;FOXL1:0.277496720525;UFEwm:0.261875969181;ZNF238:0.243761346141;E2F1..5:0.2414723628;PAX5:0.225358173341;RXRA_VDR{dimer}:0.219656384063;GCM1,2:0.216945721136;ZBTB6:0.187785330246;ZFP161:0.176948300825;DBP:0.17613281335;CUX2:0.146649221338;POU5F1:0.140687557623;MYOD1:0.116274518505;HOXA9_MEIS1:0.113043049003;TFAP2B:0.103715451618;CRX:0.0906439196477;NKX2-1,4:0.0886043969807;PITX1..3:0.0665814265547;EGR1..3:0.052515143855;NKX2-3_NKX2-5:0.0513631677865;MYB:0.0380323510824;SPIB:0.0374097745547;HMGA1,2:0.0315971818658;PAX4:0.0222725551629;PRDM1:0.0198358416829;JUN:-0.0010402815746;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.00523951803196;ZEB1:-0.00892279400253;TLX1..3_NFIC{dimer}:-0.0134712449649;FOXP3:-0.0158811445542;TEAD1:-0.0446246780096;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.053484841693;MTE{core}:-0.0577819557146;PAX8:-0.0628519842963;MTF1:-0.0698893488197;RORA:-0.0775302727588;STAT1,3:-0.0949287161768;ELF1,2,4:-0.113504554888;EVI1:-0.128337193765;T:-0.133047554868;TFCP2:-0.141476853323;NFE2L1:-0.176779548603;TBP:-0.19008616135;NKX3-2:-0.22386328373;SMAD1..7,9:-0.224241346274;FOXP1:-0.231131923338;HBP1_HMGB_SSRP1_UBTF:-0.237237117775;POU6F1:-0.258058750418;RUNX1..3:-0.271424386848;ALX4:-0.288954881619;RBPJ:-0.335848737357;ATF6:-0.336702301478;SPI1:-0.352988907663;bHLH_family:-0.360840699376;NR1H4:-0.36093480412;ETS1,2:-0.363563696018;GATA6:-0.37331710906;TLX2:-0.377636454465;HLF:-0.380004905082;TAL1_TCF{3,4,12}:-0.381650142484;TP53:-0.383480545299;GFI1B:-0.399969685353;NHLH1,2:-0.400041386937;ZNF148:-0.418982542806;PBX1:-0.425049981071;FOXO1,3,4:-0.434611417847;DMAP1_NCOR{1,2}_SMARC:-0.456641562086;CDX1,2,4:-0.477029453702;NR5A1,2:-0.478075663172;MYFfamily:-0.496588667035;HNF4A_NR2F1,2:-0.503619445741;NFIL3:-0.511047869519;PPARG:-0.511318307267;FOXQ1:-0.513834749883;NFKB1_REL_RELA:-0.51533378715;FOSL2:-0.522254407266;SRF:-0.52624493196;BPTF:-0.537621628224;NKX6-1,2:-0.561191429616;POU3F1..4:-0.593981587802;MEF2{A,B,C,D}:-0.594894761783;HNF1A:-0.596480415673;AR:-0.597260720758;STAT5{A,B}:-0.601645538828;POU1F1:-0.601917948624;ZBTB16:-0.604810027967;CREB1:-0.611193946637;NFIX:-0.643009561413;FOXN1:-0.66186821648;ATF4:-0.666419725465;BACH2:-0.668299789097;FOX{I1,J2}:-0.682309264532;FOX{F1,F2,J1}:-0.695015662566;TGIF1:-0.698534878022;FOX{D1,D2}:-0.735034606008;HOX{A4,D4}:-0.742839053498;ARID5B:-0.765080933771;ESRRA:-0.776874838779;PDX1:-0.784742178368;ATF5_CREB3:-0.788447230584;NFE2L2:-0.828301817887;FOS_FOS{B,L1}_JUN{B,D}:-0.882673049428;FOXA2:-0.885268047876;IRF1,2:-0.891425452066;NR6A1:-0.905939909316;MAFB:-0.910010322573;IRF7:-0.97215116934;NKX2-2,8:-0.990885053035;PAX2:-1.00539216052;SREBF1,2:-1.00878381501;NR3C1:-1.01498543973;TEF:-1.0342745826;AIRE:-1.13136591804;NFATC1..3:-1.15441059913;NFE2:-1.2273074685;STAT2,4,6:-1.23098016006;CEBPA,B_DDIT3:-1.42740911405 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_mouse;search_select_hide=table111:370-44C7;search_select_hide=table117:370-44C7 | |||
}} | }} |
Latest revision as of 19:13, 4 June 2020
Name: | pituitary gland, embryo E13 |
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Species: | Mouse (Mus musculus) |
Library ID: | CNhs11009 |
Sample type: | developmental |
Genomic View: | UCSC |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
CNhs11009
0 | 0 |
1 | 0.0356 |
10 | 0 |
100 | 0.0999 |
1000 | 0 |
1001 | -0.0395 |
1002 | 0.251 |
1003 | -0.0731 |
1004 | 0.377 |
1005 | 0 |
1006 | -2.404932e-4 |
1007 | 0.141 |
1008 | 0 |
1009 | -0.0786 |
101 | -0.0813 |
1010 | 0 |
1011 | -0.0178 |
1012 | 0 |
1013 | -0.138 |
1014 | 0.383 |
1015 | 0.358 |
1016 | 0.247 |
1017 | 0 |
1018 | 0 |
1019 | 0 |
102 | 0 |
1020 | 0 |
1021 | 0.0528 |
1022 | -0.0704 |
1023 | 0 |
1024 | 0.0101 |
1025 | 0 |
1026 | 0 |
1027 | 0 |
1028 | 0 |
1029 | -0.148 |
103 | 0.0683 |
1030 | 0 |
1031 | 0.374 |
1032 | -0.177 |
1033 | 0.0859 |
1034 | 0 |
1035 | 0 |
1036 | 0.152 |
1037 | 0 |
1038 | -0.0488 |
1039 | -0.0702 |
104 | 0 |
1040 | 0.0134 |
1041 | 0 |
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11009
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11009
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.0316 |
10 | 10 | 0.204 |
100 | 100 | 0.66 |
101 | 101 | 0.675 |
102 | 102 | 0.744 |
103 | 103 | 0.126 |
104 | 104 | 0.902 |
105 | 105 | 0.18 |
106 | 106 | 0.0118 |
107 | 107 | 0.0252 |
108 | 108 | 0.995 |
109 | 109 | 0.66 |
11 | 11 | 0.299 |
110 | 110 | 0.295 |
111 | 111 | 0.0445 |
112 | 112 | 0.0849 |
113 | 113 | 0.401 |
114 | 114 | 0.168 |
115 | 115 | 0.838 |
116 | 116 | 0.894 |
117 | 117 | 0.536 |
118 | 118 | 0.979 |
119 | 119 | 0.28 |
12 | 12 | 0.98 |
120 | 120 | 0.931 |
121 | 121 | 0.887 |
122 | 122 | 0.491 |
123 | 123 | 0.151 |
124 | 124 | 0.867 |
125 | 125 | 0.343 |
126 | 126 | 0.877 |
127 | 127 | 0.133 |
128 | 128 | 0.0774 |
129 | 129 | 0.211 |
13 | 13 | 0.0925 |
130 | 130 | 0.399 |
131 | 131 | 0.338 |
132 | 132 | 0.576 |
133 | 133 | 0.651 |
134 | 134 | 0.435 |
135 | 135 | 0.168 |
136 | 136 | 0.327 |
137 | 137 | 0.51 |
138 | 138 | 0.706 |
139 | 139 | 0.013 |
14 | 14 | 0.362 |
140 | 140 | 0.0145 |
141 | 141 | 0.0542 |
142 | 142 | 0.00375 |
143 | 143 | 0.846 |
144 | 144 | 0.9 |
145 | 145 | 0.335 |
146 | 146 | 0.357 |
147 | 147 | 0.465 |
148 | 148 | 0.361 |
149 | 149 | 0.512 |
15 | 15 | 0.0909 |
150 | 150 | 0.525 |
151 | 151 | 0.0918 |
152 | 152 | 0.685 |
153 | 153 | 0.419 |
154 | 154 | 0.168 |
155 | 155 | 0.887 |
156 | 156 | 7.45976e-4 |
157 | 157 | 0.743 |
158 | 158 | 0.217 |
159 | 159 | 0.24 |
160 | 160 | 0.438 |
161 | 161 | 0.741 |
162 | 162 | 0.492 |
163 | 163 | 0.0981 |
164 | 164 | 0.0658 |
165 | 165 | 0.198 |
166 | 166 | 0.852 |
167 | 167 | 0.239 |
168 | 168 | 0.419 |
169 | 169 | 0.373 |
17 | 17 | 0.163 |
18 | 18 | 0.679 |
19 | 19 | 0.214 |
2 | 2 | 0.977 |
20 | 20 | 0.631 |
21 | 21 | 0.564 |
22 | 22 | 0.53 |
23 | 23 | 0.0989 |
24 | 24 | 0.923 |
25 | 25 | 0.142 |
26 | 26 | 0.378 |
27 | 27 | 0.781 |
28 | 28 | 0.362 |
29 | 29 | 0.398 |
3 | 3 | 0.423 |
30 | 30 | 0.907 |
31 | 31 | 0.615 |
32 | 32 | 0.258 |
33 | 33 | 0.637 |
34 | 34 | 0.678 |
35 | 35 | 0.484 |
36 | 36 | 0.561 |
37 | 37 | 0.0682 |
38 | 38 | 0.329 |
39 | 39 | 0.874 |
4 | 4 | 0.741 |
40 | 40 | 0.956 |
41 | 41 | 0.645 |
42 | 42 | 0.967 |
43 | 43 | 0.142 |
44 | 44 | 0.537 |
45 | 45 | 0.621 |
46 | 46 | 0.2 |
47 | 47 | 0.209 |
48 | 48 | 0.192 |
49 | 49 | 0.101 |
5 | 5 | 0.0446 |
50 | 50 | 0.665 |
51 | 51 | 0.463 |
52 | 52 | 0.325 |
53 | 53 | 0.701 |
54 | 54 | 0.352 |
55 | 55 | 0.936 |
56 | 56 | 0.776 |
57 | 57 | 0.272 |
58 | 58 | 0.233 |
59 | 59 | 0.379 |
6 | 6 | 0.784 |
60 | 60 | 0.0675 |
61 | 61 | 0.869 |
62 | 62 | 0.087 |
63 | 63 | 0.269 |
64 | 64 | 0.963 |
65 | 65 | 0.305 |
66 | 66 | 0.16 |
67 | 67 | 0.607 |
68 | 68 | 0.399 |
69 | 69 | 0.879 |
7 | 7 | 0.118 |
70 | 70 | 0.0089 |
71 | 71 | 0.239 |
72 | 72 | 0.735 |
73 | 73 | 0.584 |
74 | 74 | 0.274 |
75 | 75 | 0.69 |
76 | 76 | 0.746 |
77 | 77 | 0.449 |
78 | 78 | 0.0548 |
79 | 79 | 0.365 |
8 | 8 | 0.445 |
80 | 80 | 0.148 |
81 | 81 | 0.376 |
82 | 82 | 0.467 |
83 | 83 | 0.295 |
84 | 84 | 0.759 |
85 | 85 | 0.0721 |
86 | 86 | 0.557 |
87 | 87 | 0.226 |
88 | 88 | 0.484 |
89 | 89 | 0.301 |
9 | 9 | 0.376 |
90 | 90 | 0.178 |
91 | 91 | 0.457 |
92 | 92 | 0.0672 |
93 | 93 | 0.215 |
94 | 94 | 0.302 |
95 | 95 | 0.983 |
96 | 96 | 0.272 |
97 | 97 | 0.686 |
98 | 98 | 0.792 |
99 | 99 | 0.669 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11009
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0011325 mouse pituitary gland- embryo E13 sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0000955 (brain)
0000007 (pituitary gland)
0001894 (diencephalon)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0003296 (gland of diencephalon)
0010133 (neuroendocrine gland)
0010314 (structure with developmental contribution from neural crest)
0011216 (organ system subdivision)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000481 (multi-tissue structure)
0000073 (regional part of nervous system)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0002368 (endocrine gland)
0002616 (regional part of brain)
0002780 (regional part of forebrain)
0002530 (gland)
0010317 (germ layer / neural crest derived structure)
0001017 (central nervous system)
0001016 (nervous system)
0001890 (forebrain)
0000949 (endocrine system)
FF: FANTOM5
0000102 (sample by type)
0000101 (sample by species)
0000103 (mouse sample)
0000001 (sample)
0000999 (fetal tissue sample)
0000292 (embryonic day sample - mouse)
0000004 (tissue sample)
0000293 (mouse embryonic day 13 sample)
0011325 (mouse pituitary gland- embryo E13 sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0010316 (germ layer / neural crest)
FF:0000294 (mouse embryonic day 11 sample)