FFCP PHASE1:Mm9::chr19:19185671..19185693,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=225998 | |EntrezGene=225998 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=53 | |||
|TSSclassifier=NA | |||
|UniProt=Q8R1B8 | |UniProt=Q8R1B8 | ||
|association_with_transcript=0bp_to_ENSMUST00000112832,NM_001043354,uc008gye.1_5end | |association_with_transcript=0bp_to_ENSMUST00000112832,NM_001043354,uc008gye.1_5end | ||
|cluster_id=chr19:19185671..19185693,- | |||
|description=CAGE_peak_1_at_Rorb_5end | |description=CAGE_peak_1_at_Rorb_5end | ||
|id=chr19:19185671..19185693,- | |id=chr19:19185671..19185693,- | ||
|ontology_enrichment_celltype=CL:0000117!2.30e-10!23;CL:0000337!2.30e-10!23;CL:0000221!3.60e-10!44;CL:0000133!3.60e-10!44;CL:0002319!8.15e-10!43;CL:0000540!6.49e-09!33;CL:0000047!6.49e-09!33;CL:0000031!6.49e-09!33;CL:0000404!6.49e-09!33;CL:0000055!5.68e-07!50 | |ontology_enrichment_celltype=CL:0000117!2.30e-10!23;CL:0000337!2.30e-10!23;CL:0000221!3.60e-10!44;CL:0000133!3.60e-10!44;CL:0002319!8.15e-10!43;CL:0000540!6.49e-09!33;CL:0000047!6.49e-09!33;CL:0000031!6.49e-09!33;CL:0000404!6.49e-09!33;CL:0000055!5.68e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.63e-11,23;CL:0000337,4.63e-11,23;CL:0000221,5.17e-11,44;CL:0000133,5.17e-11,44;CL:0002319,1.25e-10,43;CL:0000540,1.69e-09,33;CL:0000047,1.69e-09,33;CL:0000031,1.69e-09,33;CL:0000404,1.69e-09,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.12e-30!102;UBERON:0000924!1.12e-30!102;UBERON:0006601!1.12e-30!102;UBERON:0002346!6.36e-29!71;UBERON:0003075!6.36e-29!71;UBERON:0007284!6.36e-29!71;UBERON:0000033!8.19e-29!63;UBERON:0000073!3.37e-27!75;UBERON:0001016!3.37e-27!75;UBERON:0001017!7.08e-27!73;UBERON:0005743!7.08e-27!73;UBERON:0003056!2.02e-26!49;UBERON:0001049!4.45e-24!52;UBERON:0005068!4.45e-24!52;UBERON:0006241!4.45e-24!52;UBERON:0007135!4.45e-24!52;UBERON:0000955!2.88e-23!50;UBERON:0006238!2.88e-23!50;UBERON:0002616!9.71e-23!49;UBERON:0003080!9.20e-20!40;UBERON:0002780!3.61e-19!39;UBERON:0001890!3.61e-19!39;UBERON:0006240!3.61e-19!39;UBERON:0002020!1.80e-16!34;UBERON:0002791!4.68e-14!29;UBERON:0003528!4.68e-14!29;UBERON:0001893!4.68e-14!29;UBERON:0007811!9.83e-12!86;UBERON:0000956!4.40e-11!21;UBERON:0001869!4.40e-11!21;UBERON:0000203!4.40e-11!21;UBERON:0000153!6.15e-11!94;UBERON:0002619!2.47e-09!17;UBERON:0002021!9.20e-08!10;UBERON:0000411!9.20e-08!10;UBERON:0001950!9.20e-08!10;UBERON:0000468!1.13e-07!333;UBERON:0004111!1.18e-07!122;UBERON:0000970!1.68e-07!9;UBERON:0000019!1.68e-07!9;UBERON:0000047!1.68e-07!9;UBERON:0004088!1.68e-07!9;UBERON:0002104!1.68e-07!9;UBERON:0001456!1.68e-07!9;UBERON:0003072!1.68e-07!9;UBERON:0003071!1.68e-07!9;UBERON:0004128!1.68e-07!9;UBERON:0000025!4.86e-07!114;UBERON:0000020!5.28e-07!12;UBERON:0001032!5.28e-07!12;UBERON:0004456!5.28e-07!12 | |ontology_enrichment_uberon=UBERON:0004121!1.12e-30!102;UBERON:0000924!1.12e-30!102;UBERON:0006601!1.12e-30!102;UBERON:0002346!6.36e-29!71;UBERON:0003075!6.36e-29!71;UBERON:0007284!6.36e-29!71;UBERON:0000033!8.19e-29!63;UBERON:0000073!3.37e-27!75;UBERON:0001016!3.37e-27!75;UBERON:0001017!7.08e-27!73;UBERON:0005743!7.08e-27!73;UBERON:0003056!2.02e-26!49;UBERON:0001049!4.45e-24!52;UBERON:0005068!4.45e-24!52;UBERON:0006241!4.45e-24!52;UBERON:0007135!4.45e-24!52;UBERON:0000955!2.88e-23!50;UBERON:0006238!2.88e-23!50;UBERON:0002616!9.71e-23!49;UBERON:0003080!9.20e-20!40;UBERON:0002780!3.61e-19!39;UBERON:0001890!3.61e-19!39;UBERON:0006240!3.61e-19!39;UBERON:0002020!1.80e-16!34;UBERON:0002791!4.68e-14!29;UBERON:0003528!4.68e-14!29;UBERON:0001893!4.68e-14!29;UBERON:0007811!9.83e-12!86;UBERON:0000956!4.40e-11!21;UBERON:0001869!4.40e-11!21;UBERON:0000203!4.40e-11!21;UBERON:0000153!6.15e-11!94;UBERON:0002619!2.47e-09!17;UBERON:0002021!9.20e-08!10;UBERON:0000411!9.20e-08!10;UBERON:0001950!9.20e-08!10;UBERON:0000468!1.13e-07!333;UBERON:0004111!1.18e-07!122;UBERON:0000970!1.68e-07!9;UBERON:0000019!1.68e-07!9;UBERON:0000047!1.68e-07!9;UBERON:0004088!1.68e-07!9;UBERON:0002104!1.68e-07!9;UBERON:0001456!1.68e-07!9;UBERON:0003072!1.68e-07!9;UBERON:0003071!1.68e-07!9;UBERON:0004128!1.68e-07!9;UBERON:0000025!4.86e-07!114;UBERON:0000020!5.28e-07!12;UBERON:0001032!5.28e-07!12;UBERON:0004456!5.28e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.24e-33,95;UBERON:0000924,3.24e-33,95;UBERON:0006601,3.24e-33,95;UBERON:0002346,1.29e-32,64;UBERON:0003075,1.29e-32,64;UBERON:0007284,1.29e-32,64;UBERON:0010371,2.91e-30,73;UBERON:0001016,1.85e-29,75;UBERON:0001017,4.11e-29,73;UBERON:0003056,2.13e-28,49;UBERON:0000073,1.50e-27,54;UBERON:0001049,4.14e-26,52;UBERON:0005068,4.14e-26,52;UBERON:0006241,4.14e-26,52;UBERON:0007135,4.14e-26,52;UBERON:0010314,6.66e-24,92;UBERON:0000955,3.16e-23,47;UBERON:0006238,3.16e-23,47;UBERON:0002616,1.15e-22,46;UBERON:0003080,3.31e-21,40;UBERON:0002780,1.45e-20,39;UBERON:0001890,1.45e-20,39;UBERON:0006240,1.45e-20,39;UBERON:0002020,1.18e-17,34;UBERON:0003528,4.80e-15,29;UBERON:0002791,4.80e-15,29;UBERON:0001893,4.80e-15,29;UBERON:0000956,7.76e-12,21;UBERON:0001869,7.76e-12,21;UBERON:0000203,7.76e-12,21;UBERON:0002619,5.98e-10,17;UBERON:0002021,2.96e-08,10;UBERON:0000411,2.96e-08,10;UBERON:0001950,2.96e-08,10;UBERON:0000970,5.65e-08,9;UBERON:0000019,5.65e-08,9;UBERON:0000047,5.65e-08,9;UBERON:0010312,5.65e-08,9;UBERON:0004088,5.65e-08,9;UBERON:0002104,5.65e-08,9;UBERON:0001456,5.65e-08,9;UBERON:0003072,5.65e-08,9;UBERON:0004128,5.65e-08,9;UBERON:0003071,5.65e-08,9;UBERON:0000020,5.20e-07,12;UBERON:0001032,5.20e-07,12;UBERON:0004456,5.20e-07,12;UBERON:0005085,8.09e-07,13;UBERON:0004111,8.70e-07,122 | |||
|phase1_expression=6.08565618998217,0.348975407639361,0,0.90739263392049,1.00179145989269,0.33575854382378,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,18.9646537036886,0.0992909512008853,0,0,0,0,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0.608261587317087,0,0,20.9304150125229,5.71184075109627,6.02732687130279,11.3389001516544,17.2503077237966,0,0,0,0.257259436035947,0.85960031981627,0.515672092277442,22.659443616275,16.9277113367051,9.50747105259269,3.04960078862219,0,0,0,0,7.78960287347852,15.3687322128622,26.1297823017364,24.436074838036,22.7150958259493,26.2798905651499,25.6207507503872,28.2953746186544,22.2361492762308,27.5765635983006,49.5521464497249,91.5518214070796,77.2640862278905,14.5074916503213,15.3699241252048,22.3992749339407,25.4056529091257,34.8912818219642,42.1723163863996,70.4162319282066,75.7417341851228,24.2319279572891,8.63278603998298,6.2724394888632,0.289864488701678,0,0,0.539703191637817,0,0,2.38755514223978,0,0,0,22.1124169049388,0,0,0,3.030874574157,2.02687892380079,1.51657333504435,2.96878087269556,0,1.92974780784272,1.73485326766136,3.34912026143355,0.922461989024234,2.86373017049983,3.88042733547826,0.628332956648377,1.23597483867187,2.4581890676385,0,1.61766849947409,1.32504911076236,1.45462575940567,0,35.1336956413857,21.9919042154128,0,0.11981512450592,0,0.127070227073065,69.9522286020522,49.4100651044117,21.9895116197513,107.423429878827,98.1947356148469,92.4656798290042,65.0587464901708,4.68461073711455,2.11491850037158,0.505445516867349,57.2401848011209,268.438473832058,254.961433816721,501.292969378092,615.629180858896,848.142998420453,1029.39374248877,850.717957277778,160.137386487451,1.5089759505299,0.567318240503458,3.16712023495108,0.657587197282725,1.66828349535359,1.39300866608867,3.08673204611915,3.18454826909589,0,0,0,0.207125772535502,0.703578179943289,1.62055855314913,2.3674473558521,1.57411385397923,1.69693824176116,0.697601834251224,1.07309360559848,2.21854150497622,0.822799249567402,2.79084688934462,2.1888578577381,2.48539978623065,2.85415149878366,1.07365135008297,56.7782861123144,10.1875566255492,0,0.264450566663544,0.213288250535234,1.39342003116263,2.57734922644187,1.61346819698674,1.33426826306922,1.52180500890047,1.42358718463353,0.823494773620054,0.502670417600539,0.795825888164603,0.58489226135736,0,0,0,0.569003702859245,1.5994791765362,1.1270773567308,0.814605311381257,1.16371492300575,0.771494018793504,0.948548056863859,1.18088118383682,0.784993639206874,0.740382983530803,0,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0,0,0.162135226775035,0.274561413188081,0,0.372140947668503,0,0,0,0,0.554259570499814,1.51593129416388,5.86673915191293,8.31750920298422,7.27539769694356,2.01007508930179,1.6663054862021,1.36593553500459,1.41871629695572,0.664394068946325,0.318909537314974,0.327726629431476,0.172684981865896,0.578596234326046,0,0,0,1.93155722413313,49.4495817162399,45.3609227111826,0,1.51482556322624,1.26203287766503,1.56175497718655,1.50796378412959,1.91175038362042,1.78238939265915,3.67999490025482,1.21443210502468,1.16902343164525,1.58115111178609,36.3093087556642,5.81954349353901,6.7664929393557,12.2165219515182,53.1203795971564,0,0,0.302323556964751,1.13163047853539,0.295301892880773,1.53717573971964,0.258428293168221,0.363533729477506,1.06949213515416,0.948110273807448,0,0,74.5562736600796,89.4903637335612,21.8616175592855,40.0810255509078,39.546872102227,31.3929118979644,28.7960786053712,26.4884505729701,20.6511103096065,4.44847348814022,14.1138174755176,11.5420377059036,1.29171541356724,1.08563264870681,0.835606408021955,1.31312719796049,0,48.9522797307746,0,1.03193433981611,0.370389054739423,0,0.136694227721025,0.228778173206523,0,0,0.276399947608848,0,0.632671987162271,1.21991680276109,1.72808545314882,1.67270636811575,1.52853794622324,1.34864346384821,0.991841468704031,1.04702376793612,0.259229946583586,0,0,1.04661582230785,1.32366792365678,1.36115831840833,1.03327858782185,1.01373675294467,2.11243029562357,0.911430693907651,0.524296722128554,0,0.576060012515731,0,0.202725215290164,0.308132871494482,0.129920822977795,0.179026695667481,0,0,0,0.100966449948148,0.15241361331,0,0.194915761479505,0,0.116876902181569,0.680191150845634,0,0,0,1.15913756419314,32.4690682530545,53.1139710375069,12.6477343656649,49.655638299501,139.493705126415,155.589929939426,155.827579655516,224.268402958512,119.889440959862,133.704719837977,120.829027541493,117.083512838297,122.348450425735,133.58216043197,4.4628559461196,2.79317411380722,5.63420898988643,10.9398022680732,10.6902712940271,12.685202083051,15.7795176739147,15.0405591784393,16.3668796891826,15.4145299175916,13.4344028941827,15.4673599936582,18.7283014939765,16.0703132536222,19.5280594449085,15.7176918123414,13.5584661355481,11.3816440073586,8.65380391686944,10.3039244094078,16.4577241144999,14.9079677173843,18.598022815891,15.2613737463945,16.2809228118522,17.007536186227,13.7195979654579,10.7858581689516,17.79033891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| |phase1_expression=6.08565618998217,0.348975407639361,0,0.90739263392049,1.00179145989269,0.33575854382378,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,18.9646537036886,0.0992909512008853,0,0,0,0,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0.608261587317087,0,0,20.9304150125229,5.71184075109627,6.02732687130279,11.3389001516544,17.2503077237966,0,0,0,0.257259436035947,0.85960031981627,0.515672092277442,22.659443616275,16.9277113367051,9.50747105259269,3.04960078862219,0,0,0,0,7.78960287347852,15.3687322128622,26.1297823017364,24.436074838036,22.7150958259493,26.2798905651499,25.6207507503872,28.2953746186544,22.2361492762308,27.5765635983006,49.5521464497249,91.5518214070796,77.2640862278905,14.5074916503213,15.3699241252048,22.3992749339407,25.4056529091257,34.8912818219642,42.1723163863996,70.4162319282066,75.7417341851228,24.2319279572891,8.63278603998298,6.2724394888632,0.289864488701678,0,0,0.539703191637817,0,0,2.38755514223978,0,0,0,22.1124169049388,0,0,0,3.030874574157,2.02687892380079,1.51657333504435,2.96878087269556,0,1.92974780784272,1.73485326766136,3.34912026143355,0.922461989024234,2.86373017049983,3.88042733547826,0.628332956648377,1.23597483867187,2.4581890676385,0,1.61766849947409,1.32504911076236,1.45462575940567,0,35.1336956413857,21.9919042154128,0,0.11981512450592,0,0.127070227073065,69.9522286020522,49.4100651044117,21.9895116197513,107.423429878827,98.1947356148469,92.4656798290042,65.0587464901708,4.68461073711455,2.11491850037158,0.505445516867349,57.2401848011209,268.438473832058,254.961433816721,501.292969378092,615.629180858896,848.142998420453,1029.39374248877,850.717957277778,160.137386487451,1.5089759505299,0.567318240503458,3.16712023495108,0.657587197282725,1.66828349535359,1.39300866608867,3.08673204611915,3.18454826909589,0,0,0,0.207125772535502,0.703578179943289,1.62055855314913,2.3674473558521,1.57411385397923,1.69693824176116,0.697601834251224,1.07309360559848,2.21854150497622,0.822799249567402,2.79084688934462,2.1888578577381,2.48539978623065,2.85415149878366,1.07365135008297,56.7782861123144,10.1875566255492,0,0.264450566663544,0.213288250535234,1.39342003116263,2.57734922644187,1.61346819698674,1.33426826306922,1.52180500890047,1.42358718463353,0.823494773620054,0.502670417600539,0.795825888164603,0.58489226135736,0,0,0,0.569003702859245,1.5994791765362,1.1270773567308,0.814605311381257,1.16371492300575,0.771494018793504,0.948548056863859,1.18088118383682,0.784993639206874,0.740382983530803,0,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0,0,0.162135226775035,0.274561413188081,0,0.372140947668503,0,0,0,0,0.554259570499814,1.51593129416388,5.86673915191293,8.31750920298422,7.27539769694356,2.01007508930179,1.6663054862021,1.36593553500459,1.41871629695572,0.664394068946325,0.318909537314974,0.327726629431476,0.172684981865896,0.578596234326046,0,0,0,1.93155722413313,49.4495817162399,45.3609227111826,0,1.51482556322624,1.26203287766503,1.56175497718655,1.50796378412959,1.91175038362042,1.78238939265915,3.67999490025482,1.21443210502468,1.16902343164525,1.58115111178609,36.3093087556642,5.81954349353901,6.7664929393557,12.2165219515182,53.1203795971564,0,0,0.302323556964751,1.13163047853539,0.295301892880773,1.53717573971964,0.258428293168221,0.363533729477506,1.06949213515416,0.948110273807448,0,0,74.5562736600796,89.4903637335612,21.8616175592855,40.0810255509078,39.546872102227,31.3929118979644,28.7960786053712,26.4884505729701,20.6511103096065,4.44847348814022,14.1138174755176,11.5420377059036,1.29171541356724,1.08563264870681,0.835606408021955,1.31312719796049,0,48.9522797307746,0,1.03193433981611,0.370389054739423,0,0.136694227721025,0.228778173206523,0,0,0.276399947608848,0,0.632671987162271,1.21991680276109,1.72808545314882,1.67270636811575,1.52853794622324,1.34864346384821,0.991841468704031,1.04702376793612,0.259229946583586,0,0,1.04661582230785,1.32366792365678,1.36115831840833,1.03327858782185,1.01373675294467,2.11243029562357,0.911430693907651,0.524296722128554,0,0.576060012515731,0,0.202725215290164,0.308132871494482,0.129920822977795,0.179026695667481,0,0,0,0.100966449948148,0.15241361331,0,0.194915761479505,0,0.116876902181569,0.680191150845634,0,0,0,1.15913756419314,32.4690682530545,53.1139710375069,12.6477343656649,49.655638299501,139.493705126415,155.589929939426,155.827579655516,224.268402958512,119.889440959862,133.704719837977,120.829027541493,117.083512838297,122.348450425735,133.58216043197,4.4628559461196,2.79317411380722,5.63420898988643,10.9398022680732,10.6902712940271,12.685202083051,15.7795176739147,15.0405591784393,16.3668796891826,15.4145299175916,13.4344028941827,15.4673599936582,18.7283014939765,16.0703132536222,19.5280594449085,15.7176918123414,13.5584661355481,11.3816440073586,8.65380391686944,10.3039244094078,16.4577241144999,14.9079677173843,18.598022815891,15.2613737463945,16.2809228118522,17.007536186227,13.7195979654579,10.7858581689516,17.79033891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| ||
|short_description=p1@Rorb | |short_description=p1@Rorb | ||
}} | }} |
Latest revision as of 23:20, 1 October 2015
Short description: | p1@Rorb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rorb_5end |
Coexpression cluster: | MCL_coexpression_mm9:53 |
Association with transcript: | 0bp_to_ENSMUST00000112832, NM_001043354, uc008gye.1_5end |
EntrezGene: | Rorb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.63e-11 | 23 |
neuroblast (sensu Vertebrata) | 4.63e-11 | 23 |
ectodermal cell | 5.17e-11 | 44 |
neurectodermal cell | 5.17e-11 | 44 |
neural cell | 1.25e-10 | 43 |
neuron | 1.69e-09 | 33 |
neuronal stem cell | 1.69e-09 | 33 |
neuroblast | 1.69e-09 | 33 |
electrically signaling cell | 1.69e-09 | 33 |