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FFCP PHASE1:Mm9::chrX:39855773..39855829,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20400
|EntrezGene=20400
|HGNC=
|HGNC=
|MCL_coexpression_id=33
|TSSclassifier=NA
|UniProt=O88890,Q544F1
|UniProt=O88890,Q544F1
|association_with_transcript=0bp_to_NM_011364,uc009tbb.1_5end
|association_with_transcript=0bp_to_NM_011364,uc009tbb.1_5end
|cluster_id=chrX:39855773..39855829,+
|description=CAGE_peak_1_at_Sh2d1a_5end
|description=CAGE_peak_1_at_Sh2d1a_5end
|id=chrX:39855773..39855829,+
|id=chrX:39855773..39855829,+
|ontology_enrichment_celltype=CL:0000791!4.80e-09!9;CL:0000789!4.80e-09!9;CL:0002420!4.80e-09!9;CL:0002419!4.80e-09!9;CL:0000790!4.80e-09!9;CL:0000624!3.31e-08!8;CL:0000838!2.72e-07!12;CL:0000084!8.95e-07!11;CL:0000827!8.95e-07!11
|ontology_enrichment_celltype=CL:0000791!4.80e-09!9;CL:0000789!4.80e-09!9;CL:0002420!4.80e-09!9;CL:0002419!4.80e-09!9;CL:0000790!4.80e-09!9;CL:0000624!3.31e-08!8;CL:0000838!2.72e-07!12;CL:0000084!8.95e-07!11;CL:0000827!8.95e-07!11
|ontology_enrichment_celltype_v019_2=CL:0000791,1.01e-17,9;CL:0000789,1.01e-17,9;CL:0002420,1.01e-17,9;CL:0002419,1.01e-17,9;CL:0000790,1.01e-17,9;CL:0000624,6.50e-16,8;CL:0000084,3.91e-14,11;CL:0000827,3.91e-14,11;CL:0000838,8.62e-13,12;CL:0000893,5.51e-12,6;CL:0002489,5.51e-12,6;CL:0000898,5.51e-12,6;CL:0000809,5.51e-12,6;CL:0000810,5.51e-12,6;CL:0000895,5.51e-12,6;CL:0000808,5.51e-12,6;CL:0000894,5.51e-12,6;CL:0000806,5.51e-12,6;CL:0000807,5.51e-12,6;CL:0000805,5.51e-12,6;CL:0002425,5.51e-12,6;CL:0002436,5.51e-12,6;CL:0002427,5.51e-12,6;CL:0002428,5.51e-12,6;CL:0002429,5.51e-12,6;CL:0002433,5.51e-12,6;CL:0002431,5.51e-12,6;CL:0002432,5.51e-12,6;CL:0000542,1.18e-11,13;CL:0000051,1.18e-11,13;CL:0002031,5.53e-11,25;CL:0000738,1.86e-08,17;CL:0002087,1.86e-08,17;CL:0000988,6.61e-08,32;CL:0002032,6.61e-08,32;CL:0000037,6.61e-08,32;CL:0000837,6.61e-08,32
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!5.13e-16!29;UBERON:0003408!1.09e-15!24;UBERON:0002370!4.49e-15!23;UBERON:0000974!4.49e-15!23;UBERON:0004807!4.49e-15!23;UBERON:0005058!4.49e-15!23;UBERON:0003351!4.49e-15!23;UBERON:0009113!4.49e-15!23;UBERON:0003295!4.49e-15!23;UBERON:0009722!4.49e-15!23;UBERON:0005562!4.49e-15!23;UBERON:0007690!4.49e-15!23;UBERON:0002193!3.63e-14!48;UBERON:0006562!4.57e-14!24;UBERON:0001557!4.57e-14!24;UBERON:0001042!4.57e-14!24;UBERON:0008814!4.57e-14!24;UBERON:0009145!4.57e-14!24;UBERON:0001004!2.32e-13!42;UBERON:0000065!8.71e-13!41;UBERON:0002390!8.76e-13!45;UBERON:0003061!8.76e-13!45;UBERON:0000072!1.60e-11!27;UBERON:0002405!8.60e-11!70;UBERON:0005057!2.50e-10!51;UBERON:0001041!7.94e-10!92;UBERON:0000077!1.24e-09!97;UBERON:0000063!5.75e-08!35;UBERON:0004119!1.09e-07!130;UBERON:0000925!1.09e-07!130;UBERON:0006595!1.09e-07!130;UBERON:0003081!1.21e-07!88;UBERON:0001007!1.59e-07!128;UBERON:0001555!1.59e-07!128;UBERON:0007026!1.59e-07!128;UBERON:0005911!1.78e-07!69;UBERON:0004921!4.90e-07!126;UBERON:0004185!4.90e-07!126
|ontology_enrichment_uberon_v019_2=UBERON:0004177,3.12e-36,29;UBERON:0005057,3.12e-36,29;UBERON:0003408,2.67e-34,24;UBERON:0002370,5.79e-33,23;UBERON:0000974,5.79e-33,23;UBERON:0004807,5.79e-33,23;UBERON:0005058,5.79e-33,23;UBERON:0003351,5.79e-33,23;UBERON:0009113,5.79e-33,23;UBERON:0003295,5.79e-33,23;UBERON:0009722,5.79e-33,23;UBERON:0005562,5.79e-33,23;UBERON:0007690,5.79e-33,23;UBERON:0006562,2.36e-31,24;UBERON:0001557,2.36e-31,24;UBERON:0001042,2.36e-31,24;UBERON:0008814,2.36e-31,24;UBERON:0009145,2.36e-31,24;UBERON:0000077,3.11e-31,35;UBERON:0002193,1.41e-29,48;UBERON:0002405,1.41e-29,48;UBERON:0002390,1.42e-29,45;UBERON:0003061,1.42e-29,45;UBERON:0001004,7.62e-29,42;UBERON:0000065,1.42e-27,41;UBERON:0000072,3.05e-27,27;UBERON:0007811,6.50e-21,36;UBERON:0001041,6.44e-18,80;UBERON:0000153,1.42e-16,43;UBERON:0005911,8.25e-15,69;UBERON:0003081,9.75e-13,87;UBERON:0003929,9.07e-12,55;UBERON:0004119,3.16e-11,118;UBERON:0000925,3.16e-11,118;UBERON:0006595,3.16e-11,118;UBERON:0004921,4.93e-11,114;UBERON:0001007,1.05e-10,116;UBERON:0001555,1.05e-10,116;UBERON:0007026,1.05e-10,116;UBERON:0002368,2.48e-10,60;UBERON:0002530,4.27e-10,65;UBERON:0000490,6.61e-09,66;UBERON:0000949,1.19e-08,72;UBERON:0000926,5.73e-08,120;UBERON:0004120,5.73e-08,120;UBERON:0006603,5.73e-08,120;UBERON:0001048,1.57e-07,134
|phase1_expression=0,0,0,0,0,0,0,73.8585410085816,14.0788722151667,12.4054198950657,8.73211637950075,11.1681022593471,61.4610620453029,48.4309029401246,0.666219523631325,2.83465374345756,0.699561878128147,9.30613387806801,8.08975158273859,3.81950686618227,2.04103896362567,0,0,0.159992422793407,0.68822784320151,0,0,0,0.190023419456374,0.756090389279792,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.838913030288682,67.458679207055,48.3975070765148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0,0,0,0,0.122490799214954,0,0,0,0.893811366596314,0.153606533256243,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,1.40444420131752,0,0,0,0,0,0,0,0,0,0,2.05530983494308,22.0097201100096,0.890652834388949,0,0,0,0,0,0,0,0.86759614151947,0.884610551949874,0,0.220841518460394,0.969750506270444,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0.20778804455956,0.162241263067758,0,0.497627882440372,0.252722758433675,0,0,0,0.360124259610698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.700592054203017,0,0,0.486412857275134,0.584799949701329,0.219550115291051,0.402619256281115,0,0,0.660837565967596,0,0,0,0,0,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0.156998727841375,0,0.296452627087149,0,0,0,0,0,0,0,0,0,1.43768206527355,0.744281895337007,0.624075346229121,0.252578877947112,0.179397413521912,0.482443521363367,4.24932337383191,0,0,0,0,1.84256883185997,0,0.390267295715598,0.157635144106191,1.32878813789265,0.318909537314974,1.96635977658886,1.38147985492716,1.3018415272336,0,0,0.491764273019036,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,2.65490276679926,0,0.302323556964751,0,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0.304464949114599,1.17335854031855,0,0,0,0,0,0,0,0.582961673259701,0,4.95525554313773,0,0,1.69531611304222,2.32380187125743,2.97411625168479,0,0,0.138199973804424,0.954670618015114,0,0.406638934253697,0.216010681643603,0,0,0.134864346384821,0.0826534557253359,0,0,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,93.2232805853126,1.62180172232131,8.21687657318618,27.5432144712925,40.1019798295158,61.5912199821921,54.4485386325459,64.0972547937665,70.3736156138589,63.1754427169949,74.8130293715357,69.8773004904025,84.1853614352883,96.0728135932497,0,0,0,0,0.19318959403219,1.50145980360946,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.551530525350042,0.222246727801615,0.412070114477788,0.320919209591815,0.505394423527595,0.50695859978048,0.188626341386076,0.0936415074698824,0.0640251524048693,0.229741875822453,0,0,0,0,0.294397840268795,0.342869252385415,0.70990322463735,0.238436189947321,0,0.282328141245992,0.25384382367503,0.182927972872773,0,0,1.68342681497322,0.355905054372522,0.394017929502254,0.409231043169689,0.154936841185966,0.385813221962283,0,0.233931608445408,0.429742108096597,0,0.220591419119515,0
|phase1_expression=0,0,0,0,0,0,0,73.8585410085816,14.0788722151667,12.4054198950657,8.73211637950075,11.1681022593471,61.4610620453029,48.4309029401246,0.666219523631325,2.83465374345756,0.699561878128147,9.30613387806801,8.08975158273859,3.81950686618227,2.04103896362567,0,0,0.159992422793407,0.68822784320151,0,0,0,0.190023419456374,0.756090389279792,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.838913030288682,67.458679207055,48.3975070765148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0,0,0,0,0.122490799214954,0,0,0,0.893811366596314,0.153606533256243,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,1.40444420131752,0,0,0,0,0,0,0,0,0,0,2.05530983494308,22.0097201100096,0.890652834388949,0,0,0,0,0,0,0,0.86759614151947,0.884610551949874,0,0.220841518460394,0.969750506270444,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0.20778804455956,0.162241263067758,0,0.497627882440372,0.252722758433675,0,0,0,0.360124259610698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.700592054203017,0,0,0.486412857275134,0.584799949701329,0.219550115291051,0.402619256281115,0,0,0.660837565967596,0,0,0,0,0,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0.156998727841375,0,0.296452627087149,0,0,0,0,0,0,0,0,0,1.43768206527355,0.744281895337007,0.624075346229121,0.252578877947112,0.179397413521912,0.482443521363367,4.24932337383191,0,0,0,0,1.84256883185997,0,0.390267295715598,0.157635144106191,1.32878813789265,0.318909537314974,1.96635977658886,1.38147985492716,1.3018415272336,0,0,0.491764273019036,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,2.65490276679926,0,0.302323556964751,0,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0.304464949114599,1.17335854031855,0,0,0,0,0,0,0,0.582961673259701,0,4.95525554313773,0,0,1.69531611304222,2.32380187125743,2.97411625168479,0,0,0.138199973804424,0.954670618015114,0,0.406638934253697,0.216010681643603,0,0,0.134864346384821,0.0826534557253359,0,0,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,93.2232805853126,1.62180172232131,8.21687657318618,27.5432144712925,40.1019798295158,61.5912199821921,54.4485386325459,64.0972547937665,70.3736156138589,63.1754427169949,74.8130293715357,69.8773004904025,84.1853614352883,96.0728135932497,0,0,0,0,0.19318959403219,1.50145980360946,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.551530525350042,0.222246727801615,0.412070114477788,0.320919209591815,0.505394423527595,0.50695859978048,0.188626341386076,0.0936415074698824,0.0640251524048693,0.229741875822453,0,0,0,0,0.294397840268795,0.342869252385415,0.70990322463735,0.238436189947321,0,0.282328141245992,0.25384382367503,0.182927972872773,0,0,1.68342681497322,0.355905054372522,0.394017929502254,0.409231043169689,0.154936841185966,0.385813221962283,0,0.233931608445408,0.429742108096597,0,0.220591419119515,0
|short_description=p1@Sh2d1a
|short_description=p1@Sh2d1a
}}
}}

Latest revision as of 20:49, 1 October 2015

Short description:p1@Sh2d1a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Sh2d1a_5end
Coexpression cluster:MCL_coexpression_mm9:33
Association with transcript: 0bp_to_NM_011364, uc009tbb.1_5end
EntrezGene:Sh2d1a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Sh2d1a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E973.86
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E714.08
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F212.41
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E68.73
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F111.17
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E461.46
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E848.43
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.83
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A29.31
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A48.09
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.82
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.84
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I967.46
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A148.40
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.89
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.06
accessory axillary lymph node, adult.CNhs10475.1063-29H922.01
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B14.25
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A61.84
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A41.97
lung, neonate N25.CNhs11119.1359-25C71.38
lung, neonate N30.CNhs11133.1394-42H21.30
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I71.17
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G24.96
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D11.70
spleen, neonate N20.CNhs11112.824-19H12.32
spleen, neonate N25.CNhs11099.1354-25G32.97
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B593.22
thymus, embryo E14.CNhs11041.402-44I41.62
thymus, embryo E15.CNhs11005.430-45I28.22
thymus, embryo E16.CNhs11002.456-26C527.54
thymus, embryo E17.CNhs10581.478-18C140.10
thymus, embryo E18.CNhs10595.1273-19G461.59
thymus, neonate N02.CNhs11181.1541-43F854.45
thymus, neonate N03.CNhs11137.2104-43C764.10
thymus, neonate N06.CNhs11197.681-26C470.37
thymus, neonate N07.CNhs11211.713-19D363.18
thymus, neonate N10.CNhs11194.748-24E474.81
thymus, neonate N20.CNhs11186.820-7A269.88
thymus, neonate N25.CNhs11125.1362-25G784.19
thymus, neonate N30.CNhs11132.1393-42G296.07
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F51.50
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell1.01e-179
alpha-beta T cell1.01e-179
immature T cell1.01e-179
mature T cell1.01e-179
immature alpha-beta T cell1.01e-179
CD4-positive, alpha-beta T cell6.50e-168
T cell3.91e-1411
pro-T cell3.91e-1411
lymphoid lineage restricted progenitor cell8.62e-1312
thymocyte5.51e-126
double negative thymocyte5.51e-126
naive T cell5.51e-126
double-positive, alpha-beta thymocyte5.51e-126
CD4-positive, alpha-beta thymocyte5.51e-126
naive thymus-derived CD4-positive, alpha-beta T cell5.51e-126
DN4 thymocyte5.51e-126
DN1 thymic pro-T cell5.51e-126
DN2 thymocyte5.51e-126
DN3 thymocyte5.51e-126
immature single positive thymocyte5.51e-126
early T lineage precursor5.51e-126
mature CD4 single-positive thymocyte5.51e-126
resting double-positive thymocyte5.51e-126
double-positive blast5.51e-126
CD69-positive double-positive thymocyte5.51e-126
CD69-positive, CD4-positive single-positive thymocyte5.51e-126
CD4-positive, CD8-intermediate double-positive thymocyte5.51e-126
CD24-positive, CD4 single-positive thymocyte5.51e-126
lymphocyte1.18e-1113
common lymphoid progenitor1.18e-1113
hematopoietic lineage restricted progenitor cell5.53e-1125
leukocyte1.86e-0817
nongranular leukocyte1.86e-0817
hematopoietic cell6.61e-0832
hematopoietic oligopotent progenitor cell6.61e-0832
hematopoietic stem cell6.61e-0832
hematopoietic multipotent progenitor cell6.61e-0832

Uber anatomy
Ontology termp-valuen
hemopoietic organ3.12e-3629
immune organ3.12e-3629
gland of gut2.67e-3424
thymus5.79e-3323
neck5.79e-3323
respiratory system epithelium5.79e-3323
hemolymphoid system gland5.79e-3323
pharyngeal epithelium5.79e-3323
thymic region5.79e-3323
pharyngeal gland5.79e-3323
entire pharyngeal arch endoderm5.79e-3323
thymus primordium5.79e-3323
early pharyngeal endoderm5.79e-3323
pharynx2.36e-3124
upper respiratory tract2.36e-3124
chordate pharynx2.36e-3124
pharyngeal arch system2.36e-3124
pharyngeal region of foregut2.36e-3124
mixed endoderm/mesoderm-derived structure3.11e-3135
hemolymphoid system1.41e-2948
immune system1.41e-2948
hematopoietic system1.42e-2945
blood island1.42e-2945
respiratory system7.62e-2942
respiratory tract1.42e-2741
segment of respiratory tract3.05e-2727
craniocervical region6.50e-2136
foregut6.44e-1880
anterior region of body1.42e-1643
endo-epithelium8.25e-1569
lateral plate mesoderm9.75e-1387
gut epithelium9.07e-1255
endoderm-derived structure3.16e-11118
endoderm3.16e-11118
presumptive endoderm3.16e-11118
subdivision of digestive tract4.93e-11114
digestive system1.05e-10116
digestive tract1.05e-10116
primitive gut1.05e-10116
endocrine gland2.48e-1060
gland4.27e-1065
unilaminar epithelium6.61e-0966
endocrine system1.19e-0872
mesoderm5.73e-08120
mesoderm-derived structure5.73e-08120
presumptive mesoderm5.73e-08120
primordium1.57e-07134
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