Personal tools

FFCP PHASE1:Mm9::chr2:58998681..58998692,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=227933
|EntrezGene=227933
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=B1AYZ6,Q6P5U8
|UniProt=B1AYZ6,Q6P5U8
|association_with_transcript=0bp_to_NM_001001178,uc008jsx.1_5end
|association_with_transcript=0bp_to_NM_001001178,uc008jsx.1_5end
|cluster_id=chr2:58998681..58998692,-
|description=CAGE_peak_1_at_Ccdc148_5end
|description=CAGE_peak_1_at_Ccdc148_5end
|id=chr2:58998681..58998692,-
|id=chr2:58998681..58998692,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!2.38e-13!63;UBERON:0002346!2.89e-13!71;UBERON:0003075!2.89e-13!71;UBERON:0007284!2.89e-13!71;UBERON:0004121!3.33e-11!102;UBERON:0000924!3.33e-11!102;UBERON:0006601!3.33e-11!102;UBERON:0001017!6.37e-11!73;UBERON:0005743!6.37e-11!73;UBERON:0001049!1.34e-10!52;UBERON:0005068!1.34e-10!52;UBERON:0006241!1.34e-10!52;UBERON:0007135!1.34e-10!52;UBERON:0003056!2.36e-10!49;UBERON:0000073!5.62e-10!75;UBERON:0001016!5.62e-10!75;UBERON:0000955!4.10e-09!50;UBERON:0006238!4.10e-09!50;UBERON:0002616!7.91e-09!49;UBERON:0003080!3.38e-07!40;UBERON:0002780!9.82e-07!39;UBERON:0001890!9.82e-07!39;UBERON:0006240!9.82e-07!39
|ontology_enrichment_uberon=UBERON:0000033!2.38e-13!63;UBERON:0002346!2.89e-13!71;UBERON:0003075!2.89e-13!71;UBERON:0007284!2.89e-13!71;UBERON:0004121!3.33e-11!102;UBERON:0000924!3.33e-11!102;UBERON:0006601!3.33e-11!102;UBERON:0001017!6.37e-11!73;UBERON:0005743!6.37e-11!73;UBERON:0001049!1.34e-10!52;UBERON:0005068!1.34e-10!52;UBERON:0006241!1.34e-10!52;UBERON:0007135!1.34e-10!52;UBERON:0003056!2.36e-10!49;UBERON:0000073!5.62e-10!75;UBERON:0001016!5.62e-10!75;UBERON:0000955!4.10e-09!50;UBERON:0006238!4.10e-09!50;UBERON:0002616!7.91e-09!49;UBERON:0003080!3.38e-07!40;UBERON:0002780!9.82e-07!39;UBERON:0001890!9.82e-07!39;UBERON:0006240!9.82e-07!39
|ontology_enrichment_uberon_v019_2=UBERON:0010371,5.99e-14,73;UBERON:0002346,6.51e-14,64;UBERON:0003075,6.51e-14,64;UBERON:0007284,6.51e-14,64;UBERON:0000073,2.67e-13,54;UBERON:0001049,6.99e-13,52;UBERON:0005068,6.99e-13,52;UBERON:0006241,6.99e-13,52;UBERON:0007135,6.99e-13,52;UBERON:0004121,1.03e-12,95;UBERON:0000924,1.03e-12,95;UBERON:0006601,1.03e-12,95;UBERON:0001017,1.62e-12,73;UBERON:0001016,5.48e-12,75;UBERON:0002616,6.91e-11,46;UBERON:0000955,1.52e-10,47;UBERON:0006238,1.52e-10,47;UBERON:0010314,2.45e-10,92;UBERON:0003056,7.95e-10,49;UBERON:0003080,6.05e-08,40;UBERON:0002420,2.23e-07,8;UBERON:0007245,2.23e-07,8;UBERON:0010009,2.23e-07,8;UBERON:0010011,2.23e-07,8;UBERON:0000454,2.23e-07,8;UBERON:0002950,2.31e-07,4;UBERON:0001891,2.31e-07,4;UBERON:0009616,2.31e-07,4;UBERON:0010286,2.31e-07,4;UBERON:0002780,4.36e-07,39;UBERON:0001890,4.36e-07,39;UBERON:0006240,4.36e-07,39
|phase1_expression=4.96461426024861,2.79180326111489,0.454999239389536,1.20985684522732,3.50627010962443,0.16787927191189,0.233612640595526,0,0,0.468129052643987,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0.45881856213434,0.57423196411502,0,0.430942465371778,0.950117097281869,0.756090389279792,0.221730510655305,0,0,0,0.577703239502549,0,0.612508068787107,0,0,0,0,0,0,0,0.202753862439029,0.183546752161682,0,0.218025156380447,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0.633831403506179,0,0,0,0,0,0.599200221036809,1.53687322128622,0.103689612308478,0.135005938331691,0,1.71390590642282,0.441737081903227,0,0.287536413054709,0,0,1.40456071893706,1.99688493233117,0.791317726381163,0.548925861614458,1.04182674111352,1.11673199600552,1.68828783009504,3.97275444219706,0.883885756421003,1.70846016958924,0.372798891650601,0,0,1.15945795480671,0,0.679971333707751,0,0.649776417447669,0,0.140444420131752,0.170430322578058,0,0,12.1125341007945,0,0,0,0,0.506719730950197,0,0.5709193985953,0.258937883647172,1.03909497345377,0.173485326766136,0,0.230615497256059,0.452167921657868,0.352766121407114,0.251333182659351,0,0.144599356919912,0,0,0,0,0,1.75668478206928,1.46612694769419,1.02182822083437,0,0,0,1.79748767285787,2.74500361691176,1.88481528169297,2.25971616249959,1.79000820131231,2.70124457927428,2.27137768294861,0.407357455401265,0.248813941220186,0.505445516867349,0.841767423545896,0.520481771850815,0.459804208866946,0.720248519221397,1.05493372485001,2.04109497453984,2.17793324484245,0.562210347358373,1.29351685369508,0,0,0.175951124163949,0,0.834141747676794,0,0,0.398068533636986,0,0,0,0,0.234526059981096,0.180062061461015,0.710234206755631,0.393528463494808,0.154267112887378,0.232533944750408,0,0.116765342367169,0.16455984991348,0,0.162137619091711,0,0,0,4.83666881697493,1.44066457330998,1.65209391491899,1.05780226665418,0,0.232236671860439,0.257734922644187,0.403367049246685,0.22237804384487,0,0,0.164698954724011,0.502670417600539,0.198956472041151,0.58489226135736,0.898819408654221,0.216138049874694,0.796565093017469,0,0.342745537829186,0,0.203651327845314,0,0.841629838683823,1.45444035385792,4.13308414342886,3.29697328466887,3.94870924549762,0.889357881261447,0,0.196558995113203,0,0,0,0,0,0,0,0,0.372140947668503,0.312037673114561,0.252578877947112,0,0,0.184753190166605,0.189491411770485,0.325929952884052,0.509235257325564,1.17345124144251,0.670025029767263,0.238043640886014,0.195133647857799,0,0,0.159454768657487,0.163863314715738,0,0.289298117163023,1.50791283939272,0,0,0,3.37156238974363,1.28932855251423,0,0.252470927204373,0,0.390438744296638,0.215423397732799,0,0.445597348164788,0,0,1.16902343164525,0.395287777946524,0.642642632843614,0.425820255624806,0.35613120733451,0.325773918707152,0.659880491890142,0,0,0.302323556964751,0.188605079755898,0,0.614870295887855,1.03371317267288,1.09060118843252,0,0.316036757935816,0,0,14.6389030474129,0.18006109403131,0.258717367565509,0.428674070063185,0.532020700926821,0.356737635204141,1.64549020602121,0.304464949114599,0,0,0,0.16488625294148,0.322928853391811,0.0603129249281559,0,0,0,5.19190845629427,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.216010681643603,0,0.436725127492355,0,0.165306911450672,0,0.388844919875379,0.621339313086926,1.69107881605257,0,0,0.194451188344048,0.258319646955462,0.168956125490778,0.117357238645754,0.2604087696879,0.209718688851422,1.69108884578204,2.01621004380506,0.316011120628178,0,0.102710957164827,0.25984164595559,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0,0,0,0,0,0.750729901804728,0.36630324853453,0.214368379079066,0.501572104035363,0.564751842617067,0.460325236507177,1.71868654031819,0.859265911718438,2.05524755931193,0.755393897389701,0.675022500231806,0,0.453142408984205,0,0.207574695168353,0.399024873401031,0.170733605754134,0.729320151204882,0.419226325255965,0,0.888986911206461,0.206035057238894,0.64183841918363,0.252697211763798,0.50695859978048,0.188626341386076,0.468207537349412,0.256100609619477,0.402048282689293,0,0.231768651889711,0.38581844092741,0.412085900803307,0.735994600671987,0.342869252385415,0.532427418478012,0.715308569841963,0.290692833264657,0.564656282491984,0.338458431566706,0.182927972872773,0.526139422875686,0.407412341537585,0.561142271657738,0,0.197008964751127,0.409231043169689,0.154936841185966,0,0.749431733813838,0,0.429742108096597,0.191288332068843,0,0
|phase1_expression=4.96461426024861,2.79180326111489,0.454999239389536,1.20985684522732,3.50627010962443,0.16787927191189,0.233612640595526,0,0,0.468129052643987,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0.45881856213434,0.57423196411502,0,0.430942465371778,0.950117097281869,0.756090389279792,0.221730510655305,0,0,0,0.577703239502549,0,0.612508068787107,0,0,0,0,0,0,0,0.202753862439029,0.183546752161682,0,0.218025156380447,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0.633831403506179,0,0,0,0,0,0.599200221036809,1.53687322128622,0.103689612308478,0.135005938331691,0,1.71390590642282,0.441737081903227,0,0.287536413054709,0,0,1.40456071893706,1.99688493233117,0.791317726381163,0.548925861614458,1.04182674111352,1.11673199600552,1.68828783009504,3.97275444219706,0.883885756421003,1.70846016958924,0.372798891650601,0,0,1.15945795480671,0,0.679971333707751,0,0.649776417447669,0,0.140444420131752,0.170430322578058,0,0,12.1125341007945,0,0,0,0,0.506719730950197,0,0.5709193985953,0.258937883647172,1.03909497345377,0.173485326766136,0,0.230615497256059,0.452167921657868,0.352766121407114,0.251333182659351,0,0.144599356919912,0,0,0,0,0,1.75668478206928,1.46612694769419,1.02182822083437,0,0,0,1.79748767285787,2.74500361691176,1.88481528169297,2.25971616249959,1.79000820131231,2.70124457927428,2.27137768294861,0.407357455401265,0.248813941220186,0.505445516867349,0.841767423545896,0.520481771850815,0.459804208866946,0.720248519221397,1.05493372485001,2.04109497453984,2.17793324484245,0.562210347358373,1.29351685369508,0,0,0.175951124163949,0,0.834141747676794,0,0,0.398068533636986,0,0,0,0,0.234526059981096,0.180062061461015,0.710234206755631,0.393528463494808,0.154267112887378,0.232533944750408,0,0.116765342367169,0.16455984991348,0,0.162137619091711,0,0,0,4.83666881697493,1.44066457330998,1.65209391491899,1.05780226665418,0,0.232236671860439,0.257734922644187,0.403367049246685,0.22237804384487,0,0,0.164698954724011,0.502670417600539,0.198956472041151,0.58489226135736,0.898819408654221,0.216138049874694,0.796565093017469,0,0.342745537829186,0,0.203651327845314,0,0.841629838683823,1.45444035385792,4.13308414342886,3.29697328466887,3.94870924549762,0.889357881261447,0,0.196558995113203,0,0,0,0,0,0,0,0,0.372140947668503,0.312037673114561,0.252578877947112,0,0,0.184753190166605,0.189491411770485,0.325929952884052,0.509235257325564,1.17345124144251,0.670025029767263,0.238043640886014,0.195133647857799,0,0,0.159454768657487,0.163863314715738,0,0.289298117163023,1.50791283939272,0,0,0,3.37156238974363,1.28932855251423,0,0.252470927204373,0,0.390438744296638,0.215423397732799,0,0.445597348164788,0,0,1.16902343164525,0.395287777946524,0.642642632843614,0.425820255624806,0.35613120733451,0.325773918707152,0.659880491890142,0,0,0.302323556964751,0.188605079755898,0,0.614870295887855,1.03371317267288,1.09060118843252,0,0.316036757935816,0,0,14.6389030474129,0.18006109403131,0.258717367565509,0.428674070063185,0.532020700926821,0.356737635204141,1.64549020602121,0.304464949114599,0,0,0,0.16488625294148,0.322928853391811,0.0603129249281559,0,0,0,5.19190845629427,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.216010681643603,0,0.436725127492355,0,0.165306911450672,0,0.388844919875379,0.621339313086926,1.69107881605257,0,0,0.194451188344048,0.258319646955462,0.168956125490778,0.117357238645754,0.2604087696879,0.209718688851422,1.69108884578204,2.01621004380506,0.316011120628178,0,0.102710957164827,0.25984164595559,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0,0,0,0,0,0.750729901804728,0.36630324853453,0.214368379079066,0.501572104035363,0.564751842617067,0.460325236507177,1.71868654031819,0.859265911718438,2.05524755931193,0.755393897389701,0.675022500231806,0,0.453142408984205,0,0.207574695168353,0.399024873401031,0.170733605754134,0.729320151204882,0.419226325255965,0,0.888986911206461,0.206035057238894,0.64183841918363,0.252697211763798,0.50695859978048,0.188626341386076,0.468207537349412,0.256100609619477,0.402048282689293,0,0.231768651889711,0.38581844092741,0.412085900803307,0.735994600671987,0.342869252385415,0.532427418478012,0.715308569841963,0.290692833264657,0.564656282491984,0.338458431566706,0.182927972872773,0.526139422875686,0.407412341537585,0.561142271657738,0,0.197008964751127,0.409231043169689,0.154936841185966,0,0.749431733813838,0,0.429742108096597,0.191288332068843,0,0
|short_description=p1@Ccdc148
|short_description=p1@Ccdc148
}}
}}

Latest revision as of 19:22, 26 September 2015

Short description:p1@Ccdc148
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ccdc148_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_NM_001001178, uc008jsx.1_5end
EntrezGene:Ccdc148
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ccdc148

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.79
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.40
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.97
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G612.11
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.80
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F11.88
cortex, adult.CNhs10473.12-14D52.26
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F22.70
diencephalon, neonate N30.CNhs11201.1388-42B22.27
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C62.04
eyeball, neonate N01.CNhs11140.1532-43E72.18
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E84.84
hippocampus, neonate N00.CNhs11228.627-43G11.44
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.84
kidney, neonate N10.CNhs11206.758-6D51.45
kidney, neonate N20.CNhs11113.832-19I14.13
kidney, neonate N25.CNhs11122.1353-25F33.30
kidney, neonate N30.CNhs11203.1385-42H13.95
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.37
medulla oblongata, neonate N30.CNhs11200.1396-42A31.29
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G814.64
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C95.19
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H31.69
testis, neonate N30.CNhs11130.1391-42E22.02
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
ecto-epithelium5.99e-1473
neurectoderm6.51e-1464
neural plate6.51e-1464
presumptive neural plate6.51e-1464
regional part of nervous system2.67e-1354
neural tube6.99e-1352
neural rod6.99e-1352
future spinal cord6.99e-1352
neural keel6.99e-1352
ectoderm-derived structure1.03e-1295
ectoderm1.03e-1295
presumptive ectoderm1.03e-1295
central nervous system1.62e-1273
nervous system5.48e-1275
regional part of brain6.91e-1146
brain1.52e-1047
future brain1.52e-1047
structure with developmental contribution from neural crest2.45e-1092
pre-chordal neural plate7.95e-1049
anterior neural tube6.05e-0840
basal ganglion2.23e-078
nuclear complex of neuraxis2.23e-078
aggregate regional part of brain2.23e-078
collection of basal ganglia2.23e-078
cerebral subcortex2.23e-078
regional part of midbrain2.31e-074
midbrain2.31e-074
presumptive midbrain2.31e-074
midbrain neural tube2.31e-074
regional part of forebrain4.36e-0739
forebrain4.36e-0739
future forebrain4.36e-0739
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:58998681..58998692,-&oldid=4270076"