FFCP PHASE1:Mm9::chr4:140924031..140924094,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=277743 | |EntrezGene=277743 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=87 | |||
|TSSclassifier=NA | |||
|UniProt=A2ADB2 | |UniProt=A2ADB2 | ||
|association_with_transcript=-40bp_to_ENSMUST00000006380,NM_001085513,uc008vod.1_5end | |association_with_transcript=-40bp_to_ENSMUST00000006380,NM_001085513,uc008vod.1_5end | ||
|cluster_id=chr4:140924031..140924094,+ | |||
|description=CAGE_peak_1_at_Fam131c_5end | |description=CAGE_peak_1_at_Fam131c_5end | ||
|id=chr4:140924031..140924094,+ | |id=chr4:140924031..140924094,+ | ||
|ontology_enrichment_celltype=CL:0000117!5.54e-15!23;CL:0000337!5.54e-15!23;CL:0000540!2.49e-10!33;CL:0000047!2.49e-10!33;CL:0000031!2.49e-10!33;CL:0000404!2.49e-10!33 | |ontology_enrichment_celltype=CL:0000117!5.54e-15!23;CL:0000337!5.54e-15!23;CL:0000540!2.49e-10!33;CL:0000047!2.49e-10!33;CL:0000031!2.49e-10!33;CL:0000404!2.49e-10!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.39e-17,23;CL:0000337,2.39e-17,23;CL:0000540,1.42e-10,33;CL:0000047,1.42e-10,33;CL:0000031,1.42e-10,33;CL:0000404,1.42e-10,33;CL:0000393,3.17e-07,39;CL:0000211,3.17e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.30e-13!73;UBERON:0005743!3.30e-13!73;UBERON:0001049!3.44e-13!52;UBERON:0005068!3.44e-13!52;UBERON:0006241!3.44e-13!52;UBERON:0007135!3.44e-13!52;UBERON:0000073!2.62e-12!75;UBERON:0001016!2.62e-12!75;UBERON:0004121!6.08e-12!102;UBERON:0000924!6.08e-12!102;UBERON:0006601!6.08e-12!102;UBERON:0002020!1.17e-11!34;UBERON:0000955!1.49e-11!50;UBERON:0006238!1.49e-11!50;UBERON:0002616!2.70e-11!49;UBERON:0002346!2.92e-11!71;UBERON:0003075!2.92e-11!71;UBERON:0007284!2.92e-11!71;UBERON:0000033!3.71e-11!63;UBERON:0003080!3.01e-09!40;UBERON:0002780!8.88e-09!39;UBERON:0001890!8.88e-09!39;UBERON:0006240!8.88e-09!39;UBERON:0002791!1.52e-08!29;UBERON:0003528!1.52e-08!29;UBERON:0001893!1.52e-08!29;UBERON:0003056!7.01e-08!49;UBERON:0000468!1.87e-07!333 | |ontology_enrichment_uberon=UBERON:0001017!3.30e-13!73;UBERON:0005743!3.30e-13!73;UBERON:0001049!3.44e-13!52;UBERON:0005068!3.44e-13!52;UBERON:0006241!3.44e-13!52;UBERON:0007135!3.44e-13!52;UBERON:0000073!2.62e-12!75;UBERON:0001016!2.62e-12!75;UBERON:0004121!6.08e-12!102;UBERON:0000924!6.08e-12!102;UBERON:0006601!6.08e-12!102;UBERON:0002020!1.17e-11!34;UBERON:0000955!1.49e-11!50;UBERON:0006238!1.49e-11!50;UBERON:0002616!2.70e-11!49;UBERON:0002346!2.92e-11!71;UBERON:0003075!2.92e-11!71;UBERON:0007284!2.92e-11!71;UBERON:0000033!3.71e-11!63;UBERON:0003080!3.01e-09!40;UBERON:0002780!8.88e-09!39;UBERON:0001890!8.88e-09!39;UBERON:0006240!8.88e-09!39;UBERON:0002791!1.52e-08!29;UBERON:0003528!1.52e-08!29;UBERON:0001893!1.52e-08!29;UBERON:0003056!7.01e-08!49;UBERON:0000468!1.87e-07!333 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.49e-14,54;UBERON:0001049,7.14e-13,52;UBERON:0005068,7.14e-13,52;UBERON:0006241,7.14e-13,52;UBERON:0007135,7.14e-13,52;UBERON:0001017,3.98e-12,73;UBERON:0002020,1.21e-11,34;UBERON:0001016,2.92e-11,75;UBERON:0002346,6.24e-10,64;UBERON:0003075,6.24e-10,64;UBERON:0007284,6.24e-10,64;UBERON:0010371,1.30e-09,73;UBERON:0004121,1.56e-09,95;UBERON:0000924,1.56e-09,95;UBERON:0006601,1.56e-09,95;UBERON:0000955,2.38e-09,47;UBERON:0006238,2.38e-09,47;UBERON:0002616,4.55e-09,46;UBERON:0003080,2.41e-08,40;UBERON:0003528,3.50e-08,29;UBERON:0002791,3.50e-08,29;UBERON:0001893,3.50e-08,29;UBERON:0002780,7.66e-08,39;UBERON:0001890,7.66e-08,39;UBERON:0006240,7.66e-08,39;UBERON:0002420,7.74e-07,8;UBERON:0007245,7.74e-07,8;UBERON:0010009,7.74e-07,8;UBERON:0010011,7.74e-07,8;UBERON:0000454,7.74e-07,8 | |||
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| ||
|short_description=p1@Fam131c | |short_description=p1@Fam131c | ||
}} | }} |
Latest revision as of 15:23, 26 September 2015
Short description: | p1@Fam131c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fam131c_5end |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | -40bp_to_ENSMUST00000006380, NM_001085513, uc008vod.1_5end |
EntrezGene: | Fam131c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.39e-17 | 23 |
neuroblast (sensu Vertebrata) | 2.39e-17 | 23 |
neuron | 1.42e-10 | 33 |
neuronal stem cell | 1.42e-10 | 33 |
neuroblast | 1.42e-10 | 33 |
electrically signaling cell | 1.42e-10 | 33 |
electrically responsive cell | 3.17e-07 | 39 |
electrically active cell | 3.17e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 3.49e-14 | 54 |
neural tube | 7.14e-13 | 52 |
neural rod | 7.14e-13 | 52 |
future spinal cord | 7.14e-13 | 52 |
neural keel | 7.14e-13 | 52 |
central nervous system | 3.98e-12 | 73 |
gray matter | 1.21e-11 | 34 |
nervous system | 2.92e-11 | 75 |
neurectoderm | 6.24e-10 | 64 |
neural plate | 6.24e-10 | 64 |
presumptive neural plate | 6.24e-10 | 64 |
ecto-epithelium | 1.30e-09 | 73 |
ectoderm-derived structure | 1.56e-09 | 95 |
ectoderm | 1.56e-09 | 95 |
presumptive ectoderm | 1.56e-09 | 95 |
brain | 2.38e-09 | 47 |
future brain | 2.38e-09 | 47 |
regional part of brain | 4.55e-09 | 46 |
anterior neural tube | 2.41e-08 | 40 |
brain grey matter | 3.50e-08 | 29 |
regional part of telencephalon | 3.50e-08 | 29 |
telencephalon | 3.50e-08 | 29 |
regional part of forebrain | 7.66e-08 | 39 |
forebrain | 7.66e-08 | 39 |
future forebrain | 7.66e-08 | 39 |
basal ganglion | 7.74e-07 | 8 |
nuclear complex of neuraxis | 7.74e-07 | 8 |
aggregate regional part of brain | 7.74e-07 | 8 |
collection of basal ganglia | 7.74e-07 | 8 |
cerebral subcortex | 7.74e-07 | 8 |