FFCP PHASE1:Hg19::chr14:106916169..106916203,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:106916169..106916203,+ | |||
|description=CAGE_peak_at_chr14:106916169..106916203,+ | |description=CAGE_peak_at_chr14:106916169..106916203,+ | ||
|id=chr14:106916169..106916203,+ | |id=chr14:106916169..106916203,+ | ||
|ontology_enrichment_celltype=CL:0000082!5.65e-13!19;CL:1000415!8.75e-10!2;CL:0000054!9.54e-10!2;CL:0000137!9.54e-10!2;CL:0000092!9.54e-10!2 | |ontology_enrichment_celltype=CL:0000082!5.65e-13!19;CL:1000415!8.75e-10!2;CL:0000054!9.54e-10!2;CL:0000137!9.54e-10!2;CL:0000092!9.54e-10!2 | ||
|ontology_enrichment_celltype_v019=CL:0000082;2.64e-12;19!CL:0000054;2.67e-08;2!CL:0000137;2.67e-08;2!CL:0000092;2.67e-08;2!CL:1000415;2.67e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000082,2.84e-12,19;CL:1000415,2.31e-08,2;CL:0000054,2.48e-08,2;CL:0000137,2.48e-08,2;CL:0000092,2.48e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.79e-08;29!UBERON:0001041;6.97e-08;30 | |||
|ontology_enrichment_disease=DOID:1325!1.23e-21!7;DOID:3904!1.23e-21!7;DOID:5409!4.68e-17!4;DOID:1324!8.68e-17!15;DOID:14566!1.44e-16!239;DOID:162!5.83e-16!235;DOID:0050615!1.18e-15!16;DOID:0050687!2.28e-12!143;DOID:3905!1.10e-11!9;DOID:200!9.54e-10!2;DOID:4305!9.54e-10!2;DOID:0050686!3.39e-09!137;DOID:305!1.37e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:1325;9.30e-33;7!DOID:3904;9.30e-33;7!DOID:4960;1.66e-15;1!DOID:0070004;1.66e-15;1!DOID:1324;1.68e-15;15!DOID:0060085;2.75e-15;1!DOID:3165;2.75e-15;1!DOID:0060121;2.75e-15;1!DOID:2438;2.75e-15;1!DOID:4418;2.75e-15;1!DOID:5409;3.67e-15;4!DOID:3905;6.53e-15;9!DOID:0050615;1.49e-14;16!DOID:3910;1.39e-08;2!DOID:200;2.67e-08;2!DOID:4305;2.67e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1325,1.14e-32,7;DOID:3904,1.14e-32,7;DOID:4960,1.54e-15,1;DOID:0070004,1.54e-15,1;DOID:1324,1.84e-15,15;DOID:0060085,2.38e-15,1;DOID:3165,2.38e-15,1;DOID:0060121,2.38e-15,1;DOID:2438,2.38e-15,1;DOID:4418,2.38e-15,1;DOID:5409,4.23e-15,4;DOID:3905,7.18e-15,9;DOID:0050615,1.62e-14,16;DOID:3910,1.39e-08,2;DOID:200,2.48e-08,2;DOID:4305,2.48e-08,2;DOID:0050687,3.56e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0004802!5.65e-13!19;UBERON:0000115!5.65e-13!19;UBERON:0002048!5.03e-11!22;UBERON:0000117!5.03e-11!22;UBERON:0000171!5.03e-11!22;UBERON:0000170!5.03e-11!22;UBERON:0005597!5.03e-11!22;UBERON:0000118!5.03e-11!22;UBERON:0004807!2.21e-08!28;UBERON:0005178!2.35e-08!34;UBERON:0002224!2.35e-08!34;UBERON:0005181!4.51e-08!35;UBERON:0008947!2.27e-07!38;UBERON:0003258!2.27e-07!38;UBERON:0002110!8.85e-07!3;UBERON:0006242!8.85e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;2.75e-15;1!UBERON:0004802;2.64e-12;19!UBERON:0000115;2.64e-12;19!UBERON:0002371;3.93e-11;12!UBERON:0002048;1.15e-10;22!UBERON:0004807;1.15e-10;22!UBERON:0000117;1.15e-10;22!UBERON:0000171;1.15e-10;22!UBERON:0000170;1.15e-10;22!UBERON:0004903;1.39e-08;2!UBERON:0002173;1.39e-08;2!UBERON:0002186;1.39e-08;2!UBERON:0001474;1.32e-07;18!UBERON:0005911;5.73e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,3.17e-15,1;UBERON:0004802,2.84e-12,19;UBERON:0000115,2.84e-12,19;UBERON:0002048,1.23e-10,22;UBERON:0000117,1.23e-10,22;UBERON:0000171,1.23e-10,22;UBERON:0000170,1.23e-10,22;UBERON:0005597,1.23e-10,22;UBERON:0000118,1.23e-10,22;UBERON:0004903,1.39e-08,2;UBERON:0002173,1.39e-08,2;UBERON:0002186,1.39e-08,2;UBERON:0004807,2.07e-08,28;UBERON:0005178,5.81e-07,34;UBERON:0002224,5.81e-07,34;UBERON:0005181,9.08e-07,35 | |||
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| ||
|short_description=p@chr14:106916169..106916203,+ | |short_description=p@chr14:106916169..106916203,+ | ||
}} | }} |
Latest revision as of 18:45, 24 July 2015
Short description: | p@chr14:106916169..106916203, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:106916169..106916203, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of lung | 2.84e-12 | 19 |
epithelial cell of gall bladder | 2.31e-08 | 2 |
bone matrix secreting cell | 2.48e-08 | 2 |
osteocyte | 2.48e-08 | 2 |
osteoclast | 2.48e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 3.17e-15 | 1 |
respiratory tract epithelium | 2.84e-12 | 19 |
lung epithelium | 2.84e-12 | 19 |
lung | 1.23e-10 | 22 |
respiratory tube | 1.23e-10 | 22 |
respiration organ | 1.23e-10 | 22 |
pair of lungs | 1.23e-10 | 22 |
lung primordium | 1.23e-10 | 22 |
lung bud | 1.23e-10 | 22 |
bronchoalveolar duct junction | 1.39e-08 | 2 |
alveolar duct | 1.39e-08 | 2 |
bronchiole | 1.39e-08 | 2 |
respiratory system epithelium | 2.07e-08 | 28 |
thoracic cavity element | 5.81e-07 | 34 |
thoracic cavity | 5.81e-07 | 34 |
thoracic segment organ | 9.08e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
bronchus cancer | 1.14e-32 | 7 |
bronchogenic carcinoma | 1.14e-32 | 7 |
bone marrow cancer | 1.54e-15 | 1 |
myeloma | 1.54e-15 | 1 |
lung cancer | 1.84e-15 | 15 |
organ system benign neoplasm | 2.38e-15 | 1 |
skin benign neoplasm | 2.38e-15 | 1 |
integumentary system benign neoplasm | 2.38e-15 | 1 |
dermis tumor | 2.38e-15 | 1 |
cutaneous fibrous histiocytoma | 2.38e-15 | 1 |
lung small cell carcinoma | 4.23e-15 | 4 |
lung carcinoma | 7.18e-15 | 9 |
respiratory system cancer | 1.62e-14 | 16 |
lung adenocarcinoma | 1.39e-08 | 2 |
giant cell tumor | 2.48e-08 | 2 |
bone giant cell tumor | 2.48e-08 | 2 |
cell type cancer | 3.56e-07 | 143 |