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FFCP PHASE1:Mm9::chr6:104443155..104443210,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=53870
|EntrezGene=53870
|HGNC=
|HGNC=
|MCL_coexpression_id=39
|TSSclassifier=NA
|UniProt=Q9JMB8
|UniProt=Q9JMB8
|association_with_transcript=-31bp_to_ENSMUST00000162872_5end
|association_with_transcript=-31bp_to_ENSMUST00000162872_5end
|cluster_id=chr6:104443155..104443210,+
|description=CAGE_peak_1_at_Cntn6_5end
|description=CAGE_peak_1_at_Cntn6_5end
|id=chr6:104443155..104443210,+
|id=chr6:104443155..104443210,+
|ontology_enrichment_celltype=CL:0000540!1.14e-10!33;CL:0000047!1.14e-10!33;CL:0000031!1.14e-10!33;CL:0000404!1.14e-10!33;CL:0000393!3.14e-07!39;CL:0000211!3.14e-07!39
|ontology_enrichment_celltype=CL:0000540!1.14e-10!33;CL:0000047!1.14e-10!33;CL:0000031!1.14e-10!33;CL:0000404!1.14e-10!33;CL:0000393!3.14e-07!39;CL:0000211!3.14e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000540,9.44e-10,33;CL:0000047,9.44e-10,33;CL:0000031,9.44e-10,33;CL:0000404,9.44e-10,33;CL:0000393,2.53e-07,39;CL:0000211,2.53e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!7.97e-19!73;UBERON:0005743!7.97e-19!73;UBERON:0004121!1.28e-18!102;UBERON:0000924!1.28e-18!102;UBERON:0006601!1.28e-18!102;UBERON:0002346!2.05e-18!71;UBERON:0003075!2.05e-18!71;UBERON:0007284!2.05e-18!71;UBERON:0000073!1.29e-17!75;UBERON:0001016!1.29e-17!75;UBERON:0000033!2.60e-17!63;UBERON:0003056!1.34e-14!49;UBERON:0001049!1.26e-13!52;UBERON:0005068!1.26e-13!52;UBERON:0006241!1.26e-13!52;UBERON:0007135!1.26e-13!52;UBERON:0000955!1.28e-12!50;UBERON:0006238!1.28e-12!50;UBERON:0002616!3.88e-12!49;UBERON:0002020!7.19e-11!34;UBERON:0003080!2.76e-09!40;UBERON:0002780!1.05e-08!39;UBERON:0001890!1.05e-08!39;UBERON:0006240!1.05e-08!39;UBERON:0002791!2.00e-08!29;UBERON:0003528!2.00e-08!29;UBERON:0001893!2.00e-08!29;UBERON:0002021!2.89e-08!10;UBERON:0000411!2.89e-08!10;UBERON:0001950!2.89e-08!10;UBERON:0007811!3.54e-08!86;UBERON:0000970!2.57e-07!9;UBERON:0000019!2.57e-07!9;UBERON:0000047!2.57e-07!9;UBERON:0004088!2.57e-07!9;UBERON:0002104!2.57e-07!9;UBERON:0001456!2.57e-07!9;UBERON:0003072!2.57e-07!9;UBERON:0003071!2.57e-07!9;UBERON:0004128!2.57e-07!9;UBERON:0000153!3.30e-07!94
|ontology_enrichment_uberon=UBERON:0001017!7.97e-19!73;UBERON:0005743!7.97e-19!73;UBERON:0004121!1.28e-18!102;UBERON:0000924!1.28e-18!102;UBERON:0006601!1.28e-18!102;UBERON:0002346!2.05e-18!71;UBERON:0003075!2.05e-18!71;UBERON:0007284!2.05e-18!71;UBERON:0000073!1.29e-17!75;UBERON:0001016!1.29e-17!75;UBERON:0000033!2.60e-17!63;UBERON:0003056!1.34e-14!49;UBERON:0001049!1.26e-13!52;UBERON:0005068!1.26e-13!52;UBERON:0006241!1.26e-13!52;UBERON:0007135!1.26e-13!52;UBERON:0000955!1.28e-12!50;UBERON:0006238!1.28e-12!50;UBERON:0002616!3.88e-12!49;UBERON:0002020!7.19e-11!34;UBERON:0003080!2.76e-09!40;UBERON:0002780!1.05e-08!39;UBERON:0001890!1.05e-08!39;UBERON:0006240!1.05e-08!39;UBERON:0002791!2.00e-08!29;UBERON:0003528!2.00e-08!29;UBERON:0001893!2.00e-08!29;UBERON:0002021!2.89e-08!10;UBERON:0000411!2.89e-08!10;UBERON:0001950!2.89e-08!10;UBERON:0007811!3.54e-08!86;UBERON:0000970!2.57e-07!9;UBERON:0000019!2.57e-07!9;UBERON:0000047!2.57e-07!9;UBERON:0004088!2.57e-07!9;UBERON:0002104!2.57e-07!9;UBERON:0001456!2.57e-07!9;UBERON:0003072!2.57e-07!9;UBERON:0003071!2.57e-07!9;UBERON:0004128!2.57e-07!9;UBERON:0000153!3.30e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.01e-26,64;UBERON:0003075,1.01e-26,64;UBERON:0007284,1.01e-26,64;UBERON:0004121,5.63e-23,95;UBERON:0000924,5.63e-23,95;UBERON:0006601,5.63e-23,95;UBERON:0001017,1.06e-21,73;UBERON:0010371,1.44e-21,73;UBERON:0001016,1.01e-20,75;UBERON:0000073,3.39e-18,54;UBERON:0001049,1.11e-16,52;UBERON:0005068,1.11e-16,52;UBERON:0006241,1.11e-16,52;UBERON:0007135,1.11e-16,52;UBERON:0003056,2.37e-16,49;UBERON:0010314,3.99e-14,92;UBERON:0002020,8.12e-14,34;UBERON:0000955,6.24e-13,47;UBERON:0006238,6.24e-13,47;UBERON:0002616,2.86e-12,46;UBERON:0002021,5.49e-12,10;UBERON:0000411,5.49e-12,10;UBERON:0001950,5.49e-12,10;UBERON:0003528,3.31e-10,29;UBERON:0002791,3.31e-10,29;UBERON:0001893,3.31e-10,29;UBERON:0003080,7.65e-10,40;UBERON:0002780,4.63e-09,39;UBERON:0001890,4.63e-09,39;UBERON:0006240,4.63e-09,39;UBERON:0000970,5.65e-09,9;UBERON:0000019,5.65e-09,9;UBERON:0000047,5.65e-09,9;UBERON:0010312,5.65e-09,9;UBERON:0004088,5.65e-09,9;UBERON:0002104,5.65e-09,9;UBERON:0001456,5.65e-09,9;UBERON:0003072,5.65e-09,9;UBERON:0004128,5.65e-09,9;UBERON:0003071,5.65e-09,9;UBERON:0003076,1.48e-08,12;UBERON:0003057,1.48e-08,12;UBERON:0002619,4.70e-07,17;UBERON:0001444,6.26e-07,11
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,3.1739458756322,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0,1.42825492201902,2.87129103237098,0.489963196859816,0,0,4.40463523997555,3.19218345212969,4.91540906419979,0.923204014111357,2.56165402086747,4.16730696445408,2.23346399201105,4.50210088025344,3.36156145108982,5.30331453852602,9.25415925194169,1.67759501242771,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0.704217098883403,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0.461230994512117,0.150722640552623,0,0,0,0.144599356919912,0,0,0,0,0,35.4264764383972,33.3020263833394,0,0,0,0,8.53806644607489,2.28750301409313,1.25654352112864,5.04090528557602,4.09144731728529,5.81806524766768,3.40706652442291,1.42575109390443,0,0,0.841767423545896,12.1012011955314,7.12696523743766,11.1638520479317,11.1521565198429,11.6342413548771,11.0177799444971,8.90166383317424,4.13925393182425,0,0.189106080167819,0.175951124163949,0.43839146485515,0,0,0.205782136407943,0.995171334092466,0,0,0,0,0.234526059981096,0.36012412292203,0.473489471170421,0.196764231747404,0,0.232533944750408,0,0,0,0,0,0,0,0,2.94405927989778,0.720332286654991,0,0,1.2797295032114,0.696710015581316,1.28867461322093,0.201683524623343,0,0,0,0,0.251335208800269,0,0.38992817423824,0,0,0,0.758671603812327,1.5994791765362,1.1270773567308,1.22190796707189,0.193952487167626,0.420814919341911,0.442655759869801,0,0,0,0,0.333690211432188,0,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0,0,0,0.37898282354097,0.325929952884052,0,0.234690248288502,0.167506257441816,0,0,0.315270288212382,0.221464689648775,0.318909537314974,0,0,0,0,0,0,0,5.13761887960934,5.86058432961016,0,0,3.15508219416257,2.73307121007647,7.32439552291516,6.4521575447189,9.35754431146055,7.35998980050964,1.21443210502468,0.584511715822624,0.790575555893047,2.57057053137446,0.141940085208269,1.24645922567079,0.81443479676788,0.164970122972535,0,0,0,0.188605079755898,0,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0,3.6012218806262,0.129358683782755,0.214337035031592,0.532020700926821,0.178368817602071,0.329098041204242,0,0,0,0,0,0.807322133479528,0.241251699712623,0.358117032009409,0.164140899745061,0,7.6024373824309,0,0.206386867963223,0.740778109478847,0,0,0,0,0,0,0,0.316335993581135,0.609958401380546,0.432021363287205,0.209088296014469,0,0.539457385539283,0.165306911450672,0,0.129614973291793,0,0,1.64468200648377,2.31641886639937,1.55560950675238,1.42075805825504,0.675824501963113,0.821500670520278,0.13020438484395,0,0,0,0,0.405450430580328,0,0.129920822977795,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.8130515932779,12.4287813856938,14.8952833494243,9.6237782112465,4.7955776383945,6.7985450765073,8.10027000278167,4.05289082901798,4.07828168085784,5.69536342927002,0.31136204275253,1.59609949360412,1.87806966329548,2.18796045361465,0.838452650511929,0.367687016900028,1.55572709461131,1.64828045791115,0.64183841918363,1.76888048234658,1.77435509923168,1.88626341386076,1.40462261204824,1.15245274328765,1.49332219284595,0.952587382566147,1.15884325944855,0.77163688185482,2.06042950401653,0.735994600671987,0.342869252385415,0.887379030796687,1.1921809497366,1.30811774969096,2.1645157495526,1.94613598150856,0.365855945745545,1.57841826862706,0.950628796921032,1.12228454331548,1.42362021749009,1.37906275325789,2.45538625901814,1.70430525304563,0.964533054905707,1.74867404556562,0.701794825336225,0.859484216193193,0.765153328275374,0.441182838239031,0.231867835620421
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,3.1739458756322,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0,1.42825492201902,2.87129103237098,0.489963196859816,0,0,4.40463523997555,3.19218345212969,4.91540906419979,0.923204014111357,2.56165402086747,4.16730696445408,2.23346399201105,4.50210088025344,3.36156145108982,5.30331453852602,9.25415925194169,1.67759501242771,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0.704217098883403,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0.461230994512117,0.150722640552623,0,0,0,0.144599356919912,0,0,0,0,0,35.4264764383972,33.3020263833394,0,0,0,0,8.53806644607489,2.28750301409313,1.25654352112864,5.04090528557602,4.09144731728529,5.81806524766768,3.40706652442291,1.42575109390443,0,0,0.841767423545896,12.1012011955314,7.12696523743766,11.1638520479317,11.1521565198429,11.6342413548771,11.0177799444971,8.90166383317424,4.13925393182425,0,0.189106080167819,0.175951124163949,0.43839146485515,0,0,0.205782136407943,0.995171334092466,0,0,0,0,0.234526059981096,0.36012412292203,0.473489471170421,0.196764231747404,0,0.232533944750408,0,0,0,0,0,0,0,0,2.94405927989778,0.720332286654991,0,0,1.2797295032114,0.696710015581316,1.28867461322093,0.201683524623343,0,0,0,0,0.251335208800269,0,0.38992817423824,0,0,0,0.758671603812327,1.5994791765362,1.1270773567308,1.22190796707189,0.193952487167626,0.420814919341911,0.442655759869801,0,0,0,0,0.333690211432188,0,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0,0,0,0.37898282354097,0.325929952884052,0,0.234690248288502,0.167506257441816,0,0,0.315270288212382,0.221464689648775,0.318909537314974,0,0,0,0,0,0,0,5.13761887960934,5.86058432961016,0,0,3.15508219416257,2.73307121007647,7.32439552291516,6.4521575447189,9.35754431146055,7.35998980050964,1.21443210502468,0.584511715822624,0.790575555893047,2.57057053137446,0.141940085208269,1.24645922567079,0.81443479676788,0.164970122972535,0,0,0,0.188605079755898,0,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0,3.6012218806262,0.129358683782755,0.214337035031592,0.532020700926821,0.178368817602071,0.329098041204242,0,0,0,0,0,0.807322133479528,0.241251699712623,0.358117032009409,0.164140899745061,0,7.6024373824309,0,0.206386867963223,0.740778109478847,0,0,0,0,0,0,0,0.316335993581135,0.609958401380546,0.432021363287205,0.209088296014469,0,0.539457385539283,0.165306911450672,0,0.129614973291793,0,0,1.64468200648377,2.31641886639937,1.55560950675238,1.42075805825504,0.675824501963113,0.821500670520278,0.13020438484395,0,0,0,0,0.405450430580328,0,0.129920822977795,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.8130515932779,12.4287813856938,14.8952833494243,9.6237782112465,4.7955776383945,6.7985450765073,8.10027000278167,4.05289082901798,4.07828168085784,5.69536342927002,0.31136204275253,1.59609949360412,1.87806966329548,2.18796045361465,0.838452650511929,0.367687016900028,1.55572709461131,1.64828045791115,0.64183841918363,1.76888048234658,1.77435509923168,1.88626341386076,1.40462261204824,1.15245274328765,1.49332219284595,0.952587382566147,1.15884325944855,0.77163688185482,2.06042950401653,0.735994600671987,0.342869252385415,0.887379030796687,1.1921809497366,1.30811774969096,2.1645157495526,1.94613598150856,0.365855945745545,1.57841826862706,0.950628796921032,1.12228454331548,1.42362021749009,1.37906275325789,2.45538625901814,1.70430525304563,0.964533054905707,1.74867404556562,0.701794825336225,0.859484216193193,0.765153328275374,0.441182838239031,0.231867835620421
|short_description=p1@Cntn6
|short_description=p1@Cntn6
}}
}}

Latest revision as of 10:30, 26 September 2015

Short description:p1@Cntn6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Cntn6_5end
Coexpression cluster:MCL_coexpression_mm9:39
Association with transcript: -31bp_to_ENSMUST00000162872_5end
EntrezGene:Cntn6
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Cntn6

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.19
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.36
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.30
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F69.25
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.68
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B235.43
cerebellum, neonate N30.CNhs11135.1395-42I233.30
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A48.54
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F11.26
cortex, adult.CNhs10473.12-14D55.04
cortex, neonate N30.CNhs11107.1392-42F24.09
diencephalon, adult.CNhs10482.20-12F25.82
diencephalon, neonate N30.CNhs11201.1388-42B23.41
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.43
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C612.10
eyeball, embryo E14.CNhs10521.399-16E27.13
eyeball, embryo E15.CNhs10593.426-16C911.16
eyeball, embryo E17.CNhs11023.1261-18D411.15
eyeball, neonate N00.CNhs11207.633-15C611.63
eyeball, neonate N01.CNhs11140.1532-43E711.02
eyeball, neonate N02.CNhs11205.1551-44G88.90
eyeball, neonate N16.CNhs11188.777-19A24.14
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E82.94
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D81.29
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F81.60
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C25.14
medulla oblongata, neonate N30.CNhs11200.1396-42A35.86
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.16
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.32
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D76.45
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D89.36
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D97.36
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E63.60
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C97.60
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.64
testis, embryo E15.CNhs11034.443-27C52.32
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I51.42
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A115.81
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A212.43
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A314.90
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.62
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.70
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.88
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.16
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron9.44e-1033
neuronal stem cell9.44e-1033
neuroblast9.44e-1033
electrically signaling cell9.44e-1033
electrically responsive cell2.53e-0739
electrically active cell2.53e-0739

Uber anatomy
Ontology termp-valuen
neurectoderm1.01e-2664
neural plate1.01e-2664
presumptive neural plate1.01e-2664
ectoderm-derived structure5.63e-2395
ectoderm5.63e-2395
presumptive ectoderm5.63e-2395
central nervous system1.06e-2173
ecto-epithelium1.44e-2173
nervous system1.01e-2075
regional part of nervous system3.39e-1854
neural tube1.11e-1652
neural rod1.11e-1652
future spinal cord1.11e-1652
neural keel1.11e-1652
pre-chordal neural plate2.37e-1649
structure with developmental contribution from neural crest3.99e-1492
gray matter8.12e-1434
brain6.24e-1347
future brain6.24e-1347
regional part of brain2.86e-1246
occipital lobe5.49e-1210
visual cortex5.49e-1210
neocortex5.49e-1210
brain grey matter3.31e-1029
regional part of telencephalon3.31e-1029
telencephalon3.31e-1029
anterior neural tube7.65e-1040
regional part of forebrain4.63e-0939
forebrain4.63e-0939
future forebrain4.63e-0939
eye5.65e-099
camera-type eye5.65e-099
simple eye5.65e-099
immature eye5.65e-099
ocular region5.65e-099
visual system5.65e-099
face5.65e-099
optic cup5.65e-099
optic vesicle5.65e-099
eye primordium5.65e-099
posterior neural tube1.48e-0812
chordal neural plate1.48e-0812
regional part of cerebral cortex4.70e-0717
subdivision of head6.26e-0711
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