FFCP PHASE1:Hg19::chr11:105948366..105948416,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=60496 | |EntrezGene=60496 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14235 | |HGNC=14235 | ||
|TSSclassifier=strong | |||
|UniProt=B4DDW7 | |UniProt=B4DDW7 | ||
|association_with_transcript=0bp_to_ENST00000525660_5end | |association_with_transcript=0bp_to_ENST00000525660_5end | ||
|cluster_id=chr11:105948366..105948416,+ | |||
|description=CAGE_peak_1_at_AASDHPPT_5end | |description=CAGE_peak_1_at_AASDHPPT_5end | ||
|id=chr11:105948366..105948416,+ | |id=chr11:105948366..105948416,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.20e-13!239;DOID:162!1.84e-13!235;DOID:0050687!2.30e-08!143;DOID:2531!1.80e-07!51;DOID:0060083!1.80e-07!51 | |ontology_enrichment_disease=DOID:14566!1.20e-13!239;DOID:162!1.84e-13!235;DOID:0050687!2.30e-08!143;DOID:2531!1.80e-07!51;DOID:0060083!1.80e-07!51 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,1.20e-13,239;DOID:162,1.84e-13,235;DOID:0050687,2.30e-08,143;DOID:2531,1.80e-07,51;DOID:0060083,1.80e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0000073!8.21e-21!94;UBERON:0001016!8.21e-21!94;UBERON:0001017!8.44e-18!82;UBERON:0002780!1.46e-17!41;UBERON:0001890!1.46e-17!41;UBERON:0006240!1.46e-17!41;UBERON:0005743!2.51e-17!86;UBERON:0003080!5.88e-17!42;UBERON:0001049!1.96e-16!57;UBERON:0005068!1.96e-16!57;UBERON:0006241!1.96e-16!57;UBERON:0007135!1.96e-16!57;UBERON:0000955!3.13e-16!69;UBERON:0006238!3.13e-16!69;UBERON:0000924!9.57e-16!173;UBERON:0006601!9.57e-16!173;UBERON:0002616!3.04e-15!59;UBERON:0001869!4.78e-15!32;UBERON:0001893!5.43e-15!34;UBERON:0004121!1.39e-14!169;UBERON:0002020!1.56e-14!34;UBERON:0003528!1.56e-14!34;UBERON:0002791!2.25e-14!33;UBERON:0000033!6.36e-13!123;UBERON:0002346!1.84e-12!90;UBERON:0000153!1.95e-12!129;UBERON:0007811!1.95e-12!129;UBERON:0000956!3.76e-12!25;UBERON:0000203!3.76e-12!25;UBERON:0003056!4.55e-12!61;UBERON:0002619!8.50e-12!22;UBERON:0003075!2.95e-11!86;UBERON:0007284!2.95e-11!86;UBERON:0001950!4.04e-11!20 | |ontology_enrichment_uberon=UBERON:0000073!8.21e-21!94;UBERON:0001016!8.21e-21!94;UBERON:0001017!8.44e-18!82;UBERON:0002780!1.46e-17!41;UBERON:0001890!1.46e-17!41;UBERON:0006240!1.46e-17!41;UBERON:0005743!2.51e-17!86;UBERON:0003080!5.88e-17!42;UBERON:0001049!1.96e-16!57;UBERON:0005068!1.96e-16!57;UBERON:0006241!1.96e-16!57;UBERON:0007135!1.96e-16!57;UBERON:0000955!3.13e-16!69;UBERON:0006238!3.13e-16!69;UBERON:0000924!9.57e-16!173;UBERON:0006601!9.57e-16!173;UBERON:0002616!3.04e-15!59;UBERON:0001869!4.78e-15!32;UBERON:0001893!5.43e-15!34;UBERON:0004121!1.39e-14!169;UBERON:0002020!1.56e-14!34;UBERON:0003528!1.56e-14!34;UBERON:0002791!2.25e-14!33;UBERON:0000033!6.36e-13!123;UBERON:0002346!1.84e-12!90;UBERON:0000153!1.95e-12!129;UBERON:0007811!1.95e-12!129;UBERON:0000956!3.76e-12!25;UBERON:0000203!3.76e-12!25;UBERON:0003056!4.55e-12!61;UBERON:0002619!8.50e-12!22;UBERON:0003075!2.95e-11!86;UBERON:0007284!2.95e-11!86;UBERON:0001950!4.04e-11!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.19e-13;32!UBERON:0001893;3.23e-13;34!UBERON:0002791;3.87e-13;32!UBERON:0003528;5.73e-13;34!UBERON:0002020;5.73e-13;34!UBERON:0002780;1.74e-12;41!UBERON:0001890;1.74e-12;41!UBERON:0000956;3.78e-12;25!UBERON:0000203;3.78e-12;25!UBERON:0002619;8.65e-12;22!UBERON:0001950;4.15e-11;20!UBERON:0000073;5.78e-10;53!UBERON:0002616;5.78e-10;53!UBERON:0000955;4.41e-09;68!UBERON:0001017;6.45e-09;75!UBERON:0001016;8.17e-09;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.00e-21,89;UBERON:0001017,3.62e-18,81;UBERON:0002780,1.46e-17,41;UBERON:0001890,1.46e-17,41;UBERON:0003080,1.46e-17,41;UBERON:0006240,1.46e-17,41;UBERON:0001049,6.77e-17,56;UBERON:0005068,6.77e-17,56;UBERON:0006241,6.77e-17,56;UBERON:0007135,6.77e-17,56;UBERON:0000955,1.28e-16,68;UBERON:0006238,1.28e-16,68;UBERON:0000073,2.35e-16,53;UBERON:0002616,2.35e-16,53;UBERON:0004121,1.46e-15,171;UBERON:0000924,1.46e-15,171;UBERON:0006601,1.46e-15,171;UBERON:0011216,4.27e-15,223;UBERON:0001869,4.78e-15,32;UBERON:0001893,5.43e-15,34;UBERON:0003528,1.56e-14,34;UBERON:0002020,1.56e-14,34;UBERON:0002791,2.09e-14,32;UBERON:0002346,4.69e-13,86;UBERON:0003056,8.21e-13,61;UBERON:0000956,3.76e-12,25;UBERON:0000203,3.76e-12,25;UBERON:0003075,8.11e-12,82;UBERON:0007284,8.11e-12,82;UBERON:0002619,8.50e-12,22;UBERON:0010371,1.24e-11,104;UBERON:0001950,4.04e-11,20;UBERON:0010314,1.96e-09,132 | |||
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| ||
|short_description=p1@AASDHPPT | |short_description=p1@AASDHPPT | ||
}} | }} |
Latest revision as of 21:42, 24 September 2015
Short description: | p1@AASDHPPT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AASDHPPT_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000525660_5end |
EntrezGene: | AASDHPPT |
HGNC: | 14235 |
UniProt: | B4DDW7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 1.00e-21 | 89 |
central nervous system | 3.62e-18 | 81 |
regional part of forebrain | 1.46e-17 | 41 |
forebrain | 1.46e-17 | 41 |
anterior neural tube | 1.46e-17 | 41 |
future forebrain | 1.46e-17 | 41 |
neural tube | 6.77e-17 | 56 |
neural rod | 6.77e-17 | 56 |
future spinal cord | 6.77e-17 | 56 |
neural keel | 6.77e-17 | 56 |
brain | 1.28e-16 | 68 |
future brain | 1.28e-16 | 68 |
regional part of nervous system | 2.35e-16 | 53 |
regional part of brain | 2.35e-16 | 53 |
ectoderm-derived structure | 1.46e-15 | 171 |
ectoderm | 1.46e-15 | 171 |
presumptive ectoderm | 1.46e-15 | 171 |
organ system subdivision | 4.27e-15 | 223 |
cerebral hemisphere | 4.78e-15 | 32 |
telencephalon | 5.43e-15 | 34 |
brain grey matter | 1.56e-14 | 34 |
gray matter | 1.56e-14 | 34 |
regional part of telencephalon | 2.09e-14 | 32 |
neurectoderm | 4.69e-13 | 86 |
pre-chordal neural plate | 8.21e-13 | 61 |
cerebral cortex | 3.76e-12 | 25 |
pallium | 3.76e-12 | 25 |
neural plate | 8.11e-12 | 82 |
presumptive neural plate | 8.11e-12 | 82 |
regional part of cerebral cortex | 8.50e-12 | 22 |
ecto-epithelium | 1.24e-11 | 104 |
neocortex | 4.04e-11 | 20 |
structure with developmental contribution from neural crest | 1.96e-09 | 132 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 1.20e-13 | 239 |
cancer | 1.84e-13 | 235 |
cell type cancer | 2.30e-08 | 143 |
hematologic cancer | 1.80e-07 | 51 |
immune system cancer | 1.80e-07 | 51 |