FFCP PHASE1:Hg19::chr10:32667648..32667659,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:32667648..32667659,-
|short_description=p5@EPC1
|description=CAGE_peak_5_at_EPC1_5end
|association_with_transcript=7bp_to_uc001iwi.3,uc009xlt.2_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80314 | |EntrezGene=80314 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19876 | |HGNC=19876 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=7bp_to_uc001iwi.3,uc009xlt.2_5end | |||
|cluster_id=chr10:32667648..32667659,- | |||
|coexpression_cluster_id=C1115 | |||
|description=CAGE_peak_5_at_EPC1_5end | |||
|id=chr10:32667648..32667659,- | |||
|ontology_enrichment_celltype=CL:0000738!3.78e-15!140;CL:0000037!2.24e-12!172;CL:0000566!2.24e-12!172;CL:0000542!1.03e-11!53;CL:0000051!1.03e-11!53;CL:0000838!1.07e-11!52;CL:0000988!1.51e-11!182;CL:0000791!3.79e-11!18;CL:0000789!3.79e-11!18;CL:0002420!3.79e-11!18;CL:0002419!3.79e-11!18;CL:0000790!3.79e-11!18;CL:0002031!4.95e-11!124;CL:0002087!2.21e-10!119;CL:0002032!3.84e-10!165;CL:0000837!3.84e-10!165;CL:0000084!1.02e-08!25;CL:0000827!1.02e-08!25;CL:0000625!3.58e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;9.75e-18;18!CL:0000789;9.75e-18;18!CL:0002419;9.75e-18;18!CL:0000625;1.13e-12;11!CL:0000084;2.00e-12;25!CL:0000542;1.18e-09;53!CL:0000624;3.95e-08;6!CL:0000236;3.26e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,9.26e-18,18;CL:0000789,9.26e-18,18;CL:0002420,9.26e-18,18;CL:0002419,9.26e-18,18;CL:0000790,9.26e-18,18;CL:0000738,2.25e-16,136;CL:0000838,6.28e-15,52;CL:0000542,1.97e-14,53;CL:0000051,1.97e-14,53;CL:0000625,1.11e-12,11;CL:0000037,1.86e-12,168;CL:0000084,2.02e-12,25;CL:0000827,2.02e-12,25;CL:0000988,7.04e-12,177;CL:0002031,1.21e-11,120;CL:0002087,1.89e-11,115;CL:0002032,1.77e-09,161;CL:0000837,1.77e-09,161;CL:0000624,3.80e-08,6;CL:0002393,8.50e-08,9;CL:0002397,8.50e-08,9 | |||
|ontology_enrichment_development_v019=CL:0000790;9.75e-18;18!CL:0000051;1.18e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.97e-13!115;UBERON:0001049!5.20e-12!57;UBERON:0005068!5.20e-12!57;UBERON:0006241!5.20e-12!57;UBERON:0007135!5.20e-12!57;UBERON:0000073!1.15e-11!94;UBERON:0001016!1.15e-11!94;UBERON:0001017!2.21e-11!82;UBERON:0005743!1.11e-10!86;UBERON:0002780!5.05e-10!41;UBERON:0001890!5.05e-10!41;UBERON:0006240!5.05e-10!41;UBERON:0002616!9.27e-10!59;UBERON:0003080!2.32e-09!42;UBERON:0000955!4.11e-09!69;UBERON:0006238!4.11e-09!69;UBERON:0001893!7.42e-08!34;UBERON:0002020!9.44e-08!34;UBERON:0003528!9.44e-08!34;UBERON:0002791!1.26e-07!33;UBERON:0001869!1.93e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;3.52e-07;53!UBERON:0002616;3.52e-07;53!UBERON:0002780;6.66e-07;41!UBERON:0001890;6.66e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.20e-11,56;UBERON:0005068,4.20e-11,56;UBERON:0006241,4.20e-11,56;UBERON:0007135,4.20e-11,56;UBERON:0001016,6.01e-11,89;UBERON:0000073,1.71e-10,53;UBERON:0002616,1.71e-10,53;UBERON:0001017,2.97e-10,81;UBERON:0002780,9.28e-09,41;UBERON:0001890,9.28e-09,41;UBERON:0003080,9.28e-09,41;UBERON:0006240,9.28e-09,41;UBERON:0000955,7.95e-08,68;UBERON:0006238,7.95e-08,68;UBERON:0002346,6.72e-07,86 | |||
|phase1_expression=0.908391896352783,0.214100523890983,1.40954404095971,2.00146596706261,0,0,0,0,0.261185628199839,0.245733936501509,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0.738726348460727,0.408001382488506,0.313454721478088,1.14494394852423,1.36874425072884,0.376627918784408,0.305653622991805,0.410502947249729,0.236132343941038,2.36018566109342,11.8987113410136,1.70297735647684,0,0,0,1.16200800870452,0.426507697462265,1.17440175733939,3.87796785972314,3.81034450193269,3.47217393145363,1.11957737119962,1.94336199611388,1.54545340580512,0.290796477559129,0.377875943688809,0.727752183563449,0,0,1.23882548358041,0.28769239232215,0,0.236482229888585,0.344745680736619,0,0,0.376484679085209,0.818718450173537,0.224723484445085,0,0.641858054152187,0.639337125799041,0.329851300186716,0.797854630486527,0.426224750532694,0.580418477257168,0.56738522469114,0,0,0.521482918420201,0.65156653411535,0,0.368277635987565,1.26584954976354,1.69004229049553,1.27562579979026,1.46761051855863,1.46027220490444,1.35159203557356,2.25015821375912,2.85012743741249,1.19350006319454,1.64397738388171,0,4.36910889009705,0,3.84057200309856,4.40435585739614,6.32227683949932,4.62731410949403,6.67837628174755,1.1384259382189,3.52342313622563,4.20500550937752,14.5388461436928,12.8916969485753,0.790152254325231,8.85193965512249,7.46720449223413,8.01845846098086,1.17030546773475,6.51844533267181,8.04861269749047,1.94826728407911,2.00538822393312,6.77593587192126,9.30442357251209,11.6445661418957,1.28091319725675,1.56071217071854,2.30213066445147,2.76350017785848,2.02862160014537,5.78317596332036,6.68852070224283,2.09071047609954,1.92625882585863,6.89796888483458,6.8725489096526,10.1207876807801,6.68987370080603,3.90650072313851,7.60361635558699,5.57127940587759,6.52731716887534,3.74792179657038,7.10331756132051,2.46338399076314,6.8546292696409,6.15112450302067,7.09639579025715,0,1.34140171940727,0.12786256184353,0.361439152384566,0,0.144846518960824,3.1811437882044,0,0.945348171640679,0.221729397462564,0.790513071238134,0.327447688744282,0,0,0,0,0.398873881556595,7.63169997777094,6.29194401858141,5.57186251994347,0.596287222100115,0.860234595106124,0.347140501607594,0,1.25849830862972,0.275118041940067,0,0.775250277507987,0,0.33472061276467,0.402829317109147,0.760272105718513,0.24406205754817,0,0,0.625098097988558,0.44905874525234,0.112611480483322,0,0,0,1.31780417436063,3.87780264148325,0,0,0.12663051166458,0.662045904066094,0.286836620748814,0,0.560677600142307,1.06748995729705,0.24666754841716,0.933633106199299,0.404132016209064,0,0.151357427644931,0,0.234321431833797,0,0.570471821544449,0.149448680551801,0.587172493218824,0.485618833104395,0,0.204154171254893,0.122834317311768,0.309977343527296,0,0,0,0,0.336672227908132,0.625592599359821,0,0,0.919463387397059,0.45071417671979,0.226864366320042,0.538168907066586,0.427114777637135,0.423863802319124,1.20036438433761,0.309157587715317,0.772921620136887,0.37223371266318,1.18143432568886,0.876933046450788,1.00973509697646,1.01254888506529,0.323292113637624,2.4850671476163,0.705264687593482,0.339121184620975,0,0,0,0,0,0,0.207322110030741,0,0,0,1.28648187638577,0,0,0,0,0,0,0.220587945464788,0.217879444092406,0,0,0,0,0,0,0,0,1.26755034821831,0,0,1.32438929824395,0.368965315629341,0.171567810298526,0.109750285408626,0,0.100528972411631,0,0,0,0,0.115930404975077,0.469634776943287,0.144366447761074,0,0,0,0,0.984868024349589,0.234004265139238,0.297262324577456,0,0.16798212819886,0,0,0,0,1.97065295158377,0.528290604079356,1.86595303986695,1.72943944100354,1.2624243342638,0,0.381988425558278,0,0,0.205654985406647,0,0.285826432630578,0.112131084345361,0,0.2933531432838,0.129271715757778,0,0,0.531876233169741,0,0,0,0.266422179016099,0.142977993658148,0,0.823240336780769,0,0,0,0,0,0.699810938274399,0,0,0,0.239624855491583,1.14861935834114,0,0.723906533337896,0.410952645100767,1.07436577943937,0.112085143993527,9.06341496928865,8.40947541952118,7.18721003166591,1.27047312111232,7.8083912314573,3.86644406388848,3.35032530668698,1.91381625495949,0.749007023947182,2.99161459204025,0.414415513436035,0.49076596687656,0,0,1.03985430765404,0.535286966391485,0.315404830067869,0.585707074963566,0.300946099727719,0,1.03473071292505,0,0.184369168541703,0.868836144680828,0.195801157462741,0,4.9624326269493,8.19713963110744,3.52200940751366,0,0,0,0.496215615637554,1.68808170616869,0.561320188866147,0.640695746278505,2.04682899626681,0.482561763430822,0,0.308419387605311,0,0.0821271560138091,0,0,0.362578348774867,0.802025881213139,0.0920809889358963,0,0.546273504020151,0.393373244878272,0,0.15403067420883,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0.657779629937804,1.0457418040996,0,0.328014645699706,0,0.618246069886334,1.00726411300178,1.56768049849117,0.574265537996172,0,1.6068392984416,0.193341436584244,0,0.15350367472613,0.413509717453592,0.537101224341368,0.290033387828457,0.596586391912706,0.623224249527161,0,0.192190067365106,0.765676274967505,0,0,0,0,0,0,0,0.18532421910392,0,0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| ||
|short_description=p5@EPC1 | |||
}} | }} |
Latest revision as of 00:06, 18 September 2015
Short description: | p5@EPC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_EPC1_5end |
Coexpression cluster: | C1115_CD4_CD34_CD8_CD19_Basophils_Peripheral_Dendritic |
Association with transcript: | 7bp_to_uc001iwi.3, uc009xlt.2_5end |
EntrezGene: | EPC1 |
HGNC: | 19876 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 9.26e-18 | 18 |
alpha-beta T cell | 9.26e-18 | 18 |
immature T cell | 9.26e-18 | 18 |
mature T cell | 9.26e-18 | 18 |
immature alpha-beta T cell | 9.26e-18 | 18 |
leukocyte | 2.25e-16 | 136 |
lymphoid lineage restricted progenitor cell | 6.28e-15 | 52 |
lymphocyte | 1.97e-14 | 53 |
common lymphoid progenitor | 1.97e-14 | 53 |
CD8-positive, alpha-beta T cell | 1.11e-12 | 11 |
hematopoietic stem cell | 1.86e-12 | 168 |
T cell | 2.02e-12 | 25 |
pro-T cell | 2.02e-12 | 25 |
hematopoietic cell | 7.04e-12 | 177 |
hematopoietic lineage restricted progenitor cell | 1.21e-11 | 120 |
nongranular leukocyte | 1.89e-11 | 115 |
hematopoietic oligopotent progenitor cell | 1.77e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.77e-09 | 161 |
CD4-positive, alpha-beta T cell | 3.80e-08 | 6 |
intermediate monocyte | 8.50e-08 | 9 |
CD14-positive, CD16-positive monocyte | 8.50e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
neural tube | 4.20e-11 | 56 |
neural rod | 4.20e-11 | 56 |
future spinal cord | 4.20e-11 | 56 |
neural keel | 4.20e-11 | 56 |
nervous system | 6.01e-11 | 89 |
regional part of nervous system | 1.71e-10 | 53 |
regional part of brain | 1.71e-10 | 53 |
central nervous system | 2.97e-10 | 81 |
regional part of forebrain | 9.28e-09 | 41 |
forebrain | 9.28e-09 | 41 |
anterior neural tube | 9.28e-09 | 41 |
future forebrain | 9.28e-09 | 41 |
brain | 7.95e-08 | 68 |
future brain | 7.95e-08 | 68 |
neurectoderm | 6.72e-07 | 86 |