FFCP PHASE1:Hg19::chr17:31233..31253,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8447 | |EntrezGene=8447 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2986 | |HGNC=2986 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=17bp_to_AB590049,BC152720,BC153024_5end | |association_with_transcript=17bp_to_AB590049,BC152720,BC153024_5end | ||
|cluster_id=chr17:31233..31253,- | |||
|description=CAGE_peak_3_at_DOC2B_5end | |description=CAGE_peak_3_at_DOC2B_5end | ||
|id=chr17:31233..31253,- | |id=chr17:31233..31253,- | ||
|ontology_enrichment_celltype=CL:1000449!8.62e-09!16;CL:1000497!1.04e-08!18;CL:0002518!1.04e-08!18;CL:1000507!2.46e-08!12;CL:1000494!2.46e-08!12;CL:0002681!9.84e-08!13;CL:0002584!9.84e-08!13 | |ontology_enrichment_celltype=CL:1000449!8.62e-09!16;CL:1000497!1.04e-08!18;CL:0002518!1.04e-08!18;CL:1000507!2.46e-08!12;CL:1000494!2.46e-08!12;CL:0002681!9.84e-08!13;CL:0002584!9.84e-08!13 | ||
|ontology_enrichment_celltype_v019=CL:1000449;8.09e-17;15!CL:0002681;2.61e-16;12!CL:0002584;2.61e-16;12!CL:1000507;4.95e-15;10!CL:1000494;4.95e-15;10!CL:1000497;1.10e-14;17!CL:0002518;1.10e-14;17!CL:0000650;3.34e-10;2!CL:1000500;3.34e-10;2!CL:1000618;3.34e-10;2!CL:1001318;3.34e-10;2!CL:0002173;3.34e-10;2!CL:1000746;5.60e-10;7!CL:1000612;5.60e-10;7 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,1.12e-16,15;CL:0002681,4.01e-16,12;CL:0002584,4.01e-16,12;CL:1000507,6.85e-15,10;CL:1000494,6.85e-15,10;CL:1000497,1.47e-14,17;CL:0002518,1.47e-14,17;CL:0000650,3.36e-10,2;CL:1000500,3.36e-10,2;CL:1000618,3.36e-10,2;CL:1001318,3.36e-10,2;CL:0002173,3.36e-10,2;CL:1000746,5.89e-10,7;CL:1000612,5.89e-10,7 | |||
|ontology_enrichment_development_v019=UBERON:0005062;8.94e-10;4!UBERON:0007284;8.94e-10;4!UBERON:0003104;5.96e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.30e-45!115;UBERON:0002346!1.34e-16!90;UBERON:0003075!4.61e-16!86;UBERON:0007284!4.61e-16!86;UBERON:0001049!7.21e-15!57;UBERON:0005068!7.21e-15!57;UBERON:0006241!7.21e-15!57;UBERON:0007135!7.21e-15!57;UBERON:0000073!2.24e-12!94;UBERON:0001016!2.24e-12!94;UBERON:0005743!3.16e-12!86;UBERON:0002616!4.11e-12!59;UBERON:0001017!1.47e-11!82;UBERON:0000064!2.71e-11!219;UBERON:0000489!3.23e-11!32;UBERON:0003103!1.14e-10!69;UBERON:0000477!1.55e-10!286;UBERON:0000955!2.23e-10!69;UBERON:0006238!2.23e-10!69;UBERON:0004111!6.66e-10!241;UBERON:0003887!7.02e-10!21;UBERON:0000481!7.47e-10!347;UBERON:0006555!1.08e-09!17;UBERON:0005103!1.08e-09!17;UBERON:0000083!1.08e-09!17;UBERON:0009201!1.08e-09!17;UBERON:0004819!1.08e-09!17;UBERON:0006553!1.08e-09!17;UBERON:0003074!1.08e-09!17;UBERON:0003060!1.08e-09!17;UBERON:0002780!1.14e-09!41;UBERON:0001890!1.14e-09!41;UBERON:0006240!1.14e-09!41;UBERON:0002020!1.45e-09!34;UBERON:0003528!1.45e-09!34;UBERON:0001893!1.59e-09!34;UBERON:0000025!2.10e-09!194;UBERON:0003080!2.72e-09!42;UBERON:0004876!2.83e-09!20;UBERON:0000153!2.92e-09!129;UBERON:0007811!2.92e-09!129;UBERON:0002113!4.02e-09!27;UBERON:0003918!4.02e-09!27;UBERON:0005095!4.02e-09!27;UBERON:0007687!4.02e-09!27;UBERON:0000080!5.90e-09!18;UBERON:0002120!5.90e-09!18;UBERON:0004875!5.90e-09!18;UBERON:0005721!5.90e-09!18;UBERON:0005754!5.90e-09!18;UBERON:0007297!5.90e-09!18;UBERON:0003056!6.35e-09!61;UBERON:0002791!6.83e-09!33;UBERON:0004211!8.62e-09!16;UBERON:0001285!8.62e-09!16;UBERON:0007684!8.62e-09!16;UBERON:0003220!8.62e-09!16;UBERON:0004208!8.62e-09!16;UBERON:0000468!1.65e-08!659;UBERON:0001869!1.73e-08!32;UBERON:0009773!2.46e-08!12;UBERON:0001231!2.46e-08!12;UBERON:0004810!2.46e-08!12;UBERON:0000924!3.11e-08!173;UBERON:0006601!3.11e-08!173;UBERON:0000033!6.78e-08!123;UBERON:0004121!8.82e-08!169;UBERON:0001225!9.84e-08!13;UBERON:0008987!9.84e-08!13;UBERON:0001008!1.78e-07!45;UBERON:0000467!1.96e-07!625;UBERON:0002619!1.96e-07!22;UBERON:0001950!2.03e-07!20;UBERON:0000480!2.30e-07!626;UBERON:0003076!2.42e-07!15;UBERON:0003057!2.42e-07!15;UBERON:0000922!2.50e-07!612;UBERON:0000483!4.19e-07!309;UBERON:0000119!7.49e-07!312;UBERON:0006554!8.74e-07!44 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;8.09e-17;15!UBERON:0004819;8.09e-17;15!UBERON:0001285;8.09e-17;15!UBERON:0007684;8.09e-17;15!UBERON:0001225;2.61e-16;12!UBERON:0008987;2.61e-16;12!UBERON:0002113;1.09e-15;24!UBERON:0011143;1.09e-15;24!UBERON:0004211;4.95e-15;10!UBERON:0009773;4.95e-15;10!UBERON:0001231;4.95e-15;10!UBERON:0004810;4.95e-15;10!UBERON:0003978;7.09e-13;3!UBERON:0000946;7.09e-13;3!UBERON:0001851;7.51e-13;15!UBERON:0000353;7.51e-13;15!UBERON:0000489;1.21e-12;29!UBERON:0006554;3.71e-12;30!UBERON:0001008;3.71e-12;30!UBERON:0003567;3.34e-10;2!UBERON:0003838;3.34e-10;2!UBERON:0003586;3.34e-10;2!UBERON:0005169;3.34e-10;2!UBERON:0002321;3.34e-10;2!UBERON:0005215;3.34e-10;2!UBERON:0002303;3.34e-10;2!UBERON:0002319;3.34e-10;2!UBERON:0000074;5.60e-10;7!UBERON:0001229;5.60e-10;7!UBERON:0003127;8.00e-10;2!UBERON:0002133;2.98e-09;2!UBERON:0003103;8.43e-07;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,1.12e-16,15;UBERON:0009773,1.12e-16,15;UBERON:0001231,1.12e-16,15;UBERON:0001285,1.12e-16,15;UBERON:0007684,1.12e-16,15;UBERON:0004208,1.12e-16,15;UBERON:0001225,4.01e-16,12;UBERON:0008987,4.01e-16,12;UBERON:0003103,1.25e-15,68;UBERON:0006555,1.50e-15,16;UBERON:0004819,1.50e-15,16;UBERON:0004810,6.85e-15,10;UBERON:0002113,2.62e-14,26;UBERON:0003918,2.62e-14,26;UBERON:0011143,2.62e-14,26;UBERON:0005095,2.62e-14,26;UBERON:0007687,2.62e-14,26;UBERON:0007023,6.89e-14,114;UBERON:0003978,5.56e-13,3;UBERON:0009751,5.56e-13,3;UBERON:0000946,5.56e-13,3;UBERON:0002523,5.56e-13,3;UBERON:0005983,5.56e-13,3;UBERON:0002165,5.56e-13,3;UBERON:0002062,5.56e-13,3;UBERON:0007280,5.56e-13,3;UBERON:0001851,1.05e-12,15;UBERON:0000353,1.05e-12,15;UBERON:0000489,1.10e-11,31;UBERON:0003567,3.36e-10,2;UBERON:0003838,3.36e-10,2;UBERON:0003586,3.36e-10,2;UBERON:0005169,3.36e-10,2;UBERON:0002321,3.36e-10,2;UBERON:0005215,3.36e-10,2;UBERON:0002303,3.36e-10,2;UBERON:0002319,3.36e-10,2;UBERON:0010532,5.89e-10,7;UBERON:0000074,5.89e-10,7;UBERON:0001229,5.89e-10,7;UBERON:0001230,5.89e-10,7;UBERON:0003220,5.89e-10,7;UBERON:0005749,5.89e-10,7;UBERON:0004199,5.89e-10,7;UBERON:0004209,5.89e-10,7;UBERON:0004198,5.89e-10,7;UBERON:0003127,8.03e-10,2;UBERON:0004876,2.11e-09,11;UBERON:0002133,2.53e-09,2;UBERON:0005103,1.02e-08,8;UBERON:0000083,1.02e-08,8;UBERON:0009201,1.02e-08,8;UBERON:0006553,1.02e-08,8;UBERON:0003074,1.02e-08,8;UBERON:0003060,1.02e-08,8;UBERON:0001008,2.18e-08,48;UBERON:0000080,9.47e-08,9;UBERON:0002120,9.47e-08,9;UBERON:0004875,9.47e-08,9;UBERON:0005721,9.47e-08,9;UBERON:0005754,9.47e-08,9;UBERON:0007297,9.47e-08,9;UBERON:0005172,3.61e-07,54;UBERON:0005173,3.61e-07,54;UBERON:0006554,4.61e-07,47;UBERON:0005177,4.72e-07,101 | |||
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|short_description=p3@DOC2B | |short_description=p3@DOC2B | ||
}} | }} |
Latest revision as of 12:41, 19 September 2015
Short description: | p3@DOC2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DOC2B_5end |
Coexpression cluster: | NA |
Association with transcript: | 17bp_to_AB590049, BC152720, BC153024_5end |
EntrezGene: | DOC2B |
HGNC: | 2986 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 1.12e-16 | 15 |
kidney cortical cell | 4.01e-16 | 12 |
renal cortical epithelial cell | 4.01e-16 | 12 |
kidney tubule cell | 6.85e-15 | 10 |
nephron tubule epithelial cell | 6.85e-15 | 10 |
kidney cell | 1.47e-14 | 17 |
kidney epithelial cell | 1.47e-14 | 17 |
mesangial cell | 3.36e-10 | 2 |
kidney interstitial cell | 3.36e-10 | 2 |
juxtaglomerular complex cell | 3.36e-10 | 2 |
renal interstitial pericyte | 3.36e-10 | 2 |
extraglomerular mesangial cell | 3.36e-10 | 2 |
glomerular cell | 5.89e-10 | 7 |
kidney corpuscule cell | 5.89e-10 | 7 |