FFCP PHASE1:Hg19::chr10:75532712..75532799,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:75532712..75532799,+
|short_description=p4@FUT11
|description=CAGE_peak_4_at_FUT11_5end
|association_with_transcript=390bp_to_ENST00000465695_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=170384 | |EntrezGene=170384 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19233 | |HGNC=19233 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=390bp_to_ENST00000465695_5end | |||
|cluster_id=chr10:75532712..75532799,+ | |||
|description=CAGE_peak_4_at_FUT11_5end | |||
|id=chr10:75532712..75532799,+ | |||
|ontology_enrichment_celltype=CL:0000791!6.61e-09!18;CL:0000789!6.61e-09!18;CL:0002420!6.61e-09!18;CL:0002419!6.61e-09!18;CL:0000790!6.61e-09!18;CL:0000625!2.03e-07!11;CL:0000084!4.00e-07!25;CL:0000827!4.00e-07!25;CL:0000838!9.92e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000791;8.42e-12;18!CL:0000789;8.42e-12;18!CL:0002419;8.42e-12;18!CL:0000625;6.34e-10;11!CL:0000084;4.07e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,6.77e-12,18;CL:0000789,6.77e-12,18;CL:0002420,6.77e-12,18;CL:0002419,6.77e-12,18;CL:0000790,6.77e-12,18;CL:0000625,8.29e-10,11;CL:0000084,3.80e-09,25;CL:0000827,3.80e-09,25;CL:0000838,9.06e-09,52;CL:0000542,2.10e-08,53;CL:0000051,2.10e-08,53 | |||
|ontology_enrichment_development_v019=CL:0000790;8.42e-12;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;1.07e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.47e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.09e-09!115;UBERON:0001049!4.40e-09!57;UBERON:0005068!4.40e-09!57;UBERON:0006241!4.40e-09!57;UBERON:0007135!4.40e-09!57;UBERON:0001869!7.52e-09!32;UBERON:0002020!8.85e-09!34;UBERON:0003528!8.85e-09!34;UBERON:0002780!1.18e-08!41;UBERON:0001890!1.18e-08!41;UBERON:0006240!1.18e-08!41;UBERON:0001893!1.57e-08!34;UBERON:0002616!2.00e-08!59;UBERON:0002619!3.70e-08!22;UBERON:0002791!4.61e-08!33;UBERON:0003080!5.50e-08!42;UBERON:0003075!1.46e-07!86;UBERON:0007284!1.46e-07!86;UBERON:0002346!1.87e-07!90;UBERON:0001950!1.95e-07!20;UBERON:0000955!3.76e-07!69;UBERON:0006238!3.76e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.12e-11;22!UBERON:0001869;4.98e-11;32!UBERON:0003528;9.54e-11;34!UBERON:0002020;9.54e-11;34!UBERON:0001950;1.80e-10;20!UBERON:0002791;5.58e-10;32!UBERON:0001893;1.23e-09;34!UBERON:0000956;3.22e-09;25!UBERON:0000203;3.22e-09;25!UBERON:0002780;2.23e-07;41!UBERON:0001890;2.23e-07;41!UBERON:0000073;6.76e-07;53!UBERON:0002616;6.76e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.69e-12,53;UBERON:0002616,1.69e-12,53;UBERON:0001869,2.71e-12,32;UBERON:0003528,6.30e-12,34;UBERON:0002020,6.30e-12,34;UBERON:0001049,6.62e-12,56;UBERON:0005068,6.62e-12,56;UBERON:0006241,6.62e-12,56;UBERON:0007135,6.62e-12,56;UBERON:0002619,1.80e-11,22;UBERON:0001893,5.01e-11,34;UBERON:0002791,5.66e-11,32;UBERON:0001950,1.89e-10,20;UBERON:0002780,2.29e-10,41;UBERON:0001890,2.29e-10,41;UBERON:0003080,2.29e-10,41;UBERON:0006240,2.29e-10,41;UBERON:0000956,2.79e-09,25;UBERON:0000203,2.79e-09,25;UBERON:0003075,1.42e-08,82;UBERON:0007284,1.42e-08,82;UBERON:0007023,2.77e-08,114;UBERON:0000955,2.92e-08,68;UBERON:0006238,2.92e-08,68;UBERON:0002346,6.02e-08,86 | |||
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|short_description=p4@FUT11 | |||
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Latest revision as of 07:44, 19 September 2015
Short description: | p4@FUT11 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FUT11_5end |
Coexpression cluster: | NA |
Association with transcript: | 390bp_to_ENST00000465695_5end |
EntrezGene: | FUT11 |
HGNC: | 19233 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 6.77e-12 | 18 |
alpha-beta T cell | 6.77e-12 | 18 |
immature T cell | 6.77e-12 | 18 |
mature T cell | 6.77e-12 | 18 |
immature alpha-beta T cell | 6.77e-12 | 18 |
CD8-positive, alpha-beta T cell | 8.29e-10 | 11 |
T cell | 3.80e-09 | 25 |
pro-T cell | 3.80e-09 | 25 |
lymphoid lineage restricted progenitor cell | 9.06e-09 | 52 |
lymphocyte | 2.10e-08 | 53 |
common lymphoid progenitor | 2.10e-08 | 53 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 1.69e-12 | 53 |
regional part of brain | 1.69e-12 | 53 |
cerebral hemisphere | 2.71e-12 | 32 |
brain grey matter | 6.30e-12 | 34 |
gray matter | 6.30e-12 | 34 |
neural tube | 6.62e-12 | 56 |
neural rod | 6.62e-12 | 56 |
future spinal cord | 6.62e-12 | 56 |
neural keel | 6.62e-12 | 56 |
regional part of cerebral cortex | 1.80e-11 | 22 |
telencephalon | 5.01e-11 | 34 |
regional part of telencephalon | 5.66e-11 | 32 |
neocortex | 1.89e-10 | 20 |
regional part of forebrain | 2.29e-10 | 41 |
forebrain | 2.29e-10 | 41 |
anterior neural tube | 2.29e-10 | 41 |
future forebrain | 2.29e-10 | 41 |
cerebral cortex | 2.79e-09 | 25 |
pallium | 2.79e-09 | 25 |
neural plate | 1.42e-08 | 82 |
presumptive neural plate | 1.42e-08 | 82 |
adult organism | 2.77e-08 | 114 |
brain | 2.92e-08 | 68 |
future brain | 2.92e-08 | 68 |
neurectoderm | 6.02e-08 | 86 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.47e-07 | 14 |