FFCP PHASE1:Hg19::chr10:91174486..91174528,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:91174486..91174528,+
|short_description=p1@IFIT5
|description=CAGE_peak_1_at_IFIT5_5end
|association_with_transcript=0bp_to_ENST00000416601_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=24138 | |EntrezGene=24138 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13328 | |HGNC=13328 | ||
|TSSclassifier=strong | |||
|UniProt=B4DDV1 | |UniProt=B4DDV1 | ||
|association_with_transcript=0bp_to_ENST00000416601_5end | |||
|cluster_id=chr10:91174486..91174528,+ | |||
|description=CAGE_peak_1_at_IFIT5_5end | |||
|id=chr10:91174486..91174528,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.34e-12!180;CL:0000057!8.23e-10!75;CL:0002620!3.28e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.85e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.81e-10,76;CL:0002620,3.25e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.58e-18!94;UBERON:0001016!1.58e-18!94;UBERON:0001017!6.30e-18!82;UBERON:0005743!8.55e-18!86;UBERON:0002616!8.37e-17!59;UBERON:0001049!5.77e-16!57;UBERON:0005068!5.77e-16!57;UBERON:0006241!5.77e-16!57;UBERON:0007135!5.77e-16!57;UBERON:0000955!2.45e-15!69;UBERON:0006238!2.45e-15!69;UBERON:0007023!1.21e-13!115;UBERON:0003080!5.92e-13!42;UBERON:0002780!9.75e-13!41;UBERON:0001890!9.75e-13!41;UBERON:0006240!9.75e-13!41;UBERON:0004121!3.23e-11!169;UBERON:0000924!1.40e-10!173;UBERON:0006601!1.40e-10!173;UBERON:0000033!2.18e-10!123;UBERON:0002020!2.26e-10!34;UBERON:0003528!2.26e-10!34;UBERON:0001893!2.59e-10!34;UBERON:0003075!3.66e-10!86;UBERON:0007284!3.66e-10!86;UBERON:0002791!7.84e-10!33;UBERON:0001869!1.98e-09!32;UBERON:0000153!2.10e-09!129;UBERON:0007811!2.10e-09!129;UBERON:0002346!2.96e-09!90;UBERON:0003056!8.72e-08!61;UBERON:0000475!1.34e-07!365;UBERON:0002619!2.95e-07!22;UBERON:0000956!3.75e-07!25;UBERON:0000203!3.75e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.22e-09;53!UBERON:0002616;1.22e-09;53!UBERON:0002780;1.64e-09;41!UBERON:0001890;1.64e-09;41!UBERON:0003528;5.10e-09;34!UBERON:0002020;5.10e-09;34!UBERON:0001893;6.52e-09;34!UBERON:0002791;1.29e-08;32!UBERON:0001869;1.30e-08;32!UBERON:0001017;1.57e-07;75!UBERON:0002619;2.75e-07;22!UBERON:0000956;3.44e-07;25!UBERON:0000203;3.44e-07;25!UBERON:0001016;4.05e-07;83!UBERON:0000955;8.74e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.12e-18,89;UBERON:0001017,1.14e-17,81;UBERON:0001049,1.12e-15,56;UBERON:0005068,1.12e-15,56;UBERON:0006241,1.12e-15,56;UBERON:0007135,1.12e-15,56;UBERON:0000955,4.36e-15,68;UBERON:0006238,4.36e-15,68;UBERON:0000073,6.31e-15,53;UBERON:0002616,6.31e-15,53;UBERON:0010314,1.41e-13,132;UBERON:0007023,2.79e-13,114;UBERON:0002780,9.62e-13,41;UBERON:0001890,9.62e-13,41;UBERON:0003080,9.62e-13,41;UBERON:0006240,9.62e-13,41;UBERON:0004121,1.32e-11,171;UBERON:0000924,1.32e-11,171;UBERON:0006601,1.32e-11,171;UBERON:0003075,2.35e-11,82;UBERON:0007284,2.35e-11,82;UBERON:0003528,2.24e-10,34;UBERON:0002020,2.24e-10,34;UBERON:0002346,2.48e-10,86;UBERON:0001893,2.56e-10,34;UBERON:0002791,1.89e-09,32;UBERON:0001869,1.96e-09,32;UBERON:0010371,1.24e-08,104;UBERON:0011216,4.85e-08,223;UBERON:0003056,5.52e-08,61;UBERON:0002619,2.93e-07,22;UBERON:0000956,3.73e-07,25;UBERON:0000203,3.73e-07,25 | |||
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| ||
|short_description=p1@IFIT5 | |||
}} | }} |
Latest revision as of 22:38, 19 September 2015
Short description: | p1@IFIT5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IFIT5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000416601_5end |
EntrezGene: | IFIT5 |
HGNC: | 13328 |
UniProt: | B4DDV1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.81e-10 | 76 |
skin fibroblast | 3.25e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.12e-18 | 89 |
central nervous system | 1.14e-17 | 81 |
neural tube | 1.12e-15 | 56 |
neural rod | 1.12e-15 | 56 |
future spinal cord | 1.12e-15 | 56 |
neural keel | 1.12e-15 | 56 |
brain | 4.36e-15 | 68 |
future brain | 4.36e-15 | 68 |
regional part of nervous system | 6.31e-15 | 53 |
regional part of brain | 6.31e-15 | 53 |
structure with developmental contribution from neural crest | 1.41e-13 | 132 |
adult organism | 2.79e-13 | 114 |
regional part of forebrain | 9.62e-13 | 41 |
forebrain | 9.62e-13 | 41 |
anterior neural tube | 9.62e-13 | 41 |
future forebrain | 9.62e-13 | 41 |
ectoderm-derived structure | 1.32e-11 | 171 |
ectoderm | 1.32e-11 | 171 |
presumptive ectoderm | 1.32e-11 | 171 |
neural plate | 2.35e-11 | 82 |
presumptive neural plate | 2.35e-11 | 82 |
brain grey matter | 2.24e-10 | 34 |
gray matter | 2.24e-10 | 34 |
neurectoderm | 2.48e-10 | 86 |
telencephalon | 2.56e-10 | 34 |
regional part of telencephalon | 1.89e-09 | 32 |
cerebral hemisphere | 1.96e-09 | 32 |
ecto-epithelium | 1.24e-08 | 104 |
organ system subdivision | 4.85e-08 | 223 |
pre-chordal neural plate | 5.52e-08 | 61 |
regional part of cerebral cortex | 2.93e-07 | 22 |
cerebral cortex | 3.73e-07 | 25 |
pallium | 3.73e-07 | 25 |