FFCP PHASE1:Hg19::chr19:50084621..50084673,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5639 | |EntrezGene=5639 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9470 | |HGNC=9470 | ||
|TSSclassifier=strong | |||
|UniProt=F5GZ13 | |UniProt=F5GZ13 | ||
|association_with_transcript=0bp_to_ENST00000543867_5end | |association_with_transcript=0bp_to_ENST00000543867_5end | ||
|cluster_id=chr19:50084621..50084673,+ | |||
|coexpression_cluster_id=C543 | |||
|description=CAGE_peak_2_at_PRRG2_5end | |description=CAGE_peak_2_at_PRRG2_5end | ||
|id=chr19:50084621..50084673,+ | |id=chr19:50084621..50084673,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.89e-28!254;CL:0002076!1.39e-23!43;CL:0000223!1.05e-17!59;CL:0002251!3.94e-12!21;CL:0002368!7.27e-11!13;CL:0002159!1.65e-08!13;CL:0002202!1.90e-07!9;CL:0002632!1.90e-07!9 | |ontology_enrichment_celltype=CL:0000066!3.89e-28!254;CL:0002076!1.39e-23!43;CL:0000223!1.05e-17!59;CL:0002251!3.94e-12!21;CL:0002368!7.27e-11!13;CL:0002159!1.65e-08!13;CL:0002202!1.90e-07!9;CL:0002632!1.90e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002076;2.23e-16;42!CL:0002368;2.30e-14;13!CL:0002202;1.06e-09;9!CL:0002632;1.06e-09;9!CL:0002251;4.73e-08;20!CL:0000082;1.56e-07;19!CL:0000244;2.66e-07;4!CL:0000731;2.66e-07;4!CL:0002159;2.85e-07;14!CL:0002327;4.12e-07;4!CL:0000349;6.66e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.54e-26,253;CL:0002076,7.67e-22,42;CL:0000223,1.65e-15,58;CL:0002368,3.88e-14,13;CL:0002202,1.38e-09,9;CL:0002632,1.38e-09,9;CL:0002251,2.87e-08,20;CL:0000082,1.59e-07,19;CL:0000244,2.59e-07,4;CL:0000731,2.59e-07,4;CL:0002159,3.75e-07,14;CL:0002327,4.69e-07,4;CL:0000349,6.51e-07,19 | |||
|ontology_enrichment_development_v019=CL:0000223;4.34e-09;58 | |||
|ontology_enrichment_disease=DOID:305!1.04e-15!106;DOID:1749!2.98e-12!14;DOID:0050687!1.67e-09!143;DOID:299!5.32e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.92e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.67e-10,14;DOID:305,5.10e-10,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.53e-29!169;UBERON:0000925!5.53e-29!169;UBERON:0006595!5.53e-29!169;UBERON:0001007!2.48e-21!155;UBERON:0001555!2.48e-21!155;UBERON:0007026!2.48e-21!155;UBERON:0004921!6.53e-18!129;UBERON:0004185!6.53e-18!129;UBERON:0001004!5.91e-17!72;UBERON:0000077!7.06e-17!130;UBERON:0005911!1.56e-13!82;UBERON:0000464!1.28e-12!104;UBERON:0005153!2.62e-12!37;UBERON:0001041!9.79e-12!98;UBERON:0000065!1.52e-11!53;UBERON:0000466!1.74e-11!126;UBERON:0000161!6.98e-11!35;UBERON:0005631!1.51e-10!14;UBERON:0000158!1.51e-10!14;UBERON:0005178!1.55e-10!34;UBERON:0002224!1.55e-10!34;UBERON:0005181!4.91e-10!35;UBERON:0000166!1.88e-09!21;UBERON:0005157!2.24e-09!51;UBERON:0000062!2.51e-09!511;UBERON:0004175!2.58e-08!25;UBERON:0002048!3.82e-08!22;UBERON:0000117!3.82e-08!22;UBERON:0000171!3.82e-08!22;UBERON:0000170!3.82e-08!22;UBERON:0005597!3.82e-08!22;UBERON:0000118!3.82e-08!22;UBERON:0008947!6.22e-08!38;UBERON:0003258!6.22e-08!38;UBERON:0003124!8.54e-08!7;UBERON:0005156!1.08e-07!59;UBERON:0000990!1.08e-07!59;UBERON:0000915!1.47e-07!52;UBERON:0000072!1.53e-07!46;UBERON:0006554!1.91e-07!44;UBERON:0000064!2.59e-07!219;UBERON:0002530!3.33e-07!59;UBERON:0005177!3.39e-07!107;UBERON:0001008!3.91e-07!45;UBERON:0004807!3.93e-07!28;UBERON:0000344!4.54e-07!12;UBERON:0000165!5.18e-07!28;UBERON:0000930!5.18e-07!28;UBERON:0000468!5.43e-07!659;UBERON:0003100!6.57e-07!41;UBERON:0000995!7.63e-07!21;UBERON:0000922!8.23e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0005178;2.59e-12;34!UBERON:0002224;2.59e-12;34!UBERON:0005181;2.91e-11;35!UBERON:0004921;3.74e-11;33!UBERON:0005911;4.17e-10;36!UBERON:0002048;6.16e-10;22!UBERON:0004807;6.16e-10;22!UBERON:0000117;6.16e-10;22!UBERON:0000171;6.16e-10;22!UBERON:0000170;6.16e-10;22!UBERON:0000365;2.29e-08;5!UBERON:0001041;3.66e-08;14!UBERON:0000065;4.93e-08;44!UBERON:0007196;5.46e-08;15!UBERON:0001558;5.46e-08;15!UBERON:0001555;7.31e-08;54!UBERON:0004802;1.56e-07;19!UBERON:0000115;1.56e-07;19!UBERON:0005631;2.59e-07;10!UBERON:0000158;2.59e-07;10!UBERON:0001911;4.12e-07;4!UBERON:0001987;6.69e-07;4!UBERON:0005910;7.42e-07;6!UBERON:0000486;7.93e-07;12!UBERON:0000915;8.54e-07;52!UBERON:0002294;8.80e-07;7!UBERON:0001173;8.80e-07;7!UBERON:0005409;9.17e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.71e-29,160;UBERON:0000925,3.71e-29,160;UBERON:0006595,3.71e-29,160;UBERON:0001007,3.69e-20,145;UBERON:0001555,3.69e-20,145;UBERON:0007026,3.69e-20,145;UBERON:0004921,1.01e-16,118;UBERON:0001004,3.51e-14,74;UBERON:0005911,7.34e-14,82;UBERON:0005153,8.90e-14,37;UBERON:0005178,1.00e-13,34;UBERON:0002224,1.00e-13,34;UBERON:0005181,3.72e-13,35;UBERON:0005631,4.50e-12,14;UBERON:0000158,4.50e-12,14;UBERON:0005157,5.58e-12,47;UBERON:0001041,8.05e-12,87;UBERON:0000065,6.93e-11,54;UBERON:0002048,5.75e-10,22;UBERON:0000117,5.75e-10,22;UBERON:0000171,5.75e-10,22;UBERON:0000170,5.75e-10,22;UBERON:0005597,5.75e-10,22;UBERON:0000118,5.75e-10,22;UBERON:0000915,6.34e-10,52;UBERON:0005177,1.53e-09,101;UBERON:0006554,1.94e-09,47;UBERON:0001008,4.05e-09,48;UBERON:0008947,7.05e-09,38;UBERON:0003258,7.05e-09,38;UBERON:0000365,2.40e-08,5;UBERON:0009569,6.50e-08,112;UBERON:0007196,6.94e-08,15;UBERON:0001558,6.94e-08,15;UBERON:0003124,7.84e-08,7;UBERON:0004802,1.59e-07,19;UBERON:0000115,1.59e-07,19;UBERON:0000161,1.68e-07,36;UBERON:0004175,3.53e-07,25;UBERON:0004807,3.88e-07,28;UBERON:0000166,4.10e-07,22;UBERON:0001911,4.69e-07,4;UBERON:0005333,4.69e-07,4;UBERON:0008425,4.69e-07,4;UBERON:0005311,4.69e-07,4;UBERON:0005910,7.70e-07,6;UBERON:0001987,9.33e-07,4;UBERON:0004340,9.33e-07,4 | |||
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| ||
|short_description=p2@PRRG2 | |short_description=p2@PRRG2 | ||
}} | }} |
Latest revision as of 08:14, 19 September 2015
Short description: | p2@PRRG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PRRG2_5end |
Coexpression cluster: | C543_Alveolar_Corneal_Urothelial_amniotic_Esophageal_Tracheal_esophagus |
Association with transcript: | 0bp_to_ENST00000543867_5end |
EntrezGene: | PRRG2 |
HGNC: | 9470 |
UniProt: | F5GZ13 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.54e-26 | 253 |
endo-epithelial cell | 7.67e-22 | 42 |
endodermal cell | 1.65e-15 | 58 |
respiratory epithelial cell | 3.88e-14 | 13 |
epithelial cell of tracheobronchial tree | 1.38e-09 | 9 |
epithelial cell of lower respiratory tract | 1.38e-09 | 9 |
epithelial cell of alimentary canal | 2.87e-08 | 20 |
epithelial cell of lung | 1.59e-07 | 19 |
transitional epithelial cell | 2.59e-07 | 4 |
urothelial cell | 2.59e-07 | 4 |
general ecto-epithelial cell | 3.75e-07 | 14 |
mammary gland epithelial cell | 4.69e-07 | 4 |
extraembryonic cell | 6.51e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.67e-10 | 14 |
carcinoma | 5.10e-10 | 106 |