FFCP PHASE1:Hg19::chr14:39572307..39572340,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10484 | |EntrezGene=10484 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10701 | |HGNC=10701 | ||
|TSSclassifier=strong | |||
|UniProt=F5H6C4 | |UniProt=F5H6C4 | ||
|association_with_transcript=-28bp_to_ENST00000536508_5end | |association_with_transcript=-28bp_to_ENST00000536508_5end | ||
|cluster_id=chr14:39572307..39572340,- | |||
|description=CAGE_peak_2_at_SEC23A_5end | |description=CAGE_peak_2_at_SEC23A_5end | ||
|id=chr14:39572307..39572340,- | |id=chr14:39572307..39572340,- | ||
|ontology_enrichment_celltype=CL:0000055!4.96e-34!180;CL:0000057!6.43e-20!75;CL:0000680!1.91e-18!57;CL:0000056!1.91e-18!57;CL:0000355!1.91e-18!57;CL:0000187!3.69e-17!54;CL:0000222!2.27e-15!119;CL:0000393!5.16e-15!60;CL:0000211!5.16e-15!60;CL:0000192!6.13e-15!42;CL:0000514!6.13e-15!42;CL:0000359!5.31e-14!32;CL:0000183!2.44e-13!59;CL:0000220!6.39e-12!246;CL:0002321!1.20e-11!248;CL:0002620!2.56e-09!23;CL:0000136!1.75e-08!15;CL:0002334!2.44e-08!12;CL:0002494!1.42e-07!16 | |ontology_enrichment_celltype=CL:0000055!4.96e-34!180;CL:0000057!6.43e-20!75;CL:0000680!1.91e-18!57;CL:0000056!1.91e-18!57;CL:0000355!1.91e-18!57;CL:0000187!3.69e-17!54;CL:0000222!2.27e-15!119;CL:0000393!5.16e-15!60;CL:0000211!5.16e-15!60;CL:0000192!6.13e-15!42;CL:0000514!6.13e-15!42;CL:0000359!5.31e-14!32;CL:0000183!2.44e-13!59;CL:0000220!6.39e-12!246;CL:0002321!1.20e-11!248;CL:0002620!2.56e-09!23;CL:0000136!1.75e-08!15;CL:0002334!2.44e-08!12;CL:0002494!1.42e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.53e-13;32!CL:0000192;3.52e-11;43!CL:0000187;7.18e-10;55!CL:0002620;1.78e-09;23!CL:0002334;1.95e-08;12!CL:0000393;2.04e-08;61!CL:0000211;2.04e-08;61!CL:0000057;2.94e-08;73!CL:0000134;9.53e-08;55!CL:0002494;1.16e-07;16!CL:0000136;1.30e-07;13!CL:0000723;1.79e-07;61!CL:0000048;5.21e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.68e-20,76;CL:0000680,7.75e-19,58;CL:0000056,7.75e-19,58;CL:0000355,7.75e-19,58;CL:0000187,1.52e-17,55;CL:0000222,1.31e-15,121;CL:0000393,2.21e-15,61;CL:0000211,2.21e-15,61;CL:0000192,2.63e-15,43;CL:0000514,2.63e-15,43;CL:0000359,4.64e-14,32;CL:0002321,1.06e-11,250;CL:0002620,2.36e-09,23;CL:0000136,1.62e-08,15;CL:0002334,2.27e-08,12;CL:0002494,1.33e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;3.52e-11;43!CL:0000355;6.65e-10;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.67e-22!83;UBERON:0002329!4.67e-22!83;UBERON:0003077!4.67e-22!83;UBERON:0003059!4.67e-22!83;UBERON:0007282!4.67e-22!83;UBERON:0009618!4.67e-22!83;UBERON:0007285!4.67e-22!83;UBERON:0004290!2.29e-19!70;UBERON:0005256!7.21e-19!143;UBERON:0000490!7.62e-19!138;UBERON:0002385!2.38e-18!63;UBERON:0001015!2.38e-18!63;UBERON:0000383!2.38e-18!63;UBERON:0001134!1.44e-17!61;UBERON:0002036!1.44e-17!61;UBERON:0003082!1.44e-17!61;UBERON:0002049!8.25e-17!79;UBERON:0007798!8.25e-17!79;UBERON:0000486!2.31e-16!82;UBERON:0004872!3.26e-16!84;UBERON:0003914!1.66e-15!118;UBERON:0001981!1.18e-14!60;UBERON:0007500!1.18e-14!60;UBERON:0004537!1.18e-14!60;UBERON:0006965!1.18e-14!60;UBERON:0002100!3.63e-14!216;UBERON:0004535!4.17e-14!110;UBERON:0001009!8.00e-14!113;UBERON:0000055!1.06e-13!69;UBERON:0001637!1.74e-13!42;UBERON:0003509!1.74e-13!42;UBERON:0004572!1.74e-13!42;UBERON:0000481!3.63e-13!347;UBERON:0000475!7.07e-13!365;UBERON:0003104!4.25e-12!238;UBERON:0009142!4.25e-12!238;UBERON:0000468!1.45e-11!659;UBERON:0004573!1.51e-11!33;UBERON:0004571!1.51e-11!33;UBERON:0000467!2.60e-09!625;UBERON:0000480!4.16e-09!626;UBERON:0000119!4.20e-09!312;UBERON:0000483!6.44e-09!309;UBERON:0003102!1.65e-08!95;UBERON:0000477!2.10e-08!286;UBERON:0002199!2.70e-08!45;UBERON:0002416!2.70e-08!45;UBERON:0000926!2.76e-08!448;UBERON:0004120!2.76e-08!448;UBERON:0006603!2.76e-08!448;UBERON:0000948!4.17e-08!24;UBERON:0005498!4.17e-08!24;UBERON:0004140!4.17e-08!24;UBERON:0009881!4.17e-08!24;UBERON:0004141!4.17e-08!24;UBERON:0003084!4.17e-08!24;UBERON:0007005!4.17e-08!24;UBERON:0004139!4.17e-08!24;UBERON:0004291!4.17e-08!24;UBERON:0007100!2.09e-07!27;UBERON:0001135!5.98e-07!15;UBERON:0001013!8.79e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.68e-10;33!UBERON:0004571;1.68e-10;33!UBERON:0001637;7.22e-10;42!UBERON:0003509;7.22e-10;42!UBERON:0004572;7.22e-10;42!UBERON:0002385;3.50e-08;31!UBERON:0001015;3.50e-08;31!UBERON:0000383;3.50e-08;31!UBERON:0007500;5.51e-08;56!UBERON:0001981;5.51e-08;56!UBERON:0004537;5.51e-08;56!UBERON:0000948;1.92e-07;22!UBERON:0002049;4.69e-07;75!UBERON:0007798;4.69e-07;75!UBERON:0001135;5.66e-07;15!UBERON:0007100;7.44e-07;25!UBERON:0001013;8.15e-07;14 | |||
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| ||
|short_description=p2@SEC23A | |short_description=p2@SEC23A | ||
}} | }} |
Latest revision as of 23:58, 19 September 2015
Short description: | p2@SEC23A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SEC23A_5end |
Coexpression cluster: | NA |
Association with transcript: | -28bp_to_ENST00000536508_5end |
EntrezGene: | SEC23A |
HGNC: | 10701 |
UniProt: | F5H6C4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.68e-20 | 76 |
muscle precursor cell | 7.75e-19 | 58 |
myoblast | 7.75e-19 | 58 |
multi-potent skeletal muscle stem cell | 7.75e-19 | 58 |
muscle cell | 1.52e-17 | 55 |
mesodermal cell | 1.31e-15 | 121 |
electrically responsive cell | 2.21e-15 | 61 |
electrically active cell | 2.21e-15 | 61 |
smooth muscle cell | 2.63e-15 | 43 |
smooth muscle myoblast | 2.63e-15 | 43 |
vascular associated smooth muscle cell | 4.64e-14 | 32 |
embryonic cell | 1.06e-11 | 250 |
skin fibroblast | 2.36e-09 | 23 |
fat cell | 1.62e-08 | 15 |
preadipocyte | 2.27e-08 | 12 |
cardiocyte | 1.33e-07 | 16 |