FFCP PHASE1:Hg19::chr1:6086385..6086411,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8514 | |EntrezGene=8514 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6229 | |HGNC=6229 | ||
|TSSclassifier=strong | |||
|UniProt=Q13303,E7ESI4,Q2YD85,B0AZR7 | |UniProt=Q13303,E7ESI4,Q2YD85,B0AZR7 | ||
|association_with_transcript=5bp_to_ENST00000341524,ENST00000352527,ENST00000378087,uc001alu.2,uc001alv.1,uc001alw.1_5end | |association_with_transcript=5bp_to_ENST00000341524,ENST00000352527,ENST00000378087,uc001alu.2,uc001alv.1,uc001alw.1_5end | ||
|cluster_id=chr1:6086385..6086411,+ | |||
|coexpression_cluster_id=C2595 | |||
|description=CAGE_peak_1_at_KCNAB2_5end | |description=CAGE_peak_1_at_KCNAB2_5end | ||
|id=chr1:6086385..6086411,+ | |id=chr1:6086385..6086411,+ | ||
|ontology_enrichment_celltype=CL:0000037!6.23e-71!172;CL:0000566!6.23e-71!172;CL:0002032!5.19e-67!165;CL:0000837!5.19e-67!165;CL:0000988!4.01e-66!182;CL:0000738!2.55e-64!140;CL:0002087!5.36e-56!119;CL:0002031!6.82e-56!124;CL:0000763!2.73e-43!112;CL:0000049!2.73e-43!112;CL:0000766!7.21e-39!76;CL:0000557!3.00e-35!71;CL:0000839!1.53e-34!70;CL:0002009!3.25e-33!65;CL:0002194!3.78e-33!63;CL:0000576!3.78e-33!63;CL:0000040!3.78e-33!63;CL:0000559!3.78e-33!63;CL:0000860!8.01e-26!45;CL:0002057!3.06e-25!42;CL:0000542!6.46e-20!53;CL:0000051!6.46e-20!53;CL:0000838!1.49e-19!52;CL:0000084!1.35e-11!25;CL:0000827!1.35e-11!25;CL:0000791!1.41e-08!18;CL:0000789!1.41e-08!18;CL:0002420!1.41e-08!18;CL:0002419!1.41e-08!18;CL:0000790!1.41e-08!18;CL:0000945!3.17e-08!24;CL:0000826!3.17e-08!24;CL:0000134!6.67e-08!358;CL:0000219!5.81e-07!390;CL:0002320!7.08e-07!365 | |ontology_enrichment_celltype=CL:0000037!6.23e-71!172;CL:0000566!6.23e-71!172;CL:0002032!5.19e-67!165;CL:0000837!5.19e-67!165;CL:0000988!4.01e-66!182;CL:0000738!2.55e-64!140;CL:0002087!5.36e-56!119;CL:0002031!6.82e-56!124;CL:0000763!2.73e-43!112;CL:0000049!2.73e-43!112;CL:0000766!7.21e-39!76;CL:0000557!3.00e-35!71;CL:0000839!1.53e-34!70;CL:0002009!3.25e-33!65;CL:0002194!3.78e-33!63;CL:0000576!3.78e-33!63;CL:0000040!3.78e-33!63;CL:0000559!3.78e-33!63;CL:0000860!8.01e-26!45;CL:0002057!3.06e-25!42;CL:0000542!6.46e-20!53;CL:0000051!6.46e-20!53;CL:0000838!1.49e-19!52;CL:0000084!1.35e-11!25;CL:0000827!1.35e-11!25;CL:0000791!1.41e-08!18;CL:0000789!1.41e-08!18;CL:0002420!1.41e-08!18;CL:0002419!1.41e-08!18;CL:0000790!1.41e-08!18;CL:0000945!3.17e-08!24;CL:0000826!3.17e-08!24;CL:0000134!6.67e-08!358;CL:0000219!5.81e-07!390;CL:0002320!7.08e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.28e-21;39!CL:0000234;1.28e-21;39!CL:0000860;1.94e-21;33!CL:0002057;1.94e-21;33!CL:0000576;2.07e-20;48!CL:0000766;2.52e-18;69!CL:0002087;1.66e-16;104!CL:0000738;1.50e-15;136!CL:0000763;6.81e-15;100!CL:0000542;4.77e-13;53!CL:0000988;6.43e-13;177!CL:0000084;6.72e-13;25!CL:0000791;1.72e-09;18!CL:0000789;1.72e-09;18!CL:0002419;1.72e-09;18!CL:0000945;4.56e-09;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.39e-81,168;CL:0000988,2.14e-77,177;CL:0002032,3.80e-77,161;CL:0000837,3.80e-77,161;CL:0000738,7.82e-73,136;CL:0002087,1.56e-63,115;CL:0002031,2.39e-63,120;CL:0000763,2.16e-50,108;CL:0000049,2.16e-50,108;CL:0000766,1.93e-44,72;CL:0000557,2.52e-40,67;CL:0000839,1.61e-39,66;CL:0002009,4.37e-38,61;CL:0002194,4.60e-38,59;CL:0000576,4.60e-38,59;CL:0000040,4.60e-38,59;CL:0000559,4.60e-38,59;CL:0000473,1.26e-32,48;CL:0000234,1.26e-32,48;CL:0000860,2.76e-28,42;CL:0002057,2.76e-28,42;CL:0000542,2.86e-22,53;CL:0000051,2.86e-22,53;CL:0000838,7.34e-22,52;CL:0000134,2.21e-13,354;CL:0000084,7.03e-13,25;CL:0000827,7.03e-13,25;CL:0002320,4.75e-12,361;CL:0000219,6.64e-12,386;CL:0000791,1.78e-09,18;CL:0000789,1.78e-09,18;CL:0002420,1.78e-09,18;CL:0002419,1.78e-09,18;CL:0000790,1.78e-09,18;CL:0000945,4.43e-09,24;CL:0000826,4.43e-09,24 | |||
|ontology_enrichment_development_v019=CL:0002057;1.52e-20;42!CL:0000049;3.63e-14;108!CL:0000051;4.77e-13;53!CL:0000790;1.72e-09;18 | |||
|ontology_enrichment_disease=DOID:2531!2.76e-12!51;DOID:0060083!2.76e-12!51;DOID:1240!1.77e-09!39 | |||
|ontology_enrichment_disease_v019=DOID:2531;2.59e-09;51!DOID:0060083;2.59e-09;51!DOID:1240;3.05e-09;39!DOID:8692;5.74e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,8.08e-15,51;DOID:0060083,8.08e-15,51;DOID:1240,1.73e-11,39;DOID:8692,3.45e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!6.93e-39!102;UBERON:0003061!6.93e-39!102;UBERON:0002193!1.81e-33!112;UBERON:0002371!5.70e-30!80;UBERON:0001474!7.86e-25!86;UBERON:0002405!3.94e-23!115;UBERON:0004765!1.35e-15!101;UBERON:0001434!1.35e-15!101;UBERON:0000178!6.46e-07!15;UBERON:0000179!6.46e-07!15;UBERON:0000463!6.46e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.30e-07;15!UBERON:0000179;1.30e-07;15!UBERON:0000463;1.30e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.18e-44,98;UBERON:0003061,3.18e-44,98;UBERON:0002193,3.62e-38,108;UBERON:0002371,3.46e-34,76;UBERON:0002405,3.13e-31,93;UBERON:0001474,3.81e-29,82;UBERON:0004765,1.32e-23,90;UBERON:0001434,3.86e-18,100;UBERON:0002384,2.68e-11,371;UBERON:0000178,1.32e-07,15;UBERON:0000179,1.32e-07,15;UBERON:0000463,1.32e-07,15;UBERON:0003081,2.77e-07,203 | |||
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| ||
|short_description=p1@KCNAB2 | |short_description=p1@KCNAB2 | ||
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Latest revision as of 18:01, 18 September 2015
Short description: | p1@KCNAB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KCNAB2_5end |
Coexpression cluster: | C2595_Melanocyte_granulocyte_Monocytederived_CD14_acute_CD4_Macrophage |
Association with transcript: | 5bp_to_ENST00000341524, ENST00000352527, ENST00000378087, uc001alu.2, uc001alv.1, uc001alw.1_5end |
EntrezGene: | KCNAB2 |
HGNC: | 6229 |
UniProt: | Q13303E7ESI4Q2YD85B0AZR7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.18e-44 | 98 |
blood island | 3.18e-44 | 98 |
hemolymphoid system | 3.62e-38 | 108 |
bone marrow | 3.46e-34 | 76 |
immune system | 3.13e-31 | 93 |
bone element | 3.81e-29 | 82 |
skeletal element | 1.32e-23 | 90 |
skeletal system | 3.86e-18 | 100 |
connective tissue | 2.68e-11 | 371 |
blood | 1.32e-07 | 15 |
haemolymphatic fluid | 1.32e-07 | 15 |
organism substance | 1.32e-07 | 15 |
lateral plate mesoderm | 2.77e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 8.08e-15 | 51 |
immune system cancer | 8.08e-15 | 51 |
leukemia | 1.73e-11 | 39 |
myeloid leukemia | 3.45e-08 | 31 |