FFCP PHASE1:Hg19::chr11:66103867..66103923,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:66103867..66103923,-
|short_description=p1@RIN1
|description=CAGE_peak_1_at_RIN1_5end
|association_with_transcript=0bp_to_ENST00000424433,ENST00000530745_...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9610 | |EntrezGene=9610 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18749 | |HGNC=18749 | ||
|UniProt=E7EM96, | |TSSclassifier=strong | ||
|UniProt=E7EM96,E9PMB8 | |||
|association_with_transcript=0bp_to_ENST00000424433,ENST00000530745_5end | |||
|cluster_id=chr11:66103867..66103923,- | |||
|description=CAGE_peak_1_at_RIN1_5end | |||
|id=chr11:66103867..66103923,- | |||
|ontology_enrichment_celltype=CL:0000055!4.46e-24!180;CL:0000548!1.06e-18!679;CL:0000004!1.06e-18!679;CL:0000255!1.06e-18!679;CL:0002371!2.09e-18!591;CL:0000012!1.14e-17!682;CL:0000220!2.09e-16!246;CL:0000144!3.09e-16!625;CL:0002321!1.05e-15!248;CL:0000183!1.19e-13!59;CL:0000057!3.46e-13!75;CL:0000680!2.17e-12!57;CL:0000056!2.17e-12!57;CL:0000355!2.17e-12!57;CL:0000187!2.61e-12!54;CL:0000192!4.01e-11!42;CL:0000514!4.01e-11!42;CL:0000359!4.36e-10!32;CL:0000393!4.56e-10!60;CL:0000211!4.56e-10!60;CL:0000222!1.93e-09!119;CL:0000003!2.72e-09!722;CL:0002620!2.73e-08!23;CL:0002076!1.08e-07!43;CL:0000066!1.60e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.33e-09;32!CL:0000192;9.14e-09;43!CL:0002620;2.45e-08;23!CL:0000187;3.27e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,4.17e-16,250;CL:0000680,8.67e-13,58;CL:0000056,8.67e-13,58;CL:0000355,8.67e-13,58;CL:0000057,9.61e-13,76;CL:0000187,1.03e-12,55;CL:0000192,1.58e-11,43;CL:0000514,1.58e-11,43;CL:0000393,1.96e-10,61;CL:0000211,1.96e-10,61;CL:0000359,4.19e-10,32;CL:0000222,7.97e-10,121;CL:0002620,2.65e-08,23;CL:0002076,1.85e-07,42;CL:0000066,2.78e-07,253 | |||
|ontology_enrichment_development_v019=CL:0000514;9.14e-09;43!CL:0000355;1.92e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000467!1.79e-17!625;UBERON:0000480!4.13e-17!626;UBERON:0000914!2.71e-16!83;UBERON:0002329!2.71e-16!83;UBERON:0003077!2.71e-16!83;UBERON:0003059!2.71e-16!83;UBERON:0007282!2.71e-16!83;UBERON:0009618!2.71e-16!83;UBERON:0007285!2.71e-16!83;UBERON:0000468!4.74e-16!659;UBERON:0000486!2.71e-15!82;UBERON:0003102!7.49e-15!95;UBERON:0000923!1.44e-14!604;UBERON:0005291!1.44e-14!604;UBERON:0006598!1.44e-14!604;UBERON:0002532!1.44e-14!604;UBERON:0002050!1.93e-14!605;UBERON:0005423!1.93e-14!605;UBERON:0004290!3.11e-14!70;UBERON:0002204!2.88e-13!167;UBERON:0000922!4.74e-13!612;UBERON:0000926!2.01e-12!448;UBERON:0004120!2.01e-12!448;UBERON:0006603!2.01e-12!448;UBERON:0001134!2.82e-11!61;UBERON:0002036!2.82e-11!61;UBERON:0003082!2.82e-11!61;UBERON:0005256!4.04e-11!143;UBERON:0002385!1.83e-10!63;UBERON:0001015!1.83e-10!63;UBERON:0000383!1.83e-10!63;UBERON:0002199!5.77e-10!45;UBERON:0002416!5.77e-10!45;UBERON:0002097!1.58e-09!40;UBERON:0000475!1.75e-09!365;UBERON:0001637!2.07e-09!42;UBERON:0003509!2.07e-09!42;UBERON:0004572!2.07e-09!42;UBERON:0003104!2.40e-09!238;UBERON:0009142!2.40e-09!238;UBERON:0004573!2.37e-08!33;UBERON:0004571!2.37e-08!33;UBERON:0000481!2.71e-08!347;UBERON:0002100!3.39e-08!216;UBERON:0000062!8.95e-08!511;UBERON:0002049!9.65e-07!79;UBERON:0007798!9.65e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.07e-07;41!UBERON:0004573;1.31e-07;33!UBERON:0004571;1.31e-07;33!UBERON:0003102;1.54e-07;50!UBERON:0002199;5.56e-07;46!UBERON:0002416;5.56e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000486,1.07e-15,83;UBERON:0007503,2.48e-15,78;UBERON:0003102,6.94e-15,99;UBERON:0007524,1.12e-14,73;UBERON:0002329,1.23e-14,71;UBERON:0003059,1.23e-14,71;UBERON:0007282,1.23e-14,71;UBERON:0004290,1.23e-14,71;UBERON:0009618,1.23e-14,71;UBERON:0003077,2.18e-14,72;UBERON:0007285,2.18e-14,72;UBERON:0002204,3.34e-14,167;UBERON:0001134,1.18e-11,62;UBERON:0002036,1.18e-11,62;UBERON:0003082,1.18e-11,62;UBERON:0002385,7.85e-11,64;UBERON:0001015,7.85e-11,64;UBERON:0000383,7.85e-11,64;UBERON:0005423,1.42e-10,581;UBERON:0000922,3.36e-10,592;UBERON:0002199,3.65e-10,46;UBERON:0002416,3.65e-10,46;UBERON:0002050,4.08e-10,564;UBERON:0000923,4.52e-10,560;UBERON:0010316,4.52e-10,560;UBERON:0005291,4.52e-10,560;UBERON:0006598,4.52e-10,560;UBERON:0010317,4.52e-10,560;UBERON:0002532,4.52e-10,560;UBERON:0002097,1.00e-09,41;UBERON:0003104,1.65e-09,160;UBERON:0009142,1.65e-09,160;UBERON:0001637,1.99e-09,42;UBERON:0003509,1.99e-09,42;UBERON:0004572,1.99e-09,42;UBERON:0005256,4.18e-09,122;UBERON:0000926,6.77e-09,315;UBERON:0004120,6.77e-09,315;UBERON:0006603,6.77e-09,315;UBERON:0004573,2.30e-08,33;UBERON:0004571,2.30e-08,33;UBERON:0000490,9.06e-08,148;UBERON:0002100,3.66e-07,199;UBERON:0002049,4.86e-07,78;UBERON:0007798,4.86e-07,78;UBERON:0007500,5.33e-07,59;UBERON:0001981,5.33e-07,59;UBERON:0004537,5.33e-07,59;UBERON:0006965,5.33e-07,59;UBERON:0004872,7.81e-07,83 | |||
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| ||
|short_description=p1@RIN1 | |||
}} | }} |
Latest revision as of 14:05, 19 September 2015
Short description: | p1@RIN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RIN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000424433, ENST00000530745_5end |
EntrezGene: | RIN1 |
HGNC: | 18749 |
UniProt: | E7EM96E9PMB8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 4.17e-16 | 250 |
muscle precursor cell | 8.67e-13 | 58 |
myoblast | 8.67e-13 | 58 |
multi-potent skeletal muscle stem cell | 8.67e-13 | 58 |
fibroblast | 9.61e-13 | 76 |
muscle cell | 1.03e-12 | 55 |
smooth muscle cell | 1.58e-11 | 43 |
smooth muscle myoblast | 1.58e-11 | 43 |
electrically responsive cell | 1.96e-10 | 61 |
electrically active cell | 1.96e-10 | 61 |
vascular associated smooth muscle cell | 4.19e-10 | 32 |
mesodermal cell | 7.97e-10 | 121 |
skin fibroblast | 2.65e-08 | 23 |
endo-epithelial cell | 1.85e-07 | 42 |
epithelial cell | 2.78e-07 | 253 |