FFCP PHASE1:Hg19::chr16:89988312..89988354,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10381 | |EntrezGene=10381 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20772 | |HGNC=20772 | ||
|TSSclassifier=strong | |||
|UniProt=G3V542 | |UniProt=G3V542 | ||
|association_with_transcript=0bp_to_ENST00000556565_5end | |association_with_transcript=0bp_to_ENST00000556565_5end | ||
|cluster_id=chr16:89988312..89988354,+ | |||
|description=CAGE_peak_2_at_TUBB3_5end | |description=CAGE_peak_2_at_TUBB3_5end | ||
|id=chr16:89988312..89988354,+ | |id=chr16:89988312..89988354,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.16e-39!180;CL:0000222!1.64e-32!119;CL:0000220!2.90e-28!246;CL:0002321!5.68e-28!248;CL:0000183!1.14e-21!59;CL:0000548!1.01e-20!679;CL:0000004!1.01e-20!679;CL:0000255!1.01e-20!679;CL:0000012!4.71e-20!682;CL:0000187!4.47e-19!54;CL:0000680!8.36e-19!57;CL:0000056!8.36e-19!57;CL:0000355!8.36e-19!57;CL:0000393!3.04e-18!60;CL:0000211!3.04e-18!60;CL:0000144!3.70e-17!625;CL:0000192!3.69e-15!42;CL:0000514!3.69e-15!42;CL:0002371!1.02e-14!591;CL:0000057!1.94e-14!75;CL:0000213!7.55e-13!57;CL:0000215!7.55e-13!57;CL:0000003!1.00e-12!722;CL:0000359!1.74e-11!32;CL:0002078!1.03e-09!44;CL:0000115!6.77e-09!35;CL:0000066!1.51e-08!254;CL:0000071!5.49e-08!18;CL:0002546!5.49e-08!18;CL:0002139!1.53e-07!24 | |ontology_enrichment_celltype=CL:0000055!1.16e-39!180;CL:0000222!1.64e-32!119;CL:0000220!2.90e-28!246;CL:0002321!5.68e-28!248;CL:0000183!1.14e-21!59;CL:0000548!1.01e-20!679;CL:0000004!1.01e-20!679;CL:0000255!1.01e-20!679;CL:0000012!4.71e-20!682;CL:0000187!4.47e-19!54;CL:0000680!8.36e-19!57;CL:0000056!8.36e-19!57;CL:0000355!8.36e-19!57;CL:0000393!3.04e-18!60;CL:0000211!3.04e-18!60;CL:0000144!3.70e-17!625;CL:0000192!3.69e-15!42;CL:0000514!3.69e-15!42;CL:0002371!1.02e-14!591;CL:0000057!1.94e-14!75;CL:0000213!7.55e-13!57;CL:0000215!7.55e-13!57;CL:0000003!1.00e-12!722;CL:0000359!1.74e-11!32;CL:0002078!1.03e-09!44;CL:0000115!6.77e-09!35;CL:0000066!1.51e-08!254;CL:0000071!5.49e-08!18;CL:0002546!5.49e-08!18;CL:0002139!1.53e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000187;1.43e-12;55!CL:0000192;2.17e-12;43!CL:0000359;6.71e-12;32!CL:0000393;1.13e-10;61!CL:0000211;1.13e-10;61!CL:0000115;1.12e-08;36!CL:0000071;1.59e-08;18!CL:0000213;1.88e-08;58!CL:0000215;1.88e-08;58!CL:0002139;5.86e-08;24!CL:0002078;6.26e-07;45!CL:1000449;7.25e-07;15!CL:0000057;9.72e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.97e-36,121;CL:0002321,1.02e-24,250;CL:0000187,3.07e-21,55;CL:0000680,6.01e-21,58;CL:0000056,6.01e-21,58;CL:0000355,6.01e-21,58;CL:0000393,9.01e-20,61;CL:0000211,9.01e-20,61;CL:0000192,7.99e-17,43;CL:0000514,7.99e-17,43;CL:0000057,2.13e-15,76;CL:0000213,1.66e-14,58;CL:0000215,1.66e-14,58;CL:0000359,2.58e-12,32;CL:0002078,9.88e-11,45;CL:0000115,1.32e-10,36;CL:0000071,8.56e-09,18;CL:0002546,8.56e-09,18;CL:0002139,2.70e-08,24;CL:1000449,5.37e-07,15;CL:0002494,6.50e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;2.17e-12;43!CL:0000355;8.24e-12;58!CL:0000222;2.61e-10;121!CL:0002546;1.59e-08;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!6.29e-23!79;UBERON:0007798!6.29e-23!79;UBERON:0003914!4.57e-21!118;UBERON:0000119!7.22e-20!312;UBERON:0000483!3.45e-19!309;UBERON:0004535!7.26e-19!110;UBERON:0000055!8.09e-19!69;UBERON:0004872!1.68e-18!84;UBERON:0001009!4.36e-18!113;UBERON:0001981!6.51e-18!60;UBERON:0007500!6.51e-18!60;UBERON:0004537!6.51e-18!60;UBERON:0006965!6.51e-18!60;UBERON:0005256!2.99e-17!143;UBERON:0000914!7.94e-17!83;UBERON:0002329!7.94e-17!83;UBERON:0003077!7.94e-17!83;UBERON:0003059!7.94e-17!83;UBERON:0007282!7.94e-17!83;UBERON:0009618!7.94e-17!83;UBERON:0007285!7.94e-17!83;UBERON:0000490!1.38e-16!138;UBERON:0004290!1.42e-16!70;UBERON:0002100!1.60e-16!216;UBERON:0001637!6.31e-16!42;UBERON:0003509!6.31e-16!42;UBERON:0004572!6.31e-16!42;UBERON:0000475!1.77e-15!365;UBERON:0001134!2.01e-15!61;UBERON:0002036!2.01e-15!61;UBERON:0003082!2.01e-15!61;UBERON:0000486!2.62e-15!82;UBERON:0002385!2.79e-14!63;UBERON:0001015!2.79e-14!63;UBERON:0000383!2.79e-14!63;UBERON:0000477!3.47e-14!286;UBERON:0000025!2.08e-13!194;UBERON:0004111!9.23e-13!241;UBERON:0000481!3.01e-12!347;UBERON:0004573!9.58e-12!33;UBERON:0004571!9.58e-12!33;UBERON:0003104!3.99e-11!238;UBERON:0009142!3.99e-11!238;UBERON:0000468!4.88e-10!659;UBERON:0000480!8.84e-10!626;UBERON:0000467!1.21e-09!625;UBERON:0000487!1.64e-09!22;UBERON:0006914!3.47e-09!25;UBERON:0001986!5.49e-08!18;UBERON:0004638!5.49e-08!18;UBERON:0004852!5.49e-08!18;UBERON:0000923!1.18e-07!604;UBERON:0005291!1.18e-07!604;UBERON:0006598!1.18e-07!604;UBERON:0002532!1.18e-07!604;UBERON:0000947!1.31e-07!21;UBERON:0010191!1.31e-07!21;UBERON:0002050!1.84e-07!605;UBERON:0005423!1.84e-07!605;UBERON:0000922!7.07e-07!612;UBERON:0000926!7.58e-07!448;UBERON:0004120!7.58e-07!448;UBERON:0006603!7.58e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0007500;1.98e-12;56!UBERON:0001981;1.98e-12;56!UBERON:0004537;1.98e-12;56!UBERON:0001637;4.53e-12;42!UBERON:0003509;4.53e-12;42!UBERON:0004572;4.53e-12;42!UBERON:0003914;1.57e-11;74!UBERON:0004573;5.12e-11;33!UBERON:0004571;5.12e-11;33!UBERON:0002049;1.13e-10;75!UBERON:0007798;1.13e-10;75!UBERON:0000487;2.88e-10;22!UBERON:0000055;4.80e-10;65!UBERON:0006914;2.27e-09;25!UBERON:0004638;1.59e-08;18!UBERON:0001986;1.59e-08;18!UBERON:0004852;1.59e-08;18!UBERON:0000025;1.69e-08;93!UBERON:0000947;1.33e-07;21!UBERON:0010191;1.33e-07;21!UBERON:0000353;3.76e-07;15!UBERON:0006555;7.25e-07;15!UBERON:0004819;7.25e-07;15!UBERON:0001285;7.25e-07;15!UBERON:0007684;7.25e-07;15!UBERON:0001009;8.04e-07;112 | |||
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| ||
|short_description=p2@TUBB3 | |short_description=p2@TUBB3 | ||
}} | }} |
Latest revision as of 13:01, 18 September 2015
Short description: | p2@TUBB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TUBB3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000556565_5end |
EntrezGene: | TUBB3 |
HGNC: | 20772 |
UniProt: | G3V542 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.97e-36 | 121 |
embryonic cell | 1.02e-24 | 250 |
muscle cell | 3.07e-21 | 55 |
muscle precursor cell | 6.01e-21 | 58 |
myoblast | 6.01e-21 | 58 |
multi-potent skeletal muscle stem cell | 6.01e-21 | 58 |
electrically responsive cell | 9.01e-20 | 61 |
electrically active cell | 9.01e-20 | 61 |
smooth muscle cell | 7.99e-17 | 43 |
smooth muscle myoblast | 7.99e-17 | 43 |
fibroblast | 2.13e-15 | 76 |
lining cell | 1.66e-14 | 58 |
barrier cell | 1.66e-14 | 58 |
vascular associated smooth muscle cell | 2.58e-12 | 32 |
meso-epithelial cell | 9.88e-11 | 45 |
endothelial cell | 1.32e-10 | 36 |
blood vessel endothelial cell | 8.56e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.56e-09 | 18 |
endothelial cell of vascular tree | 2.70e-08 | 24 |
epithelial cell of nephron | 5.37e-07 | 15 |
cardiocyte | 6.50e-07 | 16 |