FFCP PHASE1:Hg19::chr17:1675195..1675214,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:1675195..1675214,+ | |||
|description=CAGE_peak_at_chr17:1675195..1675214,+ | |description=CAGE_peak_at_chr17:1675195..1675214,+ | ||
|id=chr17:1675195..1675214,+ | |id=chr17:1675195..1675214,+ | ||
|ontology_enrichment_celltype=CL:0000453!5.19e-08!5;CL:0000451!6.34e-08!10 | |ontology_enrichment_celltype=CL:0000453!5.19e-08!5;CL:0000451!6.34e-08!10 | ||
|ontology_enrichment_celltype_v019=CL:0000451;1.06e-35;10!CL:0000453;1.13e-31;5!CL:0000990;6.56e-25;8!CL:0002619;5.76e-20;3!CL:0000784;1.35e-19;3!CL:0001014;4.85e-14;2!CL:0001016;4.85e-14;2!CL:0000840;3.09e-10;5!CL:0000235;1.78e-09;6!CL:0002621;4.32e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000451,1.11e-35,10;CL:0000453,1.24e-31,5;CL:0000990,6.99e-25,8;CL:0002619,5.77e-20,3;CL:0000784,1.31e-19,3;CL:0001014,4.85e-14,2;CL:0001016,4.85e-14,2;CL:0000840,3.09e-10,5;CL:0001029,3.09e-10,5;CL:0000235,2.32e-09,6;CL:0002621,3.98e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0007297;6.05e-13;2!UBERON:0009143;1.42e-07;1!UBERON:0005754;1.95e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.38e-15!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;8.59e-19;3!UBERON:0004054;8.59e-19;3!UBERON:0005904;3.08e-14;4!UBERON:0001896;4.32e-09;3!UBERON:0001949;4.32e-09;3!UBERON:0005290;4.32e-09;3!UBERON:0001000;1.42e-07;1!UBERON:0005352;1.42e-07;1!UBERON:0000998;1.95e-07;1!UBERON:0006868;1.95e-07;1!UBERON:0002372;3.51e-07;1!UBERON:0002135;3.51e-07;1!UBERON:0001301;3.51e-07;1!UBERON:0001961;3.51e-07;1!UBERON:0001744;3.51e-07;1!UBERON:0001042;3.51e-07;1!UBERON:0001735;3.51e-07;1!UBERON:0004175;6.17e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.00e-18,3;UBERON:0004054,1.00e-18,3;UBERON:0005904,3.45e-14,4;UBERON:0001949,3.98e-09,3;UBERON:0001896,4.15e-09,3;UBERON:0005290,4.15e-09,3;UBERON:0010096,4.15e-09,3;UBERON:0001000,1.42e-07,1;UBERON:0005352,1.42e-07,1;UBERON:0007023,1.58e-07,114;UBERON:0000998,1.83e-07,1;UBERON:0006868,1.83e-07,1;UBERON:0002135,2.50e-07,1;UBERON:0002372,2.66e-07,1;UBERON:0001961,2.66e-07,1;UBERON:0001744,2.66e-07,1;UBERON:0001735,2.66e-07,1;UBERON:0001301,4.34e-07,1 | |||
|phase1_expression=0.363356758541113,0.856402095563933,0,0,0.893922188854576,0.872338524100369,0,0,0.261185628199839,0,0,0,0,0,0.331397375727916,0,0,0,0.487932798790507,0,0,0,0,0,0.125542639594803,0,0,0,0,0.383829398097213,0.464448369948228,0,0,0.369754010166788,0,0,0,0,0,0,15.2262522483149,15.87078963493,21.6363476812717,0.290796477559129,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0.398927315243264,0.852449501065388,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0.795285947051099,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,9.77811559651902,11.4398982156026,8.17206502925043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0.151357427644931,0,0.234321431833797,0.312160076830321,0,0.149448680551801,0,0.161872944368132,0,0,0.122834317311768,0.103325781175765,0,0,0,0.718618141816238,0,0.125118519871964,0,0.438977620880838,0.30648779579902,0,0,0,0,0,0,0.206105058476878,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0,0,2.51239109112286,0.272746120590835,2.58124135850103,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0.982827216677626,0.590789906681404,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.445893486866185,0,0,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0,0.190493682876507,0,0,0,0,0.300343057843917,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,1.2162378064119,1.00451418286425,2.10833939483032,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0.415941723061614,0.178428988797162,0,0.117141414992713,0.300946099727719,0,0,0,0,0.173767228936166,0.195801157462741,0.343143423810856,0.413536052245775,0.215714200818617,0.213455115606889,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0.116210378459959,0,0.200506470303285,0,0,0.182091168006717,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0.325378394664303,0.412164046590889,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0.107420244868274,0.435050081742686,0,0.267096106940212,0.330569830721956,0,0,0.2023155617111,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0.329294892959902,0.75894634753143,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.278304294485554,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,1.52581736317083,0,0,0.219385397153973,0,0,1.46205491157214,0,0,0,0,0,0.366390373607449,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.067401132980677,0,0,0,0,0,3.15667522279512,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,3.10364852762942,0.264768380074501,1.35588444468319,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,1.95497680890578,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0.157566364614447,0.412079291905832,0.26961417541674,0,0,0,0.272406812223151,0,0,0,31.2713709256586,33.2734840459918,0,0,0.0788057072991982,0,0,0,0,0,0,0,1.08599920350743,0,0,0,0,0,0,0.439656701034247,0,0.517131825446202,0,0,0,0.427149650270779,0,0.828478110694391,0.992332043623902,0,0,0,0,0,0,0.655745261419609,0,0,0.244052529803926,0,2.86704597845036,2.21858103073705,0.124192805882767,0.138348634936231,0,0.151649117541648,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0.302461847526478,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7173169861664,11.1606465863225,2.28991551958182,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,1.41696576325585,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,0,0.781078098613847,0.206686796501184,0,0,0,0.992422356778588,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,34.952030102385,0,0,0,0,0,0,0,0,0,0,2.54032230114557,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0.245148321753905,0,0.196308467114945,0.297046400327086,0,0.169927114687817,0.187967835959707,0,0,0,0,0,0,0.458729283404541,0.430018749454354,0,0.0679914901909147,0,0,0.371995018166751,0,0.432626562123789,0,0.109265571963696,0,0,0,0,0,0.833565680400634,0.267964130156178,0,0.310298987585686,0.213233981900981,0,0.581300188524055,0.620747142958579,0,0.190941474834495,0,1.08858373948481,0,1.6164492723501,0.430333232356058,0,0,0,0,0,0,0,0,0,1.00636896795513,0 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|phase1_expression=0.363356758541113,0.856402095563933,0,0,0.893922188854576,0.872338524100369,0,0,0.261185628199839,0,0,0,0,0,0.331397375727916,0,0,0,0.487932798790507,0,0,0,0,0,0.125542639594803,0,0,0,0,0.383829398097213,0.464448369948228,0,0,0.369754010166788,0,0,0,0,0,0,15.2262522483149,15.87078963493,21.6363476812717,0.290796477559129,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0.398927315243264,0.852449501065388,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0.795285947051099,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,9.77811559651902,11.4398982156026,8.17206502925043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0.151357427644931,0,0.234321431833797,0.312160076830321,0,0.149448680551801,0,0.161872944368132,0,0,0.122834317311768,0.103325781175765,0,0,0,0.718618141816238,0,0.125118519871964,0,0.438977620880838,0.30648779579902,0,0,0,0,0,0,0.206105058476878,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0,0,2.51239109112286,0.272746120590835,2.58124135850103,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0.982827216677626,0.590789906681404,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.445893486866185,0,0,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0,0.190493682876507,0,0,0,0,0.300343057843917,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,1.2162378064119,1.00451418286425,2.10833939483032,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0.415941723061614,0.178428988797162,0,0.117141414992713,0.300946099727719,0,0,0,0,0.173767228936166,0.195801157462741,0.343143423810856,0.413536052245775,0.215714200818617,0.213455115606889,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0.116210378459959,0,0.200506470303285,0,0,0.182091168006717,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0.325378394664303,0.412164046590889,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0.107420244868274,0.435050081742686,0,0.267096106940212,0.330569830721956,0,0,0.2023155617111,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0.329294892959902,0.75894634753143,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.278304294485554,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,1.52581736317083,0,0,0.219385397153973,0,0,1.46205491157214,0,0,0,0,0,0.366390373607449,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.067401132980677,0,0,0,0,0,3.15667522279512,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,3.10364852762942,0.264768380074501,1.35588444468319,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,1.95497680890578,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0.157566364614447,0.412079291905832,0.26961417541674,0,0,0,0.272406812223151,0,0,0,31.2713709256586,33.2734840459918,0,0,0.0788057072991982,0,0,0,0,0,0,0,1.08599920350743,0,0,0,0,0,0,0.439656701034247,0,0.517131825446202,0,0,0,0.427149650270779,0,0.828478110694391,0.992332043623902,0,0,0,0,0,0,0.655745261419609,0,0,0.244052529803926,0,2.86704597845036,2.21858103073705,0.124192805882767,0.138348634936231,0,0.151649117541648,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0.302461847526478,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7173169861664,11.1606465863225,2.28991551958182,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,1.41696576325585,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,0,0.781078098613847,0.206686796501184,0,0,0,0.992422356778588,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,34.952030102385,0,0,0,0,0,0,0,0,0,0,2.54032230114557,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0.245148321753905,0,0.196308467114945,0.297046400327086,0,0.169927114687817,0.187967835959707,0,0,0,0,0,0,0.458729283404541,0.430018749454354,0,0.0679914901909147,0,0,0.371995018166751,0,0.432626562123789,0,0.109265571963696,0,0,0,0,0,0.833565680400634,0.267964130156178,0,0.310298987585686,0.213233981900981,0,0.581300188524055,0.620747142958579,0,0.190941474834495,0,1.08858373948481,0,1.6164492723501,0.430333232356058,0,0,0,0,0,0,0,0,0,1.00636896795513,0 | ||
|short_description=p@chr17:1675195..1675214,+ | |short_description=p@chr17:1675195..1675214,+ | ||
}} | }} |
Latest revision as of 14:14, 25 July 2015
Short description: | p@chr17:1675195..1675214, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:1675195..1675214, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
dendritic cell | 1.11e-35 | 10 |
Langerhans cell | 1.24e-31 | 5 |
conventional dendritic cell | 6.99e-25 | 8 |
adult endothelial progenitor cell | 5.77e-20 | 3 |
plasmacytoid dendritic cell | 1.31e-19 | 3 |
CD1a-positive Langerhans cell | 4.85e-14 | 2 |
immature CD1a-positive Langerhans cell | 4.85e-14 | 2 |
immature conventional dendritic cell | 3.09e-10 | 5 |
common dendritic progenitor | 3.09e-10 | 5 |
macrophage | 2.32e-09 | 6 |
gingival epithelial cell | 3.98e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.00e-18 | 3 |
internal male genitalia | 1.00e-18 | 3 |
duct of male reproductive system | 3.45e-14 | 4 |
gingival epithelium | 3.98e-09 | 3 |
medulla oblongata | 4.15e-09 | 3 |
myelencephalon | 4.15e-09 | 3 |
future myelencephalon | 4.15e-09 | 3 |
vas deferens | 1.42e-07 | 1 |
spermatic cord | 1.42e-07 | 1 |
adult organism | 1.58e-07 | 114 |
seminal vesicle | 1.83e-07 | 1 |
seminal fluid secreting gland | 1.83e-07 | 1 |
mitral valve | 2.50e-07 | 1 |
tonsil | 2.66e-07 | 1 |
mucosa-associated lymphoid tissue | 2.66e-07 | 1 |
lymphoid tissue | 2.66e-07 | 1 |
tonsillar ring | 2.66e-07 | 1 |
epididymis | 4.34e-07 | 1 |