FFCP PHASE1:Hg19::chr17:56065484..56065497,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7716 | |EntrezGene=7716 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12949 | |HGNC=12949 | ||
|TSSclassifier=strong | |||
|UniProt=Q14119 | |UniProt=Q14119 | ||
|association_with_transcript=117bp_to_ENST00000258963,NM_007146,uc002ivf.1_5end | |association_with_transcript=117bp_to_ENST00000258963,NM_007146,uc002ivf.1_5end | ||
|cluster_id=chr17:56065484..56065497,- | |||
|description=CAGE_peak_3_at_VEZF1_5end | |description=CAGE_peak_3_at_VEZF1_5end | ||
|id=chr17:56065484..56065497,- | |id=chr17:56065484..56065497,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!2.47e-07!143 | |ontology_enrichment_disease=DOID:0050687!2.47e-07!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.67e-08!94;UBERON:0001016!1.67e-08!94;UBERON:0001017!5.94e-08!82;UBERON:0005743!1.35e-07!86;UBERON:0000924!1.96e-07!173;UBERON:0006601!1.96e-07!173;UBERON:0007023!1.99e-07!115;UBERON:0004121!3.26e-07!169;UBERON:0001049!3.59e-07!57;UBERON:0005068!3.59e-07!57;UBERON:0006241!3.59e-07!57;UBERON:0007135!3.59e-07!57 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.88e-11,171;UBERON:0000924,1.88e-11,171;UBERON:0006601,1.88e-11,171;UBERON:0001017,1.03e-10,81;UBERON:0001016,1.29e-10,89;UBERON:0001049,2.11e-09,56;UBERON:0005068,2.11e-09,56;UBERON:0006241,2.11e-09,56;UBERON:0007135,2.11e-09,56;UBERON:0002346,2.37e-09,86;UBERON:0003075,5.60e-09,82;UBERON:0007284,5.60e-09,82;UBERON:0011216,7.02e-09,223;UBERON:0000073,1.42e-08,53;UBERON:0002616,1.42e-08,53;UBERON:0010371,8.29e-08,104;UBERON:0000955,1.18e-07,68;UBERON:0006238,1.18e-07,68;UBERON:0002780,2.92e-07,41;UBERON:0001890,2.92e-07,41;UBERON:0003080,2.92e-07,41;UBERON:0006240,2.92e-07,41;UBERON:0003056,5.81e-07,61;UBERON:0007023,8.26e-07,114 | |||
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| ||
|short_description=p3@VEZF1 | |short_description=p3@VEZF1 | ||
}} | }} |
Latest revision as of 09:44, 16 September 2015
Short description: | p3@VEZF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_VEZF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 117bp_to_ENST00000258963, NM_007146, uc002ivf.1_5end |
EntrezGene: | VEZF1 |
HGNC: | 12949 |
UniProt: | Q14119 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.88e-11 | 171 |
ectoderm | 1.88e-11 | 171 |
presumptive ectoderm | 1.88e-11 | 171 |
central nervous system | 1.03e-10 | 81 |
nervous system | 1.29e-10 | 89 |
neural tube | 2.11e-09 | 56 |
neural rod | 2.11e-09 | 56 |
future spinal cord | 2.11e-09 | 56 |
neural keel | 2.11e-09 | 56 |
neurectoderm | 2.37e-09 | 86 |
neural plate | 5.60e-09 | 82 |
presumptive neural plate | 5.60e-09 | 82 |
organ system subdivision | 7.02e-09 | 223 |
regional part of nervous system | 1.42e-08 | 53 |
regional part of brain | 1.42e-08 | 53 |
ecto-epithelium | 8.29e-08 | 104 |
brain | 1.18e-07 | 68 |
future brain | 1.18e-07 | 68 |
regional part of forebrain | 2.92e-07 | 41 |
forebrain | 2.92e-07 | 41 |
anterior neural tube | 2.92e-07 | 41 |
future forebrain | 2.92e-07 | 41 |
pre-chordal neural plate | 5.81e-07 | 61 |
adult organism | 8.26e-07 | 114 |