FFCP PHASE1:Hg19::chr11:85430204..85430243,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:85430204..85430243,-
|short_description=p5@SYTL2
|description=CAGE_peak_5_at_SYTL2_5end
|association_with_transcript=0bp_to_ENST00000389958,ENST0000052856...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54843 | |EntrezGene=54843 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15585 | |HGNC=15585 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HCH5 | |UniProt=Q9HCH5 | ||
|association_with_transcript=0bp_to_ENST00000389958,ENST00000528566,ENST00000534554_5end | |||
|cluster_id=chr11:85430204..85430243,- | |||
|coexpression_cluster_id=C3209 | |||
|description=CAGE_peak_5_at_SYTL2_5end | |||
|id=chr11:85430204..85430243,- | |||
|ontology_enrichment_celltype=CL:0000055!7.75e-16!180;CL:0000057!6.69e-08!75;CL:0002620!3.75e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.78e-10;23!CL:0000188;6.38e-09;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.58e-10,23;CL:0000188,1.02e-08,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:120!5.11e-07!27 | |||
|ontology_enrichment_disease_v019=DOID:17;1.20e-07;5!DOID:450;1.20e-07;5!DOID:66;1.20e-07;5!DOID:423;1.20e-07;5!DOID:0080000;1.20e-07;5!DOID:11722;1.20e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,8.57e-08,5;DOID:450,8.57e-08,5;DOID:66,8.57e-08,5;DOID:423,8.57e-08,5;DOID:0080000,8.57e-08,5;DOID:11722,8.57e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0000475!3.05e-18!365;UBERON:0001017!1.07e-16!82;UBERON:0005743!2.37e-16!86;UBERON:0000073!1.58e-15!94;UBERON:0001016!1.58e-15!94;UBERON:0007023!4.35e-15!115;UBERON:0001893!4.39e-13!34;UBERON:0001049!4.47e-13!57;UBERON:0005068!4.47e-13!57;UBERON:0006241!4.47e-13!57;UBERON:0007135!4.47e-13!57;UBERON:0001869!5.60e-13!32;UBERON:0000956!1.24e-12!25;UBERON:0000203!1.24e-12!25;UBERON:0000955!1.28e-12!69;UBERON:0006238!1.28e-12!69;UBERON:0002020!1.38e-12!34;UBERON:0003528!1.38e-12!34;UBERON:0003075!1.69e-12!86;UBERON:0007284!1.69e-12!86;UBERON:0002791!2.20e-12!33;UBERON:0000483!2.53e-12!309;UBERON:0002616!5.19e-12!59;UBERON:0000119!8.74e-12!312;UBERON:0004121!1.47e-11!169;UBERON:0002619!2.66e-11!22;UBERON:0002346!4.55e-11!90;UBERON:0002780!7.76e-11!41;UBERON:0001890!7.76e-11!41;UBERON:0006240!7.76e-11!41;UBERON:0000481!1.12e-10!347;UBERON:0000924!1.21e-10!173;UBERON:0006601!1.21e-10!173;UBERON:0003080!2.68e-10!42;UBERON:0001950!2.85e-10!20;UBERON:0000153!1.95e-09!129;UBERON:0007811!1.95e-09!129;UBERON:0000033!3.70e-09!123;UBERON:0000467!6.80e-09!625;UBERON:0000468!7.15e-09!659;UBERON:0000480!9.14e-09!626;UBERON:0003056!2.56e-08!61;UBERON:0000477!7.92e-08!286;UBERON:0000025!3.35e-07!194;UBERON:0000914!4.36e-07!83;UBERON:0002329!4.36e-07!83;UBERON:0003077!4.36e-07!83;UBERON:0003059!4.36e-07!83;UBERON:0007282!4.36e-07!83;UBERON:0009618!4.36e-07!83;UBERON:0007285!4.36e-07!83;UBERON:0004111!6.00e-07!241;UBERON:0002385!7.56e-07!63;UBERON:0001015!7.56e-07!63;UBERON:0000383!7.56e-07!63;UBERON:0005256!9.71e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;5.86e-19;25!UBERON:0000203;5.86e-19;25!UBERON:0002619;2.51e-18;22!UBERON:0001869;2.73e-17;32!UBERON:0001950;2.07e-16;20!UBERON:0001893;1.38e-15;34!UBERON:0002791;2.21e-15;32!UBERON:0003528;5.54e-14;34!UBERON:0002020;5.54e-14;34!UBERON:0002780;2.16e-09;41!UBERON:0001890;2.16e-09;41!UBERON:0000200;5.39e-09;6!UBERON:0002097;1.45e-07;41!UBERON:0001017;5.16e-07;75!UBERON:0000349;9.44e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,5.68e-19,25;UBERON:0000203,5.68e-19,25;UBERON:0001869,1.10e-18,32;UBERON:0002619,2.81e-18,22;UBERON:0001893,3.60e-17,34;UBERON:0002791,9.52e-17,32;UBERON:0001950,1.74e-16,20;UBERON:0001017,3.01e-16,81;UBERON:0003528,2.25e-15,34;UBERON:0002020,2.25e-15,34;UBERON:0001016,3.28e-15,89;UBERON:0002780,4.69e-13,41;UBERON:0001890,4.69e-13,41;UBERON:0003080,4.69e-13,41;UBERON:0006240,4.69e-13,41;UBERON:0000955,1.56e-12,68;UBERON:0006238,1.56e-12,68;UBERON:0001049,2.20e-11,56;UBERON:0005068,2.20e-11,56;UBERON:0006241,2.20e-11,56;UBERON:0007135,2.20e-11,56;UBERON:0000073,2.38e-10,53;UBERON:0002616,2.38e-10,53;UBERON:0003056,4.12e-10,61;UBERON:0003075,1.22e-09,82;UBERON:0007284,1.22e-09,82;UBERON:0002097,2.00e-09,41;UBERON:0010314,3.08e-09,132;UBERON:0000200,5.53e-09,6;UBERON:0010371,7.46e-09,104;UBERON:0004121,8.08e-09,171;UBERON:0000924,8.08e-09,171;UBERON:0006601,8.08e-09,171;UBERON:0002346,8.82e-09,86;UBERON:0002199,8.77e-08,46;UBERON:0002416,8.77e-08,46;UBERON:0007023,5.53e-07,114;UBERON:0000349,7.74e-07,5;UBERON:0001871,8.28e-07,6 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0,0,0.245733936501509,0,0,0,0.618831764800233,0.331397375727916,0.672325146451775,0,0.730310090387373,0.975865597581014,0.492484232307152,0.204000691244253,0.940364164434263,1.43117993565528,1.36874425072884,0.87879847716362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40648818027883,0.722878304769133,2.00535164254356,0.724232594804119,0,0,2.45790524626576,0.443458794925128,0.087834785693126,1.17881167947941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66944122552934,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,6.3556406790345,0.573673241497627,0.354668382198357,1.12135520028461,0,0,0.311211035399766,0,0,0,0,0,0.312160076830321,0,0,0.352303495931295,0,0,0.408308342509787,0.61417158655884,0.309977343527296,0,0.741800787835671,0.910161361938026,0,0,0.375355559615893,1.93944880838928,0.438977620880838,0.919463387397059,0.45071417671979,0.340296549480063,2.15267562826634,10.2507546632912,4.87443372666992,1.80054657650641,3.7098910525838,2.06112432036503,2.23340227597908,2.02531598689519,0.194874010322397,2.52433774244115,8.56064057373384,0,5.68015348026583,2.11579406278045,1.86516651541536,0,0,0,0,0,0,0.207322110030741,0,0,1.56449532329816,1.28648187638577,2.76269842704961,2.3218396401599,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0.590789906681404,0,0,1.3725424823882,0,0,0,0,0,0,0,2.78232971940184,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0.288239906833923,0.12624243342638,0.888970520090367,0,0,0,0.102827492703324,0.300343057843917,1.14330573052231,0,0,0,0.517086863031111,0,0,0,0,0,0,0,1.71573592389777,0,0,0,1.77695974371273,0,0,0,0.299918973546171,0,0,0,0,0,1.42636905040718,0.579125226670317,0.61642896765115,1.25342674267927,0,0,0,0,1.27047312111232,1.30139853857622,0,1.17261385734044,3.82763250991898,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,0.623912584592421,0.356857977594324,0.157702415033935,0.117141414992713,0.300946099727719,0,0,0.664225598535437,0,4.69171518127647,0,0,0,0,0,0,0,0,0.744323423456331,0.153461973288062,0.280660094433074,0.896974044789907,0,0.321707842287215,0,0.771048469013278,0.355123450626254,1.23190734020714,1.55776328755086,0.232420756919918,0,0.200506470303285,0,0.229628896329213,0.728364672026868,0.131124414959424,0.451199612907412,3.46569016969866,0,0,0.211103257785751,0,0,0,0,0,0.501689773854853,0.764628819135115,0.831076008928724,0,0,0,0,0,0.650756789328606,0.412164046590889,2.1060976908219,4.37300349579116,0,0,9.64103579064957,2.22342652071881,1.23238893691716,2.14905144616581,3.03240459465967,0.751941714077915,1.16013355131383,3.06815858697963,8.90320356467373,0,0,0,0,0,1.88887408098384,1.3940745403212,0.308033580176089,1.59691809095107,0.869932992075073,0.37064843820784,0.143124886741991,0.372158369359667,2.53103539774981,1.14378116354295,0.255897791311334,0,0,0,2.87795932133304,0.823611089208164,0.353437207037059,0.606547444719948,0,0.421258456238981,0,0,0,0.272999822815972,0.282810863907425,0,0,0,0.876901770507525,0,0,0.202910376962704,0.30982349809975,0.281695602532241,0,0,0.7133421029625,0,1.68886108238131,0.987884678879706,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.961416640147258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,1.13654458722565,0,0,0,3.97659059106519,1.68803299692615,11.9100314374509,0,0,0.996239941255349,0.552567831062295,0,0.306806047506464,0,1.55519793830904,0.0898683511473268,0,0,0.295930216910801,0,1.11136990144637,2.90799823828566,4.45286871176886,0,0,0,0,0,0,0,0,0,2.60437492399938,1.77148277162768,0.120596438625408,0,0.774054819518572,0,2.63262476584767,0,0,0.769502585037971,2.84855139617503,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,10.3389051618733,1.46909527343233,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0.404406797884062,0.802577647298789,0.468528891450678,0,0,0,0.394584402849391,1.20990716048664,0,1.51647791108371,0,0,0,0,0,0,0.569219092059585,5.96301093956496,1.73559738335131,0,0.783532859223623,3.4945333648406,2.75177651954586,0,0,0,0.581934098930517,0,0.451961481561065,0.274083849293502,0,8.04047108639659,0,0,1.70762395791482,0.19980960958213,0,0,0,0,0,0.235694034616795,11.8236659284044,14.0167814058526,0,1.15580235960608,0,0.410716136675979,0,0,0,2.23425921017803,1.14580212005842,0.717873024576814,0,0.429226048136571,0,0.604651252380536,0.720599767084807,0,0.0787831823072236,0,0,0,0,2.38568906942791,1.0896272488926,0.321506296930038,0.275078873194468,0.83088067605837,0,0,6.68245123238271,0,0.788057072991982,0.0524545881349981,1.05600336519407,2.51002275065983,0,0.714695326373367,0,0,0,0,0,3.59190574687462,0,6.13396878427518,0.113312091520126,0.439656701034247,1.32506888912221,0.387848869084652,0.52893040697076,0.513260513652988,0,0.640724475406168,1.41483874589699,0,0,0,0,0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| ||
|short_description=p5@SYTL2 | |||
}} | }} |
Latest revision as of 21:16, 24 September 2015
Short description: | p5@SYTL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SYTL2_5end |
Coexpression cluster: | C3209_renal_anaplastic_Fibroblast_mesenchymal_clear_mucinous_glioblastoma |
Association with transcript: | 0bp_to_ENST00000389958, ENST00000528566, ENST00000534554_5end |
EntrezGene: | SYTL2 |
HGNC: | 15585 |
UniProt: | Q9HCH5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.58e-10 | 23 |
cell of skeletal muscle | 1.02e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 8.57e-08 | 5 |
myotonic disease | 8.57e-08 | 5 |
muscle tissue disease | 8.57e-08 | 5 |
myopathy | 8.57e-08 | 5 |
muscular disease | 8.57e-08 | 5 |
myotonic dystrophy | 8.57e-08 | 5 |