FFCP PHASE1:Hg19::chr12:125002739..125002756,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:125002739..125002756,-
|short_description=p6@NCOR2
|description=CAGE_peak_6_at_NCOR2_5end
|association_with_transcript=83bp_to_ENST00000420698,uc001ugk.1_...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9612 | |EntrezGene=9612 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7673 | |HGNC=7673 | ||
|TSSclassifier=strong | |||
|UniProt=C9J330 | |UniProt=C9J330 | ||
|association_with_transcript=83bp_to_ENST00000420698,uc001ugk.1_5end | |||
|cluster_id=chr12:125002739..125002756,- | |||
|description=CAGE_peak_6_at_NCOR2_5end | |||
|id=chr12:125002739..125002756,- | |||
|ontology_enrichment_celltype=CL:0000220!8.45e-10!246;CL:0000055!1.34e-09!180;CL:0002321!1.90e-09!248 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!3.46e-23!365;UBERON:0000119!9.44e-19!312;UBERON:0000483!2.79e-18!309;UBERON:0000481!1.05e-15!347;UBERON:0004111!4.47e-15!241;UBERON:0000477!2.99e-14!286;UBERON:0000025!8.32e-13!194;UBERON:0000468!1.55e-12!659;UBERON:0002346!3.40e-12!90;UBERON:0003075!4.13e-12!86;UBERON:0007284!4.13e-12!86;UBERON:0000924!5.74e-12!173;UBERON:0006601!5.74e-12!173;UBERON:0004121!9.04e-12!169;UBERON:0000467!2.11e-11!625;UBERON:0000033!2.57e-11!123;UBERON:0000480!3.53e-11!626;UBERON:0000153!5.33e-11!129;UBERON:0007811!5.33e-11!129;UBERON:0000923!1.85e-09!604;UBERON:0005291!1.85e-09!604;UBERON:0006598!1.85e-09!604;UBERON:0002532!1.85e-09!604;UBERON:0002050!2.94e-09!605;UBERON:0005423!2.94e-09!605;UBERON:0000922!1.53e-08!612;UBERON:0000073!1.77e-08!94;UBERON:0001016!1.77e-08!94;UBERON:0005743!9.63e-08!86;UBERON:0000955!1.53e-07!69;UBERON:0006238!1.53e-07!69;UBERON:0003056!2.57e-07!61;UBERON:0007023!4.38e-07!115;UBERON:0001049!5.72e-07!57;UBERON:0005068!5.72e-07!57;UBERON:0006241!5.72e-07!57;UBERON:0007135!5.72e-07!57;UBERON:0001134!9.53e-07!61;UBERON:0002036!9.53e-07!61;UBERON:0003082!9.53e-07!61 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003075,5.23e-14,82;UBERON:0007284,5.23e-14,82;UBERON:0002346,1.73e-13,86;UBERON:0010371,1.13e-12,104;UBERON:0010314,1.97e-11,132;UBERON:0004121,2.61e-11,171;UBERON:0000924,2.61e-11,171;UBERON:0006601,2.61e-11,171;UBERON:0000119,3.04e-11,309;UBERON:0000483,5.74e-11,306;UBERON:0004111,7.18e-10,240;UBERON:0000025,8.83e-10,192;UBERON:0000955,1.33e-09,68;UBERON:0006238,1.33e-09,68;UBERON:0003056,2.91e-09,61;UBERON:0001016,9.78e-09,89;UBERON:0001017,1.15e-08,81;UBERON:0001049,1.39e-08,56;UBERON:0005068,1.39e-08,56;UBERON:0006241,1.39e-08,56;UBERON:0007135,1.39e-08,56;UBERON:0000073,1.40e-08,53;UBERON:0002616,1.40e-08,53;UBERON:0004732,5.52e-07,13 | |||
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|phase1_expression=1.99846217197612,1.2846031433459,2.39622486963151,1.0007329835313,0.446961094427288,0,0,0,0.261185628199839,0.982935746006035,6.97801167972428,0,0.263766978228454,0,0.331397375727916,6.05092631806598,4.82155622419182,5.11217063271161,7.80692478064811,3.69363174230364,2.65200898617529,3.13454721478088,2.0036519099174,2.87436292653057,0.627713197974014,0.0764134057479513,0,0.0787107813136792,0,0.383829398097213,0,1.83884244895785,1.50602959389125,1.84877005083394,0,0,0,0,0,0.217010870715852,0.223915474239924,0,0,0.290796477559129,0,0,0.464858073811369,0.411167888021826,0,0.28769239232215,0,0,0.344745680736619,0,0,0.188242339542605,0.545812300115692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,2.68280343881454,0.255725123687061,1.80719576192283,1.50401373190767,0.434539556882471,0.795285947051099,0,2.3633704291017,4.21285855178871,2.19586964232815,1.30979075497713,0.728590576585084,0.370784442784429,0,0.174129737299267,0,0,0,0,0.198762407366705,0,0.694281003215189,0.56530794192401,0.838998872419812,0.275118041940067,0,0,0.71153252537342,1.00416183829401,3.62546385398232,3.04108842287405,0.732186172644509,0.367663080345869,0,0,0.44905874525234,0,0,0.949265659568129,0,0,0,3.05265836499774,2.48485975847659,0.633152558322899,1.32409180813219,2.0078563452417,0.354668382198357,2.24271040056923,2.1349799145941,3.7000132262574,0.933633106199299,1.61652806483626,0.980771418680752,6.35701196108712,5.76175924479999,0.468642863667593,0,0,0,0.23486899728753,0,0.561803226808994,0.204154171254893,0.245668634623536,0.206651562351531,0,0,0.910161361938026,0.718618141816238,0.168336113954066,0.125118519871964,0.277064115484183,1.75591048352335,0,0.150238058906597,0.567160915800105,3.7671823494661,1.06778694409284,0.211931901159562,3.90118424909723,2.26715564324566,3.34932702059318,0.744467425326359,1.5189869901714,1.65642908774038,5.55354303337052,1.56484827691909,2.7479829659198,5.68015348026583,2.11579406278045,0.169560592310488,1.15956511897978,0.545492241181669,0.860413786167011,0.121973706129595,0,0,0.207322110030741,0,0,0,0.643240938192885,0,0.928735856063958,0.721879481669586,0.709840800239063,0.168584690078102,0.482022059766964,0.441175890929576,0.217879444092406,0.237270619111097,0.269662616320329,0.392442930250692,0.38474715694639,0,1.40241773803446,0.8231480226628,0,0,1.96565443335525,0.590789906681404,0,0,2.57351715447788,7.24351883696929,0,0.201057944823262,0.648119116109707,0,2.07986957055916,2.88662684050547,2.55046890945169,7.74897381956423,0.433099343283221,0.462985512576611,0.190254152234598,3.1608175918371,0,0,0,0,0,1.17587489739202,0.567100388969546,1.79117045405697,1.45316969256981,0.766765358330422,0,0.44024217006613,1.24396869324463,2.01767934783746,3.1560608356595,0.253991577168676,1.90994212779139,1.17217447210047,0,0.308482478109971,1.8020583470635,0,1.12131084345361,2.61576041299968,0.51336800074665,4.65378176728,3.57656445851882,0,0.531876233169741,0,0.514414748524284,1.41849132023278,1.0656887160644,0.57191197463259,2.17048642156577,0.823240336780769,0,0,0,0.904318131178758,2.61460037580088,1.09970290300263,0,0,0,0.958499421966331,2.29723871668228,5.70547620162874,0.868687840005475,0.61642896765115,0.895304816199478,0,0,0,0,6.86055485400651,0,0,0.670065061337395,0,0,0,0,0,0,0.542530047399471,2.07970861530807,1.60586089917446,1.10391690523754,0.819989904948992,2.40756879782175,4.5481500811197,0,1.32845119707087,0.184369168541703,0.260650843404249,1.76221041716467,6.51972505240626,0,0.215714200818617,0,0,0,0,2.23297027036899,1.38115775959256,0.280660094433074,1.15325234330131,1.53512174720011,0.482561763430822,2.96836132889982,0.925258162815933,0.355123450626254,0.821271560138091,1.55776328755086,0.813472649219715,0.120859449591622,8.22076528243468,0.0920809889358963,0.114814448164607,0.910455840033585,0.393373244878272,0,0.231046011313244,3.13739907670742,2.92278449306521,0.422206515571503,0,0.170093705276516,1.0795795805107,0,2.70946437543853,3.51182841698397,0.254876273045038,0.831076008928724,0.671624264166535,0,0,2.82095137628028,4.59220503979588,2.27764876265012,0.206082023295445,1.37354197227515,1.73269949833235,1.14853107599234,0.650060246036521,0,4.73686519631398,0.770243085573222,0.307007349452259,3.03240459465967,0.429680979473094,0.725083469571143,0.596586391912706,8.19094727949984,0.165284915360978,0.960950336825531,5.6149593497617,0.2023155617111,0,1.5740617341532,2.0911118104818,1.54016790088044,2.12922412126809,0.869932992075073,4.26245703939016,0.429374660225974,0,0,0,0.255897791311334,0.42793898803392,3.81843897511124,5.49464048139461,0.539617372749944,0.823611089208164,0.117812402345686,2.02182481573316,3.17020642346017,3.79132610615083,1.46290121726877,0.731140468893853,0,1.9109987597118,0.989838023675989,1.13008116620243,1.65409603063837,3.98063385144732,1.75380354101505,0,0,3.44947640836597,0.6196469961995,2.5352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| ||
|short_description=p6@NCOR2 | |||
}} | }} |
Latest revision as of 04:03, 17 September 2015
Short description: | p6@NCOR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_NCOR2_5end |
Coexpression cluster: | NA |
Association with transcript: | 83bp_to_ENST00000420698, uc001ugk.1_5end |
EntrezGene: | NCOR2 |
HGNC: | 7673 |
UniProt: | C9J330 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural plate | 5.23e-14 | 82 |
presumptive neural plate | 5.23e-14 | 82 |
neurectoderm | 1.73e-13 | 86 |
ecto-epithelium | 1.13e-12 | 104 |
structure with developmental contribution from neural crest | 1.97e-11 | 132 |
ectoderm-derived structure | 2.61e-11 | 171 |
ectoderm | 2.61e-11 | 171 |
presumptive ectoderm | 2.61e-11 | 171 |
cell layer | 3.04e-11 | 309 |
epithelium | 5.74e-11 | 306 |
anatomical conduit | 7.18e-10 | 240 |
tube | 8.83e-10 | 192 |
brain | 1.33e-09 | 68 |
future brain | 1.33e-09 | 68 |
pre-chordal neural plate | 2.91e-09 | 61 |
nervous system | 9.78e-09 | 89 |
central nervous system | 1.15e-08 | 81 |
neural tube | 1.39e-08 | 56 |
neural rod | 1.39e-08 | 56 |
future spinal cord | 1.39e-08 | 56 |
neural keel | 1.39e-08 | 56 |
regional part of nervous system | 1.40e-08 | 53 |
regional part of brain | 1.40e-08 | 53 |
segmental subdivision of nervous system | 5.52e-07 | 13 |