FFCP PHASE1:Hg19::chr3:30648066..30648167,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7048 | |EntrezGene=7048 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11773 | |HGNC=11773 | ||
|TSSclassifier=strong | |||
|UniProt=E9PDS4 | |UniProt=E9PDS4 | ||
|association_with_transcript=0bp_to_ENST00000359013,ENST00000383765_5end | |association_with_transcript=0bp_to_ENST00000359013,ENST00000383765_5end | ||
|cluster_id=chr3:30648066..30648167,+ | |||
|coexpression_cluster_id=C4324 | |||
|description=CAGE_peak_1_at_TGFBR2_5end | |description=CAGE_peak_1_at_TGFBR2_5end | ||
|id=chr3:30648066..30648167,+ | |id=chr3:30648066..30648167,+ | ||
|ontology_enrichment_celltype=CL:0000222!4.63e-17!119;CL:0002139!1.05e-15!24;CL:0000115!3.59e-15!35;CL:0000680!1.00e-12!57;CL:0000056!1.00e-12!57;CL:0000355!1.00e-12!57;CL:0000071!1.10e-11!18;CL:0002546!1.10e-11!18;CL:0000187!1.68e-11!54;CL:0002078!4.20e-11!44;CL:0000359!4.94e-11!32;CL:0000183!9.92e-11!59;CL:0000192!1.20e-09!42;CL:0000514!1.20e-09!42;CL:0002371!2.04e-09!591;CL:0000393!1.24e-07!60;CL:0000211!1.24e-07!60;CL:0000213!4.59e-07!57;CL:0000215!4.59e-07!57;CL:0000048!6.96e-07!430 | |ontology_enrichment_celltype=CL:0000222!4.63e-17!119;CL:0002139!1.05e-15!24;CL:0000115!3.59e-15!35;CL:0000680!1.00e-12!57;CL:0000056!1.00e-12!57;CL:0000355!1.00e-12!57;CL:0000071!1.10e-11!18;CL:0002546!1.10e-11!18;CL:0000187!1.68e-11!54;CL:0002078!4.20e-11!44;CL:0000359!4.94e-11!32;CL:0000183!9.92e-11!59;CL:0000192!1.20e-09!42;CL:0000514!1.20e-09!42;CL:0002371!2.04e-09!591;CL:0000393!1.24e-07!60;CL:0000211!1.24e-07!60;CL:0000213!4.59e-07!57;CL:0000215!4.59e-07!57;CL:0000048!6.96e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.06e-15;24!CL:0000115;2.10e-13;36!CL:0000071;1.11e-11;18!CL:0000359;1.16e-10;32!CL:0002078;3.65e-08;45!CL:0000192;1.12e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.06e-17,121;CL:0000115,1.01e-15,36;CL:0002139,1.05e-15,24;CL:0000680,6.33e-13,58;CL:0000056,6.33e-13,58;CL:0000355,6.33e-13,58;CL:0000187,1.06e-11,55;CL:0000071,1.10e-11,18;CL:0002546,1.10e-11,18;CL:0002078,1.46e-11,45;CL:0000359,4.93e-11,32;CL:0000192,7.68e-10,43;CL:0000514,7.68e-10,43;CL:0000393,8.09e-08,61;CL:0000211,8.09e-08,61;CL:0000213,1.99e-07,58;CL:0000215,1.99e-07,58;CL:0000048,2.10e-07,427;CL:0000723,3.69e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002546;1.11e-11;18!CL:0000514;1.12e-07;43!CL:0000355;3.78e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001009!9.25e-34!113;UBERON:0004535!2.55e-32!110;UBERON:0000055!1.45e-27!69;UBERON:0002049!4.64e-27!79;UBERON:0007798!4.64e-27!79;UBERON:0004872!3.53e-25!84;UBERON:0001981!3.47e-24!60;UBERON:0007500!3.47e-24!60;UBERON:0004537!3.47e-24!60;UBERON:0006965!3.47e-24!60;UBERON:0003914!1.59e-19!118;UBERON:0001637!2.82e-18!42;UBERON:0003509!2.82e-18!42;UBERON:0004572!2.82e-18!42;UBERON:0004573!7.27e-16!33;UBERON:0004571!7.27e-16!33;UBERON:0000490!2.36e-15!138;UBERON:0000486!4.15e-13!82;UBERON:0002385!4.67e-13!63;UBERON:0001015!4.67e-13!63;UBERON:0000383!4.67e-13!63;UBERON:0003081!6.96e-13!216;UBERON:0001134!7.84e-13!61;UBERON:0002036!7.84e-13!61;UBERON:0003082!7.84e-13!61;UBERON:0004290!2.03e-12!70;UBERON:0000914!4.23e-12!83;UBERON:0002329!4.23e-12!83;UBERON:0003077!4.23e-12!83;UBERON:0003059!4.23e-12!83;UBERON:0007282!4.23e-12!83;UBERON:0009618!4.23e-12!83;UBERON:0007285!4.23e-12!83;UBERON:0000926!1.06e-11!448;UBERON:0004120!1.06e-11!448;UBERON:0006603!1.06e-11!448;UBERON:0001986!1.10e-11!18;UBERON:0004638!1.10e-11!18;UBERON:0004852!1.10e-11!18;UBERON:0000947!1.70e-10!21;UBERON:0010191!1.70e-10!21;UBERON:0005256!8.26e-10!143;UBERON:0000487!2.23e-09!22;UBERON:0006914!6.69e-09!25;UBERON:0007100!1.38e-08!27;UBERON:0002100!8.35e-08!216;UBERON:0000948!2.36e-07!24;UBERON:0005498!2.36e-07!24;UBERON:0004140!2.36e-07!24;UBERON:0009881!2.36e-07!24;UBERON:0004141!2.36e-07!24;UBERON:0003084!2.36e-07!24;UBERON:0007005!2.36e-07!24;UBERON:0004139!2.36e-07!24;UBERON:0004291!2.36e-07!24;UBERON:0000479!8.30e-07!787 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.02e-14;33!UBERON:0004571;1.02e-14;33!UBERON:0001637;1.09e-13;42!UBERON:0003509;1.09e-13;42!UBERON:0004572;1.09e-13;42!UBERON:0000055;2.68e-13;65!UBERON:0007500;1.75e-12;56!UBERON:0001981;1.75e-12;56!UBERON:0004537;1.75e-12;56!UBERON:0004638;1.11e-11;18!UBERON:0001986;1.11e-11;18!UBERON:0004852;1.11e-11;18!UBERON:0002049;4.89e-11;75!UBERON:0007798;4.89e-11;75!UBERON:0000947;1.67e-10;21!UBERON:0010191;1.67e-10;21!UBERON:0004535;1.84e-09;109!UBERON:0001009;1.92e-09;112!UBERON:0000487;2.26e-09;22!UBERON:0006914;7.32e-09;25!UBERON:0007100;4.16e-08;25!UBERON:0003914;6.14e-08;74!UBERON:0002385;1.10e-07;31!UBERON:0001015;1.10e-07;31!UBERON:0000383;1.10e-07;31!UBERON:0000948;7.13e-07;22 | |||
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| ||
|short_description=p1@TGFBR2 | |short_description=p1@TGFBR2 | ||
}} | }} |
Latest revision as of 22:14, 17 September 2015
Short description: | p1@TGFBR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TGFBR2_5end |
Coexpression cluster: | C4324_Endothelial_Lymphatic_Hepatic_Smooth_Neutrophils_adipose_breast |
Association with transcript: | 0bp_to_ENST00000359013, ENST00000383765_5end |
EntrezGene: | TGFBR2 |
HGNC: | 11773 |
UniProt: | E9PDS4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.06e-17 | 121 |
endothelial cell | 1.01e-15 | 36 |
endothelial cell of vascular tree | 1.05e-15 | 24 |
muscle precursor cell | 6.33e-13 | 58 |
myoblast | 6.33e-13 | 58 |
multi-potent skeletal muscle stem cell | 6.33e-13 | 58 |
muscle cell | 1.06e-11 | 55 |
blood vessel endothelial cell | 1.10e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.10e-11 | 18 |
meso-epithelial cell | 1.46e-11 | 45 |
vascular associated smooth muscle cell | 4.93e-11 | 32 |
smooth muscle cell | 7.68e-10 | 43 |
smooth muscle myoblast | 7.68e-10 | 43 |
electrically responsive cell | 8.09e-08 | 61 |
electrically active cell | 8.09e-08 | 61 |
lining cell | 1.99e-07 | 58 |
barrier cell | 1.99e-07 | 58 |
multi fate stem cell | 2.10e-07 | 427 |
somatic stem cell | 3.69e-07 | 433 |