FFCP PHASE1:Hg19::chr12:6665200..6665255,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:6665200..6665255,-
|short_description=p1@IFFO1
|description=CAGE_peak_1_at_IFFO1_5end
|association_with_transcript=0bp_to_ENST00000336604,ENST00000356896,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25900 | |EntrezGene=25900 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24970 | |HGNC=24970 | ||
|TSSclassifier=strong | |||
|UniProt=Q0D2I5,Q6P593,B4DQQ1,Q9Y4M3 | |UniProt=Q0D2I5,Q6P593,B4DQQ1,Q9Y4M3 | ||
|association_with_transcript=0bp_to_ENST00000336604,ENST00000356896,ENST00000396840,ENST00000487279,ENST00000488007,NM_001039670,NM_001193457,NM_080730,NR_036467,uc001qpc.1,uc001qpd.1,uc001qpe.1,uc001qpf.1,uc010sfe.1_5end | |||
|cluster_id=chr12:6665200..6665255,- | |||
|description=CAGE_peak_1_at_IFFO1_5end | |||
|id=chr12:6665200..6665255,- | |||
|ontology_enrichment_celltype=CL:0002087!3.52e-10!119;CL:0000738!3.85e-10!140;CL:0002031!9.52e-09!124 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,1.21e-11,115;CL:0000738,2.14e-11,136;CL:0002031,5.75e-10,120;CL:0000766,5.37e-08,72;CL:0002194,1.13e-07,59;CL:0000576,1.13e-07,59;CL:0000040,1.13e-07,59;CL:0000559,1.13e-07,59;CL:0000557,1.28e-07,67;CL:0000988,2.13e-07,177;CL:0000839,2.68e-07,66;CL:0000219,6.26e-07,386;CL:0002009,7.05e-07,61;CL:0000037,7.13e-07,168;CL:0000473,7.32e-07,48;CL:0000234,7.32e-07,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.82e-20!115;UBERON:0001049!2.37e-17!57;UBERON:0005068!2.37e-17!57;UBERON:0006241!2.37e-17!57;UBERON:0007135!2.37e-17!57;UBERON:0002616!1.27e-14!59;UBERON:0000955!5.50e-14!69;UBERON:0006238!5.50e-14!69;UBERON:0000073!9.32e-14!94;UBERON:0001016!9.32e-14!94;UBERON:0001017!3.57e-13!82;UBERON:0005743!5.45e-13!86;UBERON:0003080!1.99e-12!42;UBERON:0002780!3.80e-12!41;UBERON:0001890!3.80e-12!41;UBERON:0006240!3.80e-12!41;UBERON:0002193!5.00e-12!112;UBERON:0002390!1.40e-11!102;UBERON:0003061!1.40e-11!102;UBERON:0002346!2.16e-11!90;UBERON:0003075!3.53e-11!86;UBERON:0007284!3.53e-11!86;UBERON:0002020!1.03e-10!34;UBERON:0003528!1.03e-10!34;UBERON:0001893!1.57e-10!34;UBERON:0002791!2.64e-10!33;UBERON:0001869!4.72e-10!32;UBERON:0002619!8.36e-09!22;UBERON:0000956!2.26e-08!25;UBERON:0000203!2.26e-08!25;UBERON:0001950!3.63e-08!20;UBERON:0003056!4.78e-08!61;UBERON:0000153!2.88e-07!129;UBERON:0007811!2.88e-07!129;UBERON:0002405!5.76e-07!115;UBERON:0002371!7.66e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;3.63e-09;34!UBERON:0002020;3.63e-09;34!UBERON:0001893;3.75e-09;34!UBERON:0001869;4.65e-09;32!UBERON:0002791;5.53e-09;32!UBERON:0000073;6.18e-09;53!UBERON:0002616;6.18e-09;53!UBERON:0002780;6.56e-09;41!UBERON:0001890;6.56e-09;41!UBERON:0002619;7.47e-09;22!UBERON:0000956;2.10e-08;25!UBERON:0000203;2.10e-08;25!UBERON:0001950;3.29e-08;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.90e-20,114;UBERON:0001049,4.46e-17,56;UBERON:0005068,4.46e-17,56;UBERON:0006241,4.46e-17,56;UBERON:0007135,4.46e-17,56;UBERON:0000073,1.33e-15,53;UBERON:0002616,1.33e-15,53;UBERON:0000955,1.02e-13,68;UBERON:0006238,1.02e-13,68;UBERON:0001016,1.15e-13,89;UBERON:0002193,1.24e-13,108;UBERON:0002390,3.06e-13,98;UBERON:0003061,3.06e-13,98;UBERON:0001017,6.46e-13,81;UBERON:0002346,1.40e-12,86;UBERON:0003075,2.18e-12,82;UBERON:0007284,2.18e-12,82;UBERON:0002780,3.71e-12,41;UBERON:0001890,3.71e-12,41;UBERON:0003080,3.71e-12,41;UBERON:0006240,3.71e-12,41;UBERON:0003528,1.00e-10,34;UBERON:0002020,1.00e-10,34;UBERON:0001893,1.53e-10,34;UBERON:0001869,4.62e-10,32;UBERON:0002791,4.74e-10,32;UBERON:0002405,1.77e-09,93;UBERON:0002619,8.21e-09,22;UBERON:0000956,2.22e-08,25;UBERON:0000203,2.22e-08,25;UBERON:0002371,3.49e-08,76;UBERON:0001950,3.57e-08,20;UBERON:0003056,4.76e-08,61;UBERON:0001474,1.91e-07,82;UBERON:0010314,3.17e-07,132;UBERON:0003081,7.17e-07,203 | |||
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| ||
|short_description=p1@IFFO1 | |||
}} | }} |
Latest revision as of 00:33, 20 September 2015
Short description: | p1@IFFO1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IFFO1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000336604, ENST00000356896, ENST00000396840, ENST00000487279, ENST00000488007, NM_001039670, NM_001193457, NM_080730, NR_036467, uc001qpc.1, uc001qpd.1, uc001qpe.1, uc001qpf.1, uc010sfe.1_5end |
EntrezGene: | IFFO1 |
HGNC: | 24970 |
UniProt: | Q0D2I5Q6P593B4DQQ1Q9Y4M3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 1.21e-11 | 115 |
leukocyte | 2.14e-11 | 136 |
hematopoietic lineage restricted progenitor cell | 5.75e-10 | 120 |
myeloid leukocyte | 5.37e-08 | 72 |
monopoietic cell | 1.13e-07 | 59 |
monocyte | 1.13e-07 | 59 |
monoblast | 1.13e-07 | 59 |
promonocyte | 1.13e-07 | 59 |
granulocyte monocyte progenitor cell | 1.28e-07 | 67 |
hematopoietic cell | 2.13e-07 | 177 |
myeloid lineage restricted progenitor cell | 2.68e-07 | 66 |
motile cell | 6.26e-07 | 386 |
macrophage dendritic cell progenitor | 7.05e-07 | 61 |
hematopoietic stem cell | 7.13e-07 | 168 |
defensive cell | 7.32e-07 | 48 |
phagocyte | 7.32e-07 | 48 |