FFCP PHASE1:Hg19::chr1:44457848..44457883,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=149473 | |EntrezGene=149473 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28688 | |HGNC=28688 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-10bp_to_ENST00000479055_5end | |association_with_transcript=-10bp_to_ENST00000479055_5end | ||
|cluster_id=chr1:44457848..44457883,+ | |||
|description=CAGE_peak_3_at_CCDC24_5end | |description=CAGE_peak_3_at_CCDC24_5end | ||
|id=chr1:44457848..44457883,+ | |id=chr1:44457848..44457883,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.80e-20!254;CL:0002076!2.29e-08!43;CL:0000223!1.31e-07!59;CL:0002159!3.85e-07!13;CL:1000497!5.23e-07!18;CL:0002518!5.23e-07!18 | |ontology_enrichment_celltype=CL:0000066!2.80e-20!254;CL:0002076!2.29e-08!43;CL:0000223!1.31e-07!59;CL:0002159!3.85e-07!13;CL:1000497!5.23e-07!18;CL:0002518!5.23e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:1000507;1.02e-14;10!CL:1000494;1.02e-14;10!CL:1000497;2.50e-11;17!CL:0002518;2.50e-11;17!CL:1000449;3.09e-11;15!CL:0002322;3.21e-09;5!CL:0002681;6.70e-08;12!CL:0002584;6.70e-08;12!CL:0002159;2.53e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,3.86e-15,10;CL:1000494,3.86e-15,10;CL:0000066,5.10e-14,253;CL:1000497,1.27e-11,17;CL:0002518,1.27e-11,17;CL:1000449,1.56e-11,15;CL:0002322,2.83e-09,5;CL:0002681,4.14e-08,12;CL:0002584,4.14e-08,12;CL:0002159,2.64e-07,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.93e-17!106;DOID:0050687!3.45e-13!143 | |ontology_enrichment_disease=DOID:305!1.93e-17!106;DOID:0050687!3.45e-13!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.77e-10,106;DOID:0050687,3.37e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0005743!2.23e-18!86;UBERON:0001017!3.67e-17!82;UBERON:0001049!1.12e-16!57;UBERON:0005068!1.12e-16!57;UBERON:0006241!1.12e-16!57;UBERON:0007135!1.12e-16!57;UBERON:0000153!4.98e-16!129;UBERON:0007811!4.98e-16!129;UBERON:0000955!9.78e-16!69;UBERON:0006238!9.78e-16!69;UBERON:0000073!1.22e-15!94;UBERON:0001016!1.22e-15!94;UBERON:0000033!1.39e-15!123;UBERON:0003075!1.99e-15!86;UBERON:0007284!1.99e-15!86;UBERON:0002616!1.20e-14!59;UBERON:0000481!1.92e-14!347;UBERON:0002346!2.41e-14!90;UBERON:0004121!9.18e-14!169;UBERON:0003056!1.03e-13!61;UBERON:0002780!1.38e-13!41;UBERON:0001890!1.38e-13!41;UBERON:0006240!1.38e-13!41;UBERON:0000924!3.69e-13!173;UBERON:0006601!3.69e-13!173;UBERON:0003080!5.80e-13!42;UBERON:0000062!6.82e-13!511;UBERON:0000064!1.11e-12!219;UBERON:0000475!1.16e-12!365;UBERON:0001869!1.82e-11!32;UBERON:0002020!4.09e-11!34;UBERON:0003528!4.09e-11!34;UBERON:0001893!6.80e-11!34;UBERON:0007023!6.92e-11!115;UBERON:0002791!1.86e-10!33;UBERON:0005177!2.48e-10!107;UBERON:0000956!4.02e-10!25;UBERON:0000203!4.02e-10!25;UBERON:0002619!9.49e-10!22;UBERON:0000464!1.10e-09!104;UBERON:0002113!2.59e-09!27;UBERON:0003918!2.59e-09!27;UBERON:0005095!2.59e-09!27;UBERON:0007687!2.59e-09!27;UBERON:0000483!6.65e-09!309;UBERON:0001950!6.75e-09!20;UBERON:0000489!8.02e-09!32;UBERON:0000119!1.74e-08!312;UBERON:0000466!1.96e-08!126;UBERON:0000922!3.59e-08!612;UBERON:0001008!5.55e-08!45;UBERON:0000058!9.39e-08!26;UBERON:0006554!1.16e-07!44;UBERON:0004111!3.21e-07!241;UBERON:0000080!3.35e-07!18;UBERON:0002120!3.35e-07!18;UBERON:0004875!3.35e-07!18;UBERON:0005721!3.35e-07!18;UBERON:0005754!3.35e-07!18;UBERON:0007297!3.35e-07!18;UBERON:0004119!3.86e-07!169;UBERON:0000925!3.86e-07!169;UBERON:0006595!3.86e-07!169;UBERON:0004876!4.24e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.02e-14;10!UBERON:0009773;1.02e-14;10!UBERON:0001231;1.02e-14;10!UBERON:0004810;1.02e-14;10!UBERON:0002113;1.13e-11;24!UBERON:0011143;1.13e-11;24!UBERON:0006555;3.09e-11;15!UBERON:0004819;3.09e-11;15!UBERON:0001285;3.09e-11;15!UBERON:0007684;3.09e-11;15!UBERON:0006554;9.41e-10;30!UBERON:0001008;9.41e-10;30!UBERON:0000489;5.92e-09;29!UBERON:0003135;6.70e-08;11!UBERON:0001225;6.70e-08;12!UBERON:0008987;6.70e-08;12!UBERON:0003296;8.38e-08;4!UBERON:0010133;8.38e-08;4!UBERON:0001851;1.23e-07;15!UBERON:0002780;1.91e-07;41!UBERON:0001890;1.91e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,3.86e-15,10;UBERON:0002113,7.96e-14,26;UBERON:0003918,7.96e-14,26;UBERON:0011143,7.96e-14,26;UBERON:0005095,7.96e-14,26;UBERON:0007687,7.96e-14,26;UBERON:0006555,2.21e-12,16;UBERON:0004819,2.21e-12,16;UBERON:0004211,1.56e-11,15;UBERON:0009773,1.56e-11,15;UBERON:0001231,1.56e-11,15;UBERON:0001285,1.56e-11,15;UBERON:0007684,1.56e-11,15;UBERON:0004208,1.56e-11,15;UBERON:0000489,8.23e-11,31;UBERON:0005177,3.74e-09,101;UBERON:0006554,5.08e-09,47;UBERON:0002780,5.14e-09,41;UBERON:0001890,5.14e-09,41;UBERON:0003080,5.14e-09,41;UBERON:0006240,5.14e-09,41;UBERON:0001008,1.02e-08,48;UBERON:0000073,2.51e-08,53;UBERON:0002616,2.51e-08,53;UBERON:0001225,4.14e-08,12;UBERON:0008987,4.14e-08,12;UBERON:0003135,7.97e-08,11;UBERON:0001851,8.16e-08,15;UBERON:0003296,8.20e-08,4;UBERON:0010133,8.20e-08,4;UBERON:0001049,1.36e-07,56;UBERON:0005068,1.36e-07,56;UBERON:0006241,1.36e-07,56;UBERON:0007135,1.36e-07,56;UBERON:0003056,1.57e-07,61;UBERON:0005172,2.13e-07,54;UBERON:0005173,2.13e-07,54;UBERON:0001869,3.78e-07,32;UBERON:0010371,4.49e-07,104;UBERON:0000922,5.91e-07,592;UBERON:0009569,7.25e-07,112 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,5.40614660303319,13.9560233594486,0.218441372130172,0.263766978228454,0.618831764800233,0.331397375727916,0,0,0,0,0.123121058076788,0.204000691244253,0.313454721478088,0.286235987131057,0.273748850145768,0.125542639594803,0.0764134057479513,0.0821005894499457,0,0,0,0.154816123316076,0,0,0.739508020333575,0,0.426507697462265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0.283604451492204,0,0.175669571386252,1.44076983047484,2.5500670180478,1.85392221392215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18047026071267,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0.169560592310488,0.966304265816484,1.36373060295417,2.86804595389004,5.12289565744301,3.18071443971565,4.88014560051977,3.93912009058408,4.79409616663694,4.01475094983413,0,0,0,0,0,0.473227200159376,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,1.22988438543114,0.343135620597051,1.86575485194663,1.1240175325762,0.201057944823262,1.38882667737794,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0.790204397959275,0,0,0,0,5.62403003920662,1.17587489739202,3.68615252830205,0.0895585227028483,0,0.383382679165211,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61460037580088,0.799783929456456,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0.271265023699736,0,0,0.157702415033935,0,0,0,0,0,0.184369168541703,0.0868836144680828,0.195801157462741,0,0,0,0.106727557803444,0.606255142892519,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.966875596732978,1.20303882181971,0.184161977871793,0,0,0,3.60959690325929,3.08061348417659,5.49044838423799,1.46139224653261,1.47772280450026,0,0,0.215915916102139,0,4.6060894382455,6.02027728625824,1.78413391131527,1.66215201785745,2.68649705666614,0,0,0.256450125116389,0.328014645699706,0.325378394664303,0.309123034943167,0,0,1.14853107599234,0.650060246036521,1.6068392984416,0.096670718292122,0,0,0,0,0,0,0,0.330569830721956,0.768760269460425,1.53135254993501,0.6069466851333,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0.255897791311334,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699869440489966,0.384888450902048,1.34060455107157,2.17781969722645,0.282431402330337,1.29151611801369,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,1.96032172784825,0.185803175125719,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30998378285754,0,0,0,0,0.47748896947538,0,0,0.994147647766298,1.26602474769461,0,0.494411622680279,2.11125408127993,0,0,7.05411693991973,0.409074730008619,0.123084805461069,0,0.718946809178615,0,0,0,0,0,0.969332746095218,0.927680981618513,0,0.7812832832557,4.98521999978316,0,0.568967241427498,0.762760950878299,1.18193840883968,1.72371686620732,0,0.173624994933292,0.885741385813839,2.53252521113357,1.52581736317083,0.331737779793674,1.47773809476774,1.31631238292384,0.21787692703798,0,0.153900517007594,0,0.46112780877612,1.52587995496613,1.84700532267414,0.31900115973192,0.366390373607449,0,0,0,0,0,0,0,0.189753732724185,0,5.4859496777287,0.816164040795739,1.41353071433941,0.649165919226273,0,0.176915129006678,0.611030144933625,0,0,0,0.134802265961354,0,0.234264445725339,0,1.9566461893209,0.242780379534093,3.15667522279512,1.20990716048664,1.22429104652196,0.126373159256976,2.1045278718029,0.829505531177977,0,0,0,0,5.69219092059585,0,2.60339607502696,1.27390116638691,0.174118413160805,1.04836000945218,0.343972064943233,0,0,0,0,0.353024506766001,3.61569185248852,0,0,1.7727022867646,2.73771935828724,0.320635281006135,0.85381197895741,0.19980960958213,0.288180834308212,0.458146384663663,0.171594997861965,0,2.36079817574322,0.235694034616795,0.407712618220842,0.523014231561666,0.203996435272644,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0.0671834724867263,0,1.16495949527454,0.315132729228895,0.494495150286999,0.539228350833479,0,0,0.795229689809303,1.0896272488926,4.50108815702054,4.67634084430595,4.15440338029185,0,0.77380195455795,2.55148137963704,0,1.18208560948797,4.56354916774483,0.739202355635845,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0.517131825446202,0.92562821219883,1.19760786519031,11.2770403570668,0.427149650270779,1.41483874589699,0.828478110694391,0,0,0,0,0,0,0,0,1.25643277000187,1.77213635993397,0.854183854313742,0.3755727921195,1.14681839138014,0.221858103073705,0.558867626472451,0,0.249960815924213,0,0,0.235265819698172,0.936669811613763,2.3187364577732,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0.155262956876259,0,0,0,0.450772826991655,0,0,0,0.107410557042488,0,0,0,0,0,0,0,3.43106546199881,0.521988583930423,0,0,0,0,0.617602894321944,1.53498834705095,0,1.3503982678964,0.168942440653073,0.256241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| ||
|short_description=p3@CCDC24 | |short_description=p3@CCDC24 | ||
}} | }} |
Latest revision as of 05:43, 18 September 2015
Short description: | p3@CCDC24 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CCDC24_5end |
Coexpression cluster: | NA |
Association with transcript: | -10bp_to_ENST00000479055_5end |
EntrezGene: | CCDC24 |
HGNC: | 28688 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 3.86e-15 | 10 |
nephron tubule epithelial cell | 3.86e-15 | 10 |
epithelial cell | 5.10e-14 | 253 |
kidney cell | 1.27e-11 | 17 |
kidney epithelial cell | 1.27e-11 | 17 |
epithelial cell of nephron | 1.56e-11 | 15 |
embryonic stem cell | 2.83e-09 | 5 |
kidney cortical cell | 4.14e-08 | 12 |
renal cortical epithelial cell | 4.14e-08 | 12 |
general ecto-epithelial cell | 2.64e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.77e-10 | 106 |
cell type cancer | 3.37e-07 | 143 |