FFCP PHASE1:Hg19::chr12:94853739..94853764,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:94853739..94853764,-
|short_description=p3@CCDC41
|description=CAGE_peak_3_at_CCDC41_5end
|association_with_transcript=0bp_to_ENST00000397807,ENST00000546...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51134 | |EntrezGene=51134 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17966 | |HGNC=17966 | ||
|TSSclassifier=strong | |||
|UniProt=Q3B787,Q9Y592 | |UniProt=Q3B787,Q9Y592 | ||
|association_with_transcript=0bp_to_ENST00000397807,ENST00000546527,NM_001042399,NM_016122,uc001tdd.2,uc001tde.2,uc001tdf.2,uc009zsw.1_5end | |||
|cluster_id=chr12:94853739..94853764,- | |||
|description=CAGE_peak_3_at_CCDC41_5end | |||
|id=chr12:94853739..94853764,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.03e-14!235;DOID:14566!1.80e-13!239;DOID:0050687!1.54e-10!143;DOID:0050686!5.66e-08!137;DOID:2531!1.72e-07!51;DOID:0060083!1.72e-07!51;DOID:305!2.31e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.21e-09,235;DOID:14566,8.20e-09,239;DOID:3095,6.22e-07,22;DOID:2994,6.22e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!3.63e-17!94;UBERON:0001016!3.63e-17!94;UBERON:0001017!5.05e-16!82;UBERON:0005743!1.02e-15!86;UBERON:0001049!1.87e-15!57;UBERON:0005068!1.87e-15!57;UBERON:0006241!1.87e-15!57;UBERON:0007135!1.87e-15!57;UBERON:0002346!1.28e-13!90;UBERON:0002780!2.16e-13!41;UBERON:0001890!2.16e-13!41;UBERON:0006240!2.16e-13!41;UBERON:0002616!2.32e-13!59;UBERON:0003080!4.66e-13!42;UBERON:0003075!5.83e-13!86;UBERON:0007284!5.83e-13!86;UBERON:0000955!1.23e-12!69;UBERON:0006238!1.23e-12!69;UBERON:0007023!2.77e-12!115;UBERON:0001893!3.40e-12!34;UBERON:0002020!6.23e-12!34;UBERON:0003528!6.23e-12!34;UBERON:0002791!7.96e-12!33;UBERON:0001869!9.26e-12!32;UBERON:0000924!3.33e-10!173;UBERON:0006601!3.33e-10!173;UBERON:0003056!4.22e-10!61;UBERON:0004121!1.25e-09!169;UBERON:0000956!1.08e-08!25;UBERON:0000203!1.08e-08!25;UBERON:0002619!3.18e-08!22;UBERON:0000153!1.83e-07!129;UBERON:0007811!1.83e-07!129;UBERON:0001950!3.55e-07!20;UBERON:0000033!7.46e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;8.94e-12;32!UBERON:0001869;1.07e-11;32!UBERON:0001893;3.21e-11;34!UBERON:0003528;3.23e-11;34!UBERON:0002020;3.23e-11;34!UBERON:0002780;3.28e-11;41!UBERON:0001890;3.28e-11;41!UBERON:0000073;1.52e-09;53!UBERON:0002616;1.52e-09;53!UBERON:0000956;3.13e-09;25!UBERON:0000203;3.13e-09;25!UBERON:0002619;1.51e-08;22!UBERON:0001950;2.45e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.25e-19,89;UBERON:0001049,1.34e-17,56;UBERON:0005068,1.34e-17,56;UBERON:0006241,1.34e-17,56;UBERON:0007135,1.34e-17,56;UBERON:0001017,1.37e-17,81;UBERON:0000073,3.09e-17,53;UBERON:0002616,3.09e-17,53;UBERON:0002346,1.15e-15,86;UBERON:0002780,2.42e-15,41;UBERON:0001890,2.42e-15,41;UBERON:0003080,2.42e-15,41;UBERON:0006240,2.42e-15,41;UBERON:0003075,5.67e-15,82;UBERON:0007284,5.67e-15,82;UBERON:0000955,1.86e-14,68;UBERON:0006238,1.86e-14,68;UBERON:0001893,7.03e-14,34;UBERON:0003056,8.39e-14,61;UBERON:0003528,1.44e-13,34;UBERON:0002020,1.44e-13,34;UBERON:0001869,2.38e-13,32;UBERON:0002791,6.04e-13,32;UBERON:0007023,5.25e-12,114;UBERON:0004121,2.26e-10,171;UBERON:0000924,2.26e-10,171;UBERON:0006601,2.26e-10,171;UBERON:0010371,7.22e-10,104;UBERON:0000956,1.11e-09,25;UBERON:0000203,1.11e-09,25;UBERON:0002619,4.22e-09,22;UBERON:0010314,8.42e-09,132;UBERON:0001950,7.39e-08,20;UBERON:0011216,1.43e-07,223 | |||
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| ||
|short_description=p3@CCDC41 | |||
}} | }} |
Latest revision as of 01:28, 16 September 2015
Short description: | p3@CCDC41 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CCDC41_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000397807, ENST00000546527, NM_001042399, NM_016122, uc001tdd.2, uc001tde.2, uc001tdf.2, uc009zsw.1_5end |
EntrezGene: | CCDC41 |
HGNC: | 17966 |
UniProt: | Q3B787Q9Y592 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cancer | 3.21e-09 | 235 |
disease of cellular proliferation | 8.20e-09 | 239 |
germ cell and embryonal cancer | 6.22e-07 | 22 |
germ cell cancer | 6.22e-07 | 22 |