FFCP PHASE1:Hg19::chr6:24146395..24146398,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:24146395..24146398,+ | |||
|coexpression_cluster_id=C2110 | |||
|description=CAGE_peak_at_chr6:24146395..24146398,+ | |description=CAGE_peak_at_chr6:24146395..24146398,+ | ||
|id=chr6:24146395..24146398,+ | |id=chr6:24146395..24146398,+ | ||
|ontology_enrichment_celltype=CL:0000242!4.84e-10!2 | |ontology_enrichment_celltype=CL:0000242!4.84e-10!2 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.81e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!3.63e-85!41;UBERON:0001890!3.63e-85!41;UBERON:0006240!3.63e-85!41;UBERON:0003080!4.97e-83!42;UBERON:0001893!2.71e-82!34;UBERON:0002020!7.27e-82!34;UBERON:0003528!7.27e-82!34;UBERON:0001869!5.12e-81!32;UBERON:0001049!3.09e-78!57;UBERON:0005068!3.09e-78!57;UBERON:0006241!3.09e-78!57;UBERON:0007135!3.09e-78!57;UBERON:0002791!4.44e-78!33;UBERON:0002619!1.16e-75!22;UBERON:0002616!2.19e-75!59;UBERON:0000955!3.29e-71!69;UBERON:0006238!3.29e-71!69;UBERON:0001950!4.77e-67!20;UBERON:0000956!2.26e-66!25;UBERON:0000203!2.26e-66!25;UBERON:0003056!1.02e-63!61;UBERON:0005743!4.61e-63!86;UBERON:0001017!1.12e-62!82;UBERON:0000073!9.43e-60!94;UBERON:0001016!9.43e-60!94;UBERON:0003075!2.50e-56!86;UBERON:0007284!2.50e-56!86;UBERON:0002346!1.61e-53!90;UBERON:0000033!1.11e-44!123;UBERON:0000153!2.86e-42!129;UBERON:0007811!2.86e-42!129;UBERON:0007023!5.18e-41!115;UBERON:0004121!3.40e-36!169;UBERON:0000924!3.47e-35!173;UBERON:0006601!3.47e-35!173;UBERON:0001871!4.64e-28!7;UBERON:0000200!1.05e-27!6;UBERON:0000349!5.88e-23!5;UBERON:0000025!4.29e-18!194;UBERON:0002420!1.60e-17!9;UBERON:0007245!1.60e-17!9;UBERON:0010009!1.60e-17!9;UBERON:0010011!1.60e-17!9;UBERON:0000454!1.60e-17!9;UBERON:0002308!7.24e-17!9;UBERON:0000125!7.24e-17!9;UBERON:0002021!5.23e-15!5;UBERON:0002771!8.26e-15!3;UBERON:0001872!1.38e-14!5;UBERON:0000988!8.73e-14!3;UBERON:0004111!3.74e-13!241;UBERON:0000064!8.90e-13!219;UBERON:0000483!3.62e-12!309;UBERON:0000119!5.64e-12!312;UBERON:0000475!1.16e-11!365;UBERON:0000477!7.22e-11!286;UBERON:0001870!1.27e-10!2;UBERON:0000369!1.55e-10!4;UBERON:0002435!1.55e-10!4;UBERON:0000204!1.55e-10!4;UBERON:0010082!1.55e-10!4;UBERON:0001876!1.60e-10!2;UBERON:0001954!2.43e-10!2;UBERON:0003022!2.43e-10!2;UBERON:0002421!2.43e-10!2;UBERON:0002600!2.43e-10!2;UBERON:0009663!3.09e-10!7;UBERON:0002148!1.70e-09!2;UBERON:0009662!1.70e-09!2;UBERON:0002298!7.25e-09!8;UBERON:0000481!1.32e-07!347;UBERON:0000062!3.38e-07!511;UBERON:0005383!5.99e-07!3;UBERON:0005382!5.99e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;3.06e-38;20!UBERON:0002619;5.16e-35;22!UBERON:0000956;4.21e-31;25!UBERON:0000203;4.21e-31;25!UBERON:0001871;2.74e-29;6!UBERON:0002771;4.90e-26;2!UBERON:0001876;4.90e-26;2!UBERON:0001893;5.83e-26;34!UBERON:0001869;3.75e-25;32!UBERON:0003528;6.96e-23;34!UBERON:0002791;6.96e-23;32!UBERON:0002020;6.96e-23;34!UBERON:0002780;1.11e-11;41!UBERON:0001890;1.11e-11;41!UBERON:0000349;2.80e-11;5!UBERON:0001872;3.42e-11;5!UBERON:0002021;3.42e-11;5!UBERON:0000200;1.27e-09;6!UBERON:0000073;1.41e-09;53!UBERON:0002616;1.41e-09;53!UBERON:0000955;4.30e-09;68!UBERON:0001017;1.17e-07;75!UBERON:0002420;7.69e-07;9!UBERON:0007245;7.69e-07;9!UBERON:0010009;7.69e-07;9!UBERON:0010011;7.69e-07;9!UBERON:0000454;7.69e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,3.06e-38,20;UBERON:0002619,5.16e-35,22;UBERON:0000956,4.21e-31,25;UBERON:0000203,4.21e-31,25;UBERON:0001871,2.74e-29,6;UBERON:0001876,4.32e-26,2;UBERON:0002771,5.56e-26,2;UBERON:0002791,9.87e-25,32;UBERON:0001869,9.87e-25,32;UBERON:0003528,2.23e-23,34;UBERON:0002020,2.23e-23,34;UBERON:0001893,2.23e-23,34;UBERON:0002780,1.19e-19,41;UBERON:0001890,1.19e-19,41;UBERON:0003080,1.19e-19,41;UBERON:0006240,1.19e-19,41;UBERON:0000073,1.70e-15,53;UBERON:0002616,1.70e-15,53;UBERON:0001049,9.92e-15,56;UBERON:0005068,9.92e-15,56;UBERON:0006241,9.92e-15,56;UBERON:0007135,9.92e-15,56;UBERON:0003056,1.29e-13,61;UBERON:0000955,3.68e-12,68;UBERON:0006238,3.68e-12,68;UBERON:0000349,2.66e-11,5;UBERON:0002021,3.26e-11,5;UBERON:0001872,3.60e-11,5;UBERON:0001017,2.17e-10,81;UBERON:0003075,2.17e-10,82;UBERON:0007284,2.17e-10,82;UBERON:0002346,5.98e-10,86;UBERON:0000200,1.32e-09,6;UBERON:0001016,1.88e-09,89;UBERON:0010371,2.22e-08,104;UBERON:0007023,8.86e-08,114;UBERON:0002420,7.48e-07,9;UBERON:0007245,7.48e-07,9;UBERON:0010009,7.48e-07,9;UBERON:0010011,7.48e-07,9;UBERON:0000454,7.48e-07,9;UBERON:0010314,8.99e-07,132 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97659059106519,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.468528891450678,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.569797163602908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,3.29470915235301,0.250381861413,0,0,0.124192805882767,0,0,0,0,0,0.468334905806882,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.128458450192919,2.8339315265117,0,0.205116364240755,0.252071696221718,0.345786262321089,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607838261565552,2.34323429584154,0.206686796501184,0.126831620387814,0,0,0,0,0,0,0,0,0.455324382702595,0,0,0,0.40781839786099,0.197318320688547,0,0,0,0.942693539496011,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611923411718232,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97659059106519,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.468528891450678,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.569797163602908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,3.29470915235301,0.250381861413,0,0,0.124192805882767,0,0,0,0,0,0.468334905806882,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.128458450192919,2.8339315265117,0,0.205116364240755,0.252071696221718,0.345786262321089,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607838261565552,2.34323429584154,0.206686796501184,0.126831620387814,0,0,0,0,0,0,0,0,0.455324382702595,0,0,0,0.40781839786099,0.197318320688547,0,0,0,0.942693539496011,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611923411718232,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:24146395..24146398,+ | |short_description=p@chr6:24146395..24146398,+ | ||
}} | }} |
Latest revision as of 22:43, 30 July 2015
Short description: | p@chr6:24146395..24146398, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:24146395..24146398, + |
Coexpression cluster: | C2110_amygdala_occipital_medial_parietal_putamen_temporal_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data