FFCP PHASE1:Hg19::chr20:62795787..62795793,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4661 | |EntrezGene=4661 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7622 | |HGNC=7622 | ||
|TSSclassifier=strong | |||
|UniProt=Q01538,F5H7M8,Q7Z5W2 | |UniProt=Q01538,F5H7M8,Q7Z5W2 | ||
|association_with_transcript=-33bp_to_ENST00000328439,ENST00000536311,NM_004535,uc002yii.2_5end | |association_with_transcript=-33bp_to_ENST00000328439,ENST00000536311,NM_004535,uc002yii.2_5end | ||
|cluster_id=chr20:62795787..62795793,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_8_at_MYT1_5end | |description=CAGE_peak_8_at_MYT1_5end | ||
|id=chr20:62795787..62795793,+ | |id=chr20:62795787..62795793,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;5.15e-21;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.20e-118;3 | |||
|ontology_enrichment_disease=DOID:169!9.05e-09!6 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002680;2.82e-70;9!UBERON:0001895;2.82e-70;9!UBERON:0002037;1.22e-59;6!UBERON:0004733;5.63e-53;12!UBERON:0002028;5.63e-53;12!UBERON:0004732;5.57e-49;13!UBERON:0000988;1.71e-14;3!UBERON:0001016;4.20e-09;83!UBERON:0000073;5.95e-09;53!UBERON:0002616;5.95e-09;53!UBERON:0002298;6.55e-08;6 | |||
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|short_description=p8@MYT1 | |short_description=p8@MYT1 | ||
}} | }} |
Latest revision as of 15:34, 17 September 2015
Short description: | p8@MYT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_MYT1_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -33bp_to_ENST00000328439, ENST00000536311, NM_004535, uc002yii.2_5end |
EntrezGene: | MYT1 |
HGNC: | 7622 |
UniProt: | Q01538F5H7M8Q7Z5W2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of metencephalon | 3.09e-70 | 9 |
metencephalon | 3.09e-70 | 9 |
future metencephalon | 3.09e-70 | 9 |
cerebellum | 9.96e-60 | 6 |
rhombic lip | 9.96e-60 | 6 |
segmental subdivision of hindbrain | 6.02e-53 | 12 |
hindbrain | 6.02e-53 | 12 |
presumptive hindbrain | 6.02e-53 | 12 |
segmental subdivision of nervous system | 5.93e-49 | 13 |
posterior neural tube | 1.46e-42 | 15 |
chordal neural plate | 1.46e-42 | 15 |
pons | 2.09e-14 | 3 |
central nervous system | 1.45e-12 | 81 |
regional part of nervous system | 2.04e-12 | 53 |
regional part of brain | 2.04e-12 | 53 |
neural tube | 8.46e-12 | 56 |
neural rod | 8.46e-12 | 56 |
future spinal cord | 8.46e-12 | 56 |
neural keel | 8.46e-12 | 56 |
nervous system | 2.13e-11 | 89 |
brain | 9.88e-10 | 68 |
future brain | 9.88e-10 | 68 |
neural plate | 2.64e-08 | 82 |
presumptive neural plate | 2.64e-08 | 82 |
neurectoderm | 5.98e-08 | 86 |
brainstem | 7.25e-08 | 6 |